MS013242 (gene) Bitter gourd (TR) v1

Overview


Name	MS013242
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	oligouridylate-binding protein 1B-like
Location	scaffold459: 1488270 .. 1495200 (-)
RNA-Seq Expression	MS013242
Synteny	MS013242

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGATTGAGCCAATCCCTAGTGGAAATCTACCTCCTGGTTTTGATGCAAGTACTTGCCGCAGTGTGTGAGTGTTTGCCTGGATACTATCCTTTCATTTGTTTTTTTGAAAATTTTTTTGTTTAACTACCTCATAATTTTTTTTGTTTTTATTTTTGTTTAACTATATTTATTCTTACTTTTAGTTGGATTTCTTCCTCCATTGCATAAAGCTGTGTTATCAATCACTATGTTTGTGTACCATTGAAAAGATTTCCTATGTTGCTTTTTCAATAATAGTTTCATATGTTTCCATTATTGGGATTAAATTCTATTATTGTTATTATTTGAGTCATTTTACTGATGATGATTATTAGAGTCTGTGCACTAACTAAATTTATGAGATGTATTGCTGATTTCGTAATTATCTTCTCTTGTTGCATTTCTCCATTCTCTCTCATCATTTGATTTATTGCATAATTGCTTTTGGAAAATTCAGATATGTTGGAAACATCCATGCACAAGTAACAGAACCACTTCTTCAAGAGGTTTTTGGTAGTATTGGTCTCGTTGAAGGGTGTAAGCTTGTGAGGAAGGAGAAGGTTTGTCTTTTTGTGTGTACATTAAACTCTAGATTAGTATTGGCCTTGTTAGAAATTGCTTGTTATCTTTTATGTTTTGAGCCCATTAGCCAGTTGTAATCATACTGATCTACATGTGTGTTGCTCTGCTTTAAGTAGTCATCCTATGGATTTGTCCACTACTTTGATCGAAGATCAGCTGCCCTTGCTATTTTGTCACTCAATGGGAGGCATTTGTGAGTAGAACTGTGGGATTTTTAAAAACTTTTACGTCAATTCTTCTTCTTCTTCTTCTTCTTCTTATTTTGTAGTATCATCTCAGAAGTATTTTGTACATGGCAGGTTTGGGCAGCCTATCAAAGTTAACTGGGCATATGCTAGCAGTCAGAGGGAAGACACATCAGGTTGGATTTTCTATTGATAATTATTCCATTTACTGGTTTTATAATGGTTTTTTTATTATCAAAATAAAATTTCCACAATCATGTAAAACTATTGTTTATTTGTGCAGGTCATTTCAACATTTTTGTTGGTGATCTTAGCCCTGAGGTCACTGATGCTATGTTGTTTGCATGCTTTTCTGTTTACTCCAGTTGCTCGTAAGCACTATTTCTTTAGATACTAAACATTGTTTCTCGTATTTTTTTTTTAACTGTCCATTTAACGGCTCCTTAAACACGAGGAAATAAGATTCATTGTGTGTGTATATAAAATTTAAAATTTAAAGGAAACATAAGTTTTCACTGCAATTATGAAAAGTTACATACAAGGTTACATAAAAACTCTCACTGAAACCTCCCTGTAGAAGTATGTATAAGAAACAAGCCCCTCAATAAAAAAAAAACCAATAACAGAACAATCCCACCTACATGTTTCCTTGTCAGGCAAAAAAGGACAACCCACCTAAATCGGACAAAAACTGAAGAACACAACCAAGACTTGAGTGGTCGACGAACAAAAAACCATAGATTTATTTCCTTTTAGGAGCTCACAAGCCTTTTAAACACGATGGATCTATCTGGCCAATCCTTACAATGAAGCTTTAAATGAGATGAACCAAAGACTGTTGAAATCCTGCAAACTTCTAGAATGTCAACAACTCCATAATTTCCATGGGAAAAGCGACTGCAATTACAAAGTTAAGACTTAAAGACAGTCTCCAAAGCTGGAAGAAAACTTCAGAAAGACATAAAGGGTAGCAGGTTTCTTTCCACCAATTCTTAAAATAACATGTCTGACCATAGCCCTAAAATGGAACTTATCTCTGCCGAACTAAAGCCCCTCACTCTTCCTCTTCATAGACATCCTTTCTTAAGATTCTTTGGTTAAGACTAAGATAATATTATCATGATGCTTTGACTAAAAATTGAGTTTTTGAACAAGTCTTATTGATCGATGCAACTTAATCACACCCTTTTATTAATTTCAGAGATGCTAGGGTTATGTGGGATCAGAAGACTGGGCGATCAAGAGGGTTTGGGTTTGTTTCCTTCCGAAACCAGCAGGTTTTGAATTTCTTCTCAGTGCTTGCTAACTGTTCATTCTTTAATTCTGTTCTGAAGAATGAACATTTTGATGCACCTCTTTCAGGAAGCTCAAAGTGCAATCAATGACTTAACTGGTATGTTTTAGTTCTGCTCTTTTGCCTTGATGGTTGCCTGCCAGCCCTTGTAATGTCTTTTGGGGTCTTCTAGTCACTATGGTAGATTTATGCTTGCAAGTCATTAATCCGATCACTTTTTGGTCTGTTTTTTCCACTCAGGTAAGTGGCTTGGGAGTAGACAGATACGTTGTAACTGGGCAACCAAAGGTGCTGGCGTGAATGAAGATAAACAGGGCTCAGATACCAAAAGCGTGGTAGAACTAACAAATTGCTCATCTGGTCAGTTTTGTACAGAATCTGGACCACAAATCATGCAGATTGCTTTCTTTTATTTCATCAGTTACTGCAGAGATTCTTACCTTCCTATTCTATTAAAACCCTAAAACTAAATTATGATCCATTTATATGACTAAGAAGCAGAAGAACTCTCTTTCTGTGCAAGTTCGATATTTGCTTCTGTGACATTGGTATTAGAGTAAGATCTGAAAAGCTTACATTTATTGCTGTGATACTGCAGAAGATGGTAAAGAGTCTGTAAATAATGAGGCTCCCGAGAACAATCCTCAATATACTACTGTATATGTGGGTAATCTTGCTCCAGAGGTAAGAAACCACCTTCATTACTTCGTGACCAAACTATTTAGCTCTTTAACATGCATGTAGAATGTGCACTAGCACACAAAGTTTTATTACGGGACTCCATGTAGAGGGGGAAAAGATGCTTAGGGGTGTTACGCCATCACTTGTGGAGGGTGTGTGATAACATTCTCCTAAAAGTCATTGTTTGGGTATCTGTCTCATTTGGAATCGGTTATTCCTTGTCTGCAGGTCACTCAACTTGATCTACATCACCATTTTCATTCTCTAGGTGCTGGGGTGATAGAGGAGGTCCGAATTCAGCGGGATAAAGGATTTGGTTTTGTGAGGTATAATACTCATGCTGAGGCAGCTCTGGCTATTCAGATGGGCAATACTCGGTCTTTTCTTTGTGGCAGACAAATAAAGGTATGGTTCTGCTTTATATGGTGAAGCTACTGTATTGCTGCCAAGTGCCATATTGTCCATCACGAAGACTATAATAAAATATGAACCGCATGTCACTTATTCATTGCTGCTGGTTAACTCTGCTGAAGTTCTTGGATGGTATTGATCATGATTCATTTAAGGGAAGGAGCTCACTTTTTGGCAGTTTAACAGTCCATATTCTATAGATTTTGGTCTTATCTGATGTAATTGGGCCCCCTGAATATAAAAGAGAAGGTGCATAATGCTCTAGATTCGACAGTTGGCTCCATTTTGGGTGCATAATCAGTGCTTTTCTGTTTTAGGTTTTTTCTCATACACAAAAAGTATAGTCGTCGTCTTACTGAACAGTCATTAAGTGTCAAGCTGTCAATTGCTATCTTTCATTTTCAATTACAGCTGTCAAATTTCCAGGTCTTTAATACATCTAATCTTCTATGATCTCCTGGAAATTTCCATCCATCCTCTCTTCCCCCTAGTTCCTTGCCACGTTCTTCATGGCCTCTGCTCCCTTTTCCTTGTCCTACGTTCGTCCCTCGTTCCACCAAGATTGAGTGGAAATCTCTCTTTAGGCACTGAAGTTGGTAATGCCCATGGTGGCGGCAAGGTCAGGCTCTCAGAACTGGGTAAAGATAACACATACTCAATTTTCATTCGTTGGATTGGTGTGCATTGGCTCTCCAACCCATTTTCCAGCTACTATACTGGATCCTACGTTTTGTTTTTTTTGAACAAGATACAAAATTTTCATTGATGAATGAAAATAAACAAAGAGTTCTTCAAGGATACAAACTCCAAAAAGGATATGTTCCGTGGGTTGAGGAAACCACTAACCAAAAGGGCTCTCTCAATGAGATTATAAATGTTAAGGATCCCACATTGAAAAGAAAAAGGACCGACCTTACATTGGTTTATAATAGGCATGAGCTACTCCTCTCATTACCAATTAGTTTTGAGATGGAATCCCATGAATATTAATAATAAAGAATGATTCCCCCACAAAATGCCGATTCAAATGGATTGAAAACGATGTTACTACATGGATCAGAGTTCAAAATTCCCCCATCCCTGAACAGCCTTTCTCCTCTGTCTCTTTTATTGAGCTTCAAAATCTAGCATTTCAATCTTCTTGATCTATAATCTTCCACTGCTTCAATCTTCTTGATCTATAATCTTCCACTGCTTCGTTTGCAATCAGAATGGTGTCTAGAACTTGTCATCCTTCTATAAAAGCACTCTGAGTACAAGAAATTGTAGAATTCCTTACTGACTTTAATTTTTCAGCAAATACGTGGATGTAGTTAAACTAATTGACCTGAAATCCTTGACCGTAGAGGCTGTTTCTTTCTTTAAAATGAGGCAGATGAAATTCTCCTTCAGAAAATCACATGCCCATTTTTAAAGAATTCCTGGAATAGTCTGATGAAATCCGGCTTTAAGACATCCCAAAATTTGGAGGAGAATTCCATAGTGATTCCATCGGGGCTTGGAGCTTTATTTTTAGCTGGAAAGAAACGGGGAAATCAATTGGGCACTCATGGCTGGAGAAATAGGCTTCCAATTAAAATTAGCTGGAAAGAGACGATGCTCTGGAATTCTTTTGTGTAAAGATGAAAAGAAATAAGTAATTTCTGATTCAATGGCACCAAAATCTACCAAAAGATTCCCATTAATAGAGTGCAGATGAGAAATTAACCTCTTCCTCTTCTTTGCTACCAAGTATTTATGAAAACATCTCGTGTTCTCACCCCCTTTTAACCACTGAAGCTTGCCTTTCTGAATTAAATTCCTTTCCTCCAAAGTGAAGGCTTAATACGCATTTGAAGAGTGATCTCAAAGTGATATCTTCTTGATCAATGGTTCCAGGCTTCCAGCTTTTTCTTTTGAATCTATCAAACTGATTTCCTTGAGAATTGAAGACTCCTTTTCCTTTTTTGACGTTTCAAATCTGAGATTCCAAACTTTAAGAACTGTTTTGAAATTCTGAAGCATAGAGTGAATAGCAAAACCAGCCCATCCGAAGGAAATATCCTCATTCAAAGTCTTCATAATTATAGAATCTGAACGGAGAAGGTCCGCACAAAAAACTACCAGCTTCAAGGAGAATAGGGAAGCGATCAGAAACCGCCCGAGATAACTTGGAAGCTCTCGAATTTTAAAATTTCAAATCCCTACCTTTGGAGATAAAAAATCTGTCTAACAAAGATTGCTTTTGATATCTCCATGGTAGACCATGTAAATTTACCATTAGAAAGGAGAATGTCCAGTAAGTTAAGCTCTCCAATAATGCCATTGAATTTCGTCGTACTTGTAATAATGCCCATTGGATATCTTTCATGTGACCATCGAGTAATGTTGGAATCTCCTCCCCCTTTTAAATGACACCCCCAAATACCTTTCCTTTTGGAAGCAATTATTGGGAAGAAAAACAGAAACCAAGATTATGAAGCTCTTCTTTCTCCAAACGTGGTAGGCACCCTAATTCTTGCTTCCCTCTTAAATTTAAATCCTCCCATTTTACTATACATCCCTTTTCAAGATAACAAGAAAGTCGTCTCCATTATTGAGAAATTTCTGTAGATCTTCTATTCGGAGAGCAAAAATCCTACCATGAGTTTCCATTTAGTCAACTGGAAAAGTACTCTTGCCCCATCATCTCTGGCGGCCTAGGTTTGTGAGATTTATTCCAAAATCAGGTATTTCTTGCCTAGTGGAGCTGGAATTTTGCTGTAGAAAAGGAAGCTCTTTGGAGAAGACTCATTTTGGCCAAATATGGTCCCACCTCTGCAGACTGATGGCCTAATTGTCACTTAAACAATCAGGCTAAAAGTCCTTGGAAAGATATATGGGAGGCCAGAAATCTTAGCACATCCAGAATTTGTTTTTTGGTTGGCAATGGTCTCCATATCAAATTGTTTAAGGATGCTTGGAGATGTTCCACCCCTCGTGCGTCCCTCTTTCCAAATCTCTACAGCTTAAATCCACAAATCTATTGCTCATCTTTGGAACATGGAGATTCCAATGTGGAACATAAATTTCAGAAGGCACTTTATGGACAAGGAGTTTCAAGTTCGGCTATTTCTTGCATGGGTTTCATCGATGGTTGTTGTCTAACATCCATTTCTGATTCTGGGCACTGGGAATGGATTAGCTTCAACTAGAAGAGGTTACAATTCGGACTGTCTGCATACTTTGGTTCAGGCTTACTTACTACTGAAGTTGTTCCTTTCCTTGTACTCCCACTATTTACTGTGATGCGTATTATTACACTCCTTGGTCTTAATAGTTAATATCGTGGAAAACATCTTTGAAGTCTGTATTTGAGAGTCAAAGTAGAACAGAAAAAAACTTTTACCATCCGTATTTGAGAAACATAAGAATTGCTACATAATCTAGGATTTTTTACAAACTGAGGTCAATTCATTTGGGAGATAACCCAATTGGTTTTTTGATACTTATTTACAGTGCTCTTGGGGGAACAAACCCACACCACCAGGAACAGCTTCAAATCCACTTCCACTACCGGCAATTGCTTCCACTCCTGGCCTTTCAGCAACTGATCTTTTGGCTTATGAACGGCAACTAGCAATAACCAAGATGGGCGGTGTCCATGCAGCACTCATGCACCCTCAGGGGCATCATCCCCTGAAGCAGGCGCCCATGGGAATCGGTGCAGCCGCAGCTAGCCAGGCTTTATATGATGGTGGCTTCCAGAATATCGCTGCCCAGCAACTCATGTACTACCAG

mRNA sequence

CAGATTGAGCCAATCCCTAGTGGAAATCTACCTCCTGGTTTTGATGCAAGTACTTGCCGCAGTGTATATGTTGGAAACATCCATGCACAAGTAACAGAACCACTTCTTCAAGAGGTTTTTGGTAGTATTGGTCTCGTTGAAGGGTGTAAGCTTGTGAGGAAGGAGAAGTCATCCTATGGATTTGTCCACTACTTTGATCGAAGATCAGCTGCCCTTGCTATTTTGTCACTCAATGGGAGGCATTTGTTTGGGCAGCCTATCAAAGTTAACTGGGCATATGCTAGCAGTCAGAGGGAAGACACATCAGGTCATTTCAACATTTTTGTTGGTGATCTTAGCCCTGAGGTCACTGATGCTATGTTGTTTGCATGCTTTTCTGTTTACTCCAGTTGCTCAGATGCTAGGGTTATGTGGGATCAGAAGACTGGGCGATCAAGAGGGTTTGGGTTTGTTTCCTTCCGAAACCAGCAGGTTTTGAATTTCTTCTCAGTGCTTGCTAACTGTAAGTGGCTTGGGAGTAGACAGATACGTTGTAACTGGGCAACCAAAGGTGCTGGCGTGAATGAAGATAAACAGGGCTCAGATACCAAAAGCGTGGTAGAACTAACAAATTGCTCATCTGAAGATGGTAAAGAGTCTGTAAATAATGAGGCTCCCGAGAACAATCCTCAATATACTACTGTATATGTGGGTAATCTTGCTCCAGAGGTCACTCAACTTGATCTACATCACCATTTTCATTCTCTAGGTGCTGGGGTGATAGAGGAGGTCCGAATTCAGCGGGATAAAGGATTTGGTTTTGTGAGGTATAATACTCATGCTGAGGCAGCTCTGGCTATTCAGATGGGCAATACTCGGTCTTTTCTTTGTGGCAGACAAATAAAGTGCTCTTGGGGGAACAAACCCACACCACCAGGAACAGCTTCAAATCCACTTCCACTACCGGCAATTGCTTCCACTCCTGGCCTTTCAGCAACTGATCTTTTGGCTTATGAACGGCAACTAGCAATAACCAAGATGGGCGGTGTCCATGCAGCACTCATGCACCCTCAGGGGCATCATCCCCTGAAGCAGGCGCCCATGGGAATCGGTGCAGCCGCAGCTAGCCAGGCTTTATATGATGGTGGCTTCCAGAATATCGCTGCCCAGCAACTCATGTACTACCAG

Coding sequence (CDS)

CAGATTGAGCCAATCCCTAGTGGAAATCTACCTCCTGGTTTTGATGCAAGTACTTGCCGCAGTGTATATGTTGGAAACATCCATGCACAAGTAACAGAACCACTTCTTCAAGAGGTTTTTGGTAGTATTGGTCTCGTTGAAGGGTGTAAGCTTGTGAGGAAGGAGAAGTCATCCTATGGATTTGTCCACTACTTTGATCGAAGATCAGCTGCCCTTGCTATTTTGTCACTCAATGGGAGGCATTTGTTTGGGCAGCCTATCAAAGTTAACTGGGCATATGCTAGCAGTCAGAGGGAAGACACATCAGGTCATTTCAACATTTTTGTTGGTGATCTTAGCCCTGAGGTCACTGATGCTATGTTGTTTGCATGCTTTTCTGTTTACTCCAGTTGCTCAGATGCTAGGGTTATGTGGGATCAGAAGACTGGGCGATCAAGAGGGTTTGGGTTTGTTTCCTTCCGAAACCAGCAGGTTTTGAATTTCTTCTCAGTGCTTGCTAACTGTAAGTGGCTTGGGAGTAGACAGATACGTTGTAACTGGGCAACCAAAGGTGCTGGCGTGAATGAAGATAAACAGGGCTCAGATACCAAAAGCGTGGTAGAACTAACAAATTGCTCATCTGAAGATGGTAAAGAGTCTGTAAATAATGAGGCTCCCGAGAACAATCCTCAATATACTACTGTATATGTGGGTAATCTTGCTCCAGAGGTCACTCAACTTGATCTACATCACCATTTTCATTCTCTAGGTGCTGGGGTGATAGAGGAGGTCCGAATTCAGCGGGATAAAGGATTTGGTTTTGTGAGGTATAATACTCATGCTGAGGCAGCTCTGGCTATTCAGATGGGCAATACTCGGTCTTTTCTTTGTGGCAGACAAATAAAGTGCTCTTGGGGGAACAAACCCACACCACCAGGAACAGCTTCAAATCCACTTCCACTACCGGCAATTGCTTCCACTCCTGGCCTTTCAGCAACTGATCTTTTGGCTTATGAACGGCAACTAGCAATAACCAAGATGGGCGGTGTCCATGCAGCACTCATGCACCCTCAGGGGCATCATCCCCTGAAGCAGGCGCCCATGGGAATCGGTGCAGCCGCAGCTAGCCAGGCTTTATATGATGGTGGCTTCCAGAATATCGCTGCCCAGCAACTCATGTACTACCAG

Protein sequence

QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQVLNFFSVLANCKWLGSRQIRCNWATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQYTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGNKPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQAPMGIGAAAASQALYDGGFQNIAAQQLMYYQ

Homology

[Close]

BLAST of MS013242 vs. NCBI nr
Match: XP_022148191.1 (oligouridylate-binding protein 1B-like [Momordica charantia])

HSP 1 Score: 766.9 bits (1979), Expect = 8.2e-218
Identity = 377/389 (96.92%), Postives = 378/389 (97.17%), Query Frame = 0


Query: 1   QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 60
           QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG
Sbjct: 35  QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 94

Query: 61  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 120
           FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM
Sbjct: 95  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 154

Query: 121 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQVLNFFSVLANCKWLGSRQIRCNW 180
           LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQ           KWLGSRQIRCNW
Sbjct: 155 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCNW 214

Query: 181 ATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQYTTVYVGNLAPEVTQL 240
           ATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQ+TTVYVGNLAPEVTQL
Sbjct: 215 ATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQFTTVYVGNLAPEVTQL 274

Query: 241 DLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGN 300
           DLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGN
Sbjct: 275 DLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGN 334

Query: 301 KPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQAP 360
           KPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQAP
Sbjct: 335 KPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQAP 394

Query: 361 MGIGAAAASQALYDGGFQNIAAQQLMYYQ 390
           MGIGAAAASQALYDGGFQNIAAQQLMYYQ
Sbjct: 395 MGIGAAAASQALYDGGFQNIAAQQLMYYQ 423

[Close]

BLAST of MS013242 vs. NCBI nr
Match: XP_038896645.1 (oligouridylate-binding protein 1B-like isoform X1 [Benincasa hispida])

HSP 1 Score: 738.8 bits (1906), Expect = 2.4e-209
Identity = 365/390 (93.59%), Postives = 373/390 (95.64%), Query Frame = 0


Query: 1   QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 60
           QIEPIPSGNLPPGFDASTCRSVYVGNIH QVTEPLLQEVFGSIG VEGCKLVRKEKSSYG
Sbjct: 33  QIEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYG 92

Query: 61  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 120
           FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM
Sbjct: 93  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 152

Query: 121 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQ-VLNFFSVLANCKWLGSRQIRCN 180
           LFACFS YSSCSDARVMWDQKTGRSRGFGFVSFRNQQ   N  + L   KWLGSRQIRCN
Sbjct: 153 LFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTG-KWLGSRQIRCN 212

Query: 181 WATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQYTTVYVGNLAPEVTQ 240
           WA KGAGVNEDKQ SDTKSVVEL+N SSEDGKESVNNEAPENN QYTTVYVGNLAPEVTQ
Sbjct: 213 WAAKGAGVNEDKQSSDTKSVVELSNGSSEDGKESVNNEAPENNLQYTTVYVGNLAPEVTQ 272

Query: 241 LDLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG 300
           LDLH HFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG
Sbjct: 273 LDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG 332

Query: 301 NKPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQA 360
           +KPTPPGTASNPLPLPA+ASTPGLSATDLLAYERQLAI+KMGGVHAALMHPQGHHP+KQA
Sbjct: 333 SKPTPPGTASNPLPLPAVASTPGLSATDLLAYERQLAISKMGGVHAALMHPQGHHPMKQA 392

Query: 361 PMGIGAAAASQALYDGGFQNIAAQQLMYYQ 390
           PMG+GAAAASQALYDGGFQN+AAQQLMYYQ
Sbjct: 393 PMGMGAAAASQALYDGGFQNVAAQQLMYYQ 421

[Close]

BLAST of MS013242 vs. NCBI nr
Match: XP_008460320.1 (PREDICTED: oligouridylate-binding protein 1B-like [Cucumis melo])

HSP 1 Score: 734.9 bits (1896), Expect = 3.5e-208
Identity = 364/390 (93.33%), Postives = 372/390 (95.38%), Query Frame = 0


