MS013477 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAATCAAATAATCCACCTTATAAATTTGCAAAGGGAGCAGCCCTCTTCTCTTCCCTAGCCTCCCTAATTCTTCTCTCCATTATCTTCACCTTCAAAAACCTCTCTTTTTCATCTCATCTCTTCAACAGCACCAACTTCTGGTTCTTCATTTCCAACGCCCTCATAATTCTCATCATAGCCGCTGATTATAATCGCATTTTCTCTCCCACCCAAAACAAAAGACTCGATTTTTATGAAGATTACGTATCCTCCAATCAAAACCAAACTCAGATACTTCAAAGTTCTTCACTGGCAGTAATAGTTGATGAAGAGAGAGAAACCCCAGAAGAGAAATTGCAAATCGTGGTTGGAAGACGCGATTTTGGGTCTTGCCGGCGAAGCAAGTCGGAGAAACCCAAGAGAAAAACCATGGAGAGGAGGTCGGAAAGTGTAAAATACGAAGCAAAGGGAGAAGGAAATGAGTTCTCAAAGATGACAGATGAAGAATTGAATAGAAGGGTGGAGGAATTTATTCAAAGAATTAATAGACAAATGAGACTTCAA AAATCAAATAATCCACCTTATAAATTTGCAAAGGGAGCAGCCCTCTTCTCTTCCCTAGCCTCCCTAATTCTTCTCTCCATTATCTTCACCTTCAAAAACCTCTCTTTTTCATCTCATCTCTTCAACAGCACCAACTTCTGGTTCTTCATTTCCAACGCCCTCATAATTCTCATCATAGCCGCTGATTATAATCGCATTTTCTCTCCCACCCAAAACAAAAGACTCGATTTTTATGAAGATTACGTATCCTCCAATCAAAACCAAACTCAGATACTTCAAAGTTCTTCACTGGCAGTAATAGTTGATGAAGAGAGAGAAACCCCAGAAGAGAAATTGCAAATCGTGGTTGGAAGACGCGATTTTGGGTCTTGCCGGCGAAGCAAGTCGGAGAAACCCAAGAGAAAAACCATGGAGAGGAGGTCGGAAAGTGTAAAATACGAAGCAAAGGGAGAAGGAAATGAGTTCTCAAAGATGACAGATGAAGAATTGAATAGAAGGGTGGAGGAATTTATTCAAAGAATTAATAGACAAATGAGACTTCAA AAATCAAATAATCCACCTTATAAATTTGCAAAGGGAGCAGCCCTCTTCTCTTCCCTAGCCTCCCTAATTCTTCTCTCCATTATCTTCACCTTCAAAAACCTCTCTTTTTCATCTCATCTCTTCAACAGCACCAACTTCTGGTTCTTCATTTCCAACGCCCTCATAATTCTCATCATAGCCGCTGATTATAATCGCATTTTCTCTCCCACCCAAAACAAAAGACTCGATTTTTATGAAGATTACGTATCCTCCAATCAAAACCAAACTCAGATACTTCAAAGTTCTTCACTGGCAGTAATAGTTGATGAAGAGAGAGAAACCCCAGAAGAGAAATTGCAAATCGTGGTTGGAAGACGCGATTTTGGGTCTTGCCGGCGAAGCAAGTCGGAGAAACCCAAGAGAAAAACCATGGAGAGGAGGTCGGAAAGTGTAAAATACGAAGCAAAGGGAGAAGGAAATGAGTTCTCAAAGATGACAGATGAAGAATTGAATAGAAGGGTGGAGGAATTTATTCAAAGAATTAATAGACAAATGAGACTTCAA KSNNPPYKFAKGAALFSSLASLILLSIIFTFKNLSFSSHLFNSTNFWFFISNALIILIIAADYNRIFSPTQNKRLDFYEDYVSSNQNQTQILQSSSLAVIVDEERETPEEKLQIVVGRRDFGSCRRSKSEKPKRKTMERRSESVKYEAKGEGNEFSKMTDEELNRRVEEFIQRINRQMRLQ Homology
BLAST of MS013477 vs. NCBI nr
Match: XP_038877172.1 (uncharacterized protein LOC120069472 [Benincasa hispida]) HSP 1 Score: 142.9 bits (359), Expect = 2.7e-30 Identity = 106/187 (56.68%), Postives = 117/187 (62.57%), Query Frame = 0
BLAST of MS013477 vs. NCBI nr
Match: XP_022927149.1 (uncharacterized protein LOC111434084 [Cucurbita moschata]) HSP 1 Score: 135.6 bits (340), Expect = 4.3e-28 Identity = 105/186 (56.45%), Postives = 115/186 (61.83%), Query Frame = 0
BLAST of MS013477 vs. NCBI nr
Match: XP_023001467.1 (uncharacterized protein LOC111495593 [Cucurbita maxima]) HSP 1 Score: 132.1 bits (331), Expect = 4.8e-27 Identity = 103/186 (55.38%), Postives = 115/186 (61.83%), Query Frame = 0
BLAST of MS013477 vs. NCBI nr
Match: KAE8653186.1 (hypothetical protein Csa_020019 [Cucumis sativus]) HSP 1 Score: 131.7 bits (330), Expect = 6.3e-27 Identity = 109/195 (55.90%), Postives = 124/195 (63.59%), Query Frame = 0
BLAST of MS013477 vs. NCBI nr
Match: XP_023520225.1 (uncharacterized protein LOC111783530 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 127.5 bits (319), Expect = 1.2e-25 Identity = 101/186 (54.30%), Postives = 112/186 (60.22%), Query Frame = 0
BLAST of MS013477 vs. ExPASy TrEMBL
Match: A0A6J1EH73 (uncharacterized protein LOC111434084 OS=Cucurbita moschata OX=3662 GN=LOC111434084 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 2.1e-28 Identity = 105/186 (56.45%), Postives = 115/186 (61.83%), Query Frame = 0
BLAST of MS013477 vs. ExPASy TrEMBL
Match: A0A6J1KGM0 (uncharacterized protein LOC111495593 OS=Cucurbita maxima OX=3661 GN=LOC111495593 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 2.3e-27 Identity = 103/186 (55.38%), Postives = 115/186 (61.83%), Query Frame = 0
BLAST of MS013477 vs. ExPASy TrEMBL
Match: A0A0A0M033 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G435810 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 1.2e-20 Identity = 88/163 (53.99%), Postives = 101/163 (61.96%), Query Frame = 0
BLAST of MS013477 vs. ExPASy TrEMBL
Match: A0A7J7CW61 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW13G01217 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.8e-16 Identity = 86/205 (41.95%), Postives = 116/205 (56.59%), Query Frame = 0
BLAST of MS013477 vs. ExPASy TrEMBL
Match: A0A2N9GT34 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30393 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 4.1e-16 Identity = 86/195 (44.10%), Postives = 117/195 (60.00%), Query Frame = 0
BLAST of MS013477 vs. TAIR 10
Match: AT1G30190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34610.1); Has 56 Blast hits to 56 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 1.4e-05 Identity = 78/266 (29.32%), Postives = 113/266 (42.48%), Query Frame = 0
BLAST of MS013477 vs. TAIR 10
Match: AT2G34610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30190.1); Has 342 Blast hits to 279 proteins in 74 species: Archae - 0; Bacteria - 7; Metazoa - 76; Fungi - 18; Plants - 51; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 1.4e-05 Identity = 80/279 (28.67%), Postives = 105/279 (37.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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