MS013207 (gene) Bitter gourd (TR) v1

Overview


Name	MS013207
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold459: 1199924 .. 1201075 (-)
RNA-Seq Expression	MS013207
Synteny	MS013207

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCATTTTATTGTTCAGCAGAACACCTTTATCTCATGTGAAGAGACAAGGGGCTTTGCCTCGATCTCTGATCTGAAGGACCCAGTTGTCTGTCCAAAGCCCAGGCGACTCGCGATTCTTGCCAACAATCATGTTAAGCAGCCCTTAAGATGGCACCAAACTGAGGTTTGTGATTCAAAAGCTGGGGCAGATCTCCTTGACATCATTTTAAAGAAGGCAAGTTCTTTCTCATTCCTCATATTGTTTTGGCCATTAGTTATAGAAACTGATAACTCTTTGACCTTATAGCCGAACATATATTAAAGGCTAAATATATGTTTTAGTCTAACATATTTTGGTGTTTCTTCAATTAGTATAACAAGTTTCAATTTAGTCCGTTGTTTTTTAACACATTTAAGTTGATGTGACTGATTATAATTTAGTGAGTTTAGAGATGAACTAAAAACTTCTTTCTTAGATGACCAATGCCATGTAAGCTTATCATCCACTAACTTTAACATTCATTGACCAAAGGGTGTAATTGAGAAATGTTAAAACATTAGGAACTAAATTGTAAAATATCCAAAAATTAAGGGCTAAAACATATATTTCTGAAATTGATTGTGTCTTGTCCATTTACTAAAAGCTTAGGAGAGATTTAAATTTGTCACAGCTTTTGATCGAAGTAAAAGCATCCTTTTTTGGTATTTCACATGTTTTCAGTTGCTTATAGAAAGTCTTTTGTGTTTCACTTCCTTCCAATTGTTTGTCTCTTGAAGGTTTGTTGTCTAGATCTCAGACTTTCTTTTTCGTACGTCTTTACAATATGATTGATTGTATCCTTGAATTATGCCATAGGGGTCGGAACAATCTAGCGGCCATGTAGCTTCGTCACCCCCATTTTATAGTGGGTCTCCGCCGAGCCGAGCTTCAAACCCATTAATCCAGGATGCCCGGTTCGGGGATGAGAAACTGAGTACTATGCCAGCATTGCCCCCGGCATATTCCCCGTCAGGTCTCTCATCCCCATCCTCGACATCATCATCATCAGCCCACAAGGGAGGAGGGTGTGCGAGGATGAAGTTCGGCCTAAAACCGGCTGCAGTTAGAGTAGAAGGATTCGATTGTCTTAGTAGGGACCGCCAGAATTCTAGGATCCCTGCAGTTGCT

mRNA sequence

ATGAATCATTTTATTGTTCAGCAGAACACCTTTATCTCATGTGAAGAGACAAGGGGCTTTGCCTCGATCTCTGATCTGAAGGACCCAGTTGTCTGTCCAAAGCCCAGGCGACTCGCGATTCTTGCCAACAATCATGTTAAGCAGCCCTTAAGATGGCACCAAACTGAGGTTTGTGATTCAAAAGCTGGGGCAGATCTCCTTGACATCATTTTAAAGAAGGCAAGTTCTTTCTCATTCCTCATATTGTTTTGGCCATTAGGGTCGGAACAATCTAGCGGCCATGTAGCTTCGTCACCCCCATTTTATAGTGGGTCTCCGCCGAGCCGAGCTTCAAACCCATTAATCCAGGATGCCCGGTTCGGGGATGAGAAACTGAGTACTATGCCAGCATTGCCCCCGGCATATTCCCCGTCAGGTCTCTCATCCCCATCCTCGACATCATCATCATCAGCCCACAAGGGAGGAGGGTGTGCGAGGATGAAGTTCGGCCTAAAACCGGCTGCAGTTAGAGTAGAAGGATTCGATTGTCTTAGTAGGGACCGCCAGAATTCTAGGATCCCTGCAGTTGCT

Coding sequence (CDS)

ATGAATCATTTTATTGTTCAGCAGAACACCTTTATCTCATGTGAAGAGACAAGGGGCTTTGCCTCGATCTCTGATCTGAAGGACCCAGTTGTCTGTCCAAAGCCCAGGCGACTCGCGATTCTTGCCAACAATCATGTTAAGCAGCCCTTAAGATGGCACCAAACTGAGGTTTGTGATTCAAAAGCTGGGGCAGATCTCCTTGACATCATTTTAAAGAAGGCAAGTTCTTTCTCATTCCTCATATTGTTTTGGCCATTAGGGTCGGAACAATCTAGCGGCCATGTAGCTTCGTCACCCCCATTTTATAGTGGGTCTCCGCCGAGCCGAGCTTCAAACCCATTAATCCAGGATGCCCGGTTCGGGGATGAGAAACTGAGTACTATGCCAGCATTGCCCCCGGCATATTCCCCGTCAGGTCTCTCATCCCCATCCTCGACATCATCATCATCAGCCCACAAGGGAGGAGGGTGTGCGAGGATGAAGTTCGGCCTAAAACCGGCTGCAGTTAGAGTAGAAGGATTCGATTGTCTTAGTAGGGACCGCCAGAATTCTAGGATCCCTGCAGTTGCT

Protein sequence

MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPPFYSGSPPSRASNPLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRDRQNSRIPAVA

Homology

[Close]

BLAST of MS013207 vs. NCBI nr
Match: XP_022148186.1 (uncharacterized protein LOC111016920 [Momordica charantia])

HSP 1 Score: 346.7 bits (888), Expect = 1.3e-91
Identity = 177/190 (93.16%), Postives = 177/190 (93.16%), Query Frame = 0


Query: 1   MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDS 60
           MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDS
Sbjct: 1   MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDS 60

Query: 61  KAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPPFYSGSPPSRASNPLIQDARF 120
           KAGADLLDIILKK             GSEQSSGHVASSPPFYSGSPPSRASNPLIQDARF
Sbjct: 61  KAGADLLDIILKK-------------GSEQSSGHVASSPPFYSGSPPSRASNPLIQDARF 120

Query: 121 GDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD 180
           GDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD
Sbjct: 121 GDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD 177

Query: 181 RQNSRIPAVA 191
           RQNSRIPAVA
Sbjct: 181 RQNSRIPAVA 177

[Close]

BLAST of MS013207 vs. NCBI nr
Match: KAA0063383.1 (uncharacterized protein E6C27_scaffold508G00110 [Cucumis melo var. makuwa] >TYK11645.1 uncharacterized protein E5676_scaffold828G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 323.9 bits (829), Expect = 9.0e-85
Identity = 169/190 (88.95%), Postives = 172/190 (90.53%), Query Frame = 0


Query: 1   MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDS 60
           MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNH+KQPLRWHQTEVCDS
Sbjct: 88  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQTEVCDS 147

Query: 61  KAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPPFYSGSPPSRASNPLIQDARF 120
           KAGADLLDIILKK             GSEQSS HVASSPPF+SGSPPSRASNPLIQDARF
Sbjct: 148 KAGADLLDIILKK-------------GSEQSSAHVASSPPFFSGSPPSRASNPLIQDARF 207

Query: 121 GDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD 180
           GDEKLS MPAL PAYSPSGLSSPS  S+SSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD
Sbjct: 208 GDEKLSPMPAL-PAYSPSGLSSPS--SASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD 261

Query: 181 RQNSRIPAVA 191
           RQNSRIPAVA
Sbjct: 268 RQNSRIPAVA 261

[Close]

BLAST of MS013207 vs. NCBI nr
Match: XP_011651371.1 (uncharacterized protein LOC101218020 [Cucumis sativus] >XP_031739033.1 uncharacterized protein LOC101218020 [Cucumis sativus] >KGN57754.1 hypothetical protein Csa_011219 [Cucumis sativus])

HSP 1 Score: 323.2 bits (827), Expect = 1.5e-84
Identity = 168/190 (88.42%), Postives = 172/190 (90.53%), Query Frame = 0


Query: 1   MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDS 60
           MNHFIVQQNTF+SCEETRGFASISDLKDPVVCPKPRRLAILANNH+KQPLRWHQTEVCDS
Sbjct: 1   MNHFIVQQNTFLSCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQTEVCDS 60

Query: 61  KAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPPFYSGSPPSRASNPLIQDARF 120
           KAGADLLDIILKK             GSEQSS HVASSPPF+SGSPPSRASNPLIQDARF
Sbjct: 61  KAGADLLDIILKK-------------GSEQSSAHVASSPPFFSGSPPSRASNPLIQDARF 120

Query: 121 GDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD 180
           GDEKLS MPAL PAYSPSGLSSPS  S+SSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD
Sbjct: 121 GDEKLSPMPAL-PAYSPSGLSSPS--SASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD 174

Query: 181 RQNSRIPAVA 191
           RQNSRIPAVA
Sbjct: 181 RQNSRIPAVA 174

[Close]

BLAST of MS013207 vs. NCBI nr
Match: XP_008461589.1 (PREDICTED: uncharacterized protein LOC103500158 [Cucumis melo])

HSP 1 Score: 322.4 bits (825), Expect = 2.6e-84
Identity = 168/190 (88.42%), Postives = 171/190 (90.00%), Query Frame = 0


Query: 1   MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDS 60
           MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNH+KQPLRWHQTEVCDS
Sbjct: 1   MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQTEVCDS 60

Query: 61  KAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPPFYSGSPPSRASNPLIQDARF 120
           KAGADLLDIILKK             GSEQSS HVASSPPF+SGSPPSRASNPLIQDARF
Sbjct: 61  KAGADLLDIILKK-------------GSEQSSAHVASSPPFFSGSPPSRASNPLIQDARF 120

Query: 121 GDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD 180
           GDEKLS MP L PAYSPSGLSSPS  S+SSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD
Sbjct: 121 GDEKLSPMPGL-PAYSPSGLSSPS--SASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD 174

Query: 181 RQNSRIPAVA 191
           RQNSRIPAVA
Sbjct: 181 RQNSRIPAVA 174

[Close]

BLAST of MS013207 vs. NCBI nr
Match: XP_038897455.1 (uncharacterized protein LOC120085511 [Benincasa hispida])

HSP 1 Score: 317.8 bits (813), Expect = 6.5e-83
Identity = 166/190 (87.37%), Postives = 169/190 (88.95%), Query Frame = 0


Query: 1   MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDS 60
           MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNH+KQPLRW Q EVCDS
Sbjct: 1   MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWQQAEVCDS 60

Query: 61  KAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPPFYSGSPPSRASNPLIQDARF 120
           KAGADLLDIILKK             GSEQ SGHVASSPPF+SGSPPSRASNPLIQDARF
Sbjct: 61  KAGADLLDIILKK-------------GSEQPSGHVASSPPFFSGSPPSRASNPLIQDARF 120

Query: 121 GDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD 180
           GDEKLS MPAL PAYSPSGLSSPS  S+SS HKGGGCARMKFGLKPAAVRVEGFDCLSRD
Sbjct: 121 GDEKLSPMPAL-PAYSPSGLSSPS--SASSTHKGGGCARMKFGLKPAAVRVEGFDCLSRD 174

Query: 181 RQNSRIPAVA 191
           RQNSRIPAVA
Sbjct: 181 RQNSRIPAVA 174

[Close]

BLAST of MS013207 vs. ExPASy TrEMBL
Match: A0A6J1D4M2 (uncharacterized protein LOC111016920 OS=Momordica charantia OX=3673 GN=LOC111016920 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 6.3e-92
Identity = 177/190 (93.16%), Postives = 177/190 (93.16%), Query Frame = 0


Query: 1   MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDS 60
           MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDS
Sbjct: 1   MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDS 60

Query: 61  KAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPPFYSGSPPSRASNPLIQDARF 120
           KAGADLLDIILKK             GSEQSSGHVASSPPFYSGSPPSRASNPLIQDARF
Sbjct: 61  KAGADLLDIILKK-------------GSEQSSGHVASSPPFYSGSPPSRASNPLIQDARF 120

Query: 121 GDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD 180
           GDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD
Sbjct: 121 GDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD 177

Query: 181 RQNSRIPAVA 191
           RQNSRIPAVA
Sbjct: 181 RQNSRIPAVA 177

[Close]

BLAST of MS013207 vs. ExPASy TrEMBL
Match: A0A5A7V5L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold828G00090 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.4e-85
Identity = 169/190 (88.95%), Postives = 172/190 (90.53%), Query Frame = 0


Query: 1   MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDS 60
           MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNH+KQPLRWHQTEVCDS
Sbjct: 88  MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQTEVCDS 147

Query: 61  KAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPPFYSGSPPSRASNPLIQDARF 120
           KAGADLLDIILKK             GSEQSS HVASSPPF+SGSPPSRASNPLIQDARF
Sbjct: 148 KAGADLLDIILKK-------------GSEQSSAHVASSPPFFSGSPPSRASNPLIQDARF 207

Query: 121 GDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD 180
           GDEKLS MPAL PAYSPSGLSSPS  S+SSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD
Sbjct: 208 GDEKLSPMPAL-PAYSPSGLSSPS--SASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD 261

Query: 181 RQNSRIPAVA 191
           RQNSRIPAVA
Sbjct: 268 RQNSRIPAVA 261

[Close]

BLAST of MS013207 vs. ExPASy TrEMBL
Match: A0A0A0L9U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G280930 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 7.4e-85
Identity = 168/190 (88.42%), Postives = 172/190 (90.53%), Query Frame = 0


Query: 1   MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDS 60
           MNHFIVQQNTF+SCEETRGFASISDLKDPVVCPKPRRLAILANNH+KQPLRWHQTEVCDS
Sbjct: 1   MNHFIVQQNTFLSCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQTEVCDS 60

Query: 61  KAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPPFYSGSPPSRASNPLIQDARF 120
           KAGADLLDIILKK             GSEQSS HVASSPPF+SGSPPSRASNPLIQDARF
Sbjct: 61  KAGADLLDIILKK-------------GSEQSSAHVASSPPFFSGSPPSRASNPLIQDARF 120

Query: 121 GDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD 180
           GDEKLS MPAL PAYSPSGLSSPS  S+SSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD
Sbjct: 121 GDEKLSPMPAL-PAYSPSGLSSPS--SASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD 174

Query: 181 RQNSRIPAVA 191
           RQNSRIPAVA
Sbjct: 181 RQNSRIPAVA 174

[Close]

BLAST of MS013207 vs. ExPASy TrEMBL
Match: A0A1S3CF27 (uncharacterized protein LOC103500158 OS=Cucumis melo OX=3656 GN=LOC103500158 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.3e-84
Identity = 168/190 (88.42%), Postives = 171/190 (90.00%), Query Frame = 0


Query: 1   MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDS 60
           MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNH+KQPLRWHQTEVCDS
Sbjct: 1   MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHIKQPLRWHQTEVCDS 60

Query: 61  KAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPPFYSGSPPSRASNPLIQDARF 120
           KAGADLLDIILKK             GSEQSS HVASSPPF+SGSPPSRASNPLIQDARF
Sbjct: 61  KAGADLLDIILKK-------------GSEQSSAHVASSPPFFSGSPPSRASNPLIQDARF 120

Query: 121 GDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD 180
           GDEKLS MP L PAYSPSGLSSPS  S+SSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD
Sbjct: 121 GDEKLSPMPGL-PAYSPSGLSSPS--SASSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD 174

Query: 181 RQNSRIPAVA 191
           RQNSRIPAVA
Sbjct: 181 RQNSRIPAVA 174

[Close]

BLAST of MS013207 vs. ExPASy TrEMBL
Match: A0A6J1F3X6 (uncharacterized protein LOC111442160 OS=Cucurbita moschata OX=3662 GN=LOC111442160 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 8.8e-78
Identity = 156/190 (82.11%), Postives = 165/190 (86.84%), Query Frame = 0


Query: 1   MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQTEVCDS 60
           MNH+IV+QNTFIS EET+GFASISDLKDP+VCPKPRRLAILANNH+KQPLRWHQTE CDS
Sbjct: 1   MNHYIVKQNTFISREETKGFASISDLKDPIVCPKPRRLAILANNHIKQPLRWHQTEFCDS 60

Query: 61  KAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPPFYSGSPPSRASNPLIQDARF 120
           KAGADLLDIILKK             GSEQSS HVASSPP++SGSPPSRASNPLIQD RF
Sbjct: 61  KAGADLLDIILKK-------------GSEQSSSHVASSPPYFSGSPPSRASNPLIQDVRF 120

Query: 121 GDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEGFDCLSRD 180
           GDE++S M AL PAYSPSGLSSPSS SS    KGGGCARMKFGLKPAAVRVEGFDCLSRD
Sbjct: 121 GDERVSPMAAL-PAYSPSGLSSPSSASS----KGGGCARMKFGLKPAAVRVEGFDCLSRD 172

Query: 181 RQNSRIPAVA 191
           RQNSRIPAVA
Sbjct: 181 RQNSRIPAVA 172

[Close]

BLAST of MS013207 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 179.9 bits (455), Expect = 2.0e-45
Identity = 110/198 (55.56%), Postives = 136/198 (68.69%), Query Frame = 0


Query: 1   MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRWHQT----E 60
           MNH  +QQN F+S EE  GF    D KD VVCPKPRR+ +LANN V +PLR H +    +
Sbjct: 67  MNHCNLQQNAFMSREEMMGF----DRKDLVVCPKPRRVGLLANN-VIRPLRLHMSQAAAD 126

Query: 61  VCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPPFYSGSPPSRASNPLIQ 120
           +CDSKAGA+LL+II +K  + +   L            ++SSPP++ GSPPSRA+NPL Q
Sbjct: 127 LCDSKAGAELLEIIRRKEDNGTIGQL------------LSSSPPYFPGSPPSRAANPLAQ 186

Query: 121 DARFGDEKLSTM----PALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVE 180
           DARF DEKL+ +    P L P YS +G  SPSS+SSSS+ +  GC RMKFGL   AVRVE
Sbjct: 187 DARFRDEKLNPISPNSPFLQP-YSATGFPSPSSSSSSSSSR--GCVRMKFGLNSPAVRVE 244

Query: 181 GFDCLSRDRQNSRIPAVA 191
           GFDCL+RDRQNS IPA+A
Sbjct: 247 GFDCLNRDRQNSSIPAMA 244

[Close]

BLAST of MS013207 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 162.5 bits (410), Expect = 3.2e-40
Identity = 103/197 (52.28%), Postives = 120/197 (60.91%), Query Frame = 0


Query: 1   MNHFIVQQNTFISCEETRGFASI-SDLKDPVVCPKPRRLAILANNHVKQPLRWH-----Q 60
           MNH  +QQN F+S EE+RGF  I S   D VVCPKPRR      N+V +P R H      
Sbjct: 1   MNHCSLQQNAFLSREESRGFVPIYSHPVDSVVCPKPRRA-----NNVIRPFRLHFSLSGA 60

Query: 61  TEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPPFYSGSPPSRASNPL 120
            +VCDSKAG DