MS013235 (gene) Bitter gourd (TR) v1

Overview


Name	MS013235
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	LOB domain-containing protein
Location	scaffold459: 1445885 .. 1446879 (-)
RNA-Seq Expression	MS013235
Synteny	MS013235

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGATGAGTTGTAATGGTTGCAGAGTACTTCGCAAAGGTTGCAGCGAAAATTGCAGTATTCGCCCCTGTTTGCACTGGATTAAGAGCCCTGAATCTCAGGCCAACGCCACCGTTTTTCTCGCCAAGTTCTACGGCCGCGCCGGCCTTATGAACCTCATCAACGCCGGTCCTGACCATCTCCGCCCTGGTTAGTTTTAGTTTTACTCCGTTTTTCTTCTTCGTTTCTGTTTTGATATTTGTGCGTTTTTGTTGATTTTTTTTCAATTTTTTTTCCATTTCCAGCGATCTTTAGATCTCTGCTGTACGAGGCTTGCGGCCGGATTGTGAATCCGATTTACGGATCGGTAGGGTTGTTGTGGTCCGGGAGTTGGCAGCTCTGTCAGGCCGCCGTCGAGGCGGTGCTTAAAGGCGCTCCGATCACGCCGATCAACTCCGAAGCGGCGGCCACCGGCGATGGACCGCCGCTCAAGGCCTACGACATTCGTCACGTTTCCAAGGATGAGAACTCTGCCGCCTCCAACGACGGCGGAGTCCACCGCCGAGTCAAGACTCGGTGCCGGTTCAAGCGGTCGGTCGTCAAGCCGAAAGCGAGTAAAGGACTCGCCTCCGTCGTTGAGTCGACTCGGGGATTGTGCTCCACTGAGTTGAACCGGTCGTCGAGCGGCGAGTCGTCGCTGAGTCACCAATCCGACTCGCCGCACCTCGAGAACGATAGCAAAGAGACGGAGAGCATGATCTCGGTGGAGACGATTTCTCCTCCTCCGCCGTCGTCGGCGCTTTTCCGATCGGAGTCGACTTCGGTGCCGAAAACCACCGCCAACGGCGGAGCAACTGCAGAAAGTGAATTAGCTCTAGAGCTGACCCTGGGAATTGAGCCGGTGTCGCGTGCCCAGCACGTGATTCCAATGAAGAAGCGGAAGATAGAGGCCGACGGTGGGTTCAGGCCCAATAACGACGCGTGCAATACGGTTTTGGGCCTGGATTTTGCAGCC

mRNA sequence

ATGCGGATGAGTTGTAATGGTTGCAGAGTACTTCGCAAAGGTTGCAGCGAAAATTGCAGTATTCGCCCCTGTTTGCACTGGATTAAGAGCCCTGAATCTCAGGCCAACGCCACCGTTTTTCTCGCCAAGTTCTACGGCCGCGCCGGCCTTATGAACCTCATCAACGCCGGTCCTGACCATCTCCGCCCTGCGATCTTTAGATCTCTGCTGTACGAGGCTTGCGGCCGGATTGTGAATCCGATTTACGGATCGGTAGGGTTGTTGTGGTCCGGGAGTTGGCAGCTCTGTCAGGCCGCCGTCGAGGCGGTGCTTAAAGGCGCTCCGATCACGCCGATCAACTCCGAAGCGGCGGCCACCGGCGATGGACCGCCGCTCAAGGCCTACGACATTCGTCACGTTTCCAAGGATGAGAACTCTGCCGCCTCCAACGACGGCGGAGTCCACCGCCGAGTCAAGACTCGGTGCCGGTTCAAGCGGTCGGTCGTCAAGCCGAAAGCGAGTAAAGGACTCGCCTCCGTCGTTGAGTCGACTCGGGGATTGTGCTCCACTGAGTTGAACCGGTCGTCGAGCGGCGAGTCGTCGCTGAGTCACCAATCCGACTCGCCGCACCTCGAGAACGATAGCAAAGAGACGGAGAGCATGATCTCGGTGGAGACGATTTCTCCTCCTCCGCCGTCGTCGGCGCTTTTCCGATCGGAGTCGACTTCGGTGCCGAAAACCACCGCCAACGGCGGAGCAACTGCAGAAAGTGAATTAGCTCTAGAGCTGACCCTGGGAATTGAGCCGGTGTCGCGTGCCCAGCACGTGATTCCAATGAAGAAGCGGAAGATAGAGGCCGACGGTGGGTTCAGGCCCAATAACGACGCGTGCAATACGGTTTTGGGCCTGGATTTTGCAGCC

Coding sequence (CDS)

ATGCGGATGAGTTGTAATGGTTGCAGAGTACTTCGCAAAGGTTGCAGCGAAAATTGCAGTATTCGCCCCTGTTTGCACTGGATTAAGAGCCCTGAATCTCAGGCCAACGCCACCGTTTTTCTCGCCAAGTTCTACGGCCGCGCCGGCCTTATGAACCTCATCAACGCCGGTCCTGACCATCTCCGCCCTGCGATCTTTAGATCTCTGCTGTACGAGGCTTGCGGCCGGATTGTGAATCCGATTTACGGATCGGTAGGGTTGTTGTGGTCCGGGAGTTGGCAGCTCTGTCAGGCCGCCGTCGAGGCGGTGCTTAAAGGCGCTCCGATCACGCCGATCAACTCCGAAGCGGCGGCCACCGGCGATGGACCGCCGCTCAAGGCCTACGACATTCGTCACGTTTCCAAGGATGAGAACTCTGCCGCCTCCAACGACGGCGGAGTCCACCGCCGAGTCAAGACTCGGTGCCGGTTCAAGCGGTCGGTCGTCAAGCCGAAAGCGAGTAAAGGACTCGCCTCCGTCGTTGAGTCGACTCGGGGATTGTGCTCCACTGAGTTGAACCGGTCGTCGAGCGGCGAGTCGTCGCTGAGTCACCAATCCGACTCGCCGCACCTCGAGAACGATAGCAAAGAGACGGAGAGCATGATCTCGGTGGAGACGATTTCTCCTCCTCCGCCGTCGTCGGCGCTTTTCCGATCGGAGTCGACTTCGGTGCCGAAAACCACCGCCAACGGCGGAGCAACTGCAGAAAGTGAATTAGCTCTAGAGCTGACCCTGGGAATTGAGCCGGTGTCGCGTGCCCAGCACGTGATTCCAATGAAGAAGCGGAAGATAGAGGCCGACGGTGGGTTCAGGCCCAATAACGACGCGTGCAATACGGTTTTGGGCCTGGATTTTGCAGCC

Protein sequence

MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATGDGPPLKAYDIRHVSKDENSAASNDGGVHRRVKTRCRFKRSVVKPKASKGLASVVESTRGLCSTELNRSSSGESSLSHQSDSPHLENDSKETESMISVETISPPPPSSALFRSESTSVPKTTANGGATAESELALELTLGIEPVSRAQHVIPMKKRKIEADGGFRPNNDACNTVLGLDFAA

Homology

[Close]

BLAST of MS013235 vs. NCBI nr
Match: XP_022983660.1 (LOB domain-containing protein 41 [Cucurbita maxima])

HSP 1 Score: 515.8 bits (1327), Expect = 2.6e-142
Identity = 267/306 (87.25%), Postives = 279/306 (91.18%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSENCSIRPCLHWIKSP+SQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPDSQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120

Query: 121 DGPPLKAYDIRHVSKDENSAASNDGGVHRRVKTRCRFKRSVVKPKASKGLASVV-ESTRG 180
           DGPPLKAYDIRHVSKDENSAASNDGGV+RRVKTRCRFKRS VK KA KG++S V ESTR 
Sbjct: 121 DGPPLKAYDIRHVSKDENSAASNDGGVNRRVKTRCRFKRSAVKAKACKGISSTVEESTRR 180

Query: 181 LCSTELNRSSSGESSLSHQSDSPHLENDSKETESMISVET--ISPPPPSSALFRSESTSV 240
           LCS ELNRSSSGESSLSHQSDSPH+EN+SKETESMISV T   SPPP    LFRSESTSV
Sbjct: 181 LCSIELNRSSSGESSLSHQSDSPHVENESKETESMISVSTAEFSPPPVLPVLFRSESTSV 240

Query: 241 PKTTANGGATA---ESELALELTLGIEPVSRAQHVIPMKKRKIEADGGFRPNNDACNTVL 300
            K   +G  T    +SELALELTLG++PVSRA+HVIPMKKRKIEAD G RPNN+ACNTVL
Sbjct: 241 QKRLGHGDGTVPIPQSELALELTLGMKPVSRAEHVIPMKKRKIEADVGLRPNNEACNTVL 300

[Close]

BLAST of MS013235 vs. NCBI nr
Match: XP_022935456.1 (LOB domain-containing protein 41 [Cucurbita moschata])

HSP 1 Score: 515.8 bits (1327), Expect = 2.6e-142
Identity = 268/307 (87.30%), Postives = 281/307 (91.53%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSENCSIRPCLHWIKSP+SQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPDSQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120

Query: 121 DGPPLKAYDIRHVSKDENSAASNDGGVHRRVKTRCRFKRSVVKPKASKGLASVV-ESTRG 180
           DGPPLKAYDIRHVSKDENSAASNDGGV+RRVKTRCRFKRS VK KA KG++S V ESTR 
Sbjct: 121 DGPPLKAYDIRHVSKDENSAASNDGGVNRRVKTRCRFKRSAVKTKACKGISSTVDESTRR 180

Query: 181 LCSTELNRSSSGESSLSHQSDSPHLENDSKETESMISVET--ISPPPPSSALFRSESTSV 240
           LCS ELNRSSSGESSLSHQSDSPH+EN+SKET+SMISV T   SPPP    LFRSESTSV
Sbjct: 181 LCSIELNRSSSGESSLSHQSDSPHVENESKETDSMISVSTAKFSPPPVLPVLFRSESTSV 240

Query: 241 PKTTANGGATA---ESELALELTLGIEPVSRAQHVIPMKKRKIEADGGFRP-NNDACNTV 300
           PK   +GG T    +SELALELTLG++PVSRA+HVIPMKKRKIEAD G RP NN+ACNTV
Sbjct: 241 PKRPGHGGGTVPIPQSELALELTLGMKPVSRAEHVIPMKKRKIEADVGLRPNNNEACNTV 300

[Close]

BLAST of MS013235 vs. NCBI nr
Match: KAG6581178.1 (LOB domain-containing protein 41, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 514.6 bits (1324), Expect = 5.7e-142
Identity = 267/307 (86.97%), Postives = 281/307 (91.53%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSENCSIRPCLHWIKSP+SQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPDSQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120

Query: 121 DGPPLKAYDIRHVSKDENSAASNDGGVHRRVKTRCRFKRSVVKPKASKGLASVV-ESTRG 180
           DGPPLKAYDIRHVSKDENSAASNDGGV+RRVKTRCRFKRS VK KA KG++S V ESTR 
Sbjct: 121 DGPPLKAYDIRHVSKDENSAASNDGGVNRRVKTRCRFKRSAVKTKACKGISSTVDESTRR 180

Query: 181 LCSTELNRSSSGESSLSHQSDSPHLENDSKETESMISVET--ISPPPPSSALFRSESTSV 240
           LCS ELNRSSSGESSLSHQSDSPH+EN+SKET+S+ISV T   SPPP    LFRSESTSV
Sbjct: 181 LCSIELNRSSSGESSLSHQSDSPHVENESKETDSLISVSTAKFSPPPVLPVLFRSESTSV 240

Query: 241 PKTTANGGATA---ESELALELTLGIEPVSRAQHVIPMKKRKIEADGGFRP-NNDACNTV 300
           PK   +GG T    +SELALELTLG++PVSRA+HVIPMKKRKIEAD G RP NN+ACNTV
Sbjct: 241 PKRPGHGGGTVPIPQSELALELTLGMKPVSRAEHVIPMKKRKIEADVGLRPNNNEACNTV 300

[Close]

BLAST of MS013235 vs. NCBI nr
Match: KAG7017915.1 (LOB domain-containing protein 41 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 511.1 bits (1315), Expect = 6.3e-141
Identity = 267/307 (86.97%), Postives = 279/307 (90.88%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSENCSIRPCLHWIKSP+SQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPDSQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120

Query: 121 DGPPLKAYDIRHVSKDENSAASNDGGVHRRVKTRCRFKRSVVKPKASKGLASVV-ESTRG 180
           DGPPLKAYDIRHVSKDENSAASNDGGV+RRVKTRCRFKRS VK KA KG++S V ESTR 
Sbjct: 121 DGPPLKAYDIRHVSKDENSAASNDGGVNRRVKTRCRFKRSAVKTKACKGISSTVDESTRR 180

Query: 181 LCSTELNRSSSGESSLSHQSDSPHLENDSKETESMISVET--ISPPPPSSALFRSESTSV 240
           LCS ELNRSSSGESSLSHQSDS H+EN+SKET+SMISV T   SPPP    LFRSESTSV
Sbjct: 181 LCSIELNRSSSGESSLSHQSDSLHVENESKETDSMISVSTAKFSPPPVLPVLFRSESTSV 240

Query: 241 PKTTANGGATA---ESELALELTLGIEPVSRAQHVIPMKKRKIEADGGFRP-NNDACNTV 300
           PK   +GG T    +SELALELTLG++PVSRA HVIPMKKRKIEAD G RP NN+ACNTV
Sbjct: 241 PKRPGHGGGTVPIPQSELALELTLGMKPVSRADHVIPMKKRKIEADVGLRPNNNEACNTV 300

[Close]

BLAST of MS013235 vs. NCBI nr
Match: XP_023528698.1 (LOB domain-containing protein 41 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 507.7 bits (1306), Expect = 7.0e-140
Identity = 265/307 (86.32%), Postives = 278/307 (90.55%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSENCSIRPCLHWIKSP+SQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPDSQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120

Query: 121 DGPPLKAYDIRHVSKDENSAASNDGGVHRRVKTRCRFKRSVVKPKASKGLASVV-ESTRG 180
           DGPPLKAYDIRHVSKDENSAAS DGGV+RRVKTRCRFKRS VK KA KG++S V ESTR 
Sbjct: 121 DGPPLKAYDIRHVSKDENSAASIDGGVNRRVKTRCRFKRSAVKTKACKGISSTVDESTRR 180

