MS013277 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGGAATCAGCGAGAGGGGTCCTGAAGCAGATGCTGAGTGCGTTGAGCGCCATGGTGAAAAGGAAAAGCCGCGCCCTCAAAGCCCGTCTCATCATCCACTCCTTGCTTTCCAACACAAACTTCCTAGTCTCCTCCATCTCCCACAAGCTCCACCCTTTAACATCCACCCATCAACACGACCAACACCGCGAATTACAACCGCCCATGGAAGAGGCGGAGGCGGAGGCGGAGGTGGAGGTGGGAGCGGAGCAGTCCCCAGATGTGAGGCTGAGGCGGTCGCTGGTTGAGAGTGCATTTGATGAAGATCAGGGCGGAGGAAGCGGAGTAGGAGGGTCGGTGATCGAGATGGTGAAACATTCCAAGGAGGAGGCAGGGGAGGAGTTCTGTCTGGAACAGGACATAGACCATGTTGCAGACTTGTTCATTAGGAACTTCCATCGCCAGATGAGGATGCAGAAGCAGAACTCACTCACAAGGTGCTCATGGACAGAGCCCTTTGAA ATGAAGAAGGAATCAGCGAGAGGGGTCCTGAAGCAGATGCTGAGTGCGTTGAGCGCCATGGTGAAAAGGAAAAGCCGCGCCCTCAAAGCCCGTCTCATCATCCACTCCTTGCTTTCCAACACAAACTTCCTAGTCTCCTCCATCTCCCACAAGCTCCACCCTTTAACATCCACCCATCAACACGACCAACACCGCGAATTACAACCGCCCATGGAAGAGGCGGAGGCGGAGGCGGAGGTGGAGGTGGGAGCGGAGCAGTCCCCAGATGTGAGGCTGAGGCGGTCGCTGGTTGAGAGTGCATTTGATGAAGATCAGGGCGGAGGAAGCGGAGTAGGAGGGTCGGTGATCGAGATGGTGAAACATTCCAAGGAGGAGGCAGGGGAGGAGTTCTGTCTGGAACAGGACATAGACCATGTTGCAGACTTGTTCATTAGGAACTTCCATCGCCAGATGAGGATGCAGAAGCAGAACTCACTCACAAGGTGCTCATGGACAGAGCCCTTTGAA ATGAAGAAGGAATCAGCGAGAGGGGTCCTGAAGCAGATGCTGAGTGCGTTGAGCGCCATGGTGAAAAGGAAAAGCCGCGCCCTCAAAGCCCGTCTCATCATCCACTCCTTGCTTTCCAACACAAACTTCCTAGTCTCCTCCATCTCCCACAAGCTCCACCCTTTAACATCCACCCATCAACACGACCAACACCGCGAATTACAACCGCCCATGGAAGAGGCGGAGGCGGAGGCGGAGGTGGAGGTGGGAGCGGAGCAGTCCCCAGATGTGAGGCTGAGGCGGTCGCTGGTTGAGAGTGCATTTGATGAAGATCAGGGCGGAGGAAGCGGAGTAGGAGGGTCGGTGATCGAGATGGTGAAACATTCCAAGGAGGAGGCAGGGGAGGAGTTCTGTCTGGAACAGGACATAGACCATGTTGCAGACTTGTTCATTAGGAACTTCCATCGCCAGATGAGGATGCAGAAGCAGAACTCACTCACAAGGTGCTCATGGACAGAGCCCTTTGAA MKKESARGVLKQMLSALSAMVKRKSRALKARLIIHSLLSNTNFLVSSISHKLHPLTSTHQHDQHRELQPPMEEAEAEAEVEVGAEQSPDVRLRRSLVESAFDEDQGGGSGVGGSVIEMVKHSKEEAGEEFCLEQDIDHVADLFIRNFHRQMRMQKQNSLTRCSWTEPFE Homology
BLAST of MS013277 vs. NCBI nr
Match: XP_022148234.1 (uncharacterized protein LOC111016945 [Momordica charantia]) HSP 1 Score: 312.4 bits (799), Expect = 2.4e-81 Identity = 166/169 (98.22%), Postives = 167/169 (98.82%), Query Frame = 0
BLAST of MS013277 vs. NCBI nr
Match: XP_038904099.1 (uncharacterized protein LOC120090474 [Benincasa hispida]) HSP 1 Score: 148.3 bits (373), Expect = 6.0e-32 Identity = 95/163 (58.28%), Postives = 111/163 (68.10%), Query Frame = 0
BLAST of MS013277 vs. NCBI nr
Match: XP_008450196.1 (PREDICTED: uncharacterized protein LOC103491856 [Cucumis melo]) HSP 1 Score: 138.7 bits (348), Expect = 4.8e-29 Identity = 89/163 (54.60%), Postives = 115/163 (70.55%), Query Frame = 0
BLAST of MS013277 vs. NCBI nr
Match: XP_011651332.1 (uncharacterized protein LOC105434868 [Cucumis sativus] >KGN57686.1 hypothetical protein Csa_009867 [Cucumis sativus]) HSP 1 Score: 137.1 bits (344), Expect = 1.4e-28 Identity = 87/161 (54.04%), Postives = 114/161 (70.81%), Query Frame = 0
BLAST of MS013277 vs. NCBI nr
Match: XP_022928439.1 (uncharacterized protein LOC111435250 [Cucurbita moschata]) HSP 1 Score: 131.3 bits (329), Expect = 7.6e-27 Identity = 93/172 (54.07%), Postives = 109/172 (63.37%), Query Frame = 0
BLAST of MS013277 vs. ExPASy TrEMBL
Match: A0A6J1D3E1 (uncharacterized protein LOC111016945 OS=Momordica charantia OX=3673 GN=LOC111016945 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 1.2e-81 Identity = 166/169 (98.22%), Postives = 167/169 (98.82%), Query Frame = 0
BLAST of MS013277 vs. ExPASy TrEMBL
Match: A0A1S3BPP6 (uncharacterized protein LOC103491856 OS=Cucumis melo OX=3656 GN=LOC103491856 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 2.3e-29 Identity = 89/163 (54.60%), Postives = 115/163 (70.55%), Query Frame = 0
BLAST of MS013277 vs. ExPASy TrEMBL
Match: A0A0A0LCA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G252450 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 6.7e-29 Identity = 87/161 (54.04%), Postives = 114/161 (70.81%), Query Frame = 0
BLAST of MS013277 vs. ExPASy TrEMBL
Match: A0A6J1EKV0 (uncharacterized protein LOC111435250 OS=Cucurbita moschata OX=3662 GN=LOC111435250 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 3.7e-27 Identity = 93/172 (54.07%), Postives = 109/172 (63.37%), Query Frame = 0
BLAST of MS013277 vs. ExPASy TrEMBL
Match: A0A5A7TZT4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001820 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 6.3e-27 Identity = 83/154 (53.90%), Postives = 110/154 (71.43%), Query Frame = 0
BLAST of MS013277 vs. TAIR 10
Match: AT5G13880.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 85.5 bits (210), Expect = 4.5e-17 Identity = 73/191 (38.22%), Postives = 99/191 (51.83%), Query Frame = 0
BLAST of MS013277 vs. TAIR 10
Match: AT5G47920.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 77.8 bits (190), Expect = 9.3e-15 Identity = 67/180 (37.22%), Postives = 89/180 (49.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|