MS013553 (gene) Bitter gourd (TR) v1

Overview


Name	MS013553
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein DOG1-like 1
Location	scaffold402: 2389481 .. 2390311 (+)
RNA-Seq Expression	MS013553
Synteny	MS013553

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATGGATTGCAGCAGCAGCAGCAGCAGCAGGAGCAGGAGGGAGGTAAAGGATAATAATGATGATGAGGCGATCACGAATCACGAGGAGCGTTCCCGCTGCTGCTTCCAGGAGTGGATGCAAATCCAGCGCCAAGACCTGTCCCACCTCCTCCACTCCCTTCAGACGTTCTACAAAACCGACAACGACGACCAAATCAAGCCGCTCCTCCGCGACTGCATCTCCCACTTCAACGACTACATCTCCACTCGCAGCCGCCTCGCCAGCGTCGACGCCTCCCCCTTCTTCGCCCCCACCTGGTGCACCTCCCTGGAGAATTCCCTCCTCTGGCTCGCCGGCTGCAGGCCCTCCATCTTCATCCGCCTCCTCTACGCCATCTCCGGCTCCCACCTCGAGGCCCGCCTCCACCACCTCCTCCAAGCCCAGGCCCAACCCCAAGCCCAGGCCCAACGCCTCGAGGACCTCTCCCCGGCCCAGATGGCCCGCGTCAACGCCCTCCACCTGCGGACCATTCGGGAGGAGGAGAAGCTGAGCGGGGAGATGGCCAGCTCCCAGGAGGAGCTCGCCGACCACCCCATTGCGGTCATTGCCAACGAGACCGAGGAGGGCGAGATCGGGGAGCCCAACGGGGACGCCGACAAGGCGCTGGAGGACCACCACAGGGTCATGCACCGGATCATGGAGAAGGCCGACCACCTCCGCCTCGCCACTCTCCAGGAACTGCTCCAGATATTGCAGCCGCTTCAGGCGCTCGAGTTTCTGGTCGCCGGTAAGAAGCTTCATCTCTCCCTACATCAATGGGGGAAACACAGAGATGAGAAGCATGGC

mRNA sequence

ATGGCCATGGATTGCAGCAGCAGCAGCAGCAGCAGGAGCAGGAGGGAGGTAAAGGATAATAATGATGATGAGGCGATCACGAATCACGAGGAGCGTTCCCGCTGCTGCTTCCAGGAGTGGATGCAAATCCAGCGCCAAGACCTGTCCCACCTCCTCCACTCCCTTCAGACGTTCTACAAAACCGACAACGACGACCAAATCAAGCCGCTCCTCCGCGACTGCATCTCCCACTTCAACGACTACATCTCCACTCGCAGCCGCCTCGCCAGCGTCGACGCCTCCCCCTTCTTCGCCCCCACCTGGTGCACCTCCCTGGAGAATTCCCTCCTCTGGCTCGCCGGCTGCAGGCCCTCCATCTTCATCCGCCTCCTCTACGCCATCTCCGGCTCCCACCTCGAGGCCCGCCTCCACCACCTCCTCCAAGCCCAGGCCCAACCCCAAGCCCAGGCCCAACGCCTCGAGGACCTCTCCCCGGCCCAGATGGCCCGCGTCAACGCCCTCCACCTGCGGACCATTCGGGAGGAGGAGAAGCTGAGCGGGGAGATGGCCAGCTCCCAGGAGGAGCTCGCCGACCACCCCATTGCGGTCATTGCCAACGAGACCGAGGAGGGCGAGATCGGGGAGCCCAACGGGGACGCCGACAAGGCGCTGGAGGACCACCACAGGGTCATGCACCGGATCATGGAGAAGGCCGACCACCTCCGCCTCGCCACTCTCCAGGAACTGCTCCAGATATTGCAGCCGCTTCAGGCGCTCGAGTTTCTGGTCGCCGGTAAGAAGCTTCATCTCTCCCTACATCAATGGGGGAAACACAGAGATGAGAAGCATGGC

Coding sequence (CDS)

ATGGCCATGGATTGCAGCAGCAGCAGCAGCAGCAGGAGCAGGAGGGAGGTAAAGGATAATAATGATGATGAGGCGATCACGAATCACGAGGAGCGTTCCCGCTGCTGCTTCCAGGAGTGGATGCAAATCCAGCGCCAAGACCTGTCCCACCTCCTCCACTCCCTTCAGACGTTCTACAAAACCGACAACGACGACCAAATCAAGCCGCTCCTCCGCGACTGCATCTCCCACTTCAACGACTACATCTCCACTCGCAGCCGCCTCGCCAGCGTCGACGCCTCCCCCTTCTTCGCCCCCACCTGGTGCACCTCCCTGGAGAATTCCCTCCTCTGGCTCGCCGGCTGCAGGCCCTCCATCTTCATCCGCCTCCTCTACGCCATCTCCGGCTCCCACCTCGAGGCCCGCCTCCACCACCTCCTCCAAGCCCAGGCCCAACCCCAAGCCCAGGCCCAACGCCTCGAGGACCTCTCCCCGGCCCAGATGGCCCGCGTCAACGCCCTCCACCTGCGGACCATTCGGGAGGAGGAGAAGCTGAGCGGGGAGATGGCCAGCTCCCAGGAGGAGCTCGCCGACCACCCCATTGCGGTCATTGCCAACGAGACCGAGGAGGGCGAGATCGGGGAGCCCAACGGGGACGCCGACAAGGCGCTGGAGGACCACCACAGGGTCATGCACCGGATCATGGAGAAGGCCGACCACCTCCGCCTCGCCACTCTCCAGGAACTGCTCCAGATATTGCAGCCGCTTCAGGCGCTCGAGTTTCTGGTCGCCGGTAAGAAGCTTCATCTCTCCCTACATCAATGGGGGAAACACAGAGATGAGAAGCATGGC

Protein sequence

MAMDCSSSSSSRSRREVKDNNDDEAITNHEERSRCCFQEWMQIQRQDLSHLLHSLQTFYKTDNDDQIKPLLRDCISHFNDYISTRSRLASVDASPFFAPTWCTSLENSLLWLAGCRPSIFIRLLYAISGSHLEARLHHLLQAQAQPQAQAQRLEDLSPAQMARVNALHLRTIREEEKLSGEMASSQEELADHPIAVIANETEEGEIGEPNGDADKALEDHHRVMHRIMEKADHLRLATLQELLQILQPLQALEFLVAGKKLHLSLHQWGKHRDEKHG

Homology

[Close]

BLAST of MS013553 vs. NCBI nr
Match: XP_038895667.1 (protein DELAY OF GERMINATION 1 [Benincasa hispida])

