MS013612 (gene) Bitter gourd (TR) v1

Overview
NameMS013612
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationscaffold402: 2821798 .. 2823731 (+)
RNA-Seq ExpressionMS013612
SyntenyMS013612
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCAGAACCTCTTCTCCAAAGCCTTAACACGCTATGCTATGGCTGGCCGATCTTATCACACTAATCGGATGAAAAAGGCGACTCTGTATGCGAAAATTAGTCCACTGGGCGATCCTAGCATCAGCGTGGGGCCGGAGCTCGACGGCTGGGTCCAGGAGGGGAAGAAGATCCGAGTCGCTGAGCTTCAGAGAATCATTCACGACCTTCGCAAGCGCAAGCGTTTTACCCAAGCTCTTGAGGTTTGAATTCTTCTTTCCTGAAATGTGCTTTGTTTCGATTGGAGGAAGAAGTGAATGATACAAAGTGATGCATCAAGTTAGAGCTGAGTGCCTTTTAGATGAGCCACACTTCTGAAGTGTGCATAGCCTAATCGCTAACTTCGAAATGAGGATCATGGCGAATGAGGTCATATCGATAGATTTGGCATGGGGAGATGGAAGGCACTTGGCTTTTCCATGTGCTTTGCTCGACTAGCTTTATCATCAGTTCACGAAATATGGACTTCCAGCGATGAAATCATGTCTTTTCTCCCCCCATTAATTTCACTTGCTTGAAATTTTAGTATTTGTGGATAGTGATAGAATGACTGAAACATTATTATGAGCTGGAAATATGTGGATTTGGACAATTTTTTGGTGGATTTCTTTGTAATTGATGATGGACGTTAATGCAGGTGTCCGAATGGATGAAGCAAAGCGGCGTCTGCATATTTTCACCAAGCGAACATGCAGTGCAATTGGATCTGATTGGCCGAGTTCGTGGATATCTTTCTGCCGAAAGCTATTTTGATCAGTTGAAGGACCAAGACAAGACTGGTAAGACATATGGTGCTCTCCTGAATTGCTACGTTCGGCAGCGGCAAGTTGATAAATCCCTCTCCCATTTACAAAAAATGAAAGAGATGGGTTTTGCAACTTCAGAGCTCACTTACAATGACATGATGTGCTTGTATACAAACGTTGGTCAGCATGACAAGGTCCCTCAGGTCCTAGCAGAGATGAAGGAGAATAAAGTTTCCCCCGACAACTTCAGCTACAGAATCTGCATCAATTCGTATGGTACGAGATGCGATCTTGAGGGGATGGAGAGTGTATTGAAAGAGATGGAATCTCAACCTCACATTGTCATGGACTGGAACACTTATGCAGTAGTTGCAAACTTCTTCATAAAAGGGGGTCTTACTGATAAGGCAGTTGATGCCTTGAGAAAATCAGAAGAGAGACTGAACAGTAAAGACAGAATTGGCCACAATCATCTGATCTCACTTTACGCGACATTAGGTAACAAGGAGGAGGTGTTGAGATTGTGGAAACTGGATAAAAGTGATTCTACGAGATTCATCAATAGGGACTATATTACAATGCTTGAATCTCTGGTGAGACTGGGTGAACTTGAAGAAGCTGAAAAAGTACTGAAAGAGTGGGAATCATCTGGGAATTGCTATGATTTTCGAGTTCCTAACACTGTCATTGTTGGGTATATTGACAAGGGAATGTGCGAGAGAGCCGAAGCCCTGCTTGAAGACTTGATGAAGGAAGGAAAGGCTACCACACCCAACAGTTGGGGTGCTGTGGCTGTTCAATATCTGGACAGGGGAGAGACTGAGAAAGCTGTAGAGTGCATGAAGACAGCCCTCTCTCTACATATCGATAAAGGATGGAAGCCTAATCTTCGTGTGATCACAGGCATATTGAATTGGATAGGAGATAACAGCAGCACTGAAGAAGTAGAAGCTTTTGTAGGCTCATTGAGGTCTGTCATTCCAGTGAATAGAGAGATGTATCATGCCTTGATGAAGGCTCATATAAGAGGTGGTAAAGAAGTCCATGGGCTGTTAAGTCAAATGAAGTCTGATCAAATAGATGAAGATGAGGAGACAGAGAAAATTCTTGGCACTTGGCAAGAAGCAACTGAAGGTAAGAGCATTGGC

mRNA sequence

ATGGATCAGAACCTCTTCTCCAAAGCCTTAACACGCTATGCTATGGCTGGCCGATCTTATCACACTAATCGGATGAAAAAGGCGACTCTGTATGCGAAAATTAGTCCACTGGGCGATCCTAGCATCAGCGTGGGGCCGGAGCTCGACGGCTGGGTCCAGGAGGGGAAGAAGATCCGAGTCGCTGAGCTTCAGAGAATCATTCACGACCTTCGCAAGCGCAAGCGTTTTACCCAAGCTCTTGAGGTGTCCGAATGGATGAAGCAAAGCGGCGTCTGCATATTTTCACCAAGCGAACATGCAGTGCAATTGGATCTGATTGGCCGAGTTCGTGGATATCTTTCTGCCGAAAGCTATTTTGATCAGTTGAAGGACCAAGACAAGACTGGTAAGACATATGGTGCTCTCCTGAATTGCTACGTTCGGCAGCGGCAAGTTGATAAATCCCTCTCCCATTTACAAAAAATGAAAGAGATGGGTTTTGCAACTTCAGAGCTCACTTACAATGACATGATGTGCTTGTATACAAACGTTGGTCAGCATGACAAGGTCCCTCAGGTCCTAGCAGAGATGAAGGAGAATAAAGTTTCCCCCGACAACTTCAGCTACAGAATCTGCATCAATTCGTATGGTACGAGATGCGATCTTGAGGGGATGGAGAGTGTATTGAAAGAGATGGAATCTCAACCTCACATTGTCATGGACTGGAACACTTATGCAGTAGTTGCAAACTTCTTCATAAAAGGGGGTCTTACTGATAAGGCAGTTGATGCCTTGAGAAAATCAGAAGAGAGACTGAACAGTAAAGACAGAATTGGCCACAATCATCTGATCTCACTTTACGCGACATTAGGTAACAAGGAGGAGGTGTTGAGATTGTGGAAACTGGATAAAAGTGATTCTACGAGATTCATCAATAGGGACTATATTACAATGCTTGAATCTCTGGTGAGACTGGGTGAACTTGAAGAAGCTGAAAAAGTACTGAAAGAGTGGGAATCATCTGGGAATTGCTATGATTTTCGAGTTCCTAACACTGTCATTGTTGGGTATATTGACAAGGGAATGTGCGAGAGAGCCGAAGCCCTGCTTGAAGACTTGATGAAGGAAGGAAAGGCTACCACACCCAACAGTTGGGGTGCTGTGGCTGTTCAATATCTGGACAGGGGAGAGACTGAGAAAGCTGTAGAGTGCATGAAGACAGCCCTCTCTCTACATATCGATAAAGGATGGAAGCCTAATCTTCGTGTGATCACAGGCATATTGAATTGGATAGGAGATAACAGCAGCACTGAAGAAGTAGAAGCTTTTGTAGGCTCATTGAGGTCTGTCATTCCAGTGAATAGAGAGATGTATCATGCCTTGATGAAGGCTCATATAAGAGGTGGTAAAGAAGTCCATGGGCTGTTAAGTCAAATGAAGTCTGATCAAATAGATGAAGATGAGGAGACAGAGAAAATTCTTGGCACTTGGCAAGAAGCAACTGAAGGTAAGAGCATTGGC

Coding sequence (CDS)

ATGGATCAGAACCTCTTCTCCAAAGCCTTAACACGCTATGCTATGGCTGGCCGATCTTATCACACTAATCGGATGAAAAAGGCGACTCTGTATGCGAAAATTAGTCCACTGGGCGATCCTAGCATCAGCGTGGGGCCGGAGCTCGACGGCTGGGTCCAGGAGGGGAAGAAGATCCGAGTCGCTGAGCTTCAGAGAATCATTCACGACCTTCGCAAGCGCAAGCGTTTTACCCAAGCTCTTGAGGTGTCCGAATGGATGAAGCAAAGCGGCGTCTGCATATTTTCACCAAGCGAACATGCAGTGCAATTGGATCTGATTGGCCGAGTTCGTGGATATCTTTCTGCCGAAAGCTATTTTGATCAGTTGAAGGACCAAGACAAGACTGGTAAGACATATGGTGCTCTCCTGAATTGCTACGTTCGGCAGCGGCAAGTTGATAAATCCCTCTCCCATTTACAAAAAATGAAAGAGATGGGTTTTGCAACTTCAGAGCTCACTTACAATGACATGATGTGCTTGTATACAAACGTTGGTCAGCATGACAAGGTCCCTCAGGTCCTAGCAGAGATGAAGGAGAATAAAGTTTCCCCCGACAACTTCAGCTACAGAATCTGCATCAATTCGTATGGTACGAGATGCGATCTTGAGGGGATGGAGAGTGTATTGAAAGAGATGGAATCTCAACCTCACATTGTCATGGACTGGAACACTTATGCAGTAGTTGCAAACTTCTTCATAAAAGGGGGTCTTACTGATAAGGCAGTTGATGCCTTGAGAAAATCAGAAGAGAGACTGAACAGTAAAGACAGAATTGGCCACAATCATCTGATCTCACTTTACGCGACATTAGGTAACAAGGAGGAGGTGTTGAGATTGTGGAAACTGGATAAAAGTGATTCTACGAGATTCATCAATAGGGACTATATTACAATGCTTGAATCTCTGGTGAGACTGGGTGAACTTGAAGAAGCTGAAAAAGTACTGAAAGAGTGGGAATCATCTGGGAATTGCTATGATTTTCGAGTTCCTAACACTGTCATTGTTGGGTATATTGACAAGGGAATGTGCGAGAGAGCCGAAGCCCTGCTTGAAGACTTGATGAAGGAAGGAAAGGCTACCACACCCAACAGTTGGGGTGCTGTGGCTGTTCAATATCTGGACAGGGGAGAGACTGAGAAAGCTGTAGAGTGCATGAAGACAGCCCTCTCTCTACATATCGATAAAGGATGGAAGCCTAATCTTCGTGTGATCACAGGCATATTGAATTGGATAGGAGATAACAGCAGCACTGAAGAAGTAGAAGCTTTTGTAGGCTCATTGAGGTCTGTCATTCCAGTGAATAGAGAGATGTATCATGCCTTGATGAAGGCTCATATAAGAGGTGGTAAAGAAGTCCATGGGCTGTTAAGTCAAATGAAGTCTGATCAAATAGATGAAGATGAGGAGACAGAGAAAATTCTTGGCACTTGGCAAGAAGCAACTGAAGGTAAGAGCATTGGC

Protein sequence

MDQNLFSKALTRYAMAGRSYHTNRMKKATLYAKISPLGDPSISVGPELDGWVQEGKKIRVAELQRIIHDLRKRKRFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFDQLKDQDKTGKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKVPQVLAEMKENKVSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAVVANFFIKGGLTDKAVDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDSTRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMKEGKATTPNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKGWKPNLRVITGILNWIGDNSSTEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLLSQMKSDQIDEDEETEKILGTWQEATEGKSIG
Homology
BLAST of MS013612 vs. NCBI nr
Match: XP_022139928.1 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial [Momordica charantia])

HSP 1 Score: 1012.7 bits (2617), Expect = 1.1e-291
Identity = 499/500 (99.80%), Postives = 500/500 (100.00%), Query Frame = 0

Query: 1   MDQNLFSKALTRYAMAGRSYHTNRMKKATLYAKISPLGDPSISVGPELDGWVQEGKKIRV 60
           MDQNLFSKALTRYAMAGRSYHTNRMKKATLYAKISPLGDPSISVGPELDGWVQEGKKIRV
Sbjct: 10  MDQNLFSKALTRYAMAGRSYHTNRMKKATLYAKISPLGDPSISVGPELDGWVQEGKKIRV 69

Query: 61  AELQRIIHDLRKRKRFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFD 120
           AELQRIIHDLRKRKRFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFD
Sbjct: 70  AELQRIIHDLRKRKRFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFD 129

Query: 121 QLKDQDKTGKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180
           QLKDQDKTGKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH
Sbjct: 130 QLKDQDKTGKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 189

Query: 181 DKVPQVLAEMKENKVSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAV 240
           DKVPQVLAEMKENKVSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAV
Sbjct: 190 DKVPQVLAEMKENKVSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAV 249

Query: 241 VANFFIKGGLTDKAVDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDS 300
           VANFFIKGGLTDKAVDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDS
Sbjct: 250 VANFFIKGGLTDKAVDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDS 309

Query: 301 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 310 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 369

Query: 361 ALLEDLMKEGKATTPNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKGWKPNLRVITGI 420
           ALLEDLMKEGKATTPNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKGWKPNLRVITGI
Sbjct: 370 ALLEDLMKEGKATTPNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKGWKPNLRVITGI 429

Query: 421 LNWIGDNSSTEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLLSQMKSDQIDED 480
           LNWIGDNSSTEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLLSQMKSDQIDED
Sbjct: 430 LNWIGDNSSTEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLLSQMKSDQIDED 489

Query: 481 EETEKILGTWQEATEGKSIG 501
           EET+KILGTWQEATEGKSIG
Sbjct: 490 EETKKILGTWQEATEGKSIG 509

BLAST of MS013612 vs. NCBI nr
Match: XP_023542644.1 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 909.1 bits (2348), Expect = 1.7e-260
Identity = 441/495 (89.09%), Postives = 476/495 (96.16%), Query Frame = 0

Query: 1   MDQNLFSKALTRYAMAGRSYHTNRMKKATLYAKISPLGDPSISVGPELDGWVQEGKKIRV 60
           MDQ  FSKALTRYA+AGR YHTNR+KKATLYAKISPLGDPS+SV PELDGWV+EGKK+R+
Sbjct: 1   MDQ-FFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPELDGWVKEGKKVRI 60

Query: 61  AELQRIIHDLRKRKRFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFD 120
           AELQRIIHDLRKRKRFTQALEVSEWMK++GVCIFSPSEHAVQLDLIGRVRGYLSAESYF+
Sbjct: 61  AELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFN 120

Query: 121 QLKDQDKTGKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180
           QLK+QD+T KTYGALLNCYVRQRQV+KSLSHLQKMKEMGFATSELT+NDMMCLYTNVGQH
Sbjct: 121 QLKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTFNDMMCLYTNVGQH 180

Query: 181 DKVPQVLAEMKENKVSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAV 240
           DKVP+VLAEMKE  +SPDNFSYRICINSYG R DLEGME+VLKEMESQPHIVMDWNTYAV
Sbjct: 181 DKVPEVLAEMKEKNISPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKGGLTDKAVDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDS 300
           VANFFIK  LT+KAVDALRK+EERL SKDRIGHNHLISLYATLGNKE+VLRLW LDK+D+
Sbjct: 241 VANFFIKADLTEKAVDALRKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDA 300

Query: 301 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 ALLEDLMKEGKATTPNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKGWKPNLRVITGI 420
           ALLEDLM++GK TTPNSWGAVAVQY+DRGETEK+VECMK AL+L++DKGWKPNLRVITGI
Sbjct: 361 ALLEDLMEKGKTTTPNSWGAVAVQYMDRGETEKSVECMKAALTLNMDKGWKPNLRVITGI 420

Query: 421 LNWIGDNSSTEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLLSQMKSDQIDED 480
           LNW+G+N+S EEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVH LL+QMKSD++DED
Sbjct: 421 LNWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKLDED 480

Query: 481 EETEKILGTWQEATE 496
           EET+KILGT QE TE
Sbjct: 481 EETKKILGTGQETTE 494

BLAST of MS013612 vs. NCBI nr
Match: XP_022994385.1 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 906.4 bits (2341), Expect = 1.1e-259
Identity = 440/498 (88.35%), Postives = 474/498 (95.18%), Query Frame = 0

Query: 1   MDQNLFSKALTRYAMAGRSYHTNRMKKATLYAKISPLGDPSISVGPELDGWVQEGKKIRV 60
           MDQ  FSKALTRYA+A R YHTNR+KKATLYAKISPLGDP++SV PELDGWV+EGKK+R+
Sbjct: 1   MDQ-FFSKALTRYALADRFYHTNRLKKATLYAKISPLGDPNVSVEPELDGWVKEGKKVRI 60

Query: 61  AELQRIIHDLRKRKRFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFD 120
           AELQRIIHDLRKRKRFTQALEVSEWMK++GVCIFSPSEHAVQLDLIGRVRGYLSAESYF+
Sbjct: 61  AELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFN 120

Query: 121 QLKDQDKTGKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180
           QLK+QD+T KTYGALLNCYVRQRQV+KSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH
Sbjct: 121 QLKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180

Query: 181 DKVPQVLAEMKENKVSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAV 240
           DKVP+VLAEMKE  VSPDNFSYRICINSYG R DLEGME+VLKEMESQPHIVMDWNTYAV
Sbjct: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKGGLTDKAVDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDS 300
           VANFFIK  L DKAVDAL+K+EERL SKDRIGHNHLISLY TLGNKE+VLRLW LDK+D+
Sbjct: 241 VANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYTTLGNKEKVLRLWNLDKTDT 300

Query: 301 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 ALLEDLMKEGKATTPNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKGWKPNLRVITGI 420
           ALLEDLM++GK TTPNSWGAVAVQY+DRGETEK+VECMK AL+L++DKGWKPNLRVITGI
Sbjct: 361 ALLEDLMEKGKTTTPNSWGAVAVQYMDRGETEKSVECMKAALTLNMDKGWKPNLRVITGI 420

Query: 421 LNWIGDNSSTEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLLSQMKSDQIDED 480
           LNW+G+N+S EEVEAFVGSLRS IPVNREMYHALMK HIRGGKEVH LL+QMKSD+IDED
Sbjct: 421 LNWLGENASIEEVEAFVGSLRSAIPVNREMYHALMKVHIRGGKEVHELLNQMKSDKIDED 480

Query: 481 EETEKILGTWQEATEGKS 499
           EET+KILGT QE TEG+S
Sbjct: 481 EETKKILGTGQETTEGRS 497

BLAST of MS013612 vs. NCBI nr
Match: XP_022954890.1 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 904.0 bits (2335), Expect = 5.6e-259
Identity = 441/499 (88.38%), Postives = 473/499 (94.79%), Query Frame = 0

Query: 1   MDQNLFSKALTRYAMAGRSYHTNRMKKATLYAKISPLGDPSISVGPELDGWVQEGKKIRV 60
           MDQ  FSKALTRYA+AGR YHTNR+KKATLYAKISPLGDPS+SV P LDGWV+EGKK+R+
Sbjct: 1   MDQ-FFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRI 60

Query: 61  AELQRIIHDLRKRKRFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFD 120
           AELQRIIHDLRKRKRFTQALEVSEWMK++GVCIFSPSEHAVQLDLIGRVRGYLSAESYF+
Sbjct: 61  AELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFN 120

Query: 121 QLKDQDKTGKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180
           QLK+QD+T KTYGALLNCYVRQRQV+KSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH
Sbjct: 121 QLKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180

Query: 181 DKVPQVLAEMKENKVSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAV 240
           DKVP+VLAEMKE  VSPDNFSYRICINSYG R DLEGME+VLKEMESQPHIVMDWNTYAV
Sbjct: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKGGLTDKAVDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDS 300
           VANFFIK  L DKAVDAL+K+EERL SKDRIGHNHLISLYATLGNKE+VLRLW LDK+D+
Sbjct: 241 VANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDT 300

Query: 301 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TR INRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 ALLEDLMKEGKATTPNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKGWKPNLRVITGI 420
           ALLEDLM++GK TTPN WGAVAVQY+DR ETEK+VECMK AL+L++DKGWKPNLRVITGI
Sbjct: 361 ALLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGI 420

Query: 421 LNWIGDNSSTEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLLSQMKSDQIDED 480
           LNW+G+N+S EEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVH LL+QMKSD+IDED
Sbjct: 421 LNWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDED 480

Query: 481 EETEKILGTWQEATEGKSI 500
           EET+KILGT QE TEG  I
Sbjct: 481 EETKKILGTGQETTEGDLI 498

BLAST of MS013612 vs. NCBI nr
Match: KAG7012430.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 901.7 bits (2329), Expect = 2.8e-258
Identity = 439/495 (88.69%), Postives = 471/495 (95.15%), Query Frame = 0

Query: 1   MDQNLFSKALTRYAMAGRSYHTNRMKKATLYAKISPLGDPSISVGPELDGWVQEGKKIRV 60
           MDQ  FSKALTRYA+AGR YHTNR+KKATLYAKISPLGDPS+SV P LDGWV+EGKK+R+
Sbjct: 1   MDQ-FFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRI 60

Query: 61  AELQRIIHDLRKRKRFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFD 120
           AELQRIIHDLRKRKRFTQALEVSEWMK++GVCIFSPSEHAVQLDLIGRVRGYLSAESYF+
Sbjct: 61  AELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFN 120

Query: 121 QLKDQDKTGKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180
           QLK+QD+T KTYGALLNCYVRQRQV+KSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH
Sbjct: 121 QLKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180

Query: 181 DKVPQVLAEMKENKVSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAV 240
           DKVP+VLAEMKE  VSPDNFSYRICINSYG R DLEGME+VLKEMESQPHIVMDWNTYAV
Sbjct: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKGGLTDKAVDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDS 300
           VANFFIK  L DKAVDAL+K+EERL SKDRIGHNHLISLYATLGNKE+VLRLW LDK+D+
Sbjct: 241 VANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDT 300

Query: 301 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TR INRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 ALLEDLMKEGKATTPNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKGWKPNLRVITGI 420
           ALLEDLM++GK TTPNSWGAVAVQY+DR ETEK+VECMK AL+L++DKGWKPNLRVITGI
Sbjct: 361 ALLEDLMEKGKTTTPNSWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGI 420

Query: 421 LNWIGDNSSTEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLLSQMKSDQIDED 480
           LNW+G+N S EEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVH LL+QMKSD++DED
Sbjct: 421 LNWLGENGSIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKLDED 480

Query: 481 EETEKILGTWQEATE 496
           EET+KILGT QE TE
Sbjct: 481 EETKKILGTGQETTE 494

BLAST of MS013612 vs. ExPASy Swiss-Prot
Match: Q84JR3 (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 1.0e-175
Identity = 297/477 (62.26%), Postives = 371/477 (77.78%), Query Frame = 0

Query: 15  MAGRSYHTNRMKKATLYAKISPLGDPSISVGPELDGWVQEGKKIRVAELQRIIHDLRKRK 74
           +A R Y+TNR+KK TLY+KISPLGDP  SV PEL  WVQ GKK+ VAEL RI+HDLR+RK
Sbjct: 12  IASRYYYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRK 71

Query: 75  RFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFDQLKDQDKTGKTYGA 134
           RF  ALEVS+WM ++GVC+FSP+EHAV LDLIGRV G+++AE YF+ LK+Q K  KTYGA
Sbjct: 72  RFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGA 131

Query: 135 LLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKVPQVLAEMKENK 194
           LLNCYVRQ+ V+KSL H +KMKEMGF TS LTYN++MCLYTN+GQH+KVP+VL EMKE  
Sbjct: 132 LLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEEN 191

Query: 195 VSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAVVANFFIKGGLTDKA 254
           V+PDN+SYRICIN++G   DLE +   L++ME +  I MDWNTYAV A F+I GG  D+A
Sbjct: 192 VAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRA 251

Query: 255 VDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDSTRFINRDYITMLES 314
           V+ L+ SE RL  KD  G+NHLI+LYA LG K EVLRLW L+K    R IN+DY+T+L+S
Sbjct: 252 VELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQS 311

Query: 315 LVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMKEGKATT 374
           LV++  L EAE+VL EW+SSGNCYDFRVPNTVI GYI K M E+AEA+LEDL + GKATT
Sbjct: 312 LVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATT 371

Query: 375 PNSWGAVAVQYLDRGETEKAVECMKTALSLHI-DKGWKPNLRVITGILNWIGDNSSTEEV 434
           P SW  VA  Y ++G  E A +CMKTAL + +  + W+P L ++T +L+W+GD  S +EV
Sbjct: 372 PESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEV 431

Query: 435 EAFVGSLRSVIPVNREMYHALMKAHIR-GGKEVHGLLSQMKSDQIDEDEETEKILGT 490
           E+FV SLR+ I VN++MYHAL+KA IR GG+ +  LL +MK D+I+ DEET  IL T
Sbjct: 432 ESFVASLRNCIGVNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVILST 488

BLAST of MS013612 vs. ExPASy Swiss-Prot
Match: Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 6.3e-80
Identity = 150/397 (37.78%), Postives = 244/397 (61.46%), Query Frame = 0

Query: 29  TLYAKISPLGDPSISVGPELDGWVQEGKKIRVAELQRIIHDLRKRKRFTQALEVSEWMKQ 88
           TL  +++  GDPS S+   LDGW+ +G  ++ +EL  II  LRK  RF+ AL++S+WM +
Sbjct: 39  TLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSE 98

Query: 89  SGVCIFSPSEHAVQLDLIGRVRGYLSAESYFDQLKDQDKTGKTYGALLNCYVRQRQVDKS 148
             V   S  + A++LDLI +V G   AE +F+ +  + +    YGALLNCY  ++ + K+
Sbjct: 99  HRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKA 158

Query: 149 LSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKVPQVLAEMKENKVSPDNFSYRICINS 208
               Q+MKE+GF    L YN M+ LY   G++  V ++L EM++  V PD F+    +++
Sbjct: 159 EQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHA 218

Query: 209 YGTRCDLEGMESVLKEMESQPHIVMDWNTYAVVANFFIKGGLTDKAVDALRKSEERLNS- 268
           Y    D+EGME  L   E+   + +DW TYA  AN +IK GLT+KA++ LRKSE+ +N+ 
Sbjct: 219 YSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQ 278

Query: 269 KDRIGHNHLISLYATLGNKEEVLRLWKLDKSDSTRFINRDYITMLESLVRLGELEEAEKV 328
           K +  +  L+S Y   G KEEV RLW L K +   F N  YI+++ +L+++ ++EE EK+
Sbjct: 279 KRKHAYEVLMSFYGAAGKKEEVYRLWSLYK-ELDGFYNTGYISVISALLKMDDIEEVEKI 338

Query: 329 LKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMKEGKATTPNSWGAVAVQYLD 388
           ++EWE+  + +D R+P+ +I GY  KGM E+AE ++  L+++ +    ++W  +A+ Y  
Sbjct: 339 MEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKM 398

Query: 389 RGETEKAVECMKTALSLHIDKGWKPNLRVITGILNWI 425
            G+ EKAVE  K A+ +    GW+P+  V+   ++++
Sbjct: 399 AGKMEKAVEKWKRAIEVS-KPGWRPHQVVLMSCVDYL 433

BLAST of MS013612 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 297.7 bits (761), Expect = 2.4e-79
Identity = 161/455 (35.38%), Postives = 258/455 (56.70%), Query Frame = 0

Query: 30  LYAKISPLGDPSISVGPELDGWVQEGKKIRVAELQRIIHDLRKRKRFTQALEVSEWMKQS 89
           +Y KIS +  P +     L+ W + G+K+   EL R++ +LRK KR  QALEV +WM   
Sbjct: 69  IYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNR 128

Query: 90  GVCI-FSPSEHAVQLDLIGRVRGYLSAESYFDQLKDQDKTGKTYGALLNCYVRQRQVDKS 149
           G     S S+ A+QLDLIG+VRG   AE +F QL +  K  + YG+LLN YVR +  +K+
Sbjct: 129 GERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKA 188

Query: 150 LSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKVPQVLAEMKENKVSPDNFSYRICINS 209
            + L  M++ G+A   L +N MM LY N+ ++DKV  ++ EMK+  +  D +SY I ++S
Sbjct: 189 EALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSS 248

Query: 210 YGTRCDLEGMESVLKEMESQPHIVMDWNTYAVVANFFIKGGLTDKAVDALRKSEERLNSK 269
            G+   +E ME V ++M+S   I  +W T++ +A  +IK G T+KA DALRK E R+  +
Sbjct: 249 CGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGR 308

Query: 270 DRIGHNHLISLYATLGNKEEVLRLWKLDKSDSTRFINRDYITMLESLVRLGELEEAEKVL 329
           +RI +++L+SLY +LGNK+E+ R+W + KS      N  Y  ++ SLVR+G++E AEKV 
Sbjct: 309 NRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVY 368

Query: 330 KEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMKEGKATTPNSWGAVAVQYLDR 389
           +EW    + YD R+PN ++  Y+     E AE L + +++ G   + ++W  +AV +  +
Sbjct: 369 EEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRK 428

Query: 390 GETEKAVECMKTALSLHIDKGWKPNLRVITGILNWIGDNSSTEEVEAFVGSLRSVIPVNR 449
               +A+ C++ A S      W+P + +++G      + S     EA +  LR    +  
Sbjct: 429 RCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLED 488

Query: 450 EMYHALMKAHIR--------GGKEVHGLLSQMKSD 476
           + Y AL+                E   LL+Q++ D
Sbjct: 489 KSYLALIDVDENRTVNNSEIDAHETDALLTQLQDD 523

BLAST of MS013612 vs. ExPASy Swiss-Prot
Match: Q93WC5 (Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g01990 PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.5e-73
Identity = 156/473 (32.98%), Postives = 260/473 (54.97%), Query Frame = 0

Query: 16  AGRSYHTNRMKKATLYAKISPLGDPSISVGPE-LDGWVQEGKKIRVAELQRIIHDLRKRK 75
           A  S  T   K  ++Y K+S LG        E L+ +V EG  ++  +L R   DLRK +
Sbjct: 27  AAASVPTKAKKHRSIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFR 86

Query: 76  RFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFDQLKDQDKTGKTYGA 135
           +  +ALE+ EWM++  +  F+ S+HA++L+LI + +G  +AE+YF+ L D  K   TYG+
Sbjct: 87  QPQRALEIFEWMERKEIA-FTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGS 146

Query: 136 LLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKVPQVLAEMKENK 195
           LLNCY  +++  K+ +H + M ++   ++ L +N++M +Y  +GQ +KVP ++  MKE  
Sbjct: 147 LLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKS 206

Query: 196 VSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAVVANFFIKGGLTDKA 255
           ++P + +Y + I S G+  DL+G+E VL EM+++   +  WNT+A +A  +IK GL  KA
Sbjct: 207 ITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKA 266

Query: 256 VDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDSTRFINRDYITMLES 315
            +AL+  E  +N   R  ++ LI+LY  + N  EV R+W L K       N  Y+TML +
Sbjct: 267 EEALKSLENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRA 326

Query: 316 LVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMKEGKATT 375
           L +L +++  +KV  EWES+   YD R+ N  I  Y+ + M E AEA+    MK+ K   
Sbjct: 327 LSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQF 386

Query: 376 PNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKGWKPNLRVITGILNWIGDNSSTEEVE 435
             +   + +  L   + + A++  + A+ L  DK W  +  +I+       +    +  E
Sbjct: 387 SKARQLLMMHLLKNDQADLALKHFEAAV-LDQDKNWTWSSELISSFFLHFEEAKDVDGAE 446

Query: 436 AFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLLSQMKSDQIDEDEETEKIL 488
            F  +L    P++ E Y  LMK ++  GK    +  +++   I  DEE E +L
Sbjct: 447 EFCKTLTKWSPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQECLL 497

BLAST of MS013612 vs. ExPASy Swiss-Prot
Match: Q9SY07 (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.8e-69
Identity = 142/438 (32.42%), Postives = 251/438 (57.31%), Query Frame = 0

Query: 51  WVQEGKKIRVAELQRIIHDLRKRKRFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVR 110
           W +EG  +R  EL RI+ +LRK KR+  ALE+ EWM           ++AV LDLI ++R
Sbjct: 84  WKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIR 143

Query: 111 GYLSAESYFDQLKDQDKTGKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDM 170
           G  SAE +F+ + DQ +      +LL+ YV+ +  DK+ +  +KM E GF  S L YN M
Sbjct: 144 GLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHM 203

Query: 171 MCLYTNVGQHDKVPQVLAEMKENKVSPDNFSYRICINSYGTRCDLEGMESV-LKEMESQP 230
           + +Y + GQ +KVP ++ E+K  + SPD  +Y + + ++ +  D+EG E V LK  E + 
Sbjct: 204 LSMYISRGQFEKVPVLIKELK-IRTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEK- 263

Query: 231 HIVMDWNTYAVVANFFIKGGLTDKAVDALRKSEERLNSKDRIGHNHLISLYATLGNKEEV 290
            +  DW TY+V+ N + K    +KA  AL++ E+ ++ K+R+ +  LISL+A LG+K+ V
Sbjct: 264 -LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGV 323

Query: 291 LRLWKLDKSDSTRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVG 350
              WK  KS   +  + +Y++M+ ++V+LGE E+A+ +  EWES     D R+PN ++  
Sbjct: 324 NLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAE 383

Query: 351 YIDKGMCERAEALLEDLMKEGKATTPNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKG 410
           Y+++      E   E ++++G   + ++W  +   YL R + EK ++C   A+     K 
Sbjct: 384 YMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAID--SVKK 443

Query: 411 WKPNLRVITGILNWIGDNSSTEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLL 470
           W  N+R++ G    + +  + +  E  +  L+    VN ++Y++L++ + + G+    + 
Sbjct: 444 WTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLRTYAKAGEMALIVE 503

Query: 471 SQMKSDQIDEDEETEKIL 488
            +M  D ++ DEET++++
Sbjct: 504 ERMAKDNVELDEETKELI 516

BLAST of MS013612 vs. ExPASy TrEMBL
Match: A0A6J1CGU2 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111010721 PE=4 SV=1)

HSP 1 Score: 1012.7 bits (2617), Expect = 5.4e-292
Identity = 499/500 (99.80%), Postives = 500/500 (100.00%), Query Frame = 0

Query: 1   MDQNLFSKALTRYAMAGRSYHTNRMKKATLYAKISPLGDPSISVGPELDGWVQEGKKIRV 60
           MDQNLFSKALTRYAMAGRSYHTNRMKKATLYAKISPLGDPSISVGPELDGWVQEGKKIRV
Sbjct: 10  MDQNLFSKALTRYAMAGRSYHTNRMKKATLYAKISPLGDPSISVGPELDGWVQEGKKIRV 69

Query: 61  AELQRIIHDLRKRKRFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFD 120
           AELQRIIHDLRKRKRFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFD
Sbjct: 70  AELQRIIHDLRKRKRFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFD 129

Query: 121 QLKDQDKTGKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180
           QLKDQDKTGKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH
Sbjct: 130 QLKDQDKTGKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 189

Query: 181 DKVPQVLAEMKENKVSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAV 240
           DKVPQVLAEMKENKVSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAV
Sbjct: 190 DKVPQVLAEMKENKVSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAV 249

Query: 241 VANFFIKGGLTDKAVDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDS 300
           VANFFIKGGLTDKAVDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDS
Sbjct: 250 VANFFIKGGLTDKAVDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDS 309

Query: 301 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 310 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 369

Query: 361 ALLEDLMKEGKATTPNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKGWKPNLRVITGI 420
           ALLEDLMKEGKATTPNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKGWKPNLRVITGI
Sbjct: 370 ALLEDLMKEGKATTPNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKGWKPNLRVITGI 429

Query: 421 LNWIGDNSSTEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLLSQMKSDQIDED 480
           LNWIGDNSSTEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLLSQMKSDQIDED
Sbjct: 430 LNWIGDNSSTEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLLSQMKSDQIDED 489

Query: 481 EETEKILGTWQEATEGKSIG 501
           EET+KILGTWQEATEGKSIG
Sbjct: 490 EETKKILGTWQEATEGKSIG 509

BLAST of MS013612 vs. ExPASy TrEMBL
Match: A0A6J1K124 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490120 PE=4 SV=1)

HSP 1 Score: 906.4 bits (2341), Expect = 5.4e-260
Identity = 440/498 (88.35%), Postives = 474/498 (95.18%), Query Frame = 0

Query: 1   MDQNLFSKALTRYAMAGRSYHTNRMKKATLYAKISPLGDPSISVGPELDGWVQEGKKIRV 60
           MDQ  FSKALTRYA+A R YHTNR+KKATLYAKISPLGDP++SV PELDGWV+EGKK+R+
Sbjct: 1   MDQ-FFSKALTRYALADRFYHTNRLKKATLYAKISPLGDPNVSVEPELDGWVKEGKKVRI 60

Query: 61  AELQRIIHDLRKRKRFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFD 120
           AELQRIIHDLRKRKRFTQALEVSEWMK++GVCIFSPSEHAVQLDLIGRVRGYLSAESYF+
Sbjct: 61  AELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFN 120

Query: 121 QLKDQDKTGKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180
           QLK+QD+T KTYGALLNCYVRQRQV+KSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH
Sbjct: 121 QLKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180

Query: 181 DKVPQVLAEMKENKVSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAV 240
           DKVP+VLAEMKE  VSPDNFSYRICINSYG R DLEGME+VLKEMESQPHIVMDWNTYAV
Sbjct: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKGGLTDKAVDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDS 300
           VANFFIK  L DKAVDAL+K+EERL SKDRIGHNHLISLY TLGNKE+VLRLW LDK+D+
Sbjct: 241 VANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYTTLGNKEKVLRLWNLDKTDT 300

Query: 301 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 ALLEDLMKEGKATTPNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKGWKPNLRVITGI 420
           ALLEDLM++GK TTPNSWGAVAVQY+DRGETEK+VECMK AL+L++DKGWKPNLRVITGI
Sbjct: 361 ALLEDLMEKGKTTTPNSWGAVAVQYMDRGETEKSVECMKAALTLNMDKGWKPNLRVITGI 420

Query: 421 LNWIGDNSSTEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLLSQMKSDQIDED 480
           LNW+G+N+S EEVEAFVGSLRS IPVNREMYHALMK HIRGGKEVH LL+QMKSD+IDED
Sbjct: 421 LNWLGENASIEEVEAFVGSLRSAIPVNREMYHALMKVHIRGGKEVHELLNQMKSDKIDED 480

Query: 481 EETEKILGTWQEATEGKS 499
           EET+KILGT QE TEG+S
Sbjct: 481 EETKKILGTGQETTEGRS 497

BLAST of MS013612 vs. ExPASy TrEMBL
Match: A0A6J1GTN5 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457015 PE=4 SV=1)

HSP 1 Score: 904.0 bits (2335), Expect = 2.7e-259
Identity = 441/499 (88.38%), Postives = 473/499 (94.79%), Query Frame = 0

Query: 1   MDQNLFSKALTRYAMAGRSYHTNRMKKATLYAKISPLGDPSISVGPELDGWVQEGKKIRV 60
           MDQ  FSKALTRYA+AGR YHTNR+KKATLYAKISPLGDPS+SV P LDGWV+EGKK+R+
Sbjct: 1   MDQ-FFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRI 60

Query: 61  AELQRIIHDLRKRKRFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFD 120
           AELQRIIHDLRKRKRFTQALEVSEWMK++GVCIFSPSEHAVQLDLIGRVRGYLSAESYF+
Sbjct: 61  AELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFN 120

Query: 121 QLKDQDKTGKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180
           QLK+QD+T KTYGALLNCYVRQRQV+KSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH
Sbjct: 121 QLKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180

Query: 181 DKVPQVLAEMKENKVSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAV 240
           DKVP+VLAEMKE  VSPDNFSYRICINSYG R DLEGME+VLKEMESQPHIVMDWNTYAV
Sbjct: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKGGLTDKAVDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDS 300
           VANFFIK  L DKAVDAL+K+EERL SKDRIGHNHLISLYATLGNKE+VLRLW LDK+D+
Sbjct: 241 VANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDT 300

Query: 301 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TR INRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 ALLEDLMKEGKATTPNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKGWKPNLRVITGI 420
           ALLEDLM++GK TTPN WGAVAVQY+DR ETEK+VECMK AL+L++DKGWKPNLRVITGI
Sbjct: 361 ALLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGI 420

Query: 421 LNWIGDNSSTEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLLSQMKSDQIDED 480
           LNW+G+N+S EEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVH LL+QMKSD+IDED
Sbjct: 421 LNWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDED 480

Query: 481 EETEKILGTWQEATEGKSI 500
           EET+KILGT QE TEG  I
Sbjct: 481 EETKKILGTGQETTEGDLI 498

BLAST of MS013612 vs. ExPASy TrEMBL
Match: A0A5A7UM45 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00740 PE=4 SV=1)

HSP 1 Score: 861.7 bits (2225), Expect = 1.5e-246
Identity = 418/499 (83.77%), Postives = 459/499 (91.98%), Query Frame = 0

Query: 1   MDQNLFSKALTRYAMAGRSYHTNRMKKATLYAKISPLGDPSISVGPELDGWVQEGKKIRV 60
           MDQ LFSKALT YA+A RSYHT R+KKATLYAKISPLGDPSISV  ELDGWVQEGKK+RV
Sbjct: 1   MDQKLFSKALTHYALASRSYHTTRLKKATLYAKISPLGDPSISVESELDGWVQEGKKVRV 60

Query: 61  AELQRIIHDLRKRKRFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFD 120
           AELQRII D RKR RF+QAL+VSEWMK+SG CIFSP+EHAVQLDLIGRVRGYLSAE YF+
Sbjct: 61  AELQRIIRDFRKRSRFSQALQVSEWMKKSGACIFSPTEHAVQLDLIGRVRGYLSAEKYFN 120

Query: 121 QLKDQDKTGKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180
           QLK+QD+  KTYGALLNCYVRQ+QVDKSLSHLQKMKE+GFATSELTYND+MCLYT VGQH
Sbjct: 121 QLKEQDQNIKTYGALLNCYVRQQQVDKSLSHLQKMKELGFATSELTYNDIMCLYTRVGQH 180

Query: 181 DKVPQVLAEMKENKVSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAV 240
           +KVP+VLAEMK N VSPDNFSYRICINSYG R DLEGME+VLKEMESQPHIVMDWNTYAV
Sbjct: 181 EKVPEVLAEMKGNNVSPDNFSYRICINSYGARKDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKGGLTDKAVDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDS 300
           VANFFIK GLTDKAVDALRKSEE+L SKDRIGHNHLISLYATLGNKE+VLR+W LDK+ +
Sbjct: 241 VANFFIKAGLTDKAVDALRKSEEKLKSKDRIGHNHLISLYATLGNKEKVLRVWNLDKTAT 300

Query: 301 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TR INRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRIINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 ALLEDLMKEGKATTPNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKGWKPNLRVITGI 420
            LLE+L +  KATTPNSWGAVAV+YLDRGETEKA+ECMK ALS++ DKGWKPN RVITG+
Sbjct: 361 TLLENLNQNEKATTPNSWGAVAVKYLDRGETEKALECMKAALSVNTDKGWKPNPRVITGV 420

Query: 421 LNWIGDNSSTEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLLSQMKSDQIDED 480
           LNW+GD    EEVEAFV +LRSVIPVNREMYHAL+K +IR  KEV+ +L++MK+D+I+ED
Sbjct: 421 LNWLGDKGIVEEVEAFVSALRSVIPVNREMYHALLKVYIRADKEVNEVLNKMKADKINED 480

Query: 481 EETEKILGTWQEATEGKSI 500
           EET+KILGTW+E TEGKSI
Sbjct: 481 EETKKILGTWEETTEGKSI 499

BLAST of MS013612 vs. ExPASy TrEMBL
Match: A0A1S3B5N2 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486296 PE=4 SV=1)

HSP 1 Score: 861.7 bits (2225), Expect = 1.5e-246
Identity = 418/499 (83.77%), Postives = 459/499 (91.98%), Query Frame = 0

Query: 1   MDQNLFSKALTRYAMAGRSYHTNRMKKATLYAKISPLGDPSISVGPELDGWVQEGKKIRV 60
           MDQ LFSKALT YA+A RSYHT R+KKATLYAKISPLGDPSISV  ELDGWVQEGKK+RV
Sbjct: 1   MDQKLFSKALTHYALASRSYHTTRLKKATLYAKISPLGDPSISVESELDGWVQEGKKVRV 60

Query: 61  AELQRIIHDLRKRKRFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFD 120
           AELQRII D RKR RF+QAL+VSEWMK+SG CIFSP+EHAVQLDLIGRVRGYLSAE YF+
Sbjct: 61  AELQRIIRDFRKRSRFSQALQVSEWMKKSGACIFSPTEHAVQLDLIGRVRGYLSAEKYFN 120

Query: 121 QLKDQDKTGKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180
           QLK+QD+  KTYGALLNCYVRQ+QVDKSLSHLQKMKE+GFATSELTYND+MCLYT VGQH
Sbjct: 121 QLKEQDQNIKTYGALLNCYVRQQQVDKSLSHLQKMKELGFATSELTYNDIMCLYTRVGQH 180

Query: 181 DKVPQVLAEMKENKVSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAV 240
           +KVP+VLAEMK N VSPDNFSYRICINSYG R DLEGME+VLKEMESQPHIVMDWNTYAV
Sbjct: 181 EKVPEVLAEMKGNNVSPDNFSYRICINSYGARKDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKGGLTDKAVDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDS 300
           VANFFIK GLTDKAVDALRKSEE+L SKDRIGHNHLISLYATLGNKE+VLR+W LDK+ +
Sbjct: 241 VANFFIKAGLTDKAVDALRKSEEKLKSKDRIGHNHLISLYATLGNKEKVLRVWNLDKTAT 300

Query: 301 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TR INRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRIINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 ALLEDLMKEGKATTPNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKGWKPNLRVITGI 420
            LLE+L +  KATTPNSWGAVAV+YLDRGETEKA+ECMK ALS++ DKGWKPN RVITG+
Sbjct: 361 TLLENLNQNEKATTPNSWGAVAVKYLDRGETEKALECMKAALSVNTDKGWKPNPRVITGV 420

Query: 421 LNWIGDNSSTEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLLSQMKSDQIDED 480
           LNW+GD    EEVEAFV +LRSVIPVNREMYHAL+K +IR  KEV+ +L++MK+D+I+ED
Sbjct: 421 LNWLGDKGIVEEVEAFVSALRSVIPVNREMYHALLKVYIRADKEVNEVLNKMKADKINED 480

Query: 481 EETEKILGTWQEATEGKSI 500
           EET+KILGTW+E TEGKSI
Sbjct: 481 EETKKILGTWEETTEGKSI 499

BLAST of MS013612 vs. TAIR 10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 617.8 bits (1592), Expect = 7.4e-177
Identity = 297/477 (62.26%), Postives = 371/477 (77.78%), Query Frame = 0

Query: 15  MAGRSYHTNRMKKATLYAKISPLGDPSISVGPELDGWVQEGKKIRVAELQRIIHDLRKRK 74
           +A R Y+TNR+KK TLY+KISPLGDP  SV PEL  WVQ GKK+ VAEL RI+HDLR+RK
Sbjct: 12  IASRYYYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRK 71

Query: 75  RFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFDQLKDQDKTGKTYGA 134
           RF  ALEVS+WM ++GVC+FSP+EHAV LDLIGRV G+++AE YF+ LK+Q K  KTYGA
Sbjct: 72  RFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGA 131

Query: 135 LLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKVPQVLAEMKENK 194
           LLNCYVRQ+ V+KSL H +KMKEMGF TS LTYN++MCLYTN+GQH+KVP+VL EMKE  
Sbjct: 132 LLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEEN 191

Query: 195 VSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAVVANFFIKGGLTDKA 254
           V+PDN+SYRICIN++G   DLE +   L++ME +  I MDWNTYAV A F+I GG  D+A
Sbjct: 192 VAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRA 251

Query: 255 VDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDSTRFINRDYITMLES 314
           V+ L+ SE RL  KD  G+NHLI+LYA LG K EVLRLW L+K    R IN+DY+T+L+S
Sbjct: 252 VELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQS 311

Query: 315 LVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMKEGKATT 374
           LV++  L EAE+VL EW+SSGNCYDFRVPNTVI GYI K M E+AEA+LEDL + GKATT
Sbjct: 312 LVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATT 371

Query: 375 PNSWGAVAVQYLDRGETEKAVECMKTALSLHI-DKGWKPNLRVITGILNWIGDNSSTEEV 434
           P SW  VA  Y ++G  E A +CMKTAL + +  + W+P L ++T +L+W+GD  S +EV
Sbjct: 372 PESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEV 431

Query: 435 EAFVGSLRSVIPVNREMYHALMKAHIR-GGKEVHGLLSQMKSDQIDEDEETEKILGT 490
           E+FV SLR+ I VN++MYHAL+KA IR GG+ +  LL +MK D+I+ DEET  IL T
Sbjct: 432 ESFVASLRNCIGVNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVILST 488

BLAST of MS013612 vs. TAIR 10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 299.7 bits (766), Expect = 4.5e-81
Identity = 150/397 (37.78%), Postives = 244/397 (61.46%), Query Frame = 0

Query: 29  TLYAKISPLGDPSISVGPELDGWVQEGKKIRVAELQRIIHDLRKRKRFTQALEVSEWMKQ 88
           TL  +++  GDPS S+   LDGW+ +G  ++ +EL  II  LRK  RF+ AL++S+WM +
Sbjct: 39  TLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSE 98

Query: 89  SGVCIFSPSEHAVQLDLIGRVRGYLSAESYFDQLKDQDKTGKTYGALLNCYVRQRQVDKS 148
             V   S  + A++LDLI +V G   AE +F+ +  + +    YGALLNCY  ++ + K+
Sbjct: 99  HRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKA 158

Query: 149 LSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKVPQVLAEMKENKVSPDNFSYRICINS 208
               Q+MKE+GF    L YN M+ LY   G++  V ++L EM++  V PD F+    +++
Sbjct: 159 EQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHA 218

Query: 209 YGTRCDLEGMESVLKEMESQPHIVMDWNTYAVVANFFIKGGLTDKAVDALRKSEERLNS- 268
           Y    D+EGME  L   E+   + +DW TYA  AN +IK GLT+KA++ LRKSE+ +N+ 
Sbjct: 219 YSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQ 278

Query: 269 KDRIGHNHLISLYATLGNKEEVLRLWKLDKSDSTRFINRDYITMLESLVRLGELEEAEKV 328
           K +  +  L+S Y   G KEEV RLW L K +   F N  YI+++ +L+++ ++EE EK+
Sbjct: 279 KRKHAYEVLMSFYGAAGKKEEVYRLWSLYK-ELDGFYNTGYISVISALLKMDDIEEVEKI 338

Query: 329 LKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMKEGKATTPNSWGAVAVQYLD 388
           ++EWE+  + +D R+P+ +I GY  KGM E+AE ++  L+++ +    ++W  +A+ Y  
Sbjct: 339 MEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKM 398

Query: 389 RGETEKAVECMKTALSLHIDKGWKPNLRVITGILNWI 425
            G+ EKAVE  K A+ +    GW+P+  V+   ++++
Sbjct: 399 AGKMEKAVEKWKRAIEVS-KPGWRPHQVVLMSCVDYL 433

BLAST of MS013612 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 297.7 bits (761), Expect = 1.7e-80
Identity = 161/455 (35.38%), Postives = 258/455 (56.70%), Query Frame = 0

Query: 30  LYAKISPLGDPSISVGPELDGWVQEGKKIRVAELQRIIHDLRKRKRFTQALEVSEWMKQS 89
           +Y KIS +  P +     L+ W + G+K+   EL R++ +LRK KR  QALEV +WM   
Sbjct: 69  IYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNR 128

Query: 90  GVCI-FSPSEHAVQLDLIGRVRGYLSAESYFDQLKDQDKTGKTYGALLNCYVRQRQVDKS 149
           G     S S+ A+QLDLIG+VRG   AE +F QL +  K  + YG+LLN YVR +  +K+
Sbjct: 129 GERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKA 188

Query: 150 LSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKVPQVLAEMKENKVSPDNFSYRICINS 209
            + L  M++ G+A   L +N MM LY N+ ++DKV  ++ EMK+  +  D +SY I ++S
Sbjct: 189 EALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSS 248

Query: 210 YGTRCDLEGMESVLKEMESQPHIVMDWNTYAVVANFFIKGGLTDKAVDALRKSEERLNSK 269
            G+   +E ME V ++M+S   I  +W T++ +A  +IK G T+KA DALRK E R+  +
Sbjct: 249 CGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGR 308

Query: 270 DRIGHNHLISLYATLGNKEEVLRLWKLDKSDSTRFINRDYITMLESLVRLGELEEAEKVL 329
           +RI +++L+SLY +LGNK+E+ R+W + KS      N  Y  ++ SLVR+G++E AEKV 
Sbjct: 309 NRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVY 368

Query: 330 KEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMKEGKATTPNSWGAVAVQYLDR 389
           +EW    + YD R+PN ++  Y+     E AE L + +++ G   + ++W  +AV +  +
Sbjct: 369 EEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRK 428

Query: 390 GETEKAVECMKTALSLHIDKGWKPNLRVITGILNWIGDNSSTEEVEAFVGSLRSVIPVNR 449
               +A+ C++ A S      W+P + +++G      + S     EA +  LR    +  
Sbjct: 429 RCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLED 488

Query: 450 EMYHALMKAHIR--------GGKEVHGLLSQMKSD 476
           + Y AL+                E   LL+Q++ D
Sbjct: 489 KSYLALIDVDENRTVNNSEIDAHETDALLTQLQDD 523

BLAST of MS013612 vs. TAIR 10
Match: AT4G01990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 278.5 bits (711), Expect = 1.1e-74
Identity = 156/473 (32.98%), Postives = 260/473 (54.97%), Query Frame = 0

Query: 16  AGRSYHTNRMKKATLYAKISPLGDPSISVGPE-LDGWVQEGKKIRVAELQRIIHDLRKRK 75
           A  S  T   K  ++Y K+S LG        E L+ +V EG  ++  +L R   DLRK +
Sbjct: 27  AAASVPTKAKKHRSIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFR 86

Query: 76  RFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFDQLKDQDKTGKTYGA 135
           +  +ALE+ EWM++  +  F+ S+HA++L+LI + +G  +AE+YF+ L D  K   TYG+
Sbjct: 87  QPQRALEIFEWMERKEIA-FTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGS 146

Query: 136 LLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKVPQVLAEMKENK 195
           LLNCY  +++  K+ +H + M ++   ++ L +N++M +Y  +GQ +KVP ++  MKE  
Sbjct: 147 LLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKS 206

Query: 196 VSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAVVANFFIKGGLTDKA 255
           ++P + +Y + I S G+  DL+G+E VL EM+++   +  WNT+A +A  +IK GL  KA
Sbjct: 207 ITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKA 266

Query: 256 VDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDSTRFINRDYITMLES 315
            +AL+  E  +N   R  ++ LI+LY  + N  EV R+W L K       N  Y+TML +
Sbjct: 267 EEALKSLENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRA 326

Query: 316 LVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMKEGKATT 375
           L +L +++  +KV  EWES+   YD R+ N  I  Y+ + M E AEA+    MK+ K   
Sbjct: 327 LSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQF 386

Query: 376 PNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKGWKPNLRVITGILNWIGDNSSTEEVE 435
             +   + +  L   + + A++  + A+ L  DK W  +  +I+       +    +  E
Sbjct: 387 SKARQLLMMHLLKNDQADLALKHFEAAV-LDQDKNWTWSSELISSFFLHFEEAKDVDGAE 446

Query: 436 AFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLLSQMKSDQIDEDEETEKIL 488
            F  +L    P++ E Y  LMK ++  GK    +  +++   I  DEE E +L
Sbjct: 447 EFCKTLTKWSPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQECLL 497

BLAST of MS013612 vs. TAIR 10
Match: AT4G02820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 263.8 bits (673), Expect = 2.7e-70
Identity = 142/438 (32.42%), Postives = 251/438 (57.31%), Query Frame = 0

Query: 51  WVQEGKKIRVAELQRIIHDLRKRKRFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVR 110
           W +EG  +R  EL RI+ +LRK KR+  ALE+ EWM           ++AV LDLI ++R
Sbjct: 84  WKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIR 143

Query: 111 GYLSAESYFDQLKDQDKTGKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDM 170
           G  SAE +F+ + DQ +      +LL+ YV+ +  DK+ +  +KM E GF  S L YN M
Sbjct: 144 GLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHM 203

Query: 171 MCLYTNVGQHDKVPQVLAEMKENKVSPDNFSYRICINSYGTRCDLEGMESV-LKEMESQP 230
           + +Y + GQ +KVP ++ E+K  + SPD  +Y + + ++ +  D+EG E V LK  E + 
Sbjct: 204 LSMYISRGQFEKVPVLIKELK-IRTSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEK- 263

Query: 231 HIVMDWNTYAVVANFFIKGGLTDKAVDALRKSEERLNSKDRIGHNHLISLYATLGNKEEV 290
            +  DW TY+V+ N + K    +KA  AL++ E+ ++ K+R+ +  LISL+A LG+K+ V
Sbjct: 264 -LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGV 323

Query: 291 LRLWKLDKSDSTRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVG 350
              WK  KS   +  + +Y++M+ ++V+LGE E+A+ +  EWES     D R+PN ++  
Sbjct: 324 NLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAE 383

Query: 351 YIDKGMCERAEALLEDLMKEGKATTPNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKG 410
           Y+++      E   E ++++G   + ++W  +   YL R + EK ++C   A+     K 
Sbjct: 384 YMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAID--SVKK 443

Query: 411 WKPNLRVITGILNWIGDNSSTEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLL 470
           W  N+R++ G    + +  + +  E  +  L+    VN ++Y++L++ + + G+    + 
Sbjct: 444 WTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLRTYAKAGEMALIVE 503

Query: 471 SQMKSDQIDEDEETEKIL 488
            +M  D ++ DEET++++
Sbjct: 504 ERMAKDNVELDEETKELI 516

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022139928.11.1e-29199.80pentatricopeptide repeat-containing protein At4g21705, mitochondrial [Momordica ... [more]
XP_023542644.11.7e-26089.09pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 ... [more]
XP_022994385.11.1e-25988.35pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 ... [more]
XP_022954890.15.6e-25988.38pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 ... [more]
KAG7012430.12.8e-25888.69Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
Match NameE-valueIdentityDescription
Q84JR31.0e-17562.26Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop... [more]
Q9SKU66.3e-8037.78Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop... [more]
Q8LPS62.4e-7935.38Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX... [more]
Q93WC51.5e-7332.98Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidop... [more]
Q9SY073.8e-6932.42Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1CGU25.4e-29299.80pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Momordic... [more]
A0A6J1K1245.4e-26088.35pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 ... [more]
A0A6J1GTN52.7e-25988.38pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 ... [more]
A0A5A7UM451.5e-24683.77Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B5N21.5e-24683.77pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Cucumis ... [more]
Match NameE-valueIdentityDescription
AT4G21705.17.4e-17762.26Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G20710.14.5e-8137.78Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G02150.11.7e-8035.38Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G01990.11.1e-7432.98Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G02820.12.7e-7032.42Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 308..335
e-value: 0.0024
score: 18.0
coord: 344..370
e-value: 0.11
score: 12.8
coord: 131..160
e-value: 1.6E-4
score: 21.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 165..209
e-value: 1.8E-8
score: 34.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 200..234
e-value: 0.0012
score: 16.9
coord: 131..160
e-value: 5.8E-5
score: 21.0
coord: 308..338
e-value: 3.7E-4
score: 18.5
coord: 166..198
e-value: 4.4E-6
score: 24.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 163..197
score: 9.985802
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 128..162
score: 9.591195
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 51..188
e-value: 1.7E-14
score: 55.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 189..298
e-value: 2.8E-13
score: 52.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 299..424
e-value: 7.4E-13
score: 50.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 310..405
NoneNo IPR availablePANTHERPTHR45717:SF20OS07G0598500 PROTEINcoord: 17..490
NoneNo IPR availablePANTHERPTHR45717OS12G0527900 PROTEINcoord: 17..490

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS013612.1MS013612.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding