MS013713 (gene) Bitter gourd (TR) v1

Overview


Name	MS013713
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	rapid alkalinization factor-like
Location	scaffold263: 379913 .. 380320 (-)
RNA-Seq Expression	MS013713
Synteny	MS013713

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGATTAAAGAAGTGGATTGTATAGACATACCAGGGAGAGCAGAGAGAGCAACAATGGCGGCCAAGGTTTCCTTTCTCCTTCCATTTTGCTTAATCACTGCAATCCTGACTGTCTCCTCCACTGCAGTATTCGCACCCAGCACCGAGAGCCCGAGCTGGGTCCTGGATGGAGCTCGAGCTCGTTGTCACGGCTCCATGGCAGAATGCATGATGGATGAAATTGAATACGAAATGAACTCTGAGATCAATAGACGTATATTGGCAACTTCAAACTACATAAGCTACGAAGCGCTCAAGGCCAACACGGTGCCATGCTCGCGCAGGGGAGCTTCTTACTACAATTGCCAGCCAGGTGCCGAGGCGAACCCCTACGACCGTGGCTGCAGTGCTATTACTCGTTGCCGAAGC

mRNA sequence

AAGATTAAAGAAGTGGATTGTATAGACATACCAGGGAGAGCAGAGAGAGCAACAATGGCGGCCAAGGTTTCCTTTCTCCTTCCATTTTGCTTAATCACTGCAATCCTGACTGTCTCCTCCACTGCAGTATTCGCACCCAGCACCGAGAGCCCGAGCTGGGTCCTGGATGGAGCTCGAGCTCGTTGTCACGGCTCCATGGCAGAATGCATGATGGATGAAATTGAATACGAAATGAACTCTGAGATCAATAGACGTATATTGGCAACTTCAAACTACATAAGCTACGAAGCGCTCAAGGCCAACACGGTGCCATGCTCGCGCAGGGGAGCTTCTTACTACAATTGCCAGCCAGGTGCCGAGGCGAACCCCTACGACCGTGGCTGCAGTGCTATTACTCGTTGCCGAAGC

Coding sequence (CDS)

AAGATTAAAGAAGTGGATTGTATAGACATACCAGGGAGAGCAGAGAGAGCAACAATGGCGGCCAAGGTTTCCTTTCTCCTTCCATTTTGCTTAATCACTGCAATCCTGACTGTCTCCTCCACTGCAGTATTCGCACCCAGCACCGAGAGCCCGAGCTGGGTCCTGGATGGAGCTCGAGCTCGTTGTCACGGCTCCATGGCAGAATGCATGATGGATGAAATTGAATACGAAATGAACTCTGAGATCAATAGACGTATATTGGCAACTTCAAACTACATAAGCTACGAAGCGCTCAAGGCCAACACGGTGCCATGCTCGCGCAGGGGAGCTTCTTACTACAATTGCCAGCCAGGTGCCGAGGCGAACCCCTACGACCGTGGCTGCAGTGCTATTACTCGTTGCCGAAGC

Protein sequence

KIKEVDCIDIPGRAERATMAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEMNSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS

Homology

[Close]

BLAST of MS013713 vs. NCBI nr
Match: XP_022153599.1 (protein RALF-like 33 [Momordica charantia])

HSP 1 Score: 238.8 bits (608), Expect = 2.7e-59
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 19  MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM 78
           MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM
Sbjct: 1   MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM 60

Query: 79  NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 137
           NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS
Sbjct: 61  NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 118

[Close]

BLAST of MS013713 vs. NCBI nr
Match: XP_038896330.1 (protein RALF-like 33 [Benincasa hispida])

HSP 1 Score: 207.6 bits (527), Expect = 6.7e-50
Identity = 101/118 (85.59%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 19  MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM 78
           MAAKVSFLLPF L+ AILTVSSTAV   ST++PSWVLDGARARCHGSMAECMM +IE+EM
Sbjct: 1   MAAKVSFLLPFFLVAAILTVSSTAVLTTSTKTPSWVLDGARARCHGSMAECMMGDIEFEM 60

Query: 79  NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 137
           NS+INRRILA  NYISY+ALKANTVPCSRRGASYYNCQPGAEANPYDRGC+AI+RCRS
Sbjct: 61  NSDINRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYDRGCNAISRCRS 118

[Close]

BLAST of MS013713 vs. NCBI nr
Match: XP_022953165.1 (rapid alkalinization factor-like [Cucurbita moschata])

HSP 1 Score: 193.7 bits (491), Expect = 1.0e-45
Identity = 94/118 (79.66%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 19  MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM 78
           MAAK+SFLLPFC I A LTV STAV A +T+ PSWVLD A A CHGSMA+CMMD+IE++M
Sbjct: 1   MAAKLSFLLPFCFIAAFLTVFSTAVSATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60

Query: 79  NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 137
           +SEINRRILA  NYISY+AL+AN VPCSRRGASYYNCQPGAEANPYDRGCSAI RCRS
Sbjct: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 118

[Close]

BLAST of MS013713 vs. NCBI nr
Match: KAG7014377.1 (Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 193.0 bits (489), Expect = 1.7e-45
Identity = 93/118 (78.81%), Postives = 103/118 (87.29%), Query Frame = 0


Query: 19  MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM 78
           MAAK+SFLLPFC I A LTV ST V A +T+ PSWVLD A A CHGSMA+CMMD+IE++M
Sbjct: 1   MAAKLSFLLPFCFIAAFLTVFSTVVLATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60

Query: 79  NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 137
           +SEINRRILA  NYISY+AL+AN VPCSRRGASYYNCQPGAEANPYDRGCSAI RCRS
Sbjct: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 118

[Close]

BLAST of MS013713 vs. NCBI nr
Match: XP_011659776.1 (rapid alkalinization factor [Cucumis sativus])

HSP 1 Score: 185.3 bits (469), Expect = 3.6e-43
Identity = 91/118 (77.12%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 19  MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM 78
           MA  VSFLLP  L+ AILTVSSTA      ++PSWVLDGA ARCHGSMAECMM++IE++M
Sbjct: 1   MATTVSFLLPIFLLVAILTVSSTA------KTPSWVLDGAHARCHGSMAECMMEDIEFQM 60

Query: 79  NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 137
           +SEINRRILA  NYISY+ALKAN+VPCSR+GASYYNCQPGAEANPYDRGC+AI+RCRS
Sbjct: 61  DSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of MS013713 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.4e-28
Identity = 67/110 (60.91%), Postives = 81/110 (73.64%), Query Frame = 0


Query: 28  PFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMD--EIEYEMNSEINRR 87
           P  +I AILTV    +FA  T   S       ++C+G++AEC +   E E+EM+SEINRR
Sbjct: 8   PVAIIIAILTVH--FLFAAVTSQSSGDFVPIESKCNGTIAECSLSTAEEEFEMDSEINRR 67

Query: 88  ILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCR 136
           ILAT+ YISY AL+ NTVPCSRRGASYYNC+ GA+ANPY RGCSAITRCR
Sbjct: 68  ILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of MS013713 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.9e-27
Identity = 62/111 (55.86%), Postives = 79/111 (71.17%), Query Frame = 0


Query: 27  LPFCLITAILTVSSTAVFAPSTESPSWVLDG-ARARCHGSMAECMMDEIEYEMNSEINRR 86
           L  C++     +S  A  A  + +  WV+   +   C GS+ EC+ +E E+E++SE NRR
Sbjct: 7   LILCVLIGAFFISMAA--AGDSGAYDWVMPARSGGGCKGSIGECIAEEEEFELDSESNRR 66

Query: 87  ILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 137
           ILAT  YISY AL+ N+VPCSRRGASYYNC+PGA+ANPY RGCSAITRCRS
Sbjct: 67  ILATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115

[Close]

BLAST of MS013713 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.4e-26
Identity = 65/109 (59.63%), Postives = 77/109 (70.64%), Query Frame = 0


Query: 32  ITAILTVSSTAV---FAPSTESPSWVLDGAR-ARCHGSMAECMMDEIEYEMNSEINRRIL 91
           I  +  +SS  V   FA      +W   G   + CHGS+AEC+  E E EM+SEINRRIL
Sbjct: 13  ILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAE-EEEMDSEINRRIL 72

Query: 92  ATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 137
           AT+ YISY++LK N+VPCSRRGASYYNCQ GA+ANPY RGCS I RCRS
Sbjct: 73  ATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of MS013713 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.0e-24
Identity = 58/105 (55.24%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 31  LITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEMNSEINRRILATS 90
           L   I  V ST  F  S +          + C GS+AEC+ +E E E +S+I+RRILA  
Sbjct: 14  LAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEMEFDSDISRRILAQK 73

Query: 91  NYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCR 136
            YISY A++ N+VPCSRRGASYYNCQ GA+ANPY RGCS ITRCR
Sbjct: 74  KYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118

[Close]

BLAST of MS013713 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.3e-23
Identity = 63/122 (51.64%), Postives = 77/122 (63.11%), Query Frame = 0


Query: 32  ITAILTVSSTAVFAPSTESPSWVLD--GARARCHGSMAECMMDEI--------------- 91
           I  IL V + +V A S++S  +  D       C G++AEC +                  
Sbjct: 16  ILLILAVHNWSV-AVSSQSTEFAGDFPPFETECRGTIAECSVSAALGDGGDLFYGGGEMG 75

Query: 92  -EYEMNSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITR 136
            E+EM+SEINRRILAT  YISY AL+ NT+PCSRRGASYYNC+ GA+ANPY RGCSAITR
Sbjct: 76  EEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAITR 135

[Close]

BLAST of MS013713 vs. ExPASy TrEMBL
Match: A0A6J1DJJ4 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111021064 PE=3 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.3e-59
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 19  MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM 78
           MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM
Sbjct: 1   MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM 60

Query: 79  NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 137
           NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS
Sbjct: 61  NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 118

[Close]

BLAST of MS013713 vs. ExPASy TrEMBL
Match: A0A6J1GNW5 (rapid alkalinization factor-like OS=Cucurbita moschata OX=3662 GN=LOC111455786 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.9e-46
Identity = 94/118 (79.66%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 19  MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM 78
           MAAK+SFLLPFC I A LTV STAV A +T+ PSWVLD A A CHGSMA+CMMD+IE++M
Sbjct: 1   MAAKLSFLLPFCFIAAFLTVFSTAVSATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60

Query: 79  NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 137
           +SEINRRILA  NYISY+AL+AN VPCSRRGASYYNCQPGAEANPYDRGCSAI RCRS
Sbjct: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 118

[Close]

BLAST of MS013713 vs. ExPASy TrEMBL
Match: A0A0A0K607 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396340 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.7e-43
Identity = 91/118 (77.12%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 19  MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM 78
           MA  VSFLLP  L+ AILTVSSTA      ++PSWVLDGA ARCHGSMAECMM++IE++M
Sbjct: 1   MATTVSFLLPIFLLVAILTVSSTA------KTPSWVLDGAHARCHGSMAECMMEDIEFQM 60

Query: 79  NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 137
           +SEINRRILA  NYISY+ALKAN+VPCSR+GASYYNCQPGAEANPYDRGC+AI+RCRS
Sbjct: 61  DSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of MS013713 vs. ExPASy TrEMBL
Match: A0A5A7VLB3 (Rapid alkalinization factor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00450 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.6e-43
Identity = 91/118 (77.12%), Postives = 103/118 (87.29%), Query Frame = 0


Query: 19  MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM 78
           MAAKVSFLLP  L+ AILTVSSTA       +PSWVL GA ARCHGSMAECM ++IE+EM
Sbjct: 1   MAAKVSFLLPIFLLVAILTVSSTAT------TPSWVLGGAHARCHGSMAECMKEDIEFEM 60

Query: 79  NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 137
           +SEINRRILA  NYISY+AL+AN+VPCSR+GASYYNCQPGAEANPYDRGC+AI+RCRS
Sbjct: 61  DSEINRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of MS013713 vs. ExPASy TrEMBL
Match: A0A1S3BRF1 (rapid alkalinization factor-like OS=Cucumis melo OX=3656 GN=LOC103492893 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.6e-43
Identity = 91/118 (77.12%), Postives = 103/118 (87.29%), Query Frame = 0


Query: 19  MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM 78
           MAAKVSFLLP  L+ AILTVSSTA       +PSWVL GA ARCHGSMAECM ++IE+EM
Sbjct: 1   MAAKVSFLLPIFLLVAILTVSSTAT------TPSWVLGGAHARCHGSMAECMKEDIEFEM 60

Query: 79  NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 137
           +SEINRRILA  NYISY+AL+AN+VPCSR+GASYYNCQPGAEANPYDRGC+AI+RCRS
Sbjct: 61  DSEINRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of MS013713 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 125.9 bits (315), Expect = 2.4e-29
Identity = 67/110 (60.91%), Postives = 81/110 (73.64%), Query Frame = 0


Query: 28  PFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMD--EIEYEMNSEINRR 87
           P  +I AILTV    +FA  T   S       ++C+G++AEC +   E E+EM+SEINRR
Sbjct: 8   PVAIIIAILTVH--FLFAAVTSQSSGDFVPIESKCNGTIAECSLSTAEEEFEMDSEINRR 67

Query: 88  ILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCR 136
           ILAT+ YISY AL+ NTVPCSRRGASYYNC+ GA+ANPY RGCSAITRCR
Sbjct: 68  ILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of MS013713 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 120.6 bits (301), Expect = 1.0e-27
Identity = 65/109 (59.63%), Postives = 77/109 (70.64%), Query Frame = 0


Query: 32  ITAILTVSSTAV---FAPSTESPSWVLDGAR-ARCHGSMAECMMDEIEYEMNSEINRRIL 91
           I  +  +SS  V   FA      +W   G   + CHGS+AEC+  E E EM+SEINRRIL
Sbjct: 13  ILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAE-EEEMDSEINRRIL 72

Query: 92  ATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 137
           AT+ YISY++LK N+VPCSRRGASYYNCQ GA+ANPY RGCS I RCRS
Sbjct: 73  ATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of MS013713 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 112.8 bits (281), Expect = 2.1e-25
Identity = 58/105 (55.24%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 31  LITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEMNSEINRRILATS 90
           L   I  V ST  F  S +          + C GS+AEC+ +E E E +S+I+RRILA  
Sbjct: 14  LAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEMEFDSDISRRILAQK 73

Query: 91  NYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCR 136
            YISY A++ N+VPCSRRGASYYNCQ GA+ANPY RGCS ITRCR
Sbjct: 74  KYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118

[Close]

BLAST of MS013713 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-24
Identity = 63/122 (51.64%), Postives = 77/122 (63.11%), Query Frame = 0


Query: 32  ITAILTVSSTAVFAPSTESPSWVLD--GARARCHGSMAECMMDEI--------------- 91
           I  IL V + +V A S++S  +  D       C G++AEC +                  
Sbjct: 16  ILLILAVHNWSV-AVSSQSTEFAGDFPPFETECRGTIAECSVSAALGDGGDLFYGGGEMG 75

Query: 92  -EYEMNSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITR 136
            E+EM+SEINRRILAT  YISY AL+ NT+PCSRRGASYYNC+ GA+ANPY RGCSAITR
Sbjct: 76  EEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAITR 135

[Close]

BLAST of MS013713 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 82.4 bits (202), Expect = 3.0e-16
Identity = 50/104 (48.08%), Postives = 63/104 (60.58%), Query Frame = 0


Query: 32  ITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEMNSEINRRILAT-S 91
           I  IL + + AV A S  + +W L  +     G + E    E++Y M+SE NRR LA   
Sbjct: 5   ILLILGLLTLAVVAESANA-TWTLTKSCVNGQGCIGE--DGELDYLMDSETNRRQLAARR 64

Query: 92  NYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRC 135
           +YISY AL+ N VPCSRRG SYY+C+    ANPY RGCS IT C
Sbjct: 65  SYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHC 105

The following BLAST results are available for this feature:

BLAST of MS013713 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153599.1	2.7e-59	100.00	protein RALF-like 33 [Momordica charantia]	[more]
XP_038896330.1	6.7e-50	85.59	protein RALF-like 33 [Benincasa hispida]	[more]
XP_022953165.1	1.0e-45	79.66	rapid alkalinization factor-like [Cucurbita moschata]	[more]
KAG7014377.1	1.7e-45	78.81	Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_011659776.1	3.6e-43	77.12	rapid alkalinization factor [Cucumis sativus]	[more]

BLAST of MS013713 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9P8	3.4e-28	60.91	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q945T0	4.9e-27	55.86	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q9SRY3	1.4e-26	59.63	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
Q9MA62	3.0e-24	55.24	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]
Q9LUS7	4.3e-23	51.64	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]

BLAST of MS013713 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJJ4	1.3e-59	100.00	protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111021064 PE=3 SV=1	[more]
A0A6J1GNW5	4.9e-46	79.66	rapid alkalinization factor-like OS=Cucurbita moschata OX=3662 GN=LOC111455786 P...	[more]
A0A0A0K607	1.7e-43	77.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396340 PE=3 SV=1	[more]
A0A5A7VLB3	6.6e-43	77.12	Rapid alkalinization factor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BRF1	6.6e-43	77.12	rapid alkalinization factor-like OS=Cucumis melo OX=3656 GN=LOC103492893 PE=3 SV...	[more]

BLAST of MS013713 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15800.1	2.4e-29	60.91	ralf-like 33	[more]
AT1G02900.1	1.0e-27	59.63	rapid alkalinization factor 1	[more]
AT3G05490.1	2.1e-25	55.24	ralf-like 22	[more]
AT3G16570.1	3.0e-24	51.64	rapid alkalinization factor 23	[more]
AT2G33775.1	3.0e-16	48.08	ralf-like 19	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 75..135 e-value: 3.7E-28 score: 98.3
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 24..136
None	No IPR available	PANTHER	PTHR33136:SF50	PROTEIN RALF-LIKE 33	coord: 24..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013713.1	MS013713.1	mRNA