Query: 1   QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 60
           QIEPIPSGNLPPGFDASTCRSVYVGNIH QVTEPLLQEVFGSIG VEGCKLVRKEKSSYG
Sbjct: 34  QIEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYG 93

Query: 61  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 120
           FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM
Sbjct: 94  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 153

Query: 121 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQ-VLNFFSVLANCKWLGSRQIRCN 180
           LFACFS YSSCSDARVMWDQKTGRSRGFGFVSFRNQQ   N  + L   KWLGSRQIRCN
Sbjct: 154 LFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTG-KWLGSRQIRCN 213

Query: 181 WATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQYTTVYVGNLAPEVTQ 240
           WA KGAGVNEDKQGSDTKSVVEL+N SSEDGKESVNN+APENN QYTTVYVGNLAPEV+Q
Sbjct: 214 WAAKGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQ 273

Query: 241 LDLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG 300
           LDLH HFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG
Sbjct: 274 LDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG 333

Query: 301 NKPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQA 360
           +KPTPPGT SNPLPLPA+ASTPGLSATDLLAYERQLAITKMGGVHAALMHPQG HP+KQA
Sbjct: 334 SKPTPPGTTSNPLPLPAVASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGPHPMKQA 393

Query: 361 PMGIGAAAASQALYDGGFQNIAAQQLMYYQ 390
           PMG+GAAAASQALYDGGFQNIAAQQLMYYQ
Sbjct: 394 PMGMGAAAASQALYDGGFQNIAAQQLMYYQ 422

[Close]

BLAST of MS013242 vs. NCBI nr
Match: KAA0053515.1 (oligouridylate-binding protein 1B-like [Cucumis melo var. makuwa] >TYK19110.1 oligouridylate-binding protein 1B-like [Cucumis melo var. makuwa])

HSP 1 Score: 733.8 bits (1893), Expect = 7.7e-208
Identity = 363/390 (93.08%), Postives = 372/390 (95.38%), Query Frame = 0


Query: 1   QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 60
           +IEPIPSGNLPPGFDASTCRSVYVGNIH QVTEPLLQEVFGSIG VEGCKLVRKEKSSYG
Sbjct: 68  EIEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYG 127

Query: 61  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 120
           FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM
Sbjct: 128 FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 187

Query: 121 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQ-VLNFFSVLANCKWLGSRQIRCN 180
           LFACFS YSSCSDARVMWDQKTGRSRGFGFVSFRNQQ   N  + L   KWLGSRQIRCN
Sbjct: 188 LFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTG-KWLGSRQIRCN 247

Query: 181 WATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQYTTVYVGNLAPEVTQ 240
           WA KGAGVNEDKQGSDTKSVVEL+N SSEDGKESVNN+APENN QYTTVYVGNLAPEV+Q
Sbjct: 248 WAAKGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQ 307

Query: 241 LDLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG 300
           LDLH HFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG
Sbjct: 308 LDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG 367

Query: 301 NKPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQA 360
           +KPTPPGT SNPLPLPA+ASTPGLSATDLLAYERQLAITKMGGVHAALMHPQG HP+KQA
Sbjct: 368 SKPTPPGTTSNPLPLPAVASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGPHPMKQA 427

Query: 361 PMGIGAAAASQALYDGGFQNIAAQQLMYYQ 390
           PMG+GAAAASQALYDGGFQNIAAQQLMYYQ
Sbjct: 428 PMGMGAAAASQALYDGGFQNIAAQQLMYYQ 456

[Close]

BLAST of MS013242 vs. NCBI nr
Match: XP_004144435.1 (oligouridylate-binding protein 1B [Cucumis sativus] >KGN58457.1 hypothetical protein Csa_001287 [Cucumis sativus])

HSP 1 Score: 733.0 bits (1891), Expect = 1.3e-207
Identity = 363/390 (93.08%), Postives = 371/390 (95.13%), Query Frame = 0


Query: 1   QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 60
           QIEPIPSGNLPPGFDASTCRSVYVGNIH QVTEPLLQEVFGSIG VEGCKLVRKEKSSYG
Sbjct: 34  QIEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYG 93

Query: 61  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 120
           FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM
Sbjct: 94  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 153

Query: 121 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQ-VLNFFSVLANCKWLGSRQIRCN 180
           LFACFS YSSCSDARVMWDQKTGRSRGFGFVSFRNQQ   N  + L   KWLGSRQIRCN
Sbjct: 154 LFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTG-KWLGSRQIRCN 213

Query: 181 WATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQYTTVYVGNLAPEVTQ 240
           WA KGAGVNEDKQGSDTKSVVEL+N SSEDGKESVNN+APENN QYTTVYVGNLAPEV+Q
Sbjct: 214 WAAKGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQ 273

Query: 241 LDLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG 300
           LDLH HFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG
Sbjct: 274 LDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG 333

Query: 301 NKPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQA 360
           +KPTPPGT SNPLPLPA+ASTPGLSA DLLAYERQLAITKMGGVHAALMHPQG HP+KQA
Sbjct: 334 SKPTPPGTTSNPLPLPAVASTPGLSAADLLAYERQLAITKMGGVHAALMHPQGPHPMKQA 393

Query: 361 PMGIGAAAASQALYDGGFQNIAAQQLMYYQ 390
           PMG+GAAAASQALYDGGFQNIAAQQLMYYQ
Sbjct: 394 PMGMGAAAASQALYDGGFQNIAAQQLMYYQ 422

[Close]

BLAST of MS013242 vs. ExPASy Swiss-Prot
Match: Q9LQI9 (Oligouridylate-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=UBP1B PE=1 SV=1)

HSP 1 Score: 627.1 bits (1616), Expect = 1.3e-178
Identity = 310/389 (79.69%), Postives = 333/389 (85.60%), Query Frame = 0


Query: 1   QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 60
           QIEPIPSGNLPPGFD STCRSVYVGNIH QVTEPLLQEVF   G VE CKL+RKEKSSYG
Sbjct: 35  QIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYG 94

Query: 61  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 120
           FVHYFDRRSA LAILSLNGRHLFGQPIKVNWAYAS QREDTS HFNIFVGDLSPEVTDAM
Sbjct: 95  FVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYASGQREDTSSHFNIFVGDLSPEVTDAM 154

Query: 121 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQVLNFFSVLANCKWLGSRQIRCNW 180
           LF CFSVY +CSDARVMWDQKTGRSRGFGFVSFRNQQ           KWLGSRQIRCNW
Sbjct: 155 LFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNW 214

Query: 181 ATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQYTTVYVGNLAPEVTQL 240
           ATKGA   EDKQ SD+KSVVELT+  SEDGK++ N EAPENN QYTTVYVGNLAPEV+Q+
Sbjct: 215 ATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQV 274

Query: 241 DLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGN 300
           DLH HFHSLGAGVIEEVR+QRDKGFGFVRY+TH EAALAIQMGNT S+L GRQ+KCSWG+
Sbjct: 275 DLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGS 334

Query: 301 KPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQAP 360
           KPTP GTASNPLP PA A  PG SA+DLLAYERQLA++KM G++  + HPQG H  KQA 
Sbjct: 335 KPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMMHHPQGQHAFKQAA 394

Query: 361 MGIGAAAASQALYDGGFQNIAAQQLMYYQ 390
           M  GA  ++QA+YDGG+QN  AQQLMYYQ
Sbjct: 395 M--GATGSNQAIYDGGYQN--AQQLMYYQ 419

[Close]

BLAST of MS013242 vs. ExPASy Swiss-Prot
Match: Q9LJH8 (Oligouridylate-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=UBP1C PE=1 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 6.2e-176
Identity = 310/390 (79.49%), Postives = 334/390 (85.64%), Query Frame = 0


Query: 1   QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 60
           Q+EP+PSGNLPPGFD STCRSVYVGNIH QVTEPLLQE+F S G VE  KL+RK+KSSYG
Sbjct: 40  QLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKSSYG 99