Query: 181 LCSTELNRSSSGESSLSHQSDSPHLENDSKETESMISVET--ISPPPPSSALFRSESTSV 240
           LCS ELNRSSSGESSLSHQSDSPH+EN+SKET+SMISV T   SPPP    LFRSESTSV
Sbjct: 181 LCSIELNRSSSGESSLSHQSDSPHVENESKETDSMISVSTAEFSPPPVLPVLFRSESTSV 240

Query: 241 PKTTANGGATA---ESELALELTLGIEPVSRAQHVIPMKKRKIEADGGFRP-NNDACNTV 300
            K   +GG T    +SELALELTLG++PVSRA+HVIPMKKRKIE D G RP NN+ACNTV
Sbjct: 241 QKRPGHGGGTVPIPQSELALELTLGMKPVSRAEHVIPMKKRKIETDVGLRPNNNEACNTV 300

[Close]

BLAST of MS013235 vs. ExPASy Swiss-Prot
Match: Q9M886 (LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 6.0e-78
Identity = 169/299 (56.52%), Postives = 203/299 (67.89%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSE+CSIRPCL WIKSPE+QANATVFLAKFYGRAGLMNLINAGP+H
Sbjct: 1   MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120
           LRP IFRSLL+EACGRIVNPIYGSVGLLWSG+WQLCQ AVEAV+KG P+  I ++AA  G
Sbjct: 61  LRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIG 120

Query: 121 DGPPLKAYDIRHVSKDENSAASNDGGVHRRV-KTRCRFKRSVVKPKASKGLASVVESTRG 180
            GPPLK YDIRH+SKD+NSAA+  G    ++ KTR   + S V  +A             
Sbjct: 121 QGPPLKIYDIRHISKDDNSAAAATGSTDLKLAKTRRAKRVSTVAIQAE------------ 180

Query: 181 LCSTELNRSSSGESSLSHQSD--SPHLENDSKETESMISVETISPPPPSSALFRSESTSV 240
             S   +  +S +SSLSHQS+  + H E +SKE+ES +S E ++  PP+           
Sbjct: 181 --SEGKSDEASHDSSLSHQSEIVAAH-EGESKESESNVS-EVLAFSPPA----------- 240

Query: 241 PKTTANGGATAESELALELTLGIEPVSRAQHVIPMKKRKIEADGGFRPNNDACNTVLGL 297
                        E+ L+LTL +EPVSRA HV+P+KKR+I   G  +     C T L L
Sbjct: 241 --------VKGSGEIKLDLTLRLEPVSRAYHVVPVKKRRIGVFGTCQ-KESTCKTELML 263

[Close]

BLAST of MS013235 vs. ExPASy Swiss-Prot
Match: Q9ZW96 (LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 5.8e-73
Identity = 164/299 (54.85%), Postives = 184/299 (61.54%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSENCSIRPCL WIKS ESQANATVFLAKFYGRAGLMNL+N GPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSG+W LCQAAVEAV++G+P+TPI  +AA TG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTG 120

Query: 121 DGPPL--KAYDIRHVSKDENSAASNDGGVHRRVKTRCRFKRSVVKPKASKGLASVVESTR 180
             PP   K  DIRHVS       S D  V RR +  C+ +R+V                 
Sbjct: 121 QAPPFNNKLCDIRHVS-------SRDENVKRRSRGACKEERNV----------------- 180

Query: 181 GLCSTELNRSSSGESSLSHQSDSPHLENDSKETESMISVETISPPPPSSALFRSESTSVP 240
                   RS S ESSLSH+S                        P SS      +T  P
Sbjct: 181 --------RSLSHESSLSHES------------------------PVSS---EETTTEEP 229

Query: 241 KTTANGGATAESELALELTLGIEPVSRAQH-VIPMKKRKIEADGGFRPNNDACNTVLGL 297
           KT           + LELTLG+EP++R  H V+PMKKRK+E   G   + D C   LGL
Sbjct: 241 KTW----------IGLELTLGLEPLARGNHVVVPMKKRKLER-CGTSEDEDTCKIELGL 229

[Close]

BLAST of MS013235 vs. ExPASy Swiss-Prot
Match: Q9CA30 (LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 7.7e-57
Identity = 111/170 (65.29%), Postives = 133/170 (78.24%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MR+SCNGCRVLRKGC+++C+IRPCL WIKS +SQANAT+FLAKFYGRAGL+NLI +GPDH
Sbjct: 1   MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPI--TPINSEAAA 120
           LRPAIFRSLLYEACGRIVNP+ GSVGL+WSG+W  CQAAV+AVL G PI  TP+ S +A+
Sbjct: 61  LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

Query: 121 TGDGPPLKAYDIRHVSKDENSAASNDGGVHRRV-----KTRC-RFKRSVV 163
               PP + YDIRHV+KD  +   +   +  RV     KT+  RFKR  V
Sbjct: 121 HQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQTGRFKRESV 170

[Close]

BLAST of MS013235 vs. ExPASy Swiss-Prot
Match: Q9SN23 (LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.8e-43
Identity = 89/178 (50.00%), Postives = 115/178 (64.61%), Query Frame = 0


Query: 3   MSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDHLR 62
           MSCNGCRVLRKGCSENC +RPC+ WI+SPE+Q +ATVF+AKF+GRAGLM+ I+A P+   
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATGDG 122
           PA+F+SLLYEACGR VNP+ G+VGLLW+G+W +CQAAVE VL+G  + PI       G  
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFA 120

Query: 123 --PPLKAYDIRHVSKDENSAASNDGGVHRRVKTRCRF------KRSVVKPKASKGLAS 173
             P   + +   +  +  +    D    R +   CRF       RS   P   K L+S
Sbjct: 121 GFPSPTSDEASEICTEMLNLRKADDSGDRNIYHHCRFSSSRSRSRSTASPPKRKRLSS 178

[Close]

BLAST of MS013235 vs. ExPASy Swiss-Prot
Match: Q9FN11 (LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.8e-42
Identity = 73/110 (66.36%), Postives = 95/110 (86.36%), Query Frame = 0


Query: 3   MSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDHLR 62
           MSCNGCRVLRKGCSENC +RPC+ WI++ ++Q +ATVF+AKF+GRAGLM+ I+A PD  R
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPI 113
           PA+F+SLLYEACGR VNP+ G++G+LW+G+W +CQAAVE VL+G  + PI
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPI 110

[Close]

BLAST of MS013235 vs. ExPASy TrEMBL
Match: A0A6J1J6I5 (LOB domain-containing protein 41 OS=Cucurbita maxima OX=3661 GN=LOC111482207 PE=3 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.2e-142
Identity = 267/306 (87.25%), Postives = 279/306 (91.18%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSENCSIRPCLHWIKSP+SQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPDSQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120

Query: 121 DGPPLKAYDIRHVSKDENSAASNDGGVHRRVKTRCRFKRSVVKPKASKGLASVV-ESTRG 180
           DGPPLKAYDIRHVSKDENSAASNDGGV+RRVKTRCRFKRS VK KA KG++S V ESTR 
Sbjct: 121 DGPPLKAYDIRHVSKDENSAASNDGGVNRRVKTRCRFKRSAVKAKACKGISSTVEESTRR 180

Query: 181 LCSTELNRSSSGESSLSHQSDSPHLENDSKETESMISVET--ISPPPPSSALFRSESTSV 240
           LCS ELNRSSSGESSLSHQSDSPH+EN+SKETESMISV T   SPPP    LFRSESTSV
Sbjct: 181 LCSIELNRSSSGESSLSHQSDSPHVENESKETESMISVSTAEFSPPPVLPVLFRSESTSV 240

Query: 241 PKTTANGGATA---ESELALELTLGIEPVSRAQHVIPMKKRKIEADGGFRPNNDACNTVL 300
            K   +G  T    +SELALELTLG++PVSRA+HVIPMKKRKIEAD G RPNN+ACNTVL
Sbjct: 241 QKRLGHGDGTVPIPQSELALELTLGMKPVSRAEHVIPMKKRKIEADVGLRPNNEACNTVL 300

[Close]

BLAST of MS013235 vs. ExPASy TrEMBL
Match: A0A6J1F4Q5 (LOB domain-containing protein 41 OS=Cucurbita moschata OX=3662 GN=LOC111442325 PE=3 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.2e-142
Identity = 268/307 (87.30%), Postives = 281/307 (91.53%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSENCSIRPCLHWIKSP+SQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPDSQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120

Query: 121 DGPPLKAYDIRHVSKDENSAASNDGGVHRRVKTRCRFKRSVVKPKASKGLASVV-ESTRG 180
           DGPPLKAYDIRHVSKDENSAASNDGGV+RRVKTRCRFKRS VK KA KG++S V ESTR 
Sbjct: 121 DGPPLKAYDIRHVSKDENSAASNDGGVNRRVKTRCRFKRSAVKTKACKGISSTVDESTRR 180

Query: 181 LCSTELNRSSSGESSLSHQSDSPHLENDSKETESMISVET--ISPPPPSSALFRSESTSV 240
           LCS ELNRSSSGESSLSHQSDSPH+EN+SKET+SMISV T   SPPP    LFRSESTSV
Sbjct: 181 LCSIELNRSSSGESSLSHQSDSPHVENESKETDSMISVSTAKFSPPPVLPVLFRSESTSV 240

Query: 241 PKTTANGGATA---ESELALELTLGIEPVSRAQHVIPMKKRKIEADGGFRP-NNDACNTV 300
           PK   +GG T    +SELALELTLG++PVSRA+HVIPMKKRKIEAD G RP NN+ACNTV
Sbjct: 241 PKRPGHGGGTVPIPQSELALELTLGMKPVSRAEHVIPMKKRKIEADVGLRPNNNEACNTV 300

[Close]

BLAST of MS013235 vs. ExPASy TrEMBL
Match: A0A0A0LCG6 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G278920 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 3.3e-135
Identity = 261/310 (84.19%), Postives = 270/310 (87.10%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSENCSIRPCL WIKSPESQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAA TG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAATTG 120

Query: 121 DGPPLKAYDIRHVSKDENSAASNDGGVHRRVKTRCRFKRSVVKPKASKGLASVV--ESTR 180
           DGPPLKAYDIRHVSKDENS ASNDGG +R VKTRCRFKRS VK KASKG+AS V  ESTR
Sbjct: 121 DGPPLKAYDIRHVSKDENSVASNDGGANRPVKTRCRFKRSSVKAKASKGIASTVVDESTR 180

Query: 181 GLCSTELNRSSSGESSLSHQSDSPHLENDSKETESMISVET--ISPPPPSSALFRSEST- 240
            +CSTELNRSSSGESSLSHQSDS HLEN+SKETESMISVET  +SP P  S LFRSEST 
Sbjct: 181 PVCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPRPAQSVLFRSESTG 240

Query: 241 -----SVPKTTANGGATAESELALELTLGIEPVSRAQHVIPMKKRKIEADGGFRPNNDAC 300
                SVP           SELALELTLG+EPV RAQHVIPMKKRKIEA+ G RP ++ C
Sbjct: 241 GREGVSVP--------IPPSELALELTLGMEPVLRAQHVIPMKKRKIEAEVGLRPKSETC 300

[Close]

BLAST of MS013235 vs. ExPASy TrEMBL
Match: A0A1S3CEU1 (LOB domain-containing protein 41 OS=Cucumis melo OX=3656 GN=LOC103500157 PE=3 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 5.6e-135
Identity = 260/305 (85.25%), Postives = 266/305 (87.21%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSENCSIRPCL WIK+PESQANATVFLAKFYGRAGLMNLINAGPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKTPESQANATVFLAKFYGRAGLMNLINAGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSE AATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSETAATG 120

Query: 121 DGPPLKAYDIRHVSKDENSAASNDGGVHRRVKTRCRFKRSVVKPKASKGLASVV--ESTR 180
           DGPPLKAYDIRHVSKDENS ASNDGGV R VKTRCRFKRS  K KASKG+AS V  ESTR
Sbjct: 121 DGPPLKAYDIRHVSKDENSVASNDGGVIRPVKTRCRFKRSSAKAKASKGIASTVVDESTR 180

Query: 181 GLCSTELNRSSSGESSLSHQSDSPHLENDSKETESMISVET--ISPP-PPSSALFRSEST 240
            LCSTELNRSSSGESSLSHQSDS HLEN+SKETESMISVET  +SPP P  S LFRSEST
Sbjct: 181 PLCSTELNRSSSGESSLSHQSDSRHLENESKETESMISVETAEVSPPCPVQSVLFRSEST 240

Query: 241 SVPKTTANGGATAESELALELTLGIEPVSRAQHVIPMKKRKIEADGGFRPNNDACNTVLG 300
                         SELALELTLG+EPV RAQHVIPMKKRKIE D G RP N+ CNTVLG
Sbjct: 241 GRESVAV---PIPRSELALELTLGMEPVLRAQHVIPMKKRKIETDVGLRPKNETCNTVLG 300

[Close]

BLAST of MS013235 vs. ExPASy TrEMBL
Match: A0A6J1KC77 (LOB domain-containing protein 41-like OS=Cucurbita maxima OX=3661 GN=LOC111492566 PE=3 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 1.4e-133
Identity = 256/308 (83.12%), Postives = 272/308 (88.31%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSENCSIRPCL WIKSPESQANATVFLAKFYGRAGLMNLINAGP+H
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWS +W LCQAAVEAVLKGAPI PIN EAAATG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSSNWHLCQAAVEAVLKGAPIIPINFEAAATG 120

Query: 121 DGPPLKAYDIRHVSKDENSAASNDGGVHRRVKTRCRFKRSVVKPKASKGLAS-VVESTRG 180
           DGPPLKAYDIRH+SKDENSAASNDGG +RRV+TRCRFKRS VK K S G+ S V ESTR 
Sbjct: 121 DGPPLKAYDIRHISKDENSAASNDGGANRRVRTRCRFKRSAVKDKESTGIVSAVAESTRR 180

Query: 181 L-CSTELNRSSSGESSLSHQSDSPHLENDSKETESMISVET--ISPPPPSSALFRSESTS 240
           L  STE+NRSSSGESSLSHQSDSPHLE++SKETESMISVET  +SP  PSSA FRS S+ 
Sbjct: 181 LFTSTEINRSSSGESSLSHQSDSPHLEHESKETESMISVETADVSPLSPSSAFFRSGSSH 240

Query: 241 VPK--TTANGG--ATAESELALELTLGIEPVSRAQHVIPMKKRKIEADGGFRPNNDACNT 300
           V +  T  +GG     ESELALELTLG+EPVSRAQHV+PMKKRKIEADGG RPN + CNT
Sbjct: 241 VQRKFTNHDGGRMTIPESELALELTLGMEPVSRAQHVVPMKKRKIEADGGLRPNKETCNT 300

[Close]

BLAST of MS013235 vs. TAIR 10
Match: AT3G02550.1 (LOB domain-containing protein 41 )

HSP 1 Score: 292.4 bits (747), Expect = 4.3e-79
Identity = 169/299 (56.52%), Postives = 203/299 (67.89%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSE+CSIRPCL WIKSPE+QANATVFLAKFYGRAGLMNLINAGP+H
Sbjct: 1   MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120
           LRP IFRSLL+EACGRIVNPIYGSVGLLWSG+WQLCQ AVEAV+KG P+  I ++AA  G
Sbjct: 61  LRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIG 120

Query: 121 DGPPLKAYDIRHVSKDENSAASNDGGVHRRV-KTRCRFKRSVVKPKASKGLASVVESTRG 180
            GPPLK YDIRH+SKD+NSAA+  G    ++ KTR   + S V  +A             
Sbjct: 121 QGPPLKIYDIRHISKDDNSAAAATGSTDLKLAKTRRAKRVSTVAIQAE------------ 180

Query: 181 LCSTELNRSSSGESSLSHQSD--SPHLENDSKETESMISVETISPPPPSSALFRSESTSV 240
             S   +  +S +SSLSHQS+  + H E +SKE+ES +S E ++  PP+           
Sbjct: 181 --SEGKSDEASHDSSLSHQSEIVAAH-EGESKESESNVS-EVLAFSPPA----------- 240

Query: 241 PKTTANGGATAESELALELTLGIEPVSRAQHVIPMKKRKIEADGGFRPNNDACNTVLGL 297
                        E+ L+LTL +EPVSRA HV+P+KKR+I   G  +     C T L L
Sbjct: 241 --------VKGSGEIKLDLTLRLEPVSRAYHVVPVKKRRIGVFGTCQ-KESTCKTELML 263

[Close]

BLAST of MS013235 vs. TAIR 10
Match: AT1G67100.1 (LOB domain-containing protein 40 )

HSP 1 Score: 275.8 bits (704), Expect = 4.1e-74
Identity = 164/299 (54.85%), Postives = 184/299 (61.54%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MRMSCNGCRVLRKGCSENCSIRPCL WIKS ESQANATVFLAKFYGRAGLMNL+N GPDH
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATG 120
           LRPAIFRSLLYEACGRIVNPIYGSVGLLWSG+W LCQAAVEAV++G+P+TPI  +AA TG
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTG 120

Query: 121 DGPPL--KAYDIRHVSKDENSAASNDGGVHRRVKTRCRFKRSVVKPKASKGLASVVESTR 180
             PP   K  DIRHVS       S D  V RR +  C+ +R+V                 
Sbjct: 121 QAPPFNNKLCDIRHVS-------SRDENVKRRSRGACKEERNV----------------- 180

Query: 181 GLCSTELNRSSSGESSLSHQSDSPHLENDSKETESMISVETISPPPPSSALFRSESTSVP 240
                   RS S ESSLSH+S                        P SS      +T  P
Sbjct: 181 --------RSLSHESSLSHES------------------------PVSS---EETTTEEP 229

Query: 241 KTTANGGATAESELALELTLGIEPVSRAQH-VIPMKKRKIEADGGFRPNNDACNTVLGL 297
           KT           + LELTLG+EP++R  H V+PMKKRK+E   G   + D C   LGL
Sbjct: 241 KTW----------IGLELTLGLEPLARGNHVVVPMKKRKLER-CGTSEDEDTCKIELGL 229

[Close]

BLAST of MS013235 vs. TAIR 10
Match: AT1G68510.1 (LOB domain-containing protein 42 )

HSP 1 Score: 222.2 bits (565), Expect = 5.4e-58
Identity = 111/170 (65.29%), Postives = 133/170 (78.24%), Query Frame = 0


Query: 1   MRMSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDH 60
           MR+SCNGCRVLRKGC+++C+IRPCL WIKS +SQANAT+FLAKFYGRAGL+NLI +GPDH
Sbjct: 1   MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH 60

Query: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPI--TPINSEAAA 120
           LRPAIFRSLLYEACGRIVNP+ GSVGL+WSG+W  CQAAV+AVL G PI  TP+ S +A+
Sbjct: 61  LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

