MS013243 (gene) Bitter gourd (TR) v1

Overview


Name	MS013243
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Tify domain-containing protein
Location	scaffold459: 1499919 .. 1500474 (-)
RNA-Seq Expression	MS013243
Synteny	MS013243

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCGCTCCTTACGACAACGCCGCCGGCCGGAAGCCGGAGAAGTCCAGTTTTGCCCAGACTTGTAATCTCTTGAGCCAGTACTTGAAGGAGAAGAGAAACCATGGAGTCACGAGGATTGAATTCGAACCAAAAGGTACTTTAATTTCTTTTTCTGGGTTTTCGAAACTTTTAATTAATTCATTAATTCGAAATATTTTCTGGATTTTGAAGGCGTGTTCTAATATGTGGTTGTGTTTCAGATGAGGTTTCGACGGTTGGTCGACCGGCGGCGATCAGGAACTTGCTGACGAACATGGAAAGCCCAGAAGAGAAGGGCTCCGGGCAGATGACCATTTTCTACGGCGGAAAAGTAGTGGTGTTCAATGATCTTCCGCCGGAGAGGGCGGAGGAGATCATGGCCATGGCCGGCAAGGGAACGGCAACGACCCTCTCTTCCAGATCCGCCGCCGCCGGAGAACAACTCCATCCGCAACCTCAGGCTAAAGCCCAAGGCGATTTGCCCATTGCAAGAAGAGCTTCCCTCCACCGATTCTTCGAGAAGAGAAAAGACAGG

mRNA sequence

ATGCCCGCTCCTTACGACAACGCCGCCGGCCGGAAGCCGGAGAAGTCCAGTTTTGCCCAGACTTGTAATCTCTTGAGCCAGTACTTGAAGGAGAAGAGAAACCATGGAGTCACGAGGATTGAATTCGAACCAAAAGATGAGGTTTCGACGGTTGGTCGACCGGCGGCGATCAGGAACTTGCTGACGAACATGGAAAGCCCAGAAGAGAAGGGCTCCGGGCAGATGACCATTTTCTACGGCGGAAAAGTAGTGGTGTTCAATGATCTTCCGCCGGAGAGGGCGGAGGAGATCATGGCCATGGCCGGCAAGGGAACGGCAACGACCCTCTCTTCCAGATCCGCCGCCGCCGGAGAACAACTCCATCCGCAACCTCAGGCTAAAGCCCAAGGCGATTTGCCCATTGCAAGAAGAGCTTCCCTCCACCGATTCTTCGAGAAGAGAAAAGACAGG

Coding sequence (CDS)

ATGCCCGCTCCTTACGACAACGCCGCCGGCCGGAAGCCGGAGAAGTCCAGTTTTGCCCAGACTTGTAATCTCTTGAGCCAGTACTTGAAGGAGAAGAGAAACCATGGAGTCACGAGGATTGAATTCGAACCAAAAGATGAGGTTTCGACGGTTGGTCGACCGGCGGCGATCAGGAACTTGCTGACGAACATGGAAAGCCCAGAAGAGAAGGGCTCCGGGCAGATGACCATTTTCTACGGCGGAAAAGTAGTGGTGTTCAATGATCTTCCGCCGGAGAGGGCGGAGGAGATCATGGCCATGGCCGGCAAGGGAACGGCAACGACCCTCTCTTCCAGATCCGCCGCCGCCGGAGAACAACTCCATCCGCAACCTCAGGCTAAAGCCCAAGGCGATTTGCCCATTGCAAGAAGAGCTTCCCTCCACCGATTCTTCGAGAAGAGAAAAGACAGG

Protein sequence

MPAPYDNAAGRKPEKSSFAQTCNLLSQYLKEKRNHGVTRIEFEPKDEVSTVGRPAAIRNLLTNMESPEEKGSGQMTIFYGGKVVVFNDLPPERAEEIMAMAGKGTATTLSSRSAAAGEQLHPQPQAKAQGDLPIARRASLHRFFEKRKDR

Homology

[Close]

BLAST of MS013243 vs. NCBI nr
Match: XP_022148111.1 (protein TIFY 11B-like [Momordica charantia])

HSP 1 Score: 288.1 bits (736), Expect = 4.3e-74
Identity = 146/150 (97.33%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 1   MPAPYDNAAGRKPEKSSFAQTCNLLSQYLKEKRNHGVTRIEFEPKDEVSTVGRPAAIRNL 60
           MPAP DNAAGRKPEKSSFAQTCNLLSQYLKEKR+ GVTRIE EPKDEVSTVGRPAAIRNL
Sbjct: 1   MPAPSDNAAGRKPEKSSFAQTCNLLSQYLKEKRSLGVTRIEIEPKDEVSTVGRPAAIRNL 60

Query: 61  LTNMESPEEKGSGQMTIFYGGKVVVFNDLPPERAEEIMAMAGKGTATTLSSRSAAAGEQL 120
           LTNMESPEEKGSGQMTIFYGGKVVVFNDLPPERAEEIMAMAGKGTATTLSSRSAAAGEQL
Sbjct: 61  LTNMESPEEKGSGQMTIFYGGKVVVFNDLPPERAEEIMAMAGKGTATTLSSRSAAAGEQL 120

Query: 121 HPQPQAKAQGDLPIARRASLHRFFEKRKDR 151
           HPQPQAKAQGDLPIARRASLHRFFEKRKDR
Sbjct: 121 HPQPQAKAQGDLPIARRASLHRFFEKRKDR 150

[Close]

BLAST of MS013243 vs. NCBI nr
Match: XP_022998211.1 (protein TIFY 10b-like [Cucurbita maxima])

HSP 1 Score: 176.4 bits (446), Expect = 1.8e-40
Identity = 108/174 (62.07%), Postives = 114/174 (65.52%), Query Frame = 0


Query: 1   MPAPYDNAAGRK----PEKSSFAQTCNLLSQYLKEKRNHGVTRIEFEPKDEVSTVGRPAA 60
           M  P DNAA RK    PEKSSFAQTCNLLSQYLKEKR  G++    EPKDE  T  RP A
Sbjct: 63  MSTPSDNAAARKPDRAPEKSSFAQTCNLLSQYLKEKRGLGISP-RIEPKDEFPT-PRPPA 122

Query: 61  IRNLLTNMESPEEKGSG------------QMTIFYGGKVVVFNDLPPERAEEIMAMAGKG 120
           I NLLTNME+PEEK  G            QMTIFY GKV+VFNDLP ERAEEIMAMA KG
Sbjct: 123 IMNLLTNMENPEEKAVGLFLPSAEPPSATQMTIFYDGKVLVFNDLPSERAEEIMAMASKG 182

Query: 121 TATTLSSRSAAAG--------EQLHPQPQAKAQGDLPIARRASLHRFFEKRKDR 151
             ++  S SAAA              QPQ K   DLPIARRASLHRFFEKRKDR
Sbjct: 183 VVSSSRSASAAAAVSNKVTEPAAAKKQPQTKVSCDLPIARRASLHRFFEKRKDR 234

[Close]

BLAST of MS013243 vs. NCBI nr
Match: XP_022949422.1 (protein TIFY 10b-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 175.3 bits (443), Expect = 4.1e-40
Identity = 108/174 (62.07%), Postives = 114/174 (65.52%), Query Frame = 0


Query: 1   MPAPYDNAA----GRKPEKSSFAQTCNLLSQYLKEKRNHGVTRIEFEPKDEVSTVGRPAA 60
           M  P DNAA    GR PEKSSFAQTCNLLSQYLKEKR  G++    EPKDE  T  RP A
Sbjct: 1   MSTPSDNAAARRLGRAPEKSSFAQTCNLLSQYLKEKRGLGISP-RIEPKDEFPT-PRPPA 60

Query: 61  IRNLLTNMESPEEKGSG------------QMTIFYGGKVVVFNDLPPERAEEIMAMAGKG 120
           I NLLTNM +PEEK  G            QMTIFY GKV+VFNDLP ERAEEIMAMAGKG
Sbjct: 61  IMNLLTNMVNPEEKAVGLFLPSAEPPSAMQMTIFYEGKVLVFNDLPSERAEEIMAMAGKG 120

Query: 121 TATTLSSRSAAAG--------EQLHPQPQAKAQGDLPIARRASLHRFFEKRKDR 151
             ++  S SAAA              QPQ K   DLPIARRASLHRFFEKRKDR
Sbjct: 121 IVSSSRSASAAAAVSNKVTEPAAAKEQPQTKVSCDLPIARRASLHRFFEKRKDR 172

[Close]

BLAST of MS013243 vs. NCBI nr
Match: XP_022949421.1 (protein TIFY 10b-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 170.6 bits (431), Expect = 1.0e-38
Identity = 108/186 (58.06%), Postives = 114/186 (61.29%), Query Frame = 0


Query: 1   MPAPYDNAA----GRKPEKSSFAQTCNLLSQYLKEKRNHGVTRIEFEPKDEVSTVGRPAA 60
           M  P DNAA    GR PEKSSFAQTCNLLSQYLKEKR  G++    EPKDE  T  RP A
Sbjct: 1   MSTPSDNAAARRLGRAPEKSSFAQTCNLLSQYLKEKRGLGISP-RIEPKDEFPT-PRPPA 60

Query: 61  IRNLLTNMESPEEKGSG------------QMTIFYGGKVVVFNDLPPERAEEIMAMAGKG 120
           I NLLTNM +PEEK  G            QMTIFY GKV+VFNDLP ERAEEIMAMAGKG
Sbjct: 61  IMNLLTNMVNPEEKAVGLFLPSAEPPSAMQMTIFYEGKVLVFNDLPSERAEEIMAMAGKG 120

Query: 121 TATTLSSRSAAAG--------------------EQLHPQPQAKAQGDLPIARRASLHRFF 151
             ++  S SAAA                          QPQ K   DLPIARRASLHRFF
Sbjct: 121 IVSSSRSASAAAAVSNKVTEPAAAAVSNKVTEPAAAKEQPQTKVSCDLPIARRASLHRFF 180

[Close]

BLAST of MS013243 vs. NCBI nr
Match: XP_022955789.1 (protein TIFY 10b-like [Cucurbita moschata])

HSP 1 Score: 169.1 bits (427), Expect = 2.9e-38
Identity = 103/171 (60.23%), Postives = 112/171 (65.50%), Query Frame = 0


Query: 1   MPAPYDNAA------GRKPEKSSFAQTCNLLSQYLKEKRNHGVTRIEFEPKDEVSTVGRP 60
           M  P D+AA      GR PEKSSFAQTCNLLSQYLKEKR+ G+T    EPKDE  T  RP
Sbjct: 1   MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITP-RIEPKDEFPT-ARP 60

Query: 61  AAIRNLLTNMESPEEK---------GSGQMTIFYGGKVVVFNDLPPERAEEIMAMAGKG- 120
            AI NLLTNME+PEEK          + QMTIFY GKV+VFNDLP E+AEEIM MAGKG 
Sbjct: 61  PAIMNLLTNMENPEEKEAVGLFLPPSATQMTIFYCGKVLVFNDLPSEKAEEIMTMAGKGI 120

Query: 121 -----TATTLSSRSAAAGEQLHPQPQAKAQGDLPIARRASLHRFFEKRKDR 151
                +A T+ S           QP  K   DLPIARRASLHRFFEKRKDR
Sbjct: 121 VPSSRSAATVVSDKVTEPVTTREQPPTKVSDDLPIARRASLHRFFEKRKDR 169

[Close]

BLAST of MS013243 vs. ExPASy Swiss-Prot
Match: A2Z1N3 (Protein TIFY 10c OS=Oryza sativa subsp. indica OX=39946 GN=TIFY10C PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 9.5e-16
Identity = 64/189 (33.86%), Postives = 90/189 (47.62%), Query Frame = 0


Query: 8   AAGRKPEKSSFAQTCNLLSQYLKEKRNHG------------------------------- 67
           AAG+  ++SSFA TC+LLSQ+LKEK+  G                               
Sbjct: 11  AAGK--DRSSFAVTCSLLSQFLKEKKGGGGGLQGLGLGLRPAPAAPPAAGAGGAFRPPPT 70

Query: 68  ---------VTRIEFEPK------DEVSTVGRPAAIRNLLTNMESPEEKGSGQMTIFYGG 127
                       +E EP       DE+  +  PA  ++  +  E+  EK   Q+TIFYGG
Sbjct: 71  TMNLLSGLDAPAVEVEPNTADTAADELPLIKAPADQQSDESASEAAGEKAQ-QLTIFYGG 130

Query: 128 KVVVFNDLPPERAEEIMAMAGKGTATTLSSRSAAAGEQLHPQPQAKAQGDLPIARRASLH 151
           KVVVF + P  + ++++ +   G     ++ +AA   Q  P+P   +  DLPIARR SLH
Sbjct: 131 KVVVFENFPSTKVKDLLQIVSTGDGVDKNTGTAAT--QSLPRPAHNSLPDLPIARRNSLH 190

[Close]

BLAST of MS013243 vs. ExPASy Swiss-Prot
Match: Q69P94 (Protein TIFY 10c OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY10C PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 9.5e-16
Identity = 64/189 (33.86%), Postives = 90/189 (47.62%), Query Frame = 0


Query: 8   AAGRKPEKSSFAQTCNLLSQYLKEKRNHG------------------------------- 67
           AAG+  ++SSFA TC+LLSQ+LKEK+  G                               
Sbjct: 11  AAGK--DRSSFAVTCSLLSQFLKEKKGGGGGLQGLGLGLRPAPAAPPAAGAGGAFRPPPT 70

Query: 68  ---------VTRIEFEPK------DEVSTVGRPAAIRNLLTNMESPEEKGSGQMTIFYGG 127
                       +E EP       DE+  +  PA  ++  +  E+  EK   Q+TIFYGG
Sbjct: 71  TMNLLSGLDAPAVEVEPNTAETAADELPLIKAPADQQSDESASEAAGEKAQ-QLTIFYGG 130

Query: 128 KVVVFNDLPPERAEEIMAMAGKGTATTLSSRSAAAGEQLHPQPQAKAQGDLPIARRASLH 151
           KVVVF + P  + ++++ +   G     ++ +AA   Q  P+P   +  DLPIARR SLH
Sbjct: 131 KVVVFENFPSTKVKDLLQIVSTGDGVDKNTGTAAT--QSLPRPAHNSLPDLPIARRNSLH 190

[Close]

BLAST of MS013243 vs. ExPASy Swiss-Prot
Match: Q9C9E3 (Protein TIFY 11B OS=Arabidopsis thaliana OX=3702 GN=TIFY11B PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 9.5e-16
Identity = 60/201 (29.85%), Postives = 94/201 (46.77%), Query Frame = 0


Query: 8   AAGRKPEKSSFAQTCNLLSQYLKEKRNHGVTRIEFEPKDEVSTVGR--PAAIRNLLTNME 67
           + G+ PEKS+F+Q C+LLS+YLKEK + G   +    K ++   G+      +N++  +E
Sbjct: 2   STGQAPEKSNFSQRCSLLSRYLKEKGSFGNINMGLARKSDLELAGKFDLKGQQNVIKKVE 61

Query: 68  SPE------------------------------------EKGSGQMTIFYGGKVVVFNDL 127
           + E                                    E G+ Q+TIF+GGKV+VFN+ 
Sbjct: 62  TSETRPFKLIQKFSIGEASTSTEDKAIYIDLSEPAKVAPESGNSQLTIFFGGKVMVFNEF 121

Query: 128 PPERAEEIMAMAGKGTATTLSSRSA--------------------AAGEQLHPQPQAKAQ 151
           P ++A+EIM +A +     + S+++                    ++G     +   + Q
Sbjct: 122 PEDKAKEIMEVAKEANHVAVDSKNSQSHMNLDKSNVVIPDLNEPTSSGNNEDQETGQQHQ 181

[Close]

BLAST of MS013243 vs. ExPASy Swiss-Prot
Match: Q9S7M2 (Protein TIFY 10B OS=Arabidopsis thaliana OX=3702 GN=TIFY10B PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.8e-15
Identity = 67/214 (31.31%), Postives = 90/214 (42.06%), Query Frame = 0


Query: 9   AGRKPEKSSFAQTCNLLSQYLKEKRNHGVTRIEFEPKDEVSTVGRPAAIRNLLTNMESPE 68
           +GRKP   SF+QTC  LS+YLKEK + G   +    K +V+   R   + NL     S  
Sbjct: 12  SGRKP---SFSQTCTRLSRYLKEKGSFGDLSLGMTCKPDVNGGSRQPTMMNLFPCEASGM 71

Query: 69  EKGSGQ---------------------------------------------MTIFYGGKV 128
           +  +GQ                                             +TIFYGG+V
Sbjct: 72  DSSAGQEDIKPKTMFPRQSSFSSSSSSGTKEDVQMIKETTKSVKPESQSAPLTIFYGGRV 131

Query: 129 VVFNDLPPERAEEIMAMAGKGTATTL---------------------------SSRSAAA 151
           +VF+D   E+A+E++ +A KG+A +                            S    AA
Sbjct: 132 MVFDDFSAEKAKEVIDLANKGSAKSFTCFTAEVNNNHSAYSQKEIASSPNPVCSPAKTAA 191

[Close]

BLAST of MS013243 vs. ExPASy Swiss-Prot
Match: A2XD79 (Protein TIFY 11c OS=Oryza sativa subsp. indica OX=39946 GN=TIFY11C PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.7e-15
Identity = 59/156 (37.82%), Postives = 76/156 (48.72%), Query Frame = 0


Query: 16  SSFAQTCNLLSQYLKEKRNH--------GVTRIEF-----EPKDEVSTVGR-----PAAI 75
           S FA TC LL QY+KE             VT +       + ++E   V +     P   
Sbjct: 23  SRFAVTCGLLRQYMKEHSGSNGGGGFLPAVTAMSLMTGGADAEEEAPEVRKTMELFPQQA 82

Query: 76  RNLLTNMESPEEKGSGQMTIFYGGKVVVFNDLPPERAEEIMAMAGKGTAT---TLSSRSA 135
             L    E  E     Q+TIFYGG VVVF+D P E+A E+M +AG   +T    +S   A
Sbjct: 83  GTLKDTQERKEITEKAQLTIFYGGSVVVFDDFPAEKAGELMKLAGSRDSTAAAAVSDAGA 142

Query: 136 AAGEQLHPQPQAKAQGDLPIARRASLHRFFEKRKDR 151
           AAG+   P        D+PIAR+ SL RF EKRK+R
Sbjct: 143 AAGQPCLP--------DMPIARKVSLQRFLEKRKNR 170

[Close]

BLAST of MS013243 vs. ExPASy TrEMBL
Match: A0A6J1D4E0 (protein TIFY 11B-like OS=Momordica charantia OX=3673 GN=LOC111016866 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.1e-74
Identity = 146/150 (97.33%), Postives = 147/150 (98.00%), Query Frame = 0


Query: 1   MPAPYDNAAGRKPEKSSFAQTCNLLSQYLKEKRNHGVTRIEFEPKDEVSTVGRPAAIRNL 60
           MPAP DNAAGRKPEKSSFAQTCNLLSQYLKEKR+ GVTRIE EPKDEVSTVGRPAAIRNL
Sbjct: 1   MPAPSDNAAGRKPEKSSFAQTCNLLSQYLKEKRSLGVTRIEIEPKDEVSTVGRPAAIRNL 60

Query: 61  LTNMESPEEKGSGQMTIFYGGKVVVFNDLPPERAEEIMAMAGKGTATTLSSRSAAAGEQL 120
           LTNMESPEEKGSGQMTIFYGGKVVVFNDLPPERAEEIMAMAGKGTATTLSSRSAAAGEQL
Sbjct: 61  LTNMESPEEKGSGQMTIFYGGKVVVFNDLPPERAEEIMAMAGKGTATTLSSRSAAAGEQL 120

Query: 121 HPQPQAKAQGDLPIARRASLHRFFEKRKDR 151
           HPQPQAKAQGDLPIARRASLHRFFEKRKDR
Sbjct: 121 HPQPQAKAQGDLPIARRASLHRFFEKRKDR 150

[Close]

BLAST of MS013243 vs. ExPASy TrEMBL
Match: A0A6J1K9M8 (protein TIFY 10b-like OS=Cucurbita maxima OX=3661 GN=LOC111492925 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 8.9e-41
Identity = 108/174 (62.07%), Postives = 114/174 (65.52%), Query Frame = 0


Query: 1   MPAPYDNAAGRK----PEKSSFAQTCNLLSQYLKEKRNHGVTRIEFEPKDEVSTVGRPAA 60
           M  P DNAA RK    PEKSSFAQTCNLLSQYLKEKR  G++    EPKDE  T  RP A
Sbjct: 63  MSTPSDNAAARKPDRAPEKSSFAQTCNLLSQYLKEKRGLGISP-RIEPKDEFPT-PRPPA 122

Query: 61  IRNLLTNMESPEEKGSG------------QMTIFYGGKVVVFNDLPPERAEEIMAMAGKG 120
           I NLLTNME+PEEK  G            QMTIFY GKV+VFNDLP ERAEEIMAMA KG
Sbjct: 123 IMNLLTNMENPEEKAVGLFLPSAEPPSATQMTIFYDGKVLVFNDLPSERAEEIMAMASKG 182

Query: 121 TATTLSSRSAAAG--------EQLHPQPQAKAQGDLPIARRASLHRFFEKRKDR 151
             ++  S SAAA              QPQ K   DLPIARRASLHRFFEKRKDR
Sbjct: 183 VVSSSRSASAAAAVSNKVTEPAAAKKQPQTKVSCDLPIARRASLHRFFEKRKDR 234

[Close]

BLAST of MS013243 vs. ExPASy TrEMBL
Match: A0A6J1GBZ2 (protein TIFY 10b-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452772 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 2.0e-40
Identity = 108/174 (62.07%), Postives = 114/174 (65.52%), Query Frame = 0


Query: 1   MPAPYDNAA----GRKPEKSSFAQTCNLLSQYLKEKRNHGVTRIEFEPKDEVSTVGRPAA 60
           M  P DNAA    GR PEKSSFAQTCNLLSQYLKEKR  G++    EPKDE  T  RP A
Sbjct: 1   MSTPSDNAAARRLGRAPEKSSFAQTCNLLSQYLKEKRGLGISP-RIEPKDEFPT-PRPPA 60

Query: 61  IRNLLTNMESPEEKGSG------------QMTIFYGGKVVVFNDLPPERAEEIMAMAGKG 120
           I NLLTNM +PEEK  G            QMTIFY GKV+VFNDLP ERAEEIMAMAGKG
Sbjct: 61  IMNLLTNMVNPEEKAVGLFLPSAEPPSAMQMTIFYEGKVLVFNDLPSERAEEIMAMAGKG 120

Query: 121 TATTLSSRSAAAG--------EQLHPQPQAKAQGDLPIARRASLHRFFEKRKDR 151
             ++  S SAAA              QPQ K   DLPIARRASLHRFFEKRKDR
Sbjct: 121 IVSSSRSASAAAAVSNKVTEPAAAKEQPQTKVSCDLPIARRASLHRFFEKRKDR 172

[Close]

BLAST of MS013243 vs. ExPASy TrEMBL
Match: A0A6J1GBZ3 (protein TIFY 10b-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452772 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 4.9e-39
Identity = 108/186 (58.06%), Postives = 114/186 (61.29%), Query Frame = 0


Query: 1   MPAPYDNAA----GRKPEKSSFAQTCNLLSQYLKEKRNHGVTRIEFEPKDEVSTVGRPAA 60
           M  P DNAA    GR PEKSSFAQTCNLLSQYLKEKR  G++    EPKDE  T  RP A
Sbjct: 1   MSTPSDNAAARRLGRAPEKSSFAQTCNLLSQYLKEKRGLGISP-RIEPKDEFPT-PRPPA 60

Query: 61  IRNLLTNMESPEEKGSG------------QMTIFYGGKVVVFNDLPPERAEEIMAMAGKG 120
           I NLLTNM +PEEK  G            QMTIFY GKV+VFNDLP ERAEEIMAMAGKG
Sbjct: 61  IMNLLTNMVNPEEKAVGLFLPSAEPPSAMQMTIFYEGKVLVFNDLPSERAEEIMAMAGKG 120

Query: 121 TATTLSSRSAAAG--------------------EQLHPQPQAKAQGDLPIARRASLHRFF 151
             ++  S SAAA                          QPQ K   DLPIARRASLHRFF
Sbjct: 121 IVSSSRSASAAAAVSNKVTEPAAAAVSNKVTEPAAAKEQPQTKVSCDLPIARRASLHRFF 180

[Close]

BLAST of MS013243 vs. ExPASy TrEMBL
Match: A0A6J1GXA0 (protein TIFY 10b-like OS=Cucurbita moschata OX=3662 GN=LOC111457672 PE=3 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.4e-38
Identity = 103/171 (60.23%), Postives = 112/171 (65.50%), Query Frame = 0


Query: 1   MPAPYDNAA------GRKPEKSSFAQTCNLLSQYLKEKRNHGVTRIEFEPKDEVSTVGRP 60
           M  P D+AA      GR PEKSSFAQTCNLLSQYLKEKR+ G+T    EPKDE  T  RP
Sbjct: 1   MSNPSDSAAAACRRSGRAPEKSSFAQTCNLLSQYLKEKRSLGITP-RIEPKDEFPT-ARP 60

Query: 61  AAIRNLLTNMESPEEK---------GSGQMTIFYGGKVVVFNDLPPERAEEIMAMAGKG- 120
            AI NLLTNME+PEEK          + QMTIFY GKV+VFNDLP E+AEEIM MAGKG 
Sbjct: 61  PAIMNLLTNMENPEEKEAVGLFLPPSATQMTIFYCGKVLVFNDLPSEKAEEIMTMAGKGI 120

Query: 121 -----TATTLSSRSAAAGEQLHPQPQAKAQGDLPIARRASLHRFFEKRKDR 151
                +A T+ S           QP  K   DLPIARRASLHRFFEKRKDR
Sbjct: 121 VPSSRSAATVVSDKVTEPVTTREQPPTKVSDDLPIARRASLHRFFEKRKDR 169

[Close]

BLAST of MS013243 vs. TAIR 10
Match: AT1G72450.1 (jasmonate-zim-domain protein 6 )

HSP 1 Score: 84.7 bits (208), Expect = 6.8e-17
Identity = 60/201 (29.85%), Postives = 94/201 (46.77%), Query Frame = 0


Query: 8   AAGRKPEKSSFAQTCNLLSQYLKEKRNHGVTRIEFEPKDEVSTVGR--PAAIRNLLTNME 67
           + G+ PEKS+F+Q C+LLS+YLKEK + G   +    K ++   G+      +N++  +E
Sbjct: 2   STGQAPEKSNFSQRCSLLSRYLKEKGSFGNINMGLARKSDLELAGKFDLKGQQNVIKKVE 61

Query: 68  SPE------------------------------------EKGSGQMTIFYGGKVVVFNDL 127
           + E                                    E G+ Q+TIF+GGKV+VFN+ 
Sbjct: 62  TSETRPFKLIQKFSIGEASTSTEDKAIYIDLSEPAKVAPESGNSQLTIFFGGKVMVFNEF 121

Query: 128 PPERAEEIMAMAGKGTATTLSSRSA--------------------AAGEQLHPQPQAKAQ 151
           P ++A+EIM +A +     + S+++                    ++G     +   + Q
Sbjct: 122 PEDKAKEIMEVAKEANHVAVDSKNSQSHMNLDKSNVVIPDLNEPTSSGNNEDQETGQQHQ 181

[Close]

BLAST of MS013243 vs. TAIR 10
Match: AT1G74950.1 (TIFY domain/Divergent CCT motif family protein )

HSP 1 Score: 83.2 bits (204), Expect = 2.0e-16
Identity = 67/214 (31.31%), Postives = 90/214 (42.06%), Query Frame = 0


Query: 9   AGRKPEKSSFAQTCNLLSQYLKEKRNHGVTRIEFEPKDEVSTVGRPAAIRNLLTNMESPE 68
           +GRKP   SF+QTC  LS+YLKEK + G   +    K +V+   R   + NL     S  
Sbjct: 12  SGRKP---SFSQTCTRLSRYLKEKGSFGDLSLGMTCKPDVNGGSRQPTMMNLFPCEASGM 71

Query: 69  EKGSGQ---------------------------------------------MTIFYGGKV 128
           +  +GQ                                             +TIFYGG+V
Sbjct: 72  DSSAGQEDIKPKTMFPRQSSFSSSSSSGTKEDVQMIKETTKSVKPESQSAPLTIFYGGRV 131

Query: 129 VVFNDLPPERAEEIMAMAGKGTATTL---------------------------SSRSAAA 151
           +VF+D   E+A+E++ +A KG+A +                            S    AA
Sbjct: 132 MVFDDFSAEKAKEVIDLANKGSAKSFTCFTAEVNNNHSAYSQKEIASSPNPVCSPAKTAA 191

[Close]

BLAST of MS013243 vs. TAIR 10
Match: AT1G19180.1 (jasmonate-zim-domain protein 1 )

HSP 1 Score: 81.6 bits (200), Expect = 5.7e-16
Identity = 68/205 (33.17%), Postives = 94/205 (45.85%), Query Frame = 0


Query: 10  GRKPEKSSFAQTCNLLSQYLKEKRNHGVTRIEFEPKDEVS-TVG---RPAAIRNLL---- 69
           G+KP   SF+QTC+ LSQYLKE  + G   +    K +V+ T+G   +P    +L     
Sbjct: 18  GKKP---SFSQTCSRLSQYLKENGSFGDLSLGMACKPDVNGTLGNSRQPTTTMSLFPCEA 77

Query: 70  TNMES---------------------------------------PEEKGSGQMTIFYGGK 129
           +NM+S                                         E  +  +TIFY G+
Sbjct: 78  SNMDSMVQDVKPTNLFPRQPSFSSSSSSLPKEDVLKMTQTTRSVKPESQTAPLTIFYAGQ 137

Query: 130 VVVFNDLPPERAEEIMAMAGKGTATTL--------SSRSAAAGEQLHP---------QPQ 151
           V+VFND   E+A+E++ +A KGTA +L        S+ +  A +  HP         Q  
Sbjct: 138 VIVFNDFSAEKAKEVINLASKGTANSLAKNQTDIRSNIATIANQVPHPRKTTTQEPIQSS 197

[Close]

BLAST of MS013243 vs. TAIR 10
Match: AT1G17380.1 (jasmonate-zim-domain protein 5 )

HSP 1 Score: 80.9 bits (198), Expect = 9.8e-16
Identity = 64/200 (32.00%), Postives = 100/200 (50.00%), Query Frame = 0


Query: 1   MPAPYDNAAGRKPEKSSFAQTCNLLSQYLKEKRNHGVTRI--------------EFEPKD 60
           M +  +NA  + PEKS F + C+LLS+YLKEK + G   +              +F+P  
Sbjct: 1   MSSSNENAKAQAPEKSDFTRRCSLLSRYLKEKGSFGNIDLGLYRKPDSSLALPGKFDPPG 60

Query: 61  EVSTV-------GRPAA-----IRNLLTNMESPEEKGSGQMTIFYGGKVVVFNDLPPERA 120
           + + +       G P+      ++++    ES  + GS Q+TIF+GGKV+V+N+ P ++A
Sbjct: 61  KQNAMHKAGHSKGEPSTSSGGKVKDVADLSES--QPGSSQLTIFFGGKVLVYNEFPVDKA 120

Query: 121 EEIMAMAGKGTATT------------LSSRSAAAGEQLH----------PQPQAKAQGDL 151
           +EIM +A +    T             +++S+     L+           Q Q + Q  +
Sbjct: 121 KEIMEVAKQAKPVTEINIQTPINDENNNNKSSMVLPDLNEPTDNNHLTKEQQQQQEQNQI 180

[Close]

BLAST of MS013243 vs. TAIR 10
Match: AT1G19180.2 (jasmonate-zim-domain protein 1 )

HSP 1 Score: 73.6 bits (179), Expect = 1.6e-13
Identity = 45/119 (37.82%), Postives = 64/119 (53.78%), Query Frame = 0


Query: 49  STVGRPAAIRNLLTNMESPEEKGSGQMTIFYGGKVVVFNDLPPERAEEIMAMAGKGTATT 108
           S++ +   ++   T      E  +  +TIFY G+V+VFND   E+A+E++ +A KGTA +
Sbjct: 35  SSLPKEDVLKMTQTTRSVKPESQTAPLTIFYAGQVIVFNDFSAEKAKEVINLASKGTANS 94

Query: 109 L--------SSRSAAAGEQLHP---------QPQAKAQGDLPIARRASLHRFFEKRKDR 151
           L        S+ +  A +  HP         Q       +LPIARRASLHRF EKRKDR
Sbjct: 95  LAKNQTDIRSNIATIANQVPHPRKTTTQEPIQSSPTPLTELPIARRASLHRFLEKRKDR 153

The following BLAST results are available for this feature:

BLAST of MS013243 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148111.1	4.3e-74	97.33	protein TIFY 11B-like [Momordica charantia]	[more]
XP_022998211.1	1.8e-40	62.07	protein TIFY 10b-like [Cucurbita maxima]	[more]
XP_022949422.1	4.1e-40	62.07	protein TIFY 10b-like isoform X2 [Cucurbita moschata]	[more]
XP_022949421.1	1.0e-38	58.06	protein TIFY 10b-like isoform X1 [Cucurbita moschata]	[more]
XP_022955789.1	2.9e-38	60.23	protein TIFY 10b-like [Cucurbita moschata]	[more]

BLAST of MS013243 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2Z1N3	9.5e-16	33.86	Protein TIFY 10c OS=Oryza sativa subsp. indica OX=39946 GN=TIFY10C PE=3 SV=1	[more]
Q69P94	9.5e-16	33.86	Protein TIFY 10c OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY10C PE=1 SV=1	[more]
Q9C9E3	9.5e-16	29.85	Protein TIFY 11B OS=Arabidopsis thaliana OX=3702 GN=TIFY11B PE=1 SV=1	[more]
Q9S7M2	2.8e-15	31.31	Protein TIFY 10B OS=Arabidopsis thaliana OX=3702 GN=TIFY10B PE=1 SV=1	[more]
A2XD79	4.7e-15	37.82	Protein TIFY 11c OS=Oryza sativa subsp. indica OX=39946 GN=TIFY11C PE=3 SV=1	[more]

BLAST of MS013243 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D4E0	2.1e-74	97.33	protein TIFY 11B-like OS=Momordica charantia OX=3673 GN=LOC111016866 PE=3 SV=1	[more]
A0A6J1K9M8	8.9e-41	62.07	protein TIFY 10b-like OS=Cucurbita maxima OX=3661 GN=LOC111492925 PE=3 SV=1	[more]
A0A6J1GBZ2	2.0e-40	62.07	protein TIFY 10b-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452772 P...	[more]
A0A6J1GBZ3	4.9e-39	58.06	protein TIFY 10b-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452772 P...	[more]
A0A6J1GXA0	1.4e-38	60.23	protein TIFY 10b-like OS=Cucurbita moschata OX=3662 GN=LOC111457672 PE=3 SV=1	[more]

BLAST of MS013243 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72450.1	6.8e-17	29.85	jasmonate-zim-domain protein 6	[more]
AT1G74950.1	2.0e-16	31.31	TIFY domain/Divergent CCT motif family protein	[more]
AT1G19180.1	5.7e-16	33.17	jasmonate-zim-domain protein 1	[more]
AT1G17380.1	9.8e-16	32.00	jasmonate-zim-domain protein 5	[more]
AT1G19180.2	1.6e-13	37.82	jasmonate-zim-domain protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010399	Tify domain	SMART	SM00979	tify_2	coord: 68..103 e-value: 1.0E-14 score: 64.9
IPR010399	Tify domain	PFAM	PF06200	tify	coord: 71..102 e-value: 6.4E-17 score: 60.6
IPR010399	Tify domain	PROSITE	PS51320	TIFY	coord: 68..103 score: 16.574282
IPR018467	CO/COL/TOC1, conserved site	PFAM	PF09425	Jas_motif	coord: 133..150 e-value: 6.3E-9 score: 35.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..134
None	No IPR available	PANTHER	PTHR33077:SF112	PROTEIN TIFY 10A-LIKE	coord: 10..70 coord: 69..150
IPR040390	TIFY/JAZ family	PANTHER	PTHR33077	PROTEIN TIFY 4A-RELATED-RELATED	coord: 10..70 coord: 69..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013243.1	MS013243.1	mRNA