MS013505 (gene) Bitter gourd (TR) v1

Overview


Name	MS013505
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Coatomer subunit zeta
Location	scaffold402: 2036466 .. 2039037 (+)
RNA-Seq Expression	MS013505
Synteny	MS013505

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACAGGAATCTTGCCCTTCCATTAAAAACATTCTTCTTTTGGATTCCGAAGGGAAACGTGTAGCTGTCAAGTATTATTCAGATGACTGGCCTACAAATAGTGCAAAGGAAGCTTTTGAGAAAGCCGTTTTCACCAAAACTCAGAAGACGAATGCTCGAACAGAGGGTTGTTACTTTTTCATGTATCAGTCTTTAACTGTTTTTTCTTTTAGTCTTTGTCCTTAATCATATCAGCTCCTTCTATTTAATTCAATTTCAATGTCATTTTAATCACGATAAAGTAGCTTCTGAATCTTTTAGTAAAATTATTTGATTTGGTTTATCCATAATCATTGTTTTGTATCATAAGAAATAAGAATAAGAATTATTTTTTCAATCACATTATCGTGACTATTAGTAGCACGGGTTAGTCATTCGACTTTGAAAGTCTATTTTGGTCTCAGCATTCGTATCCCAAAAAAAAAAAAAAAAAAAAAAAATCTCCACATGCTGTTAGACCATCTACCACTACCAGTCTAGTAACATTTTGTAGAATACAATGCTTTTTATGCCTTATATGATTGGAAAATTCCTTTTCTACATGCTAACTTGGTATCTACTGTTCTTATACAGCGGAGATAGCAATGTTTGAAAACAATATAGTGGTTTACAAGTTTGTTCAAGACCTTCATTTTTTTGTTACGGGTGGAGAAGATGAAAATGAGCTCATTTTAGCATCCGTTCTTCAGGGATTTTTTGATGCTGTGGGCATTCTTCTTAGGTCTTGAGACTATTTTCATTTTTTGGATCCTTATGTGCTGGCCCGTACTACTGTTCTTGATCATAGTGTTCTTAGATATTTATCTTTGTTTCTTCTATTCCAGGGGTAATGTAGAAAAGAAGGAGGCACTTGAGAACTTGGACCTCATTTTACTATGTCTCGATGAAATTATCGACGGAGGGTATGTCTCATTAGCTTATTTCCTCATACCTTCATTTGCTGCATTTCAATTGTGTTACCCCGTTCTTCTATTTCCTTCTATTGATCAATCTTCTGTACTTTGATTGTGCCATTTTTACATTTACTACCCTCTTTAAGTTCATGGCCATGCCTATTGTAAACATGAAAATGGAAGCATGGGTTGTTAGATGATTATATCGCAATAATCTATGGTAGCAGTACTTAAATGTCATTACTCATCAGGAAAGAATAGTTTCATGAATACGTGGAAAAAAATTTGTAGATGAATGAGGAATATGCGTTCATTGTAGTTGCGAAACTGCTATAAAATAGTCTAAGAGTTTGTCACCTATTGAAGTACTGGTTTATCTTGACATGGTGGTTTGTTGCTGGATAAGAGATTTGGCCGTCTCACCTCTCCATTTCGATTATGTCACTAGTGAATTGTTTACACAAGTTTATGGAAAAACTTCTGGTAATTATGATGATAATGGTAACCATCATGGGATGGCTCAAGTGGTCAACGAGGGCCAATGTAAATAGCAAAGGACTTAGAGGGAATGAGTTCAAACCATGGTGGCCACCTACCTAGAATTTAATATCCTACGAGTTTCCTTGTCAACCAAATGTTAGTAGGGTCAGGCGGTTGGCCCGTGAATAGTCGAGGTGCTCGCAAGCTGGCCCGAACACATGGATATCAAAAAAAAAAATTATGATGATAATGGTAGATGACATTATGTAACGAAACATAAATCCCAACAAACAAAATCTCTGGTTTACTTATTTATTTTTTTTGGTTCAAACACATGTAGGGACGAGGATTCAAATCTCGAGGATATATGTTTAACCAATTGAGTGATATTGAGGTTGACGTATATGTTTACTTCTTTAAAATTTTTGTCTGGTTGCTAGAGTTTAGGTGGCTCAACTTGATGGACCCTCTCTTCGCCAACGCCAACCACAAAAAAATAAGTGAACACATAACCGGATAATAGAGGCCTTGCGTGGATTAACTCAAACGGATAATTTTACCAATGGTTGTTTTATTCATGAGATCAGAAAGTTACCAATTGCTTTTTGTAATTATTTAAAACTCCTCTTCACATGTGTACTGGTAACCAAATTCTAATGGAAACTACAAACAATTTAATTTGACTGATTTATTCCTCAAGGTTATTCTAGAATAGATTCCTTTTCAACTGAATATCCAAGTGGTTTGCTGTTTTCACTGCCCCATGTGAAGGGAATTATCACTTTGCTTTTGTAAAATTGCAATGCAGTAGTATTATACTTTCGTTTTACAAATCATGTTGGCATTATGGAACCACGTTAATTGCAGAAGAAAGTGGTTACTCTTTTCTATTAGTGTTTTAATGGTTTTTTTTTTCTTTCGTGCAGCATTATTCTCGAGACAGATGCAAATGTCATTGCAGGGAAGGTCGCAAGTCATAGCATTGACACTGGTGCTCCTTTGTCTGAACAGGTACACAATAATTCAGATTCTTTTTCCTTTCACTTTTCTCCCTTATATTTTCCAGCATCTTTAAAAGTTGTTTCTCGCTCCTGCTCTTGCAGACAATAAGTCAGGCATTGGCCACAGCTCGCGAACATCTAGCAAGATCTCTTCTTAAA

mRNA sequence

ATACAGGAATCTTGCCCTTCCATTAAAAACATTCTTCTTTTGGATTCCGAAGGGAAACGTGTAGCTGTCAAGTATTATTCAGATGACTGGCCTACAAATAGTGCAAAGGAAGCTTTTGAGAAAGCCGTTTTCACCAAAACTCAGAAGACGAATGCTCGAACAGAGGCGGAGATAGCAATGTTTGAAAACAATATAGTGGTTTACAAGTTTGTTCAAGACCTTCATTTTTTTGTTACGGGTGGAGAAGATGAAAATGAGCTCATTTTAGCATCCGTTCTTCAGGGATTTTTTGATGCTGTGGGCATTCTTCTTAGGGGTAATGTAGAAAAGAAGGAGGCACTTGAGAACTTGGACCTCATTTTACTATGTCTCGATGAAATTATCGACGGAGGCATTATTCTCGAGACAGATGCAAATGTCATTGCAGGGAAGGTCGCAAGTCATAGCATTGACACTGGTGCTCCTTTGTCTGAACAGACAATAAGTCAGGCATTGGCCACAGCTCGCGAACATCTAGCAAGATCTCTTCTTAAA

Coding sequence (CDS)

ATACAGGAATCTTGCCCTTCCATTAAAAACATTCTTCTTTTGGATTCCGAAGGGAAACGTGTAGCTGTCAAGTATTATTCAGATGACTGGCCTACAAATAGTGCAAAGGAAGCTTTTGAGAAAGCCGTTTTCACCAAAACTCAGAAGACGAATGCTCGAACAGAGGCGGAGATAGCAATGTTTGAAAACAATATAGTGGTTTACAAGTTTGTTCAAGACCTTCATTTTTTTGTTACGGGTGGAGAAGATGAAAATGAGCTCATTTTAGCATCCGTTCTTCAGGGATTTTTTGATGCTGTGGGCATTCTTCTTAGGGGTAATGTAGAAAAGAAGGAGGCACTTGAGAACTTGGACCTCATTTTACTATGTCTCGATGAAATTATCGACGGAGGCATTATTCTCGAGACAGATGCAAATGTCATTGCAGGGAAGGTCGCAAGTCATAGCATTGACACTGGTGCTCCTTTGTCTGAACAGACAATAAGTCAGGCATTGGCCACAGCTCGCGAACATCTAGCAAGATCTCTTCTTAAA

Protein sequence

IQESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILLCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK

Homology

[Close]

BLAST of MS013505 vs. NCBI nr
Match: XP_022139792.1 (coatomer subunit zeta-1-like [Momordica charantia])

HSP 1 Score: 339.0 bits (868), Expect = 2.5e-89
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 3   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 62
           ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE
Sbjct: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 61

Query: 63  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122
           NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL
Sbjct: 62  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121

Query: 123 CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 179
           CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK
Sbjct: 122 CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of MS013505 vs. NCBI nr
Match: XP_023542942.1 (coatomer subunit zeta-2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 339.0 bits (868), Expect = 2.5e-89
Identity = 175/178 (98.31%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   IQESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAM 60
           +QESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAM
Sbjct: 1   MQESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAM 60

Query: 61  FENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLI 120
           FENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVG+LLRGNVEKKEALENLDLI
Sbjct: 61  FENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGLLLRGNVEKKEALENLDLI 120

Query: 121 LLCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 179
           LLCLDEIIDGGIILETDANVIAGKVASHSID+GAPLSEQTISQALATAREHLARSLLK
Sbjct: 121 LLCLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 178

[Close]

BLAST of MS013505 vs. NCBI nr
Match: XP_022954696.1 (coatomer subunit zeta-2-like isoform X1 [Cucurbita moschata] >XP_022994905.1 coatomer subunit zeta-2-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 337.4 bits (864), Expect = 7.4e-89
Identity = 174/178 (97.75%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   IQESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAM 60
           +QESCPSIKNILLLDSEGKRVAVKYYSDDWPTNS KEAFEKAVFTKTQKTNARTEAEIAM
Sbjct: 1   MQESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFTKTQKTNARTEAEIAM 60

Query: 61  FENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLI 120
           FENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVG+LLRGNVEKKEALENLDLI
Sbjct: 61  FENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGLLLRGNVEKKEALENLDLI 120

Query: 121 LLCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 179
           LLCLDEIIDGGIILETDANVIAGKVASHSID+GAPLSEQTISQALATAREHLARSLLK
Sbjct: 121 LLCLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 178

[Close]

BLAST of MS013505 vs. NCBI nr
Match: XP_023542943.1 (coatomer subunit zeta-1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 336.7 bits (862), Expect = 1.3e-88
Identity = 174/176 (98.86%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 3   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 62
           ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE
Sbjct: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 61

Query: 63  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122
           NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVG+LLRGNVEKKEALENLDLILL
Sbjct: 62  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGLLLRGNVEKKEALENLDLILL 121

Query: 123 CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 179
           CLDEIIDGGIILETDANVIAGKVASHSID+GAPLSEQTISQALATAREHLARSLLK
Sbjct: 122 CLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of MS013505 vs. NCBI nr
Match: XP_038895635.1 (coatomer subunit zeta-2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 335.9 bits (860), Expect = 2.1e-88
Identity = 174/178 (97.75%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 1   IQESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAM 60
           +QESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVF KTQKTNARTEAEIAM
Sbjct: 1   MQESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAM 60

Query: 61  FENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLI 120
           FENNIVVYKF QDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLI
Sbjct: 61  FENNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLI 120

Query: 121 LLCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 179
           LLCLDEIIDGGIILETDANVIAGKVASHSID+GAPLSEQTISQALATAREHLARSLLK
Sbjct: 121 LLCLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 178

[Close]

BLAST of MS013505 vs. ExPASy Swiss-Prot
Match: Q6Z844 (Coatomer subunit zeta-2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ2 PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.7e-75
Identity = 141/177 (79.66%), Postives = 164/177 (92.66%), Query Frame = 0


Query: 2   QESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMF 61
           +ESCPS+KNILLLDSEGKRVAVKY+SDDW +N++K AFEK+VFTKT KTNAR+EAEI +F
Sbjct: 6   KESCPSVKNILLLDSEGKRVAVKYFSDDWSSNASKLAFEKSVFTKTLKTNARSEAEITLF 65

Query: 62  ENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLIL 121
           +  IVVYKFVQDLHFFVT G+DENELI+A+VLQGF D+VG+LLRG+VEK+ ALENLDLIL
Sbjct: 66  DGYIVVYKFVQDLHFFVTAGDDENELIIANVLQGFSDSVGLLLRGDVEKRTALENLDLIL 125

Query: 122 LCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 179
           LC+DEI+DGGIILETDAN IAGKVA++++D  AP SEQTISQALATAREHLARSLLK
Sbjct: 126 LCIDEIVDGGIILETDANTIAGKVATNAVDGSAPFSEQTISQALATAREHLARSLLK 182

[Close]

BLAST of MS013505 vs. ExPASy Swiss-Prot
Match: Q940S5 (Coatomer subunit zeta-1 OS=Arabidopsis thaliana OX=3702 GN=At1g60970 PE=2 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 1.8e-74
Identity = 142/173 (82.08%), Postives = 155/173 (89.60%), Query Frame = 0


Query: 6   PSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFENNI 65
           P +KNILLLDSEGKRVAVKYYSDDWPTNSA+EAFEK+VFTKTQKTNARTE E+   ENNI
Sbjct: 5   PKVKNILLLDSEGKRVAVKYYSDDWPTNSAQEAFEKSVFTKTQKTNARTEVEVTALENNI 64

Query: 66  VVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILLCLD 125
           VVYKFVQDLHFFVTGGE+ENELILASVL+G FDAV +LLR NV+K+EAL+NLDLI L  D
Sbjct: 65  VVYKFVQDLHFFVTGGEEENELILASVLEGLFDAVTLLLRSNVDKREALDNLDLIFLSFD 124

Query: 126 EIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 179
           EIIDGGI+LETDANVIAGK   +S D  APLSEQTISQALATAREHL RSL+K
Sbjct: 125 EIIDGGIVLETDANVIAGKAGINSTDPNAPLSEQTISQALATAREHLTRSLMK 177

[Close]

BLAST of MS013505 vs. ExPASy Swiss-Prot
Match: Q84LG4 (Coatomer subunit zeta-2 OS=Arabidopsis thaliana OX=3702 GN=At3g09800 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.0e-72
Identity = 137/175 (78.29%), Postives = 155/175 (88.57%), Query Frame = 0


Query: 3   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 62
           +SCP +KNILLLDSEGKRVAVKYYSDDWPTN+AK +FEK VF+KT KTNARTEAEI + +
Sbjct: 4   DSCPLVKNILLLDSEGKRVAVKYYSDDWPTNAAKLSFEKYVFSKTSKTNARTEAEITLLD 63

Query: 63  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122
           +NI+VYKF QDLHFFVTGGE+ENELILASVLQGFFDAV +LLR NVEK EALENLDLI L
Sbjct: 64  SNIIVYKFAQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFL 123

Query: 123 CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLL 178
           CLDE++D G++LETD NVIAGKVA  S +    LSEQT++QALATAREHLARSLL
Sbjct: 124 CLDEMVDQGVVLETDPNVIAGKVAMQSTEASGSLSEQTLTQALATAREHLARSLL 178

[Close]

BLAST of MS013505 vs. ExPASy Swiss-Prot
Match: Q8H1F4 (Coatomer subunit zeta-3 OS=Arabidopsis thaliana OX=3702 GN=At4g08520 PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 3.8e-72
Identity = 137/175 (78.29%), Postives = 155/175 (88.57%), Query Frame = 0


Query: 3   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 62
           +SCP +KNILLLDSEGKRVAVKYYSDDW TN++K AFEK VF+KT KTNARTEAEI + E
Sbjct: 6   DSCPLVKNILLLDSEGKRVAVKYYSDDWATNASKLAFEKYVFSKTSKTNARTEAEITLLE 65

Query: 63  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122
           +NIVVYKF QDLHFFVTGGE+ENEL+L+SVLQGFFDAV +LLR NVEK EALENLDLI L
Sbjct: 66  SNIVVYKFAQDLHFFVTGGENENELVLSSVLQGFFDAVALLLRNNVEKMEALENLDLIFL 125

Query: 123 CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLL 178
           CLDE++D G++LETDANVIAGKVA  S +    LSEQT++QALATAREHLARSLL
Sbjct: 126 CLDEMVDQGMVLETDANVIAGKVAMQSAEASGSLSEQTLTQALATAREHLARSLL 180

[Close]

BLAST of MS013505 vs. ExPASy Swiss-Prot
Match: Q9MAX5 (Coatomer subunit zeta-1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ1 PE=2 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.3e-69
Identity = 133/175 (76.00%), Postives = 152/175 (86.86%), Query Frame = 0


Query: 3   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 62
           ESCPS+KNILLLDSEGKRVAVKYY+DDWPT SAK AFEK+VF KTQK  A  EAEI MF+
Sbjct: 2   ESCPSVKNILLLDSEGKRVAVKYYTDDWPTLSAKLAFEKSVFVKTQKATAGAEAEIVMFD 61

Query: 63  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122
            +IVVYKF+QDLHFFVTGGE+ENELILASVLQGF DAV I+LR NV+K+ ALENLDLILL
Sbjct: 62  GHIVVYKFIQDLHFFVTGGEEENELILASVLQGFTDAVDIILRNNVDKRTALENLDLILL 121

Query: 123 CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLL 178
           CLDEI+DGGI+LET+ +VIA KV++H I+    L+EQTI QAL TAREHL +SLL
Sbjct: 122 CLDEIVDGGIVLETEGSVIAEKVSAHGIEGATSLAEQTIVQALTTAREHLTKSLL 176

[Close]

BLAST of MS013505 vs. ExPASy TrEMBL
Match: A0A6J1CEY0 (Coatomer subunit zeta OS=Momordica charantia OX=3673 GN=LOC111010622 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.2e-89
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 3   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 62
           ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE
Sbjct: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 61

Query: 63  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122
           NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL
Sbjct: 62  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 121

Query: 123 CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 179
           CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK
Sbjct: 122 CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of MS013505 vs. ExPASy TrEMBL
Match: A0A6J1K2M3 (Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111490490 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.6e-89
Identity = 174/178 (97.75%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   IQESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAM 60
           +QESCPSIKNILLLDSEGKRVAVKYYSDDWPTNS KEAFEKAVFTKTQKTNARTEAEIAM
Sbjct: 1   MQESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFTKTQKTNARTEAEIAM 60

Query: 61  FENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLI 120
           FENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVG+LLRGNVEKKEALENLDLI
Sbjct: 61  FENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGLLLRGNVEKKEALENLDLI 120

Query: 121 LLCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 179
           LLCLDEIIDGGIILETDANVIAGKVASHSID+GAPLSEQTISQALATAREHLARSLLK
Sbjct: 121 LLCLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 178

[Close]

BLAST of MS013505 vs. ExPASy TrEMBL
Match: A0A6J1GRL4 (Coatomer subunit zeta OS=Cucurbita moschata OX=3662 GN=LOC111456877 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.6e-89
Identity = 174/178 (97.75%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   IQESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAM 60
           +QESCPSIKNILLLDSEGKRVAVKYYSDDWPTNS KEAFEKAVFTKTQKTNARTEAEIAM
Sbjct: 1   MQESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFTKTQKTNARTEAEIAM 60

Query: 61  FENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLI 120
           FENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVG+LLRGNVEKKEALENLDLI
Sbjct: 61  FENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGLLLRGNVEKKEALENLDLI 120

Query: 121 LLCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 179
           LLCLDEIIDGGIILETDANVIAGKVASHSID+GAPLSEQTISQALATAREHLARSLLK
Sbjct: 121 LLCLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 178

[Close]

BLAST of MS013505 vs. ExPASy TrEMBL
Match: A0A6J1K0K6 (Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111490490 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.8e-88
Identity = 173/176 (98.30%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 3   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 62
           ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNS KEAFEKAVFTKTQKTNARTEAEIAMFE
Sbjct: 2   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSTKEAFEKAVFTKTQKTNARTEAEIAMFE 61

Query: 63  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122
           NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVG+LLRGNVEKKEALENLDLILL
Sbjct: 62  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGLLLRGNVEKKEALENLDLILL 121

Query: 123 CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 179
           CLDEIIDGGIILETDANVIAGKVASHSID+GAPLSEQTISQALATAREHLARSLLK
Sbjct: 122 CLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 177

[Close]

BLAST of MS013505 vs. ExPASy TrEMBL
Match: A0A6J1EIB5 (Coatomer subunit zeta OS=Cucurbita moschata OX=3662 GN=LOC111434347 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.8e-88
Identity = 174/178 (97.75%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 1   IQESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAM 60
           +QESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVF KTQKTNARTEAEIAM
Sbjct: 1   MQESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFIKTQKTNARTEAEIAM 60

Query: 61  FENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLI 120
           FENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLR NVEKKEALENLDLI
Sbjct: 61  FENNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRSNVEKKEALENLDLI 120

Query: 121 LLCLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 179
           LLCLDEIIDGGIILETDANVIAGKVASHSID+GAPLSEQTISQALATAREHLARSLLK
Sbjct: 121 LLCLDEIIDGGIILETDANVIAGKVASHSIDSGAPLSEQTISQALATAREHLARSLLK 178

[Close]

BLAST of MS013505 vs. TAIR 10
Match: AT1G60970.1 (SNARE-like superfamily protein )

HSP 1 Score: 280.0 bits (715), Expect = 1.3e-75
Identity = 142/173 (82.08%), Postives = 155/173 (89.60%), Query Frame = 0


Query: 6   PSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFENNI 65
           P +KNILLLDSEGKRVAVKYYSDDWPTNSA+EAFEK+VFTKTQKTNARTE E+   ENNI
Sbjct: 5   PKVKNILLLDSEGKRVAVKYYSDDWPTNSAQEAFEKSVFTKTQKTNARTEVEVTALENNI 64

Query: 66  VVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILLCLD 125
           VVYKFVQDLHFFVTGGE+ENELILASVL+G FDAV +LLR NV+K+EAL+NLDLI L  D
Sbjct: 65  VVYKFVQDLHFFVTGGEEENELILASVLEGLFDAVTLLLRSNVDKREALDNLDLIFLSFD 124

Query: 126 EIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLLK 179
           EIIDGGI+LETDANVIAGK   +S D  APLSEQTISQALATAREHL RSL+K
Sbjct: 125 EIIDGGIVLETDANVIAGKAGINSTDPNAPLSEQTISQALATAREHLTRSLMK 177

[Close]

BLAST of MS013505 vs. TAIR 10
Match: AT4G08520.1 (SNARE-like superfamily protein )

HSP 1 Score: 272.3 bits (695), Expect = 2.7e-73
Identity = 137/175 (78.29%), Postives = 155/175 (88.57%), Query Frame = 0


Query: 3   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 62
           +SCP +KNILLLDSEGKRVAVKYYSDDW TN++K AFEK VF+KT KTNARTEAEI + E
Sbjct: 6   DSCPLVKNILLLDSEGKRVAVKYYSDDWATNASKLAFEKYVFSKTSKTNARTEAEITLLE 65

Query: 63  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122
           +NIVVYKF QDLHFFVTGGE+ENEL+L+SVLQGFFDAV +LLR NVEK EALENLDLI L
Sbjct: 66  SNIVVYKFAQDLHFFVTGGENENELVLSSVLQGFFDAVALLLRNNVEKMEALENLDLIFL 125

Query: 123 CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLL 178
           CLDE++D G++LETDANVIAGKVA  S +    LSEQT++QALATAREHLARSLL
Sbjct: 126 CLDEMVDQGMVLETDANVIAGKVAMQSAEASGSLSEQTLTQALATAREHLARSLL 180

[Close]

BLAST of MS013505 vs. TAIR 10
Match: AT3G09800.1 (SNARE-like superfamily protein )

HSP 1 Score: 271.9 bits (694), Expect = 3.5e-73
Identity = 136/175 (77.71%), Postives = 154/175 (88.00%), Query Frame = 0


Query: 3   ESCPSIKNILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMFE 62
           +SCP +K ILLLDSEGKRVAVKYYSDDWPTN+AK +FEK VF+KT KTNARTEAEI + +
Sbjct: 4   DSCPLVKKILLLDSEGKRVAVKYYSDDWPTNAAKLSFEKYVFSKTSKTNARTEAEITLLD 63

Query: 63  NNIVVYKFVQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILL 122
           +NI+VYKF QDLHFFVTGGE+ENELILASVLQGFFDAV +LLR NVEK EALENLDLI L
Sbjct: 64  SNIIVYKFAQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFL 123

Query: 123 CLDEIIDGGIILETDANVIAGKVASHSIDTGAPLSEQTISQALATAREHLARSLL 178
           CLDE++D G++LETD NVIAGKVA  S +    LSEQT++QALATAREHLARSLL
Sbjct: 124 CLDEMVDQGVVLETDPNVIAGKVAMQSTEASGSLSEQTLTQALATAREHLARSLL 178

The following BLAST results are available for this feature:

BLAST of MS013505 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139792.1	2.5e-89	100.00	coatomer subunit zeta-1-like [Momordica charantia]	[more]
XP_023542942.1	2.5e-89	98.31	coatomer subunit zeta-2-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022954696.1	7.4e-89	97.75	coatomer subunit zeta-2-like isoform X1 [Cucurbita moschata] >XP_022994905.1 coa...	[more]
XP_023542943.1	1.3e-88	98.86	coatomer subunit zeta-1-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_038895635.1	2.1e-88	97.75	coatomer subunit zeta-2-like isoform X1 [Benincasa hispida]	[more]

BLAST of MS013505 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6Z844	3.7e-75	79.66	Coatomer subunit zeta-2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ2 PE=2 S...	[more]
Q940S5	1.8e-74	82.08	Coatomer subunit zeta-1 OS=Arabidopsis thaliana OX=3702 GN=At1g60970 PE=2 SV=1	[more]
Q84LG4	1.0e-72	78.29	Coatomer subunit zeta-2 OS=Arabidopsis thaliana OX=3702 GN=At3g09800 PE=2 SV=1	[more]
Q8H1F4	3.8e-72	78.29	Coatomer subunit zeta-3 OS=Arabidopsis thaliana OX=3702 GN=At4g08520 PE=2 SV=1	[more]
Q9MAX5	2.3e-69	76.00	Coatomer subunit zeta-1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ1 PE=2 S...	[more]

BLAST of MS013505 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CEY0	1.2e-89	100.00	Coatomer subunit zeta OS=Momordica charantia OX=3673 GN=LOC111010622 PE=3 SV=1	[more]
A0A6J1K2M3	3.6e-89	97.75	Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111490490 PE=3 SV=1	[more]
A0A6J1GRL4	3.6e-89	97.75	Coatomer subunit zeta OS=Cucurbita moschata OX=3662 GN=LOC111456877 PE=3 SV=1	[more]
A0A6J1K0K6	1.8e-88	98.30	Coatomer subunit zeta OS=Cucurbita maxima OX=3661 GN=LOC111490490 PE=3 SV=1	[more]
A0A6J1EIB5	1.8e-88	97.75	Coatomer subunit zeta OS=Cucurbita moschata OX=3662 GN=LOC111434347 PE=3 SV=1	[more]

BLAST of MS013505 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60970.1	1.3e-75	82.08	SNARE-like superfamily protein	[more]
AT4G08520.1	2.7e-73	78.29	SNARE-like superfamily protein	[more]
AT3G09800.1	3.5e-73	77.71	SNARE-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.450.60		coord: 1..148 e-value: 8.1E-44 score: 151.1
None	No IPR available	PANTHER	PTHR11043:SF30	COATOMER SUBUNIT ZETA-2-LIKE	coord: 3..178
None	No IPR available	CDD	cd14829	Zeta-COP	coord: 9..144 e-value: 5.1855E-74 score: 216.643
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 8..146 e-value: 5.5E-23 score: 81.5
IPR039652	Coatomer subunit zeta	PANTHER	PTHR11043	ZETA-COAT PROTEIN	coord: 3..178
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 8..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013505.1	MS013505.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component	GO:0030126	COPI vesicle coat