Query: 121 TGDGPPLKAYDIRHVSKDENSAASNDGGVHRRV-----KTRC-RFKRSVV 163
               PP + YDIRHV+KD  +   +   +  RV     KT+  RFKR  V
Sbjct: 121 HQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQTGRFKRESV 170

[Close]

BLAST of MS013235 vs. TAIR 10
Match: AT3G49940.1 (LOB domain-containing protein 38 )

HSP 1 Score: 177.2 bits (448), Expect = 2.0e-44
Identity = 89/178 (50.00%), Postives = 115/178 (64.61%), Query Frame = 0


Query: 3   MSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDHLR 62
           MSCNGCRVLRKGCSENC +RPC+ WI+SPE+Q +ATVF+AKF+GRAGLM+ I+A P+   
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPINSEAAATGDG 122
           PA+F+SLLYEACGR VNP+ G+VGLLW+G+W +CQAAVE VL+G  + PI       G  
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFA 120

Query: 123 --PPLKAYDIRHVSKDENSAASNDGGVHRRVKTRCRF------KRSVVKPKASKGLAS 173
             P   + +   +  +  +    D    R +   CRF       RS   P   K L+S
Sbjct: 121 GFPSPTSDEASEICTEMLNLRKADDSGDRNIYHHCRFSSSRSRSRSTASPPKRKRLSS 178

[Close]

BLAST of MS013235 vs. TAIR 10
Match: AT5G67420.1 (LOB domain-containing protein 37 )

HSP 1 Score: 174.5 bits (441), Expect = 1.3e-43
Identity = 73/110 (66.36%), Postives = 95/110 (86.36%), Query Frame = 0


Query: 3   MSCNGCRVLRKGCSENCSIRPCLHWIKSPESQANATVFLAKFYGRAGLMNLINAGPDHLR 62
           MSCNGCRVLRKGCSENC +RPC+ WI++ ++Q +ATVF+AKF+GRAGLM+ I+A PD  R
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 63  PAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPI 113
           PA+F+SLLYEACGR VNP+ G++G+LW+G+W +CQAAVE VL+G  + PI
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPI 110

The following BLAST results are available for this feature:

BLAST of MS013235 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022983660.1	2.6e-142	87.25	LOB domain-containing protein 41 [Cucurbita maxima]	[more]
XP_022935456.1	2.6e-142	87.30	LOB domain-containing protein 41 [Cucurbita moschata]	[more]
KAG6581178.1	5.7e-142	86.97	LOB domain-containing protein 41, partial [Cucurbita argyrosperma subsp. sororia...	[more]
KAG7017915.1	6.3e-141	86.97	LOB domain-containing protein 41 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023528698.1	7.0e-140	86.32	LOB domain-containing protein 41 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS013235 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M886	6.0e-78	56.52	LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 S...	[more]
Q9ZW96	5.8e-73	54.85	LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 S...	[more]
Q9CA30	7.7e-57	65.29	LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 S...	[more]
Q9SN23	2.8e-43	50.00	LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 S...	[more]
Q9FN11	1.8e-42	66.36	LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 S...	[more]

BLAST of MS013235 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J6I5	1.2e-142	87.25	LOB domain-containing protein 41 OS=Cucurbita maxima OX=3661 GN=LOC111482207 PE=...	[more]
A0A6J1F4Q5	1.2e-142	87.30	LOB domain-containing protein 41 OS=Cucurbita moschata OX=3662 GN=LOC111442325 P...	[more]
A0A0A0LCG6	3.3e-135	84.19	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G278920 PE=3 SV...	[more]
A0A1S3CEU1	5.6e-135	85.25	LOB domain-containing protein 41 OS=Cucumis melo OX=3656 GN=LOC103500157 PE=3 SV...	[more]
A0A6J1KC77	1.4e-133	83.12	LOB domain-containing protein 41-like OS=Cucurbita maxima OX=3661 GN=LOC11149256...	[more]

BLAST of MS013235 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02550.1	4.3e-79	56.52	LOB domain-containing protein 41	[more]
AT1G67100.1	4.1e-74	54.85	LOB domain-containing protein 40	[more]
AT1G68510.1	5.4e-58	65.29	LOB domain-containing protein 42	[more]
AT3G49940.1	2.0e-44	50.00	LOB domain-containing protein 38	[more]
AT5G67420.1	1.3e-43	66.36	LOB domain-containing protein 37	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017414	LOB domain-containing protein	PIRSF	PIRSF038155	AS2	coord: 1..292 e-value: 1.8E-95 score: 318.5
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 4..103 e-value: 1.8E-24 score: 86.2
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 3..109 score: 16.85104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..246
None	No IPR available	PANTHER	PTHR31304:SF9	LOB DOMAIN-CONTAINING PROTEIN 40	coord: 1..296
None	No IPR available	PANTHER	PTHR31304	LOB DOMAIN-CONTAINING PROTEIN 38	coord: 1..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013235.1	MS013235.1	mRNA