MS013439 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAGAAGGCGGAGGCAGCAATGCCAGCGACGACATTGTCGCCACCAGAAGGGAACACGACGTTCCTTGATGGAACGTCGTGGTGCGTGGCTCGGGCCGGGGCGTCTCAGATCGATCTGCAGAACGCGTTGGACTGGGCGTGTGGATTGGGAAAGGCAGATTGTAGAGCCATTCAGAAGGGAGGGGCTTGTTATCAACCAGACACACTCTTGTCCCATGCATCTTATGCATTCAATAGCTTCTATCAGCAGAATGGCAACTCTGATATTGCTTGCAATTTTGGTGGCTCTGCTACTTTAACCAAAAAAAATCCAAGTAAAATCTCCCTCCCTCTCTCTTCATTGTCTTGCAATCCTTGGTTTCGAATTTAGTTTCAATTGAATCCCTGTACTTTTAAAATTTTCATCGTAGTCCTTGTAGTTTTGTTACATATCTCAAAACAACATTTGTACTTTATCTTGTCGTCTTATTAACTCATTTTCGTCGCGTCTAAAGAAAATGTAAATATTATAGGGACTAAATTGAAACCAAGTTTAAATTTTAAGACATTAAAATGTCACTTTTAACCACTAAATCGCACCTCTCTAATTACATTTTCTTAATTGGTACAGGTTATGGAAAATGTGACTATTCAGCATCCAGGTATTTTCAGTTGACATAATAAAAATTAAAATTTGTTTAAAATAATAATGTTGAAGGGTGGTTATTAATTAGTGTTTTTTGGTGGAAAATGGGACTCAGTTCAGTGAACTCAGCAACTTCAAAGTTGAAGAACAATGGAAGCCATGTGTGCCTGAGGTTGGTTGCTGGAATTTTGATGGTGTTGAATTTATATTTAGGAAGC GAGAAGGCGGAGGCAGCAATGCCAGCGACGACATTGTCGCCACCAGAAGGGAACACGACGTTCCTTGATGGAACGTCGTGGTGCGTGGCTCGGGCCGGGGCGTCTCAGATCGATCTGCAGAACGCGTTGGACTGGGCGTGTGGATTGGGAAAGGCAGATTGTAGAGCCATTCAGAAGGGAGGGGCTTGTTATCAACCAGACACACTCTTGTCCCATGCATCTTATGCATTCAATAGCTTCTATCAGCAGAATGGCAACTCTGATATTGCTTGCAATTTTGGTGGCTCTGCTACTTTAACCAAAAAAAATCCAAGTAAAATCTCCCTCCCTCTCTCTTCATTTTCAGTGAACTCAGCAACTTCAAAGTTGAAGAACAATGGAAGCCATGTGTGCCTGAGGTTGGTTGCTGGAATTTTGATGGTGTTGAATTTATATTTAGGAAGC GAGAAGGCGGAGGCAGCAATGCCAGCGACGACATTGTCGCCACCAGAAGGGAACACGACGTTCCTTGATGGAACGTCGTGGTGCGTGGCTCGGGCCGGGGCGTCTCAGATCGATCTGCAGAACGCGTTGGACTGGGCGTGTGGATTGGGAAAGGCAGATTGTAGAGCCATTCAGAAGGGAGGGGCTTGTTATCAACCAGACACACTCTTGTCCCATGCATCTTATGCATTCAATAGCTTCTATCAGCAGAATGGCAACTCTGATATTGCTTGCAATTTTGGTGGCTCTGCTACTTTAACCAAAAAAAATCCAAGTAAAATCTCCCTCCCTCTCTCTTCATTTTCAGTGAACTCAGCAACTTCAAAGTTGAAGAACAATGGAAGCCATGTGTGCCTGAGGTTGGTTGCTGGAATTTTGATGGTGTTGAATTTATATTTAGGAAGC EKAEAAMPATTLSPPEGNTTFLDGTSWCVARAGASQIDLQNALDWACGLGKADCRAIQKGGACYQPDTLLSHASYAFNSFYQQNGNSDIACNFGGSATLTKKNPSKISLPLSSFSVNSATSKLKNNGSHVCLRLVAGILMVLNLYLGS Homology
BLAST of MS013439 vs. NCBI nr
Match: XP_022140209.1 (major pollen allergen Ole e 10 [Momordica charantia]) HSP 1 Score: 273.9 bits (699), Expect = 8.3e-70 Identity = 140/149 (93.96%), Postives = 140/149 (93.96%), Query Frame = 0
BLAST of MS013439 vs. NCBI nr
Match: XP_022994908.1 (major pollen allergen Ole e 10-like [Cucurbita maxima]) HSP 1 Score: 233.8 bits (595), Expect = 9.6e-58 Identity = 118/149 (79.19%), Postives = 126/149 (84.56%), Query Frame = 0
BLAST of MS013439 vs. NCBI nr
Match: KAG6573386.1 (Glucan endo-1,3-beta-glucosidase 13, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 230.3 bits (586), Expect = 1.1e-56 Identity = 116/147 (78.91%), Postives = 125/147 (85.03%), Query Frame = 0
BLAST of MS013439 vs. NCBI nr
Match: XP_038895270.1 (major pollen allergen Ole e 10 [Benincasa hispida]) HSP 1 Score: 229.6 bits (584), Expect = 1.8e-56 Identity = 115/149 (77.18%), Postives = 126/149 (84.56%), Query Frame = 0
BLAST of MS013439 vs. NCBI nr
Match: XP_022955069.1 (glucan endo-1,3-beta-glucosidase 13-like [Cucurbita moschata]) HSP 1 Score: 229.2 bits (583), Expect = 2.4e-56 Identity = 116/147 (78.91%), Postives = 124/147 (84.35%), Query Frame = 0
BLAST of MS013439 vs. ExPASy Swiss-Prot
Match: Q9FJU9 (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana OX=3702 GN=At5g56590 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.0e-22 Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 0
BLAST of MS013439 vs. ExPASy Swiss-Prot
Match: Q8VYE5 (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360 PE=2 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 5.7e-21 Identity = 51/106 (48.11%), Postives = 68/106 (64.15%), Query Frame = 0
BLAST of MS013439 vs. ExPASy Swiss-Prot
Match: Q9C7U5 (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 PE=2 SV=2) HSP 1 Score: 97.1 bits (240), Expect = 1.8e-19 Identity = 42/80 (52.50%), Postives = 58/80 (72.50%), Query Frame = 0
BLAST of MS013439 vs. ExPASy Swiss-Prot
Match: P52409 (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum OX=4565 GN=GLC1 PE=2 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 3.1e-19 Identity = 46/102 (45.10%), Postives = 66/102 (64.71%), Query Frame = 0
BLAST of MS013439 vs. ExPASy Swiss-Prot
Match: Q9M069 (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 PE=1 SV=2) HSP 1 Score: 90.9 bits (224), Expect = 1.3e-17 Identity = 43/100 (43.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of MS013439 vs. ExPASy TrEMBL
Match: A0A6J1CF38 (major pollen allergen Ole e 10 OS=Momordica charantia OX=3673 GN=LOC111010934 PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 4.0e-70 Identity = 140/149 (93.96%), Postives = 140/149 (93.96%), Query Frame = 0
BLAST of MS013439 vs. ExPASy TrEMBL
Match: A0A6J1K6E1 (major pollen allergen Ole e 10-like OS=Cucurbita maxima OX=3661 GN=LOC111490492 PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 4.6e-58 Identity = 118/149 (79.19%), Postives = 126/149 (84.56%), Query Frame = 0
BLAST of MS013439 vs. ExPASy TrEMBL
Match: A0A6J1GUW0 (glucan endo-1,3-beta-glucosidase 13-like OS=Cucurbita moschata OX=3662 GN=LOC111457145 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 1.1e-56 Identity = 116/147 (78.91%), Postives = 124/147 (84.35%), Query Frame = 0
BLAST of MS013439 vs. ExPASy TrEMBL
Match: A0A1S3BB84 (glucan endo-1,3-beta-glucosidase 13 OS=Cucumis melo OX=3656 GN=LOC103488047 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.6e-53 Identity = 108/147 (73.47%), Postives = 123/147 (83.67%), Query Frame = 0
BLAST of MS013439 vs. ExPASy TrEMBL
Match: A0A6J1AK05 (glucan endo-1,3-beta-glucosidase 13 OS=Herrania umbratica OX=108875 GN=LOC110418496 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 2.2e-47 Identity = 91/105 (86.67%), Postives = 100/105 (95.24%), Query Frame = 0
BLAST of MS013439 vs. TAIR 10
Match: AT4G05430.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 146.0 bits (367), Expect = 2.4e-35 Identity = 68/113 (60.18%), Postives = 88/113 (77.88%), Query Frame = 0
BLAST of MS013439 vs. TAIR 10
Match: AT1G29380.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 108.2 bits (269), Expect = 5.6e-24 Identity = 54/95 (56.84%), Postives = 69/95 (72.63%), Query Frame = 0
BLAST of MS013439 vs. TAIR 10
Match: AT5G56590.1 (O-Glycosyl hydrolases family 17 protein ) HSP 1 Score: 107.8 bits (268), Expect = 7.4e-24 Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 0
BLAST of MS013439 vs. TAIR 10
Match: AT1G09460.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 106.7 bits (265), Expect = 1.6e-23 Identity = 53/100 (53.00%), Postives = 72/100 (72.00%), Query Frame = 0
BLAST of MS013439 vs. TAIR 10
Match: AT4G29360.2 (O-Glycosyl hydrolases family 17 protein ) HSP 1 Score: 103.6 bits (257), Expect = 1.4e-22 Identity = 57/125 (45.60%), Postives = 76/125 (60.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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