Query: 61  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 120
           FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYA+ QREDTS HFNIFVGDLSPEVTDA 
Sbjct: 100 FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAT 159

Query: 121 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQVLNFFSVLANCKWLGSRQIRCNW 180
           L+  FSV+SSCSDARVMWDQKTGRSRGFGFVSFRNQQ         N KWL SRQIRCNW
Sbjct: 160 LYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNW 219

Query: 181 ATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQYTTVYVGNLAPEVTQL 240
           ATKGA   +DK  SD KSVVELT  SSEDGKE++N E PENN Q+TTVYVGNLAPEVTQL
Sbjct: 220 ATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEETPENNSQFTTVYVGNLAPEVTQL 279

Query: 241 DLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGN 300
           DLH +FH+LGAGVIEEVR+QRDKGFGFVRYNTH EAALAIQMGNT+ +L  RQIKCSWGN
Sbjct: 280 DLHRYFHALGAGVIEEVRVQRDKGFGFVRYNTHPEAALAIQMGNTQPYLFNRQIKCSWGN 339

Query: 301 KPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQAP 360
           KPTPPGTASNPLP PA A  PGLSA DLL YERQLA++KM  V+ ALMH QG HPL+QA 
Sbjct: 340 KPTPPGTASNPLPPPAPAPVPGLSAADLLNYERQLALSKMASVN-ALMHQQGQHPLRQA- 399

Query: 361 MGIGAAAASQALYDGGFQNI-AAQQLMYYQ 390
            GI AA A+ A+YDGGFQN+ AAQQLMYYQ
Sbjct: 400 HGINAAGATAAMYDGGFQNVAAAQQLMYYQ 427

[Close]

BLAST of MS013242 vs. ExPASy Swiss-Prot
Match: Q9SYG4 (Oligouridylate-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=UBP1A PE=1 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 6.9e-167
Identity = 288/391 (73.66%), Postives = 322/391 (82.35%), Query Frame = 0


Query: 1   QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 60
           Q+EP+PSGNLPPGFD +TCRSVY GNIH QVTE LLQE+F S G +E CKL+RK+KSSYG
Sbjct: 44  QMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYG 103

Query: 61  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 120
           FVHYFDRR A++AI++LNGRH+FGQP+KVNWAYA+ QREDTS HFNIFVGDLSPEVTDA 
Sbjct: 104 FVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAA 163

Query: 121 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQVLNFFSVLANCKWLGSRQIRCNW 180
           LF  FS ++SCSDARVMWDQKTGRSRGFGFVSFRNQQ         N KW+ SRQIRCNW
Sbjct: 164 LFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNW 223

Query: 181 ATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQYTTVYVGNLAPEVTQL 240
           ATKGA   EDK  SD KSVVELTN SSEDG+E  N +APENNPQ+TTVYVGNL+PEVTQL
Sbjct: 224 ATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNPQFTTVYVGNLSPEVTQL 283

Query: 241 DLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGN 300
           DLH  F++LGAGVIEEVR+QRDKGFGFVRYNTH EAALAIQMGN + FL  RQI+CSWGN
Sbjct: 284 DLHRLFYTLGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGN 343

Query: 301 KPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQAP 360
           KPTP GTASNPLP PA AS P LSA DLLAYERQLA+ K        MHPQ  H L+QA 
Sbjct: 344 KPTPSGTASNPLPPPAPASVPSLSAMDLLAYERQLALAK--------MHPQAQHSLRQAG 403

Query: 361 MGIGAAAASQALYDGGFQNIAA--QQLMYYQ 390
           +G+  A  + A+YDGG+QN+AA  QQLMYYQ
Sbjct: 404 LGVNVAGGTAAMYDGGYQNVAAAHQQLMYYQ 426

[Close]

BLAST of MS013242 vs. ExPASy Swiss-Prot
Match: Q9M427 (Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia OX=4092 GN=UBP1 PE=2 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 3.1e-159
Identity = 285/389 (73.26%), Postives = 316/389 (81.23%), Query Frame = 0


Query: 1   QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 60
           QIEPI SGNLPPGFD+STCRSVYVGNIH QVTEPLLQEVF S G +EGCKL+RK+KSSYG
Sbjct: 30  QIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFASTGPLEGCKLIRKDKSSYG 89

Query: 61  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 120
           FV YFDRRSAALAI++LNGRHLFGQPIKVNWAYAS+QREDTS H+NIFVGDLSPEVTDA 
Sbjct: 90  FVDYFDRRSAALAIVTLNGRHLFGQPIKVNWAYASAQREDTSNHYNIFVGDLSPEVTDAT 149

Query: 121 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQVLNFFSVLANCKWLGSRQIRCNW 180
           LFACFSVY+SCSDARVMWDQKTGRSRGFGFVSFRNQQ         N KWLGSRQIRCNW
Sbjct: 150 LFACFSVYTSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGKWLGSRQIRCNW 209

Query: 181 ATKGAGVNEDKQGSDTKSVVELTNCSSEDGKES-VNNEAPENNPQYTTVYVGNLAPEVTQ 240
           A KGAG    +Q SD KSVVELT+ +S+DG+E  VN +APENNPQYTTVYVGNLAPEVT 
Sbjct: 210 AAKGAGA-VGEQNSDAKSVVELTSGTSDDGQEKVVNEDAPENNPQYTTVYVGNLAPEVTS 269

Query: 241 LDLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG 300
           +DLH HFH+LGAGVIE+VRIQRDKGFGFVRY++HAEAA AIQ+GN R  L G+ +KCSWG
Sbjct: 270 VDLHRHFHALGAGVIEDVRIQRDKGFGFVRYSSHAEAARAIQLGNAR-LLFGKPVKCSWG 329

Query: 301 NKPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQA 360
           +KPTPPG++SNPLP PAI   PGLSA DL AY+RQLA+ KM G   A M PQG       
Sbjct: 330 SKPTPPGSSSNPLPPPAIGQIPGLSAMDLAAYQRQLALAKMAGAQ-AFMQPQGQR----- 389

Query: 361 PMGIGAAAASQALYDGGFQNIAAQQLMYY 389
                  A  Q +YDGG+  IA+ Q   Y
Sbjct: 390 -----IGAPGQGIYDGGYGGIASTQPPMY 405

[Close]

BLAST of MS013242 vs. ExPASy Swiss-Prot
Match: Q6YZW2 (RNA-binding protein 208 OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-208 PE=1 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 9.4e-132
Identity = 252/402 (62.69%), Postives = 293/402 (72.89%), Query Frame = 0


Query: 1   QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 60
           Q+EPI +GNLPPGFD STCRSVYVGN+H  VTE LL EVF S GLVE CKL+RKEKSS+G
Sbjct: 54  QMEPISNGNLPPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFG 113

Query: 61  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 120
           FV Y+DRRSAALAI++L+GRH+ GQ IKVNWAYAS+QREDTSGHF+IFVGDLS EV DA 
Sbjct: 114 FVDYYDRRSAALAIMTLHGRHICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDAT 173

Query: 121 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQVLNFFSVLANCKWLGSRQIRCNW 180
           L+ACFS Y SCSDARVMWD KTGRSRG+GFVSFRNQQ           KWLGSRQIRCNW
Sbjct: 174 LYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNW 233

Query: 181 ATKGAGVNEDKQGSDTKSVVELTNCSS-----EDGKESVNNEAPENNPQYTTVYVGNLAP 240
           ATK     E+KQ +D  + V LTN SS     E  +++ + E PENNP  TTVYVGNL  
Sbjct: 234 ATKNNA--EEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGH 293

Query: 241 EVTQLDLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIK 300
           EV + +LH HF++LG G IEEVR+Q+DKGFGFVRY+ H EAALAIQM N    + G+ IK
Sbjct: 294 EVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMAN-GLVVRGKPIK 353

Query: 301 CSWGNKPTPPGTASNPL--PLPAIASTP------GLSATDLLAYERQLAITKMGGVHAAL 360
           CSWGNKPTPPGT+S PL  PLP+    P      G SA D++AY+RQL ++++     A 
Sbjct: 354 CSWGNKPTPPGTSSKPLPPPLPSYQPVPMAGVPQGFSAADIVAYQRQLTLSQVAAGQIA- 413

Query: 361 MHPQGHHPLK-QAPMGIGAAAASQALYDGGFQNIAAQQLMYY 389
               G H L  Q   G+  AA SQALYDG     +AQQLMYY
Sbjct: 414 ----GQHGLAGQVSAGL-LAAGSQALYDGYPNQSSAQQLMYY 446

[Close]

BLAST of MS013242 vs. ExPASy TrEMBL
Match: A0A6J1D4M7 (oligouridylate-binding protein 1B-like OS=Momordica charantia OX=3673 GN=LOC111016923 PE=4 SV=1)

HSP 1 Score: 766.9 bits (1979), Expect = 4.0e-218
Identity = 377/389 (96.92%), Postives = 378/389 (97.17%), Query Frame = 0


Query: 1   QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 60
           QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG
Sbjct: 35  QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 94

Query: 61  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 120
           FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM
Sbjct: 95  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 154

Query: 121 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQVLNFFSVLANCKWLGSRQIRCNW 180
           LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQ           KWLGSRQIRCNW
Sbjct: 155 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCNW 214

Query: 181 ATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQYTTVYVGNLAPEVTQL 240
           ATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQ+TTVYVGNLAPEVTQL
Sbjct: 215 ATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQFTTVYVGNLAPEVTQL 274

Query: 241 DLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGN 300
           DLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGN
Sbjct: 275 DLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGN 334

Query: 301 KPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQAP 360
           KPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQAP
Sbjct: 335 KPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQAP 394

Query: 361 MGIGAAAASQALYDGGFQNIAAQQLMYYQ 390
           MGIGAAAASQALYDGGFQNIAAQQLMYYQ
Sbjct: 395 MGIGAAAASQALYDGGFQNIAAQQLMYYQ 423

[Close]

BLAST of MS013242 vs. ExPASy TrEMBL
Match: A0A1S3CDG5 (oligouridylate-binding protein 1B-like OS=Cucumis melo OX=3656 GN=LOC103499180 PE=4 SV=1)

HSP 1 Score: 734.9 bits (1896), Expect = 1.7e-208
Identity = 364/390 (93.33%), Postives = 372/390 (95.38%), Query Frame = 0


Query: 1   QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 60
           QIEPIPSGNLPPGFDASTCRSVYVGNIH QVTEPLLQEVFGSIG VEGCKLVRKEKSSYG
Sbjct: 34  QIEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYG 93

Query: 61  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 120
           FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM
Sbjct: 94  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 153

Query: 121 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQ-VLNFFSVLANCKWLGSRQIRCN 180
           LFACFS YSSCSDARVMWDQKTGRSRGFGFVSFRNQQ   N  + L   KWLGSRQIRCN
Sbjct: 154 LFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTG-KWLGSRQIRCN 213

Query: 181 WATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQYTTVYVGNLAPEVTQ 240
           WA KGAGVNEDKQGSDTKSVVEL+N SSEDGKESVNN+APENN QYTTVYVGNLAPEV+Q
Sbjct: 214 WAAKGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQ 273

Query: 241 LDLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG 300
           LDLH HFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG
Sbjct: 274 LDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG 333

Query: 301 NKPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQA 360
           +KPTPPGT SNPLPLPA+ASTPGLSATDLLAYERQLAITKMGGVHAALMHPQG HP+KQA
Sbjct: 334 SKPTPPGTTSNPLPLPAVASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGPHPMKQA 393

Query: 361 PMGIGAAAASQALYDGGFQNIAAQQLMYYQ 390
           PMG+GAAAASQALYDGGFQNIAAQQLMYYQ
Sbjct: 394 PMGMGAAAASQALYDGGFQNIAAQQLMYYQ 422

[Close]

BLAST of MS013242 vs. ExPASy TrEMBL
Match: A0A5A7UIJ8 (Oligouridylate-binding protein 1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00280 PE=4 SV=1)

HSP 1 Score: 733.8 bits (1893), Expect = 3.7e-208
Identity = 363/390 (93.08%), Postives = 372/390 (95.38%), Query Frame = 0


Query: 1   QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 60
           +IEPIPSGNLPPGFDASTCRSVYVGNIH QVTEPLLQEVFGSIG VEGCKLVRKEKSSYG
Sbjct: 68  EIEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYG 127

Query: 61  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 120
           FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM
Sbjct: 128 FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 187

Query: 121 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQ-VLNFFSVLANCKWLGSRQIRCN 180
           LFACFS YSSCSDARVMWDQKTGRSRGFGFVSFRNQQ   N  + L   KWLGSRQIRCN
Sbjct: 188 LFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTG-KWLGSRQIRCN 247

Query: 181 WATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQYTTVYVGNLAPEVTQ 240
           WA KGAGVNEDKQGSDTKSVVEL+N SSEDGKESVNN+APENN QYTTVYVGNLAPEV+Q
Sbjct: 248 WAAKGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQ 307

Query: 241 LDLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG 300
           LDLH HFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG
Sbjct: 308 LDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG 367

Query: 301 NKPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQA 360
           +KPTPPGT SNPLPLPA+ASTPGLSATDLLAYERQLAITKMGGVHAALMHPQG HP+KQA
Sbjct: 368 SKPTPPGTTSNPLPLPAVASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGPHPMKQA 427

Query: 361 PMGIGAAAASQALYDGGFQNIAAQQLMYYQ 390
           PMG+GAAAASQALYDGGFQNIAAQQLMYYQ
Sbjct: 428 PMGMGAAAASQALYDGGFQNIAAQQLMYYQ 456

[Close]

BLAST of MS013242 vs. ExPASy TrEMBL
Match: A0A0A0LCP1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G645950 PE=4 SV=1)

HSP 1 Score: 733.0 bits (1891), Expect = 6.4e-208
Identity = 363/390 (93.08%), Postives = 371/390 (95.13%), Query Frame = 0


Query: 1   QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 60
           QIEPIPSGNLPPGFDASTCRSVYVGNIH QVTEPLLQEVFGSIG VEGCKLVRKEKSSYG
Sbjct: 34  QIEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYG 93

Query: 61  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 120
           FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM
Sbjct: 94  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 153

Query: 121 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQ-VLNFFSVLANCKWLGSRQIRCN 180
           LFACFS YSSCSDARVMWDQKTGRSRGFGFVSFRNQQ   N  + L   KWLGSRQIRCN
Sbjct: 154 LFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTG-KWLGSRQIRCN 213

Query: 181 WATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQYTTVYVGNLAPEVTQ 240
           WA KGAGVNEDKQGSDTKSVVEL+N SSEDGKESVNN+APENN QYTTVYVGNLAPEV+Q
Sbjct: 214 WAAKGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQ 273

Query: 241 LDLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG 300
           LDLH HFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG
Sbjct: 274 LDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG 333

Query: 301 NKPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQA 360
           +KPTPPGT SNPLPLPA+ASTPGLSA DLLAYERQLAITKMGGVHAALMHPQG HP+KQA
Sbjct: 334 SKPTPPGTTSNPLPLPAVASTPGLSAADLLAYERQLAITKMGGVHAALMHPQGPHPMKQA 393

Query: 361 PMGIGAAAASQALYDGGFQNIAAQQLMYYQ 390
           PMG+GAAAASQALYDGGFQNIAAQQLMYYQ
Sbjct: 394 PMGMGAAAASQALYDGGFQNIAAQQLMYYQ 422

[Close]

BLAST of MS013242 vs. ExPASy TrEMBL
Match: A0A6J1IZV8 (oligouridylate-binding protein 1B-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479942 PE=4 SV=1)

HSP 1 Score: 726.9 bits (1875), Expect = 4.6e-206
Identity = 359/389 (92.29%), Postives = 370/389 (95.12%), Query Frame = 0


Query: 1   QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 60
           QIEPIPSGNLPPGFDASTCRSVYVGNIH QVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG
Sbjct: 33  QIEPIPSGNLPPGFDASTCRSVYVGNIHVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 92

Query: 61  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 120
           FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM
Sbjct: 93  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 152

Query: 121 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQVLNFFSVLANCKWLGSRQIRCNW 180
           LFACFS YSSCSDARVMWDQKTGRSRGFGFVSFRNQQ         + KWLGS+QIRCNW
Sbjct: 153 LFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLSGKWLGSKQIRCNW 212

Query: 181 ATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQYTTVYVGNLAPEVTQL 240
           A KGAGVNEDKQ SDTKSVVEL+N SSEDGKESVNNEAPENN QYTTVYVGNLAPEVTQL
Sbjct: 213 AAKGAGVNEDKQSSDTKSVVELSNGSSEDGKESVNNEAPENNLQYTTVYVGNLAPEVTQL 272

Query: 241 DLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGN 300
           DLH HFHSLGAGVIEEVR QRDKGFGFVRY+THAEAALAIQMGNTRSFLCGRQIKCSWG+
Sbjct: 273 DLHRHFHSLGAGVIEEVRTQRDKGFGFVRYSTHAEAALAIQMGNTRSFLCGRQIKCSWGS 332

Query: 301 KPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQAP 360
           KPTPPGTASNPLPLPA+ASTPGLSATDLLAYERQL+++KMGGVHAALMHPQG HPLKQAP
Sbjct: 333 KPTPPGTASNPLPLPAMASTPGLSATDLLAYERQLSLSKMGGVHAALMHPQG-HPLKQAP 392

Query: 361 MGIGAAAASQALYDGGFQNIAAQQLMYYQ 390
           MGIGAAAASQALYDGGFQNI++QQLMYYQ
Sbjct: 393 MGIGAAAASQALYDGGFQNISSQQLMYYQ 420

[Close]

BLAST of MS013242 vs. TAIR 10
Match: AT1G17370.1 (oligouridylate binding protein 1B )

HSP 1 Score: 627.1 bits (1616), Expect = 9.5e-180
Identity = 310/389 (79.69%), Postives = 333/389 (85.60%), Query Frame = 0


Query: 1   QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 60
           QIEPIPSGNLPPGFD STCRSVYVGNIH QVTEPLLQEVF   G VE CKL+RKEKSSYG
Sbjct: 35  QIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYG 94

Query: 61  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 120
           FVHYFDRRSA LAILSLNGRHLFGQPIKVNWAYAS QREDTS HFNIFVGDLSPEVTDAM
Sbjct: 95  FVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYASGQREDTSSHFNIFVGDLSPEVTDAM 154

Query: 121 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQVLNFFSVLANCKWLGSRQIRCNW 180
           LF CFSVY +CSDARVMWDQKTGRSRGFGFVSFRNQQ           KWLGSRQIRCNW
Sbjct: 155 LFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNW 214

Query: 181 ATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQYTTVYVGNLAPEVTQL 240
           ATKGA   EDKQ SD+KSVVELT+  SEDGK++ N EAPENN QYTTVYVGNLAPEV+Q+
Sbjct: 215 ATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQV 274

Query: 241 DLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGN 300
           DLH HFHSLGAGVIEEVR+QRDKGFGFVRY+TH EAALAIQMGNT S+L GRQ+KCSWG+
Sbjct: 275 DLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGS 334

Query: 301 KPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQAP 360
           KPTP GTASNPLP PA A  PG SA+DLLAYERQLA++KM G++  + HPQG H  KQA 
Sbjct: 335 KPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMMHHPQGQHAFKQAA 394

Query: 361 MGIGAAAASQALYDGGFQNIAAQQLMYYQ 390
           M  GA  ++QA+YDGG+QN  AQQLMYYQ
Sbjct: 395 M--GATGSNQAIYDGGYQN--AQQLMYYQ 419

[Close]

BLAST of MS013242 vs. TAIR 10
Match: AT1G17370.2 (oligouridylate binding protein 1B )

HSP 1 Score: 620.9 bits (1600), Expect = 6.8e-178
Identity = 309/389 (79.43%), Postives = 331/389 (85.09%), Query Frame = 0


Query: 1   QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 60
           QIEPIPSGNLPPGFD STCRSVYVGNIH QVTEPLLQEVF   G VE CKL+RKEKSSYG
Sbjct: 35  QIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYG 94

Query: 61  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 120
           FVHYFDRRSA LAILSLNGRHLFGQPIKVNWAYAS QREDTS HFNIFVGDLSPEVTDAM
Sbjct: 95  FVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYASGQREDTSSHFNIFVGDLSPEVTDAM 154

Query: 121 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQVLNFFSVLANCKWLGSRQIRCNW 180
           LF CFSVY +CSDARVMWDQKTGRSRGFGFVSFRNQQ           KWLGSRQIRCNW
Sbjct: 155 LFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNW 214

Query: 181 ATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQYTTVYVGNLAPEVTQL 240
           ATKGA   EDKQ SD+KSVVELT   S DGK++ N EAPENN QYTTVYVGNLAPEV+Q+
Sbjct: 215 ATKGATSGEDKQSSDSKSVVELT---SGDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQV 274

Query: 241 DLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGN 300
           DLH HFHSLGAGVIEEVR+QRDKGFGFVRY+TH EAALAIQMGNT S+L GRQ+KCSWG+
Sbjct: 275 DLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGS 334

Query: 301 KPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQAP 360
           KPTP GTASNPLP PA A  PG SA+DLLAYERQLA++KM G++  + HPQG H  KQA 
Sbjct: 335 KPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMMHHPQGQHAFKQAA 394

Query: 361 MGIGAAAASQALYDGGFQNIAAQQLMYYQ 390
           M  GA  ++QA+YDGG+QN  AQQLMYYQ
Sbjct: 395 M--GATGSNQAIYDGGYQN--AQQLMYYQ 416

[Close]

BLAST of MS013242 vs. TAIR 10
Match: AT3G14100.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 618.2 bits (1593), Expect = 4.4e-177
Identity = 310/390 (79.49%), Postives = 334/390 (85.64%), Query Frame = 0


Query: 1   QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 60
           Q+EP+PSGNLPPGFD STCRSVYVGNIH QVTEPLLQE+F S G VE  KL+RK+KSSYG
Sbjct: 40  QLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKSSYG 99

Query: 61  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 120
           FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYA+ QREDTS HFNIFVGDLSPEVTDA 
Sbjct: 100 FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAT 159

Query: 121 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQVLNFFSVLANCKWLGSRQIRCNW 180
           L+  FSV+SSCSDARVMWDQKTGRSRGFGFVSFRNQQ         N KWL SRQIRCNW
Sbjct: 160 LYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNW 219

Query: 181 ATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQYTTVYVGNLAPEVTQL 240
           ATKGA   +DK  SD KSVVELT  SSEDGKE++N E PENN Q+TTVYVGNLAPEVTQL
Sbjct: 220 ATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEETPENNSQFTTVYVGNLAPEVTQL 279

Query: 241 DLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGN 300
           DLH +FH+LGAGVIEEVR+QRDKGFGFVRYNTH EAALAIQMGNT+ +L  RQIKCSWGN
Sbjct: 280 DLHRYFHALGAGVIEEVRVQRDKGFGFVRYNTHPEAALAIQMGNTQPYLFNRQIKCSWGN 339

Query: 301 KPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQAP 360
           KPTPPGTASNPLP PA A  PGLSA DLL YERQLA++KM  V+ ALMH QG HPL+QA 
Sbjct: 340 KPTPPGTASNPLPPPAPAPVPGLSAADLLNYERQLALSKMASVN-ALMHQQGQHPLRQA- 399

Query: 361 MGIGAAAASQALYDGGFQNI-AAQQLMYYQ 390
            GI AA A+ A+YDGGFQN+ AAQQLMYYQ
Sbjct: 400 HGINAAGATAAMYDGGFQNVAAAQQLMYYQ 427

[Close]

BLAST of MS013242 vs. TAIR 10
Match: AT1G54080.1 (oligouridylate-binding protein 1A )

HSP 1 Score: 588.2 bits (1515), Expect = 4.9e-168
Identity = 288/391 (73.66%), Postives = 322/391 (82.35%), Query Frame = 0


Query: 1   QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 60
           Q+EP+PSGNLPPGFD +TCRSVY GNIH QVTE LLQE+F S G +E CKL+RK+KSSYG
Sbjct: 44  QMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYG 103

Query: 61  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 120
           FVHYFDRR A++AI++LNGRH+FGQP+KVNWAYA+ QREDTS HFNIFVGDLSPEVTDA 
Sbjct: 104 FVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAA 163

Query: 121 LFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRNQQVLNFFSVLANCKWLGSRQIRCNW 180
           LF  FS ++SCSDARVMWDQKTGRSRGFGFVSFRNQQ         N KW+ SRQIRCNW
Sbjct: 164 LFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNW 223

Query: 181 ATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQYTTVYVGNLAPEVTQL 240
           ATKGA   EDK  SD KSVVELTN SSEDG+E  N +APENNPQ+TTVYVGNL+PEVTQL
Sbjct: 224 ATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNPQFTTVYVGNLSPEVTQL 283

Query: 241 DLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGN 300
           DLH  F++LGAGVIEEVR+QRDKGFGFVRYNTH EAALAIQMGN + FL  RQI+CSWGN
Sbjct: 284 DLHRLFYTLGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGN 343

Query: 301 KPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPLKQAP 360
           KPTP GTASNPLP PA AS P LSA DLLAYERQLA+ K        MHPQ  H L+QA 
Sbjct: 344 KPTPSGTASNPLPPPAPASVPSLSAMDLLAYERQLALAK--------MHPQAQHSLRQAG 403

Query: 361 MGIGAAAASQALYDGGFQNIAA--QQLMYYQ 390
           +G+  A  + A+YDGG+QN+AA  QQLMYYQ
Sbjct: 404 LGVNVAGGTAAMYDGGYQNVAAAHQQLMYYQ 426

[Close]

BLAST of MS013242 vs. TAIR 10
Match: AT1G54080.2 (oligouridylate-binding protein 1A )

HSP 1 Score: 582.4 bits (1500), Expect = 2.7e-166
Identity = 288/395 (72.91%), Postives = 322/395 (81.52%), Query Frame = 0


Query: 1   QIEPIPSGNLPPGFDASTCRSVYVGNIHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYG 60
           Q+EP+PSGNLPPGFD +TCRSVY GNIH QVTE LLQE+F S G +E CKL+RK+KSSYG
Sbjct: 44  QMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSSYG 103

Query: 61  FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 120
           FVHYFDRR A++AI++LNGRH+FGQP+KVNWAYA+ QREDTS HFNIFVGDLSPEVTDA 
Sbjct: 104 FVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYATGQREDTSSHFNIFVGDLSPEVTDAA 163

Query: 121 LFACFSVYSSCS----DARVMWDQKTGRSRGFGFVSFRNQQVLNFFSVLANCKWLGSRQI 180
           LF  FS ++SCS    DARVMWDQKTGRSRGFGFVSFRNQQ         N KW+ SRQI
Sbjct: 164 LFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQI 223

Query: 181 RCNWATKGAGVNEDKQGSDTKSVVELTNCSSEDGKESVNNEAPENNPQYTTVYVGNLAPE 240
           RCNWATKGA   EDK  SD KSVVELTN SSEDG+E  N +APENNPQ+TTVYVGNL+PE
Sbjct: 224 RCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNPQFTTVYVGNLSPE 283

Query: 241 VTQLDLHHHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKC 300
           VTQLDLH  F++LGAGVIEEVR+QRDKGFGFVRYNTH EAALAIQMGN + FL  RQI+C
Sbjct: 284 VTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMGNAQPFLFSRQIRC 343

Query: 301 SWGNKPTPPGTASNPLPLPAIASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGHHPL 360
           SWGNKPTP GTASNPLP PA AS P LSA DLLAYERQLA+ K        MHPQ  H L
Sbjct: 344 SWGNKPTPSGTASNPLPPPAPASVPSLSAMDLLAYERQLALAK--------MHPQAQHSL 403

Query: 361 KQAPMGIGAAAASQALYDGGFQNIAA--QQLMYYQ 390
           +QA +G+  A  + A+YDGG+QN+AA  QQLMYYQ
Sbjct: 404 RQAGLGVNVAGGTAAMYDGGYQNVAAAHQQLMYYQ 430

The following BLAST results are available for this feature:

BLAST of MS013242 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148191.1	8.2e-218	96.92	oligouridylate-binding protein 1B-like [Momordica charantia]	[more]
XP_038896645.1	2.4e-209	93.59	oligouridylate-binding protein 1B-like isoform X1 [Benincasa hispida]	[more]
XP_008460320.1	3.5e-208	93.33	PREDICTED: oligouridylate-binding protein 1B-like [Cucumis melo]	[more]
KAA0053515.1	7.7e-208	93.08	oligouridylate-binding protein 1B-like [Cucumis melo var. makuwa] >TYK19110.1 ol...	[more]
XP_004144435.1	1.3e-207	93.08	oligouridylate-binding protein 1B [Cucumis sativus] >KGN58457.1 hypothetical pro...	[more]

BLAST of MS013242 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQI9	1.3e-178	79.69	Oligouridylate-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=UBP1B PE=1 ...	[more]
Q9LJH8	6.2e-176	79.49	Oligouridylate-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=UBP1C PE=1 ...	[more]
Q9SYG4	6.9e-167	73.66	Oligouridylate-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=UBP1A PE=1 ...	[more]
Q9M427	3.1e-159	73.26	Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia OX=4092 GN=UBP1 PE...	[more]
Q6YZW2	9.4e-132	62.69	RNA-binding protein 208 OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-208 PE=1...	[more]

BLAST of MS013242 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D4M7	4.0e-218	96.92	oligouridylate-binding protein 1B-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A1S3CDG5	1.7e-208	93.33	oligouridylate-binding protein 1B-like OS=Cucumis melo OX=3656 GN=LOC103499180 P...	[more]
A0A5A7UIJ8	3.7e-208	93.08	Oligouridylate-binding protein 1B-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0LCP1	6.4e-208	93.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G645950 PE=4 SV=1	[more]
A0A6J1IZV8	4.6e-206	92.29	oligouridylate-binding protein 1B-like isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of MS013242 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17370.1	9.5e-180	79.69	oligouridylate binding protein 1B	[more]
AT1G17370.2	6.8e-178	79.43	oligouridylate binding protein 1B	[more]
AT3G14100.1	4.4e-177	79.49	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G54080.1	4.9e-168	73.66	oligouridylate-binding protein 1A	[more]
AT1G54080.2	2.7e-166	72.91	oligouridylate-binding protein 1A	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 21..90 e-value: 3.9E-16 score: 69.6 coord: 227..297 e-value: 5.5E-16 score: 69.1 coord: 106..179 e-value: 6.4E-16 score: 68.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 228..294 e-value: 1.8E-11 score: 43.7 coord: 107..157 e-value: 1.1E-10 score: 41.2 coord: 22..88 e-value: 1.4E-12 score: 47.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 226..301 score: 14.794592
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 105..183 score: 12.79911
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 20..94 score: 14.811647
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 203..305 e-value: 2.4E-22 score: 81.0 coord: 14..97 e-value: 2.4E-19 score: 71.4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 98..198 e-value: 1.5E-18 score: 69.0
None	No IPR available	PANTHER	PTHR47640:SF34	OLIGOURIDYLATE-BINDING PROTEIN 1B-LIKE ISOFORM X1	coord: 1..389
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 1..389
None	No IPR available	CDD	cd12619	RRM2_PUB1	coord: 106..180 e-value: 8.42689E-42 score: 139.565
None	No IPR available	CDD	cd12354	RRM3_TIA1_like	coord: 226..301 e-value: 3.83864E-33 score: 116.951
None	No IPR available	CDD	cd12352	RRM1_TIA1_like	coord: 22..92 e-value: 1.93167E-34 score: 120.1
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 19..183
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 219..306

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013242.1	MS013242.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding