MS013439 (gene) Bitter gourd (TR) v1

Overview
NameMS013439
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionX8 domain-containing protein
Locationscaffold402: 1538950 .. 1539791 (-)
RNA-Seq ExpressionMS013439
SyntenyMS013439
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAAGGCGGAGGCAGCAATGCCAGCGACGACATTGTCGCCACCAGAAGGGAACACGACGTTCCTTGATGGAACGTCGTGGTGCGTGGCTCGGGCCGGGGCGTCTCAGATCGATCTGCAGAACGCGTTGGACTGGGCGTGTGGATTGGGAAAGGCAGATTGTAGAGCCATTCAGAAGGGAGGGGCTTGTTATCAACCAGACACACTCTTGTCCCATGCATCTTATGCATTCAATAGCTTCTATCAGCAGAATGGCAACTCTGATATTGCTTGCAATTTTGGTGGCTCTGCTACTTTAACCAAAAAAAATCCAAGTAAAATCTCCCTCCCTCTCTCTTCATTGTCTTGCAATCCTTGGTTTCGAATTTAGTTTCAATTGAATCCCTGTACTTTTAAAATTTTCATCGTAGTCCTTGTAGTTTTGTTACATATCTCAAAACAACATTTGTACTTTATCTTGTCGTCTTATTAACTCATTTTCGTCGCGTCTAAAGAAAATGTAAATATTATAGGGACTAAATTGAAACCAAGTTTAAATTTTAAGACATTAAAATGTCACTTTTAACCACTAAATCGCACCTCTCTAATTACATTTTCTTAATTGGTACAGGTTATGGAAAATGTGACTATTCAGCATCCAGGTATTTTCAGTTGACATAATAAAAATTAAAATTTGTTTAAAATAATAATGTTGAAGGGTGGTTATTAATTAGTGTTTTTTGGTGGAAAATGGGACTCAGTTCAGTGAACTCAGCAACTTCAAAGTTGAAGAACAATGGAAGCCATGTGTGCCTGAGGTTGGTTGCTGGAATTTTGATGGTGTTGAATTTATATTTAGGAAGC

mRNA sequence

GAGAAGGCGGAGGCAGCAATGCCAGCGACGACATTGTCGCCACCAGAAGGGAACACGACGTTCCTTGATGGAACGTCGTGGTGCGTGGCTCGGGCCGGGGCGTCTCAGATCGATCTGCAGAACGCGTTGGACTGGGCGTGTGGATTGGGAAAGGCAGATTGTAGAGCCATTCAGAAGGGAGGGGCTTGTTATCAACCAGACACACTCTTGTCCCATGCATCTTATGCATTCAATAGCTTCTATCAGCAGAATGGCAACTCTGATATTGCTTGCAATTTTGGTGGCTCTGCTACTTTAACCAAAAAAAATCCAAGTAAAATCTCCCTCCCTCTCTCTTCATTTTCAGTGAACTCAGCAACTTCAAAGTTGAAGAACAATGGAAGCCATGTGTGCCTGAGGTTGGTTGCTGGAATTTTGATGGTGTTGAATTTATATTTAGGAAGC

Coding sequence (CDS)

GAGAAGGCGGAGGCAGCAATGCCAGCGACGACATTGTCGCCACCAGAAGGGAACACGACGTTCCTTGATGGAACGTCGTGGTGCGTGGCTCGGGCCGGGGCGTCTCAGATCGATCTGCAGAACGCGTTGGACTGGGCGTGTGGATTGGGAAAGGCAGATTGTAGAGCCATTCAGAAGGGAGGGGCTTGTTATCAACCAGACACACTCTTGTCCCATGCATCTTATGCATTCAATAGCTTCTATCAGCAGAATGGCAACTCTGATATTGCTTGCAATTTTGGTGGCTCTGCTACTTTAACCAAAAAAAATCCAAGTAAAATCTCCCTCCCTCTCTCTTCATTTTCAGTGAACTCAGCAACTTCAAAGTTGAAGAACAATGGAAGCCATGTGTGCCTGAGGTTGGTTGCTGGAATTTTGATGGTGTTGAATTTATATTTAGGAAGC

Protein sequence

EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPSKISLPLSSFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYLGS
Homology
BLAST of MS013439 vs. NCBI nr
Match: XP_022140209.1 (major pollen allergen Ole e 10 [Momordica charantia])

HSP 1 Score: 273.9 bits (699), Expect = 8.3e-70
Identity = 140/149 (93.96%), Postives = 140/149 (93.96%), Query Frame = 0

Query: 1   EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKG 60
           EKAEAAMPATTLSPPEGN TFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKG
Sbjct: 31  EKAEAAMPATTLSPPEGNATFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKG 90

Query: 61  GACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPSKISLPLS-SFSVNSA 120
           GACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS      S S SVNSA
Sbjct: 91  GACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPSYGKCDYSASSSVNSA 150

Query: 121 TSKLKNNGSHVCLRLVAGILMVLNLYLGS 149
           TSKLKNNGSHVCLRLVAGILMVLNLYLGS
Sbjct: 151 TSKLKNNGSHVCLRLVAGILMVLNLYLGS 179

BLAST of MS013439 vs. NCBI nr
Match: XP_022994908.1 (major pollen allergen Ole e 10-like [Cucurbita maxima])

HSP 1 Score: 233.8 bits (595), Expect = 9.6e-58
Identity = 118/149 (79.19%), Postives = 126/149 (84.56%), Query Frame = 0

Query: 1   EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKG 60
           EKAEA+MP TT SPPEGNTTFLDGTSWCVA+ G SQIDLQNALDWACGLGKADCRAIQKG
Sbjct: 30  EKAEASMPMTTWSPPEGNTTFLDGTSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKG 89

Query: 61  GACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPSKISLPLS-SFSVNSA 120
           G CYQPDTL SHASYAFNS+YQQNGNSDIACNFGGSATLTK++PS      S S S +SA
Sbjct: 90  GRCYQPDTLFSHASYAFNSYYQQNGNSDIACNFGGSATLTKRDPSYGKCDYSASRSASSA 149

Query: 121 TSKLKNNGSHVCLRLVAGILMVLNLYLGS 149
            SK K NGS  CL+LV GI MV+NLY GS
Sbjct: 150 PSKWKKNGSRGCLQLVGGIWMVMNLYFGS 178

BLAST of MS013439 vs. NCBI nr
Match: KAG6573386.1 (Glucan endo-1,3-beta-glucosidase 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 230.3 bits (586), Expect = 1.1e-56
Identity = 116/147 (78.91%), Postives = 125/147 (85.03%), Query Frame = 0

Query: 1   EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKG 60
           EKAEA+MP TT SPPEGNTTFLDGTSWCVA+ G SQIDLQNALDWACGLGKADCRAIQKG
Sbjct: 8   EKAEASMPMTTWSPPEGNTTFLDGTSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKG 67

Query: 61  GACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPSKISLPLS-SFSVNSA 120
           G CYQPDTL SHASYAFNS+YQQNGNSDIACNFGGSATLTK++PS      S S S +SA
Sbjct: 68  GRCYQPDTLFSHASYAFNSYYQQNGNSDIACNFGGSATLTKRDPSYGKCDYSASRSTSSA 127

Query: 121 TSKLKNNGSHVCLRLVAGILMVLNLYL 147
            SK K NG H  L+L+ GILMV+NLYL
Sbjct: 128 RSKWKKNGRHGWLKLIGGILMVMNLYL 154

BLAST of MS013439 vs. NCBI nr
Match: XP_038895270.1 (major pollen allergen Ole e 10 [Benincasa hispida])

HSP 1 Score: 229.6 bits (584), Expect = 1.8e-56
Identity = 115/149 (77.18%), Postives = 126/149 (84.56%), Query Frame = 0

Query: 3   AEAAMPATT--LSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKG 62
           AEA M  TT  ++PPEGNTTFLDGTSWCVA+AGASQIDLQNALDWACGLGKADCRAIQKG
Sbjct: 25  AEAGMAVTTAAMTPPEGNTTFLDGTSWCVAKAGASQIDLQNALDWACGLGKADCRAIQKG 84

Query: 63  GACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPSKISLPLS-SFSVNSA 122
           G CYQPDTLLSHASYAFNS+YQQNGNSDIACNFGG ATLTK NPS      S S S +SA
Sbjct: 85  GPCYQPDTLLSHASYAFNSYYQQNGNSDIACNFGGCATLTKNNPSYGKCDYSASSSTSSA 144

Query: 123 TSKLKNNGSHVCLRLVAGILMVLNLYLGS 149
            SK KN+ SH+CL+L+ G+ M+LNLY GS
Sbjct: 145 PSKFKNSPSHICLKLLCGVFMLLNLYFGS 173

BLAST of MS013439 vs. NCBI nr
Match: XP_022955069.1 (glucan endo-1,3-beta-glucosidase 13-like [Cucurbita moschata])

HSP 1 Score: 229.2 bits (583), Expect = 2.4e-56
Identity = 116/147 (78.91%), Postives = 124/147 (84.35%), Query Frame = 0

Query: 1   EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKG 60
           EKAEA+MP TT SPPEGNTTFLDGTSWCVA+ G SQIDLQNALDWACGLGKADCRAIQKG
Sbjct: 30  EKAEASMPMTTWSPPEGNTTFLDGTSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKG 89

Query: 61  GACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPSKISLPLS-SFSVNSA 120
           G CYQPDTL SHASYAFNS+YQQNGNSDIACNFGGSATLTK++PS      S S S +SA
Sbjct: 90  GRCYQPDTLFSHASYAFNSYYQQNGNSDIACNFGGSATLTKRDPSYGKCDYSASRSTSSA 149

Query: 121 TSKLKNNGSHVCLRLVAGILMVLNLYL 147
            SK K NG H  L+LV GI MV+NLYL
Sbjct: 150 RSKWKKNGRHGWLKLVGGIFMVMNLYL 176

BLAST of MS013439 vs. ExPASy Swiss-Prot
Match: Q9FJU9 (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana OX=3702 GN=At5g56590 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.0e-22
Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 0

Query: 13  SPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSH 72
           S   G  +     SWC+A + AS+ DL+ ALDWACG G  DC AIQ    C+QPDTL+SH
Sbjct: 355 SNSSGTNSSGSSNSWCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSH 414

Query: 73  ASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS 106
           AS+ FNS++QQN  +D+AC+FGG+     K+PS
Sbjct: 415 ASFVFNSYFQQNRATDVACSFGGAGVKVNKDPS 447

BLAST of MS013439 vs. ExPASy Swiss-Prot
Match: Q8VYE5 (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.7e-21
Identity = 51/106 (48.11%), Postives = 68/106 (64.15%), Query Frame = 0

Query: 8   PATTLSP-PEGNTTFLDG-------TSWCVARAGASQIDLQNALDWACGLGKADCRAIQK 67
           P+ + SP   GN+T   G         WC+A + AS  +LQ ALDWACG G  DC A+Q 
Sbjct: 364 PSPSSSPIINGNSTVTIGGGGGGGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQP 423

Query: 68  GGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS 106
              C++PDT+LSHASYAFN++YQQ+G S I C+F G++    K+PS
Sbjct: 424 DQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVDKDPS 469

BLAST of MS013439 vs. ExPASy Swiss-Prot
Match: Q9C7U5 (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 PE=2 SV=2)

HSP 1 Score: 97.1 bits (240), Expect = 1.8e-19
Identity = 42/80 (52.50%), Postives = 58/80 (72.50%), Query Frame = 0

Query: 26  SWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNG 85
           ++C AR GA    LQ ALDWACG GK DC  I++G  CY+PD +++HA+YAF+++Y Q G
Sbjct: 367 TYCTAREGADTKMLQAALDWACGPGKIDCSPIKQGETCYEPDNVVAHANYAFDTYYHQTG 426

Query: 86  NSDIACNFGGSATLTKKNPS 106
           N+  ACNF G A++T  +PS
Sbjct: 427 NNPDACNFNGVASITTTDPS 446

BLAST of MS013439 vs. ExPASy Swiss-Prot
Match: P52409 (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum OX=4565 GN=GLC1 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.1e-19
Identity = 46/102 (45.10%), Postives = 66/102 (64.71%), Query Frame = 0

Query: 5   AAMPATTLSP-PEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGAC 64
           A  P+   SP P        G  WCVA+ GA+  DLQN +++ACG    DC+ IQ GGAC
Sbjct: 354 APTPSPNPSPNPSPKPAPSGGGKWCVAKDGANGTDLQNNINYACGF--VDCKPIQSGGAC 413

Query: 65  YQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS 106
           + P++L +HASY  N++YQ NG++D+AC+F G+  +T  +PS
Sbjct: 414 FSPNSLQAHASYVMNAYYQANGHTDLACDFKGTGIVTSSDPS 453

BLAST of MS013439 vs. ExPASy Swiss-Prot
Match: Q9M069 (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-17
Identity = 43/100 (43.00%), Postives = 65/100 (65.00%), Query Frame = 0

Query: 6   AMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQ 65
           A  +++   P G  T    + WCV + GA+  +LQ +LDWACG G  DC AIQ GGAC++
Sbjct: 346 AKSSSSSQTPSGKVT---SSGWCVPKKGATNEELQASLDWACGHG-IDCGAIQPGGACFE 405

Query: 66  PDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS 106
           P+ ++SHA+YA N ++Q++      C+F  +AT+T +NPS
Sbjct: 406 PNNVVSHAAYAMNMYFQKSPKQPTDCDFSKTATVTSQNPS 441

BLAST of MS013439 vs. ExPASy TrEMBL
Match: A0A6J1CF38 (major pollen allergen Ole e 10 OS=Momordica charantia OX=3673 GN=LOC111010934 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.0e-70
Identity = 140/149 (93.96%), Postives = 140/149 (93.96%), Query Frame = 0

Query: 1   EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKG 60
           EKAEAAMPATTLSPPEGN TFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKG
Sbjct: 31  EKAEAAMPATTLSPPEGNATFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKG 90

Query: 61  GACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPSKISLPLS-SFSVNSA 120
           GACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS      S S SVNSA
Sbjct: 91  GACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPSYGKCDYSASSSVNSA 150

Query: 121 TSKLKNNGSHVCLRLVAGILMVLNLYLGS 149
           TSKLKNNGSHVCLRLVAGILMVLNLYLGS
Sbjct: 151 TSKLKNNGSHVCLRLVAGILMVLNLYLGS 179

BLAST of MS013439 vs. ExPASy TrEMBL
Match: A0A6J1K6E1 (major pollen allergen Ole e 10-like OS=Cucurbita maxima OX=3661 GN=LOC111490492 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.6e-58
Identity = 118/149 (79.19%), Postives = 126/149 (84.56%), Query Frame = 0

Query: 1   EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKG 60
           EKAEA+MP TT SPPEGNTTFLDGTSWCVA+ G SQIDLQNALDWACGLGKADCRAIQKG
Sbjct: 30  EKAEASMPMTTWSPPEGNTTFLDGTSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKG 89

Query: 61  GACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPSKISLPLS-SFSVNSA 120
           G CYQPDTL SHASYAFNS+YQQNGNSDIACNFGGSATLTK++PS      S S S +SA
Sbjct: 90  GRCYQPDTLFSHASYAFNSYYQQNGNSDIACNFGGSATLTKRDPSYGKCDYSASRSASSA 149

Query: 121 TSKLKNNGSHVCLRLVAGILMVLNLYLGS 149
            SK K NGS  CL+LV GI MV+NLY GS
Sbjct: 150 PSKWKKNGSRGCLQLVGGIWMVMNLYFGS 178

BLAST of MS013439 vs. ExPASy TrEMBL
Match: A0A6J1GUW0 (glucan endo-1,3-beta-glucosidase 13-like OS=Cucurbita moschata OX=3662 GN=LOC111457145 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.1e-56
Identity = 116/147 (78.91%), Postives = 124/147 (84.35%), Query Frame = 0

Query: 1   EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKG 60
           EKAEA+MP TT SPPEGNTTFLDGTSWCVA+ G SQIDLQNALDWACGLGKADCRAIQKG
Sbjct: 30  EKAEASMPMTTWSPPEGNTTFLDGTSWCVAKPGVSQIDLQNALDWACGLGKADCRAIQKG 89

Query: 61  GACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPSKISLPLS-SFSVNSA 120
           G CYQPDTL SHASYAFNS+YQQNGNSDIACNFGGSATLTK++PS      S S S +SA
Sbjct: 90  GRCYQPDTLFSHASYAFNSYYQQNGNSDIACNFGGSATLTKRDPSYGKCDYSASRSTSSA 149

Query: 121 TSKLKNNGSHVCLRLVAGILMVLNLYL 147
            SK K NG H  L+LV GI MV+NLYL
Sbjct: 150 RSKWKKNGRHGWLKLVGGIFMVMNLYL 176

BLAST of MS013439 vs. ExPASy TrEMBL
Match: A0A1S3BB84 (glucan endo-1,3-beta-glucosidase 13 OS=Cucumis melo OX=3656 GN=LOC103488047 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.6e-53
Identity = 108/147 (73.47%), Postives = 123/147 (83.67%), Query Frame = 0

Query: 3   AEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGA 62
           AEA MP    +P EGNTTF+DGT+WCVA+ G SQIDLQNALDWACG+GKADCRAIQKGG 
Sbjct: 25  AEAGMPVMA-APVEGNTTFIDGTTWCVAKPGVSQIDLQNALDWACGMGKADCRAIQKGGR 84

Query: 63  CYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPSKISLPLS-SFSVNSATS 122
           CY+PDTLLSHASYAFNS+YQQNGNSDIACNFGG ATLTKK+PS      S S S NSA S
Sbjct: 85  CYEPDTLLSHASYAFNSYYQQNGNSDIACNFGGCATLTKKDPSYGKCDYSASSSTNSAPS 144

Query: 123 KLKNNGSHVCLRLVAGILMVLNLYLGS 149
           K KN+ SH+CL+L++G+ +VLNLY GS
Sbjct: 145 KSKNSPSHICLKLLSGVFVVLNLYFGS 170

BLAST of MS013439 vs. ExPASy TrEMBL
Match: A0A6J1AK05 (glucan endo-1,3-beta-glucosidase 13 OS=Herrania umbratica OX=108875 GN=LOC110418496 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 2.2e-47
Identity = 91/105 (86.67%), Postives = 100/105 (95.24%), Query Frame = 0

Query: 1   EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKG 60
           EKAEAA+P TTLSPPEGNTTFLDGT+WCVA AG SQIDLQNALDWACGLG ADC+AIQ+G
Sbjct: 33  EKAEAAIPVTTLSPPEGNTTFLDGTTWCVALAGVSQIDLQNALDWACGLGMADCKAIQEG 92

Query: 61  GACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS 106
           G CY+PDTL+SHASYAFN++YQQNGNSDIACNFGG+ATLTKKNPS
Sbjct: 93  GQCYEPDTLVSHASYAFNNYYQQNGNSDIACNFGGTATLTKKNPS 137

BLAST of MS013439 vs. TAIR 10
Match: AT4G05430.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 146.0 bits (367), Expect = 2.4e-35
Identity = 68/113 (60.18%), Postives = 88/113 (77.88%), Query Frame = 0

Query: 11  TLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLL 70
           +L  P+GNTTFL+GT+WCVAR GA+Q +LQ ALDWACG+G+ DC  I++ G CY+PDT++
Sbjct: 7   SLVGPQGNTTFLEGTTWCVARPGATQAELQRALDWACGIGRVDCSVIERHGDCYEPDTIV 66

Query: 71  SHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS--KISLPLSSFSVNSATS 122
           SHAS+AFN++YQ NGN+ IAC FGG+AT TK NPS  K S   S   V++A S
Sbjct: 67  SHASFAFNAYYQTNGNNRIACYFGGTATFTKINPSYGKCSYDASKSEVSTARS 119

BLAST of MS013439 vs. TAIR 10
Match: AT1G29380.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 108.2 bits (269), Expect = 5.6e-24
Identity = 54/95 (56.84%), Postives = 69/95 (72.63%), Query Frame = 0

Query: 27  WCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGN 86
           WC+A+A AS   LQ ALD+ACG G ADC  IQ+G ACY+P+T+  HAS+AFNS+YQ++  
Sbjct: 148 WCIAKANASPTSLQVALDYACGYGGADCGQIQQGAACYEPNTIRDHASFAFNSYYQKHPG 207

Query: 87  SDIACNFGGSATLTKKNPSKISLPLSSFSVNSATS 122
           SD +CNFGG+A LT  +PSK S   SS S   +TS
Sbjct: 208 SD-SCNFGGAAQLTSTDPSKGSCHFSSSSGTVSTS 241

BLAST of MS013439 vs. TAIR 10
Match: AT5G56590.1 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 107.8 bits (268), Expect = 7.4e-24
Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 0

Query: 13  SPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSH 72
           S   G  +     SWC+A + AS+ DL+ ALDWACG G  DC AIQ    C+QPDTL+SH
Sbjct: 355 SNSSGTNSSGSSNSWCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSH 414

Query: 73  ASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS 106
           AS+ FNS++QQN  +D+AC+FGG+     K+PS
Sbjct: 415 ASFVFNSYFQQNRATDVACSFGGAGVKVNKDPS 447

BLAST of MS013439 vs. TAIR 10
Match: AT1G09460.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 106.7 bits (265), Expect = 1.6e-23
Identity = 53/100 (53.00%), Postives = 72/100 (72.00%), Query Frame = 0

Query: 7   MPATTLSPP-EGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQ 66
           +P   ++PP   N+  + G SWCVA+ GASQ+ LQ ALD+ACG+  ADC  +Q+GG CY 
Sbjct: 116 VPVPVVAPPVVSNSPSVSGQSWCVAKPGASQVSLQQALDYACGI--ADCSQLQQGGNCYS 175

Query: 67  PDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPS 106
           P +L SHAS+AFNS+YQ+N  S  +C+FGG+A+L   NPS
Sbjct: 176 PISLQSHASFAFNSYYQKN-PSPQSCDFGGAASLVNTNPS 212

BLAST of MS013439 vs. TAIR 10
Match: AT4G29360.2 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 103.6 bits (257), Expect = 1.4e-22
Identity = 57/125 (45.60%), Postives = 76/125 (60.80%), Query Frame = 0

Query: 8   PATTLSP-PEGNTTFLDG-------TSWCVARAGASQIDLQNALDWACGLGKADCRAIQK 67
           P+ + SP   GN+T   G         WC+A + AS  +LQ ALDWACG G  DC A+Q 
Sbjct: 364 PSPSSSPIINGNSTVTIGGGGGGGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQP 423

Query: 68  GGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPSKISLPLSSFSVNSA 125
              C++PDT+LSHASYAFN++YQQ+G S I C+F G++    K+PSK  L   +F   S 
Sbjct: 424 DQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVDKDPSKY-LYTYTFQNTSI 483

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022140209.18.3e-7093.96major pollen allergen Ole e 10 [Momordica charantia][more]
XP_022994908.19.6e-5879.19major pollen allergen Ole e 10-like [Cucurbita maxima][more]
KAG6573386.11.1e-5678.91Glucan endo-1,3-beta-glucosidase 13, partial [Cucurbita argyrosperma subsp. soro... [more]
XP_038895270.11.8e-5677.18major pollen allergen Ole e 10 [Benincasa hispida][more]
XP_022955069.12.4e-5678.91glucan endo-1,3-beta-glucosidase 13-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q9FJU91.0e-2251.61Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana OX=3702 GN=At5g56590... [more]
Q8VYE55.7e-2148.11Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360... [more]
Q9C7U51.8e-1952.50Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 ... [more]
P524093.1e-1945.10Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum OX=4565 GN=GLC1 PE=2 SV=1[more]
Q9M0691.3e-1743.00Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 ... [more]
Match NameE-valueIdentityDescription
A0A6J1CF384.0e-7093.96major pollen allergen Ole e 10 OS=Momordica charantia OX=3673 GN=LOC111010934 PE... [more]
A0A6J1K6E14.6e-5879.19major pollen allergen Ole e 10-like OS=Cucurbita maxima OX=3661 GN=LOC111490492 ... [more]
A0A6J1GUW01.1e-5678.91glucan endo-1,3-beta-glucosidase 13-like OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A1S3BB842.6e-5373.47glucan endo-1,3-beta-glucosidase 13 OS=Cucumis melo OX=3656 GN=LOC103488047 PE=4... [more]
A0A6J1AK052.2e-4786.67glucan endo-1,3-beta-glucosidase 13 OS=Herrania umbratica OX=108875 GN=LOC110418... [more]
Match NameE-valueIdentityDescription
AT4G05430.12.4e-3560.18Carbohydrate-binding X8 domain superfamily protein [more]
AT1G29380.15.6e-2456.84Carbohydrate-binding X8 domain superfamily protein [more]
AT5G56590.17.4e-2451.61O-Glycosyl hydrolases family 17 protein [more]
AT1G09460.11.6e-2353.00Carbohydrate-binding X8 domain superfamily protein [more]
AT4G29360.21.4e-2245.60O-Glycosyl hydrolases family 17 protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012946X8 domainSMARTSM00768X8_clscoord: 26..133
e-value: 1.3E-42
score: 157.5
IPR012946X8 domainPFAMPF07983X8coord: 27..98
e-value: 3.9E-22
score: 78.7
NoneNo IPR availableGENE3D1.20.58.1040coord: 20..129
e-value: 1.2E-13
score: 53.2
NoneNo IPR availablePANTHERPTHR31044:SF36CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEINcoord: 10..106
IPR044788Carbohydrate-binding X8 domain-containing protein, plantPANTHERPTHR31044BETA-1,3 GLUCANASEcoord: 10..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS013439.1MS013439.1mRNA