HSP 1 Score: 297.7 bits (761), Expect = 1.0e-76
Identity = 160/271 (59.04%), Postives = 202/271 (74.54%), Query Frame = 0


Query: 9   SSSRSRREVKDNNDDEAITNHEERSRCCFQEWMQIQRQDLSHLLHSLQTFYKTDNDDQIK 68
           ++ R     K+  +D+  T+HEERSRCCFQEWMQ+QR+DL+HLL SL T    ++++  K
Sbjct: 2   ATDRCSSTKKEEEEDDGSTSHEERSRCCFQEWMQLQREDLTHLLLSLHTH---NHEETNK 61

Query: 69  PLLRDCISHFNDYISTRSRLASVDASPFFAPTWCTSLENSLLWLAGCRPSIFIRLLYAIS 128
            L+R+CI+HF DYI++R  LA  D SPFFAPTWCTSLENSLLW+AGCRPSIFIRL+YA+ 
Sbjct: 62  NLIRNCITHFEDYITSRRHLAQEDVSPFFAPTWCTSLENSLLWIAGCRPSIFIRLVYALC 121

Query: 129 GSHLEARLHHLLQ-AQAQPQAQAQRLEDLSPAQMARVNALHLRTIREEEKLSGEMASSQE 188
           GS  +ARL   L+  +         + +LSP QM RVN LH+RTI+ EEKL+ EMASSQE
Sbjct: 122 GSEADARLGEWLEGVRNNNSCHVGGIGELSPTQMVRVNGLHMRTIKAEEKLTSEMASSQE 181

Query: 189 ELADHPIAVIANETEEGEIGEPNGDADKALEDHHRVMHRIMEKADHLRLATLQEL-LQIL 248
           ++AD PIAVI  +  EG +GE + +   ALE + +VM  +MEKAD LRL TL+EL L+IL
Sbjct: 182 DVADQPIAVIVAKEMEG-VGEESEETKMALEQYEKVMREVMEKADELRLNTLKELVLEIL 241

Query: 249 QPLQALEFLVAGKKLHLSLHQWGKHRDEKHG 278
           +P+QALEFLVA KKLHLSLHQWGK RDEK G
Sbjct: 242 KPIQALEFLVASKKLHLSLHQWGKRRDEKQG 268

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BLAST of MS013553 vs. NCBI nr
Match: KAG6573313.1 (Protein DOG1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 297.0 bits (759), Expect = 1.7e-76
Identity = 157/260 (60.38%), Postives = 200/260 (76.92%), Query Frame = 0


Query: 21  NDDEAI-TNHEERSRCCFQEWMQIQRQDLSHLLHSLQTFYKTDNDDQIKPLLRDCISHFN 80
           +D EA+   H+ RSRCCFQEWMQ+QRQDL+ LL S+   + T NDDQ + L+R+C++HF 
Sbjct: 2   DDGEALEATHQHRSRCCFQEWMQLQRQDLTLLLESI---HNTHNDDQSRTLIRNCLAHFE 61

Query: 81  DYISTRSRLASVDASPFFAPTWCTSLENSLLWLAGCRPSIFIRLLYAISGSHLEARLHHL 140
           DYI+ R RLA  DA PFFAPTWCTSLENSLLW+AGCRPSIFIRLLYA+SG  ++ARL   
Sbjct: 62  DYITNRRRLAEEDAFPFFAPTWCTSLENSLLWIAGCRPSIFIRLLYALSGCEVDARLGEW 121

Query: 141 LQA-QAQPQAQAQRLEDLSPAQMARVNALHLRTIREEEKLSGEMASSQEELADHPIAVIA 200
           L+  + +       + +LS +Q+ RVN LH+RT+R EE+   EMAS QEE AD PIAVI 
Sbjct: 122 LEGIRGESGNHHLHVGNLSASQLVRVNGLHMRTVRAEERQGREMASCQEEPADEPIAVIV 181

Query: 201 NETEEGEIGEPNGD-ADKALEDHHRVMHRIMEKADHLRLATLQELLQILQPLQALEFLVA 260
           NE  EG +GE  G+ A++AL++H R M R+MEKAD LRL T++E+++IL+P+QA+EFLVA
Sbjct: 182 NEM-EGVVGEEVGEAAERALKEHEREMRRMMEKADELRLKTIKEVMEILEPVQAVEFLVA 241

Query: 261 GKKLHLSLHQWGKHRDEKHG 278
            KKLHLSLHQWGK RDE+HG
Sbjct: 242 SKKLHLSLHQWGKRRDERHG 257

[Close]

BLAST of MS013553 vs. NCBI nr
Match: XP_022954444.1 (protein DOG1-like 1 [Cucurbita moschata])

HSP 1 Score: 295.4 bits (755), Expect = 5.0e-76
Identity = 156/260 (60.00%), Postives = 199/260 (76.54%), Query Frame = 0


Query: 21  NDDEAI-TNHEERSRCCFQEWMQIQRQDLSHLLHSLQTFYKTDNDDQIKPLLRDCISHFN 80
           +D EA+   H+ RSRCCFQEWMQ+QRQDL+ LL S+   + T NDDQ + L+R+C++HF 
Sbjct: 2   DDGEALEATHQHRSRCCFQEWMQLQRQDLTLLLESI---HNTHNDDQSRTLIRNCLAHFE 61

Query: 81  DYISTRSRLASVDASPFFAPTWCTSLENSLLWLAGCRPSIFIRLLYAISGSHLEARLHHL 140
           DYI+ R R A  DA PFFAPTWCTSLENSLLW+AGCRPSIFIRLLYA+SG  ++ARL   
Sbjct: 62  DYITNRRRFAEEDAFPFFAPTWCTSLENSLLWIAGCRPSIFIRLLYALSGCEVDARLGEW 121

Query: 141 LQA-QAQPQAQAQRLEDLSPAQMARVNALHLRTIREEEKLSGEMASSQEELADHPIAVIA 200
           L+  + +       + +LS +Q+ RVN LH+RT+R EE+   EMAS QEE AD PIAVI 
Sbjct: 122 LEGIRGESGNHHLHVGNLSASQLVRVNGLHMRTVRAEERQGREMASCQEEPADEPIAVIV 181

Query: 201 NETEEGEIGEPNGD-ADKALEDHHRVMHRIMEKADHLRLATLQELLQILQPLQALEFLVA 260
           NE  EG +GE  G+ A++AL++H R M R+MEKAD LRL T++E+++IL+P+QA+EFLVA
Sbjct: 182 NEM-EGVVGEEVGEAAERALKEHEREMRRMMEKADELRLKTIKEVMEILEPVQAVEFLVA 241

Query: 261 GKKLHLSLHQWGKHRDEKHG 278
            KKLHLSLHQWGK RDE+HG
Sbjct: 242 SKKLHLSLHQWGKRRDERHG 257

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BLAST of MS013553 vs. NCBI nr
Match: XP_023520222.1 (protein DOG1-like 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287.0 bits (733), Expect = 1.8e-73
Identity = 160/268 (59.70%), Postives = 193/268 (72.01%), Query Frame = 0


Query: 22  DDEAITNHEERSRCCFQEWMQIQRQDLSHLLHSLQTFYKTDNDDQIKPLLRDCISHFNDY 81
           D  + T H+ERSRCCFQEWMQ+QRQDL+ LL SL      ++ ++IK L+  CI+HF DY
Sbjct: 4   DTSSGTTHQERSRCCFQEWMQLQRQDLT-LLQSLHKKPNHNDHEEIKTLICSCIAHFEDY 63

Query: 82  ISTRSRLASVDASPFFAPTWCTSLENSLLWLAGCRPSIFIRLLYAISGSHLEARLHHLLQ 141
           ISTRSRLA  D S FFAPTWCTSLENSLLW+AGCRP+IFIRL+YA+SG  +EARL   ++
Sbjct: 64  ISTRSRLAQEDPSTFFAPTWCTSLENSLLWIAGCRPTIFIRLVYALSGCEVEARLRKWME 123

Query: 142 AQAQP-----------QAQAQRLEDLSPAQMARVNALHLRTIREEEKLSGEMASSQEELA 201
                            + +  + +LSP QM RV+ LH+RT+R EEKL+ EMAS QEELA
Sbjct: 124 GMRNNNDDHNNNFNSISSGSDSVGELSPTQMKRVDELHMRTLRAEEKLTSEMASLQEELA 183

Query: 202 DHPIAVIANETEEGEIGEPNGDADKALEDHHRVMHRIMEKADHLRLATLQEL-LQILQPL 261
           D PIAVIANE E    GE N +A+ AL++H   M  IMEKAD LRL TL+EL L+IL+P 
Sbjct: 184 DQPIAVIANEME--GTGEMNEEAEMALKEHETAMRGIMEKADELRLNTLKELALEILKPP 243

Query: 262 QALEFLVAGKKLHLSLHQWGKHRDEKHG 278
           QAL+FL A KKLHL LHQWGK RDEKHG
Sbjct: 244 QALQFLAASKKLHLCLHQWGKWRDEKHG 268

[Close]

BLAST of MS013553 vs. NCBI nr
Match: KAG6583954.1 (Protein DOG1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 287.0 bits (733), Expect = 1.8e-73
Identity = 163/271 (60.15%), Postives = 196/271 (72.32%), Query Frame = 0


Query: 22  DDEAITNHEERSRCCFQEWMQIQRQDLSHLLHSLQTFYK--TDND-DQIKPLLRDCISHF 81
           D  + T H+ERSRCCFQEWMQ+QRQDL+     LQ+F+K  T ND ++IK L+  CI+HF
Sbjct: 4   DTSSGTTHQERSRCCFQEWMQLQRQDLT----LLQSFHKKPTHNDHEEIKTLICSCIAHF 63

Query: 82  NDYISTRSRLASVDASPFFAPTWCTSLENSLLWLAGCRPSIFIRLLYAISGSHLEARLHH 141
            DYISTRSRLA  D S FFAPTWCTSLENSLLW+AGCRP+IFIRL+YA+SG  +EARL  
Sbjct: 64  EDYISTRSRLAQEDPSTFFAPTWCTSLENSLLWIAGCRPTIFIRLVYALSGCEVEARLRK 123

Query: 142 LLQAQAQP-----------QAQAQRLEDLSPAQMARVNALHLRTIREEEKLSGEMASSQE 201
            ++                 + +  + +LS  QM RV+ LH+RT+R EEKL+ EMAS QE
Sbjct: 124 WMEGMRNSNDDNSNNFNSISSGSDSVGELSSTQMKRVDELHMRTLRAEEKLTSEMASLQE 183

Query: 202 ELADHPIAVIANETEEGEIGEPNGDADKALEDHHRVMHRIMEKADHLRLATLQEL-LQIL 261
           ELAD PIAVIANE E   IGE N +A+ AL++H   M  IMEKAD LRL TL+EL L+IL
Sbjct: 184 ELADQPIAVIANEME--GIGEMNEEAEMALKEHETAMRGIMEKADELRLNTLKELALEIL 243

Query: 262 QPLQALEFLVAGKKLHLSLHQWGKHRDEKHG 278
           +P QAL+FL A KKLHL LHQWGK RDEKHG
Sbjct: 244 KPPQALQFLAASKKLHLCLHQWGKWRDEKHG 268

[Close]

BLAST of MS013553 vs. ExPASy Swiss-Prot
Match: A0SVK0 (Protein DELAY OF GERMINATION 1 OS=Arabidopsis thaliana OX=3702 GN=DOG1 PE=1 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 5.6e-46
Identity = 104/252 (41.27%), Postives = 160/252 (63.49%), Query Frame = 0


Query: 31  ERSRCCFQEWMQIQRQ---DLSHLLHSLQTFYKTDNDDQIKPLLRDCISHFNDYISTRSR 90
           E+++  + EWM +Q Q   +L  LL   ++    DND++++ L    I  F +Y + R+ 
Sbjct: 9   EQAQDSYLEWMSLQSQRIPELKQLLAQRRSHGDEDNDNKLRKLTGKIIGDFKNYAAKRAD 68

Query: 91  LASVDASPFFAPTWCTSLENSLLWLAGCRPSIFIRLLYAISGSHLEARLHHLLQ----AQ 150
           LA   +S ++APTW + LEN+L+W+ GCRPS F RL+YA+ GS  E R+   L+     +
Sbjct: 69  LAHRCSSNYYAPTWNSPLENALIWMGGCRPSSFFRLVYALCGSQTEIRVTQFLRNIDGYE 128

Query: 151 AQPQAQAQRLEDLSPAQMARVNALHLRTIREEEKLSGEMASSQEELADHPIAVIANETEE 210
           +        L DLS  Q+A++N LH++ I EEEK++ +++S QE+ AD PIA +A E E 
Sbjct: 129 SSGGGGGASLSDLSAEQLAKINVLHVKIIDEEEKMTKKVSSLQEDAADIPIATVAYEME- 188

Query: 211 GEIGEPNGDADKALEDHHRVMHRIMEKADHLRLATLQELLQILQPLQALEFLVAGKKLHL 270
             +GEPN   D+AL+     M R++ +AD+LR+ TL ++L IL P+Q  +FL+AGKKLHL
Sbjct: 189 -NVGEPNVVVDQALDKQEEAMARLLVEADNLRVDTLAKILGILSPVQGADFLLAGKKLHL 248

Query: 271 SLHQWGKHRDEK 276
           S+H+WG  RD +
Sbjct: 249 SMHEWGTMRDRR 258

[Close]

BLAST of MS013553 vs. ExPASy Swiss-Prot
Match: Q9SN47 (Protein DOG1-like 1 OS=Arabidopsis thaliana OX=3702 GN=DOGL1 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 8.4e-42
Identity = 104/264 (39.39%), Postives = 157/264 (59.47%), Query Frame = 0


Query: 27  TNHEERSRCCFQEWMQIQRQDLSHLLHSLQTFYKTDNDDQIKPLLRDCISHFNDYISTRS 86
           +N E+  + C+ EWM +Q + ++ L  ++ T  K DN  ++  L+R  I  F DY   RS
Sbjct: 6   SNLEKLQQDCYNEWMSLQAKRITELKEAISTGEKDDN--KLLDLIRTAIRDFGDYARKRS 65

Query: 87  RLASVDASPFFAPTWCTSLENSLLWLAGCRPSIFIRLLYAISGSHLEARL---------- 146
             +   +S +FAPTW T LEN+LLW+ GCRPS FIRL+YA+ GS  E RL          
Sbjct: 66  EHSRRFSSNYFAPTWNTCLENALLWMGGCRPSSFIRLVYAMCGSQTEHRLTNFFNNTNHD 125

Query: 147 --HHLLQAQAQPQ---AQAQRLEDLSPAQMARVNALHLRTIREEEKLSGEMASSQEELAD 206
              +L  A  + +      + + DL+  Q+ ++N LHL+T+  E KL+   AS QE+ AD
Sbjct: 126 IDSNLSMALGETRGGIGGGESMSDLTAEQLFKINELHLKTVEAENKLTKVSASLQEDTAD 185

Query: 207 HPIAVIANETEEGEIGEPNGDADKALEDHHRVMHRIMEKADHLRLATLQELLQILQPLQA 266
            PIAV A   E   IG+ +   ++AL+ H   M  ++ +AD LR+ TL +++ IL  +QA
Sbjct: 186 TPIAVAAFYKE--VIGQADVVVERALDKHEEDMGGLLVEADKLRMTTLTKIVDILTAVQA 245

Query: 267 LEFLVAGKKLHLSLHQWGKHRDEK 276
            +FL+AGKKLHL++H+WGK R+ +
Sbjct: 246 ADFLLAGKKLHLAMHEWGKSREHR 265

[Close]

BLAST of MS013553 vs. ExPASy Swiss-Prot
Match: Q58FV0 (Protein DOG1-like 3 OS=Arabidopsis thaliana OX=3702 GN=DOGL3 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.6e-40
Identity = 92/250 (36.80%), Postives = 158/250 (63.20%), Query Frame = 0


Query: 30  EERSRCCFQEWMQIQRQDLSHLLHSLQTFYKTDNDDQIKPLLRDCISHFNDYISTRSRLA 89
           E+  + C+ EWM +Q + +  L  +L + +++  D +++ L+   ++ F  Y   RS L+
Sbjct: 11  EQLQKGCYYEWMSVQAKHIVDLKEALMS-HRSKEDHKLEELVGKIVNDFQKYTEKRSELS 70

Query: 90  SVDASPFFAPTWCTSLENSLLWLAGCRPSIFIRLLYAISGSHLEARL-HHLLQAQAQPQA 149
               S +FAP+W + LEN LLW+ GCRPS FIR++Y++ GS  E +L  +LL+     + 
Sbjct: 71  RRSCSSYFAPSWNSPLENGLLWMGGCRPSSFIRVIYSLCGSQAETQLSQYLLKIDENVEV 130

Query: 150 -QAQRLEDLSPAQMARVNALHLRTIREEEKLSGEMASSQEELADHPIAVIANETEEGEIG 209
                + DL+ +Q+A++N LH++ I +E+K++ + A+ QE +AD PIA+ A  T+     
Sbjct: 131 NHGGSMSDLNASQLAKINDLHIKVIEKEDKITKKSANLQENVADMPIAIAAYATD----- 190

Query: 210 EPNGD--ADKALEDHHRVMHRIMEKADHLRLATLQELLQILQPLQALEFLVAGKKLHLSL 269
             NGD   + AL+ +   M  +M +AD LR  TL++++ ++ P+QA EFL+AGK+LH+SL
Sbjct: 191 LMNGDVVVEDALDKYEEGMAVLMVEADKLRFETLRKIVDVVTPVQAAEFLLAGKRLHISL 250

Query: 270 HQWGKHRDEK 276
           H+WG+ R+E+
Sbjct: 251 HEWGRVREEQ 254

[Close]

BLAST of MS013553 vs. ExPASy Swiss-Prot
Match: Q9SN45 (Protein DOG1-like 2 OS=Arabidopsis thaliana OX=3702 GN=DOGL2 PE=4 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 3.4e-35
Identity = 88/250 (35.20%), Postives = 150/250 (60.00%), Query Frame = 0


Query: 30  EERSRCCFQEWMQIQRQDLSHLLHSLQTFYKTDNDDQIKPLLRDCISHFNDYISTRSRLA 89
           E+  + C+ EWM +Q + +  L  +L    + +NDD+++ L+   ++ ++ Y   RS L+
Sbjct: 10  EKLQKRCYHEWMSLQTKHIDDLKEALMC--QRNNDDKLEDLVGKIVNDYHTYAGKRSELS 69

Query: 90  SVDASPFFAPTWCTSLENSLLWLAGCRPSIFIRLLYAISGSHLEARL-HHLLQAQAQPQA 149
               + +FAP+W T +ENS+LW+ GCRPS FIRL+YA+ GS  E +L  +LL+       
Sbjct: 70  YRCCAHYFAPSWNTPIENSMLWMGGCRPSSFIRLIYALCGSQAETQLSQYLLKIDDDFDI 129

Query: 150 -QAQRLEDLSPAQMARVNALHLRTIREEEKLSGEMASSQEELADHPIAVIANETEEGEIG 209
                + DL+  Q+ ++N LHL  I++E+K++   A+ Q+++AD PIA         ++ 
Sbjct: 130 NHGGFMSDLTATQLGKLNDLHLEVIKKEDKITKTSANFQDDVADLPIA---------DVV 189

Query: 210 EPNGDADKALEDHHRVMHRIMEKADHLRLATLQELLQILQPLQALEFLVAGKKLHLSLHQ 269
             +   + AL+ H   M  ++ +AD LR  TL++++ ++ PLQA+EFL+AGK+L LSLH 
Sbjct: 190 HADVAVEDALDKHEEGMAVLLAEADKLRFETLRKIVDVVTPLQAVEFLLAGKRLQLSLHD 248

Query: 270 WGKHRDEKHG 278
            G+ R +  G
Sbjct: 250 RGRVRADVCG 248

[Close]

BLAST of MS013553 vs. ExPASy Swiss-Prot
Match: Q84JC2 (Protein DOG1-like 4 OS=Arabidopsis thaliana OX=3702 GN=DOGL4 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.2e-10
Identity = 63/246 (25.61%), Postives = 108/246 (43.90%), Query Frame = 0


Query: 30  EERSRCCFQEWMQIQRQDLSHLLHSLQTFY--KTDNDDQIKPLLRDCISHFNDYISTRSR 89
           EE+    ++ W+ IQ   L   LH L   +   T ++ +++ L+    +H   Y + +  
Sbjct: 9   EEKFLEFYESWV-IQ---LELYLHQLLIAHNNNTMSETELRHLISKLTTHHKAYYTAKWA 68

Query: 90  LASVDASPFFAPTWCTSLENSLLWLAGCRPSIFIRLLYAISGSHLEARLHHLLQAQAQPQ 149
               D   FF   W   LEN+  WL G +PS+  R++  +  S +               
Sbjct: 69  AIREDVLAFFGSVWLNPLENACSWLTGWKPSMVFRMVDRLRKSRVV-------------- 128

Query: 150 AQAQRLEDLSPAQMARVNALHLRTIREEEKLSGEMASSQEELADHPIAVIAN-ETEEGEI 209
                   L  AQ+ ++  L ++T  +E+K+  EM   Q  +AD  +  +A      G  
Sbjct: 129 --------LVEAQVKKLEELRVKTKFDEQKIEREMERYQVAMADRKMVELARLGCHVG-- 188

Query: 210 GEPNGDADKALEDHHRVMHRIMEKADHLRLATLQELLQILQPLQALEFLVAGKKLHLSLH 269
           GE     + A+      + ++++ AD +RL TL+ +L IL P Q +EFL A     + L 
Sbjct: 189 GESVMVVEAAVRGLSMGLEKMVKAADCVRLKTLKGILDILTPPQCVEFLAAAATFQVQLR 226

Query: 270 QWGKHR 273
           +WG  R
Sbjct: 249 RWGNRR 226

[Close]

BLAST of MS013553 vs. ExPASy TrEMBL
Match: A0A6J1GT06 (protein DOG1-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111456709 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 2.4e-76
Identity = 156/260 (60.00%), Postives = 199/260 (76.54%), Query Frame = 0


Query: 21  NDDEAI-TNHEERSRCCFQEWMQIQRQDLSHLLHSLQTFYKTDNDDQIKPLLRDCISHFN 80
           +D EA+   H+ RSRCCFQEWMQ+QRQDL+ LL S+   + T NDDQ + L+R+C++HF 
Sbjct: 2   DDGEALEATHQHRSRCCFQEWMQLQRQDLTLLLESI---HNTHNDDQSRTLIRNCLAHFE 61

Query: 81  DYISTRSRLASVDASPFFAPTWCTSLENSLLWLAGCRPSIFIRLLYAISGSHLEARLHHL 140
           DYI+ R R A  DA PFFAPTWCTSLENSLLW+AGCRPSIFIRLLYA+SG  ++ARL   
Sbjct: 62  DYITNRRRFAEEDAFPFFAPTWCTSLENSLLWIAGCRPSIFIRLLYALSGCEVDARLGEW 121

Query: 141 LQA-QAQPQAQAQRLEDLSPAQMARVNALHLRTIREEEKLSGEMASSQEELADHPIAVIA 200
           L+  + +       + +LS +Q+ RVN LH+RT+R EE+   EMAS QEE AD PIAVI 
Sbjct: 122 LEGIRGESGNHHLHVGNLSASQLVRVNGLHMRTVRAEERQGREMASCQEEPADEPIAVIV 181

Query: 201 NETEEGEIGEPNGD-ADKALEDHHRVMHRIMEKADHLRLATLQELLQILQPLQALEFLVA 260
           NE  EG +GE  G+ A++AL++H R M R+MEKAD LRL T++E+++IL+P+QA+EFLVA
Sbjct: 182 NEM-EGVVGEEVGEAAERALKEHEREMRRMMEKADELRLKTIKEVMEILEPVQAVEFLVA 241

Query: 261 GKKLHLSLHQWGKHRDEKHG 278
            KKLHLSLHQWGK RDE+HG
Sbjct: 242 SKKLHLSLHQWGKRRDERHG 257

[Close]

BLAST of MS013553 vs. ExPASy TrEMBL
Match: A0A6J1KLR3 (protein DOG1-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111495712 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.9e-73
Identity = 161/268 (60.07%), Postives = 192/268 (71.64%), Query Frame = 0


Query: 22  DDEAITNHEERSRCCFQEWMQIQRQDLSHLLHSLQTFYKTDNDDQIKPLLRDCISHFNDY 81
           D  + T H+ERSRCCFQEWMQ+QRQDL+ LL SL      ++ ++IK L+R CI+HF DY
Sbjct: 4   DTSSGTTHQERSRCCFQEWMQLQRQDLT-LLQSLHKKPNHNDQEEIKTLIRSCIAHFEDY 63

Query: 82  ISTRSRLASVDASPFFAPTWCTSLENSLLWLAGCRPSIFIRLLYAISGSHLEARLHHLLQ 141
           ISTRS LA  D S FFAPTWCTSLENSLLW+AGCRP+IFIRL+YA+SG  +EARL   L+
Sbjct: 64  ISTRSCLAQEDPSTFFAPTWCTSLENSLLWIAGCRPTIFIRLVYALSGCEVEARLRKWLE 123

Query: 142 AQAQP-----------QAQAQRLEDLSPAQMARVNALHLRTIREEEKLSGEMASSQEELA 201
                            + +  + +LSP QM RV+ LH+RT+R EEKL+ EMAS QEELA
Sbjct: 124 GTRNNNDDNNNNFNSISSGSDSVGELSPTQMRRVDELHMRTLRAEEKLTSEMASLQEELA 183

Query: 202 DHPIAVIANETEEGEIGEPNGDADKALEDHHRVMHRIMEKADHLRLATLQEL-LQILQPL 261
           D PIAVIANE E   I E N +A+ AL++H   M  IMEKAD LRL TL+EL L+IL+P 
Sbjct: 184 DQPIAVIANEME--GIEEMNEEAEMALKEHETAMRGIMEKADELRLNTLKELVLEILKPP 243

Query: 262 QALEFLVAGKKLHLSLHQWGKHRDEKHG 278
           QAL FL A KKLHL LHQWGK RDEKHG
Sbjct: 244 QALHFLAASKKLHLCLHQWGKWRDEKHG 268

[Close]

BLAST of MS013553 vs. ExPASy TrEMBL
Match: A0A6J1EGT4 (protein DOG1-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111434061 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.9e-73
Identity = 159/268 (59.33%), Postives = 193/268 (72.01%), Query Frame = 0


Query: 22  DDEAITNHEERSRCCFQEWMQIQRQDLSHLLHSLQTFYKTDNDDQIKPLLRDCISHFNDY 81
           D  + T H+ERSRCCFQEWMQ+QRQDL+ LL SL      ++ ++IK L+  CI+HF DY
Sbjct: 4   DTSSGTTHQERSRCCFQEWMQLQRQDLT-LLQSLHKKPTHNDHEEIKTLICSCIAHFEDY 63

Query: 82  ISTRSRLASVDASPFFAPTWCTSLENSLLWLAGCRPSIFIRLLYAISGSHLEARLHHLLQ 141
           ISTRSRLA  D S FFAPTWCTSLENSLLW+AGCRP+IF+RL+YA+SG  +EARL   ++
Sbjct: 64  ISTRSRLAQEDPSTFFAPTWCTSLENSLLWIAGCRPTIFVRLVYALSGCEVEARLRKWME 123

Query: 142 AQAQP-----------QAQAQRLEDLSPAQMARVNALHLRTIREEEKLSGEMASSQEELA 201
                            + +  + +LSP QM RV+ LH+RT+R EEKL+ EMAS QEELA
Sbjct: 124 GMRNSNDDNSNNFNSISSGSDSVGELSPTQMKRVDELHMRTLRAEEKLTSEMASLQEELA 183

Query: 202 DHPIAVIANETEEGEIGEPNGDADKALEDHHRVMHRIMEKADHLRLATLQEL-LQILQPL 261
           D PIAVIANE E   IG  N +A+ AL++H   M  IMEKAD LRL TL+EL L+IL+P 
Sbjct: 184 DQPIAVIANEME--GIGVMNEEAEMALKEHETAMRGIMEKADELRLNTLKELALEILKPP 243

Query: 262 QALEFLVAGKKLHLSLHQWGKHRDEKHG 278
           QAL+FL A KKLHL LHQWGK RDEKHG
Sbjct: 244 QALQFLAASKKLHLCLHQWGKWRDEKHG 268

[Close]

BLAST of MS013553 vs. ExPASy TrEMBL
Match: A0A0A0LXS6 (DOG1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G470430 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 4.6e-67
Identity = 148/279 (53.05%), Postives = 193/279 (69.18%), Query Frame = 0


Query: 5   CSSSSSSRSRREVKDNNDDEAITNHEERSRCCFQEWMQIQRQDLSHLLHSLQTFYKTDND 64
           CSSSS+  ++++ +   +D     HEERSRCCF+EWMQ+QR+DL+HLL SL      D  
Sbjct: 7   CSSSSTITTKKKQQQLQEDGFSNTHEERSRCCFEEWMQLQREDLTHLLKSLHQPTNNDTT 66

Query: 65  DQIKPLLRDCISHFNDYISTRSRLASVDASPFFAPTWCTSLENSLLWLAGCRPSIFIRLL 124
                ++R+CISHF  YIS R+ LA    SP FAPTWCTSLENSLLW+AGCRPSIFIRL+
Sbjct: 67  TTTTTVIRNCISHFEHYISNRTLLAQEHPSPLFAPTWCTSLENSLLWMAGCRPSIFIRLI 126

Query: 125 YAISGSHLEARLHHLLQAQAQPQAQAQRLEDLSPAQMARVNALHLRTIREEEKLSGEMAS 184
           YA++    E  + +              + +LSP+QM RVN LH+RTI+ EEKL+ E+AS
Sbjct: 127 YALTSCSSEPLITN-DDDNKNGNNTVTSIGELSPSQMTRVNGLHMRTIKAEEKLTSELAS 186

Query: 185 SQEELADHPIAVIANETEEGEIGEP-------NGDADKALEDHHRVMHRIMEKADHLRLA 244
            QEELAD PIA+IA    +G+ G+        N +A+ AL++H +VM +++ KAD LRL 
Sbjct: 187 WQEELADEPIALIA---AKGDCGDEVVLNNMMNEEAEMALKEHEKVMGKVIGKADELRLN 246

Query: 245 TLQEL-LQILQPLQALEFLVAGKKLHLSLHQWGKHRDEK 276
           T++EL L+IL+P QAL+FLVA KKLHLSLHQWGK RDEK
Sbjct: 247 TMKELVLEILKPTQALQFLVASKKLHLSLHQWGKRRDEK 281

[Close]

BLAST of MS013553 vs. ExPASy TrEMBL
Match: A0A5A7UU20 (Transcription factor HBP-1b(C38)-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002330 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.5e-62
Identity = 148/284 (52.11%), Postives = 195/284 (68.66%), Query Frame = 0


Query: 1   MAMD--CSSSSSSRSRREVKDNNDDEAITNHEERSRCCFQEWMQIQRQDLSHLLHSLQTF 60
           MA D  CSSSS++ ++++ +   +    T HEER R CF+EWMQ+QR+DL+HLL SL   
Sbjct: 1   MATDDMCSSSSTTTTKKKQQQEEESGLSTTHEERCRRCFEEWMQLQREDLTHLLESLH-- 60

Query: 61  YKTDNDDQ-----IKPLLRDCISHFNDYISTRSRLASVDASPFFAPTWCTSLENSLLWLA 120
             T+N+ Q        ++R+CISHF+ YIS R+ LA    SP FAPTWCTSLE SLLW+A
Sbjct: 61  QPTNNNSQETNNTTSTVIRNCISHFDHYISKRNLLAQEYPSPLFAPTWCTSLEKSLLWMA 120

Query: 121 GCRPSIFIRLLYAISGSHLEARLHHLLQAQAQPQAQAQRLEDLSPAQMARVNALHLRTIR 180
           GCRPSIFIRL YA++    E   +       +       + +LSP+QM RVN LH+RTI+
Sbjct: 121 GCRPSIFIRLTYALTSCSTEPLTN---DGDNKNSDSFIGIGELSPSQMTRVNGLHMRTIK 180

Query: 181 EEEKLSGEMASSQEELADHPIAVIANETEEG-EIGEPNGDADKALEDHHRVMHRIMEKAD 240
            E+KL+ E+AS QEELAD PIAVI  + + G E+   N +A+ AL++H +VM  ++ KAD
Sbjct: 181 AEQKLTDELASWQEELADDPIAVIVAKGDCGDEVVMNNEEAEMALKEHEKVMGEVIGKAD 240

Query: 241 HLRLATLQEL-LQILQPLQALEFLVAGKKLHLSLHQWGKHRDEK 276
            LRL T++EL L+IL+P QAL+FLVA KKL LSLHQWGK RDEK
Sbjct: 241 KLRLNTMKELVLEILKPTQALQFLVASKKLQLSLHQWGKRRDEK 279

[Close]

BLAST of MS013553 vs. TAIR 10
Match: AT5G45830.1 (delay of germination 1 )

HSP 1 Score: 186.0 bits (471), Expect = 4.0e-47
Identity = 104/252 (41.27%), Postives = 160/252 (63.49%), Query Frame = 0


Query: 31  ERSRCCFQEWMQIQRQ---DLSHLLHSLQTFYKTDNDDQIKPLLRDCISHFNDYISTRSR 90
           E+++  + EWM +Q Q   +L  LL   ++    DND++++ L    I  F +Y + R+ 
Sbjct: 9   EQAQDSYLEWMSLQSQRIPELKQLLAQRRSHGDEDNDNKLRKLTGKIIGDFKNYAAKRAD 68

Query: 91  LASVDASPFFAPTWCTSLENSLLWLAGCRPSIFIRLLYAISGSHLEARLHHLLQ----AQ 150
           LA   +S ++APTW + LEN+L+W+ GCRPS F RL+YA+ GS  E R+   L+     +
Sbjct: 69  LAHRCSSNYYAPTWNSPLENALIWMGGCRPSSFFRLVYALCGSQTEIRVTQFLRNIDGYE 128

Query: 151 AQPQAQAQRLEDLSPAQMARVNALHLRTIREEEKLSGEMASSQEELADHPIAVIANETEE 210
           +        L DLS  Q+A++N LH++ I EEEK++ +++S QE+ AD PIA +A E E 
Sbjct: 129 SSGGGGGASLSDLSAEQLAKINVLHVKIIDEEEKMTKKVSSLQEDAADIPIATVAYEME- 188

Query: 211 GEIGEPNGDADKALEDHHRVMHRIMEKADHLRLATLQELLQILQPLQALEFLVAGKKLHL 270
             +GEPN   D+AL+     M R++ +AD+LR+ TL ++L IL P+Q  +FL+AGKKLHL
Sbjct: 189 -NVGEPNVVVDQALDKQEEAMARLLVEADNLRVDTLAKILGILSPVQGADFLLAGKKLHL 248

Query: 271 SLHQWGKHRDEK 276
           S+H+WG  RD +
Sbjct: 249 SMHEWGTMRDRR 258

[Close]

BLAST of MS013553 vs. TAIR 10
Match: AT4G18690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18680.1); Has 522 Blast hits to 522 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 513; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-41
Identity = 92/250 (36.80%), Postives = 158/250 (63.20%), Query Frame = 0


Query: 30  EERSRCCFQEWMQIQRQDLSHLLHSLQTFYKTDNDDQIKPLLRDCISHFNDYISTRSRLA 89
           E+  + C+ EWM +Q + +  L  +L + +++  D +++ L+   ++ F  Y   RS L+
Sbjct: 11  EQLQKGCYYEWMSVQAKHIVDLKEALMS-HRSKEDHKLEELVGKIVNDFQKYTEKRSELS 70

Query: 90  SVDASPFFAPTWCTSLENSLLWLAGCRPSIFIRLLYAISGSHLEARL-HHLLQAQAQPQA 149
               S +FAP+W + LEN LLW+ GCRPS FIR++Y++ GS  E +L  +LL+     + 
Sbjct: 71  RRSCSSYFAPSWNSPLENGLLWMGGCRPSSFIRVIYSLCGSQAETQLSQYLLKIDENVEV 130

Query: 150 -QAQRLEDLSPAQMARVNALHLRTIREEEKLSGEMASSQEELADHPIAVIANETEEGEIG 209
                + DL+ +Q+A++N LH++ I +E+K++ + A+ QE +AD PIA+ A  T+     
Sbjct: 131 NHGGSMSDLNASQLAKINDLHIKVIEKEDKITKKSANLQENVADMPIAIAAYATD----- 190

Query: 210 EPNGD--ADKALEDHHRVMHRIMEKADHLRLATLQELLQILQPLQALEFLVAGKKLHLSL 269
             NGD   + AL+ +   M  +M +AD LR  TL++++ ++ P+QA EFL+AGK+LH+SL
Sbjct: 191 LMNGDVVVEDALDKYEEGMAVLMVEADKLRFETLRKIVDVVTPVQAAEFLLAGKRLHISL 250

Query: 270 HQWGKHRDEK 276
           H+WG+ R+E+
Sbjct: 251 HEWGRVREEQ 254

[Close]

BLAST of MS013553 vs. TAIR 10
Match: AT4G18680.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18690.1); Has 361 Blast hits to 361 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 353; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 139.0 bits (349), Expect = 5.6e-33
Identity = 84/239 (35.15%), Postives = 143/239 (59.83%), Query Frame = 0


Query: 41  MQIQRQDLSHLLHSLQTFYKTDNDDQIKPLLRDCISHFNDYISTRSRLASVDASPFFAPT 100
           M +Q + +  L  +L    + +NDD+++ L+   ++ ++ Y   RS L+    + +FAP+
Sbjct: 1   MSLQTKHIDDLKEALMC--QRNNDDKLEDLVGKIVNDYHTYAGKRSELSYRCCAHYFAPS 60

Query: 101 WCTSLENSLLWLAGCRPSIFIRLLYAISGSHLEARL-HHLLQAQAQPQA-QAQRLEDLSP 160
           W T +ENS+LW+ GCRPS FIRL+YA+ GS  E +L  +LL+            + DL+ 
Sbjct: 61  WNTPIENSMLWMGGCRPSSFIRLIYALCGSQAETQLSQYLLKIDDDFDINHGGFMSDLTA 120

Query: 161 AQMARVNALHLRTIREEEKLSGEMASSQEELADHPIAVIANETEEGEIGEPNGDADKALE 220
            Q+ ++N LHL  I++E+K++   A+ Q+++AD PIA         ++   +   + AL+
Sbjct: 121 TQLGKLNDLHLEVIKKEDKITKTSANFQDDVADLPIA---------DVVHADVAVEDALD 180

Query: 221 DHHRVMHRIMEKADHLRLATLQELLQILQPLQALEFLVAGKKLHLSLHQWGKHRDEKHG 278
            H   M  ++ +AD LR  TL++++ ++ PLQA+EFL+AGK+L LSLH  G+ R +  G
Sbjct: 181 KHEEGMAVLLAEADKLRFETLRKIVDVVTPLQAVEFLLAGKRLQLSLHDRGRVRADVCG 228

[Close]

BLAST of MS013553 vs. TAIR 10
Match: AT4G18660.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18690.1); Has 115 Blast hits to 115 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.7 bits (239), Expect = 3.2e-20
Identity = 53/125 (42.40%), Postives = 83/125 (66.40%), Query Frame = 0


Query: 151 QRLEDLSPAQMARVNALHLRTIREEEKLSGEMASSQEELADHPIAVIANETEEGEIGEPN 210
           + + DL+  Q+ ++N LHL+T+  E KL+   AS QE+ AD PIAV A   E   IG+ +
Sbjct: 14  ESMSDLTAEQLFKINELHLKTVEAENKLTKVSASLQEDTADTPIAVAAFYKE--VIGQAD 73

Query: 211 GDADKALEDHHRVMHRIMEKADHLRLATLQELLQILQPLQALEFLVAGKKLHLSLHQWGK 270
              ++AL+ H   M  ++ +AD LR+ TL +++ IL  +QA +FL+AGKKLHL++H+WGK
Sbjct: 74  VVVERALDKHEEDMGGLLVEADKLRMTTLTKIVDILTAVQAADFLLAGKKLHLAMHEWGK 133

Query: 271 HRDEK 276
            R+ +
Sbjct: 134 SREHR 136

[Close]

BLAST of MS013553 vs. TAIR 10
Match: AT3G14880.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT4G18650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 93.6 bits (231), Expect = 2.7e-19
Identity = 65/241 (26.97%), Postives = 115/241 (47.72%), Query Frame = 0


Query: 38  QEWMQIQRQDLSHLLHSLQTFYK---TDNDDQIKPLLRDCISHFNDYISTRSRLASVDAS 97
           Q W++  R  L+H L S Q  ++   T ++++++  +   + HF +Y   +      D  
Sbjct: 15  QSWIEQLRNHLNH-LRSAQNHHRNSATGDEERLREAVDRVMEHFREYHRAKWAATDKDVI 74

Query: 98  PFFAPTWCTSLENSLLWLAGCRPSIFIRLLYAISGSHLEARLHHLLQAQAQPQAQAQRLE 157
              A  W ++LE SL W+ G RP+    L+Y  S    E+R+  +L+       +   L 
Sbjct: 75  EVMASPWASALERSLQWVGGWRPTTLFHLVYTESSILFESRIVDILRG-----FRTGDLS 134

Query: 158 DLSPAQMARVNALHLRTIREEEKLSGEMASSQEELADHPIAVIANETEEGEIGEPNGDAD 217
           DLSP+Q   V+ L   T++EE  ++ E++  Q++ +D  +               + D D
Sbjct: 135 DLSPSQFRTVSELQCETVKEENAITEELSEWQDDASDLVMGT-------------SSDPD 194

Query: 218 KALEDHHRVMHRIMEKADHLRLATLQELLQILQPLQALEFLVAGKKLHLSLHQWGKHRDE 276
           + +     ++HR     D LRL T+  ++++L PLQ  EFLVA  +L   +  WG   D 
Sbjct: 195 QRIRRLAEIVHR----TDDLRLRTITRVVEVLSPLQQAEFLVAAAELRTGVAGWGTSHDR 232

The following BLAST results are available for this feature:

BLAST of MS013553 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895667.1	1.0e-76	59.04	protein DELAY OF GERMINATION 1 [Benincasa hispida]	[more]
KAG6573313.1	1.7e-76	60.38	Protein DOG1-like 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022954444.1	5.0e-76	60.00	protein DOG1-like 1 [Cucurbita moschata]	[more]
XP_023520222.1	1.8e-73	59.70	protein DOG1-like 1 [Cucurbita pepo subsp. pepo]	[more]
KAG6583954.1	1.8e-73	60.15	Protein DOG1-like 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MS013553 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0SVK0	5.6e-46	41.27	Protein DELAY OF GERMINATION 1 OS=Arabidopsis thaliana OX=3702 GN=DOG1 PE=1 SV=1	[more]
Q9SN47	8.4e-42	39.39	Protein DOG1-like 1 OS=Arabidopsis thaliana OX=3702 GN=DOGL1 PE=2 SV=1	[more]
Q58FV0	1.6e-40	36.80	Protein DOG1-like 3 OS=Arabidopsis thaliana OX=3702 GN=DOGL3 PE=2 SV=1	[more]
Q9SN45	3.4e-35	35.20	Protein DOG1-like 2 OS=Arabidopsis thaliana OX=3702 GN=DOGL2 PE=4 SV=2	[more]
Q84JC2	2.2e-10	25.61	Protein DOG1-like 4 OS=Arabidopsis thaliana OX=3702 GN=DOGL4 PE=1 SV=1	[more]

BLAST of MS013553 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GT06	2.4e-76	60.00	protein DOG1-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111456709 PE=4 SV=1	[more]
A0A6J1KLR3	1.9e-73	60.07	protein DOG1-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111495712 PE=4 SV=1	[more]
A0A6J1EGT4	1.9e-73	59.33	protein DOG1-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111434061 PE=4 SV=1	[more]
A0A0A0LXS6	4.6e-67	53.05	DOG1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G470430 PE=4 S...	[more]
A0A5A7UU20	1.5e-62	52.11	Transcription factor HBP-1b(C38)-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of MS013553 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45830.1	4.0e-47	41.27	delay of germination 1	[more]
AT4G18690.1	1.1e-41	36.80	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G18680.1	5.6e-33	35.15	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G18660.1	3.2e-20	42.40	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G14880.2	2.7e-19	26.97	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; BES...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025422	Transcription factor TGA like domain	PFAM	PF14144	DOG1	coord: 49..125 e-value: 6.8E-23 score: 80.7
IPR025422	Transcription factor TGA like domain	PROSITE	PS51806	DOG1	coord: 30..275 score: 31.49296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR46354:SF7	PROTEIN DOG1-LIKE 1	coord: 28..277
None	No IPR available	PANTHER	PTHR46354	FAMILY NOT NAMED	coord: 28..277

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013553.1	MS013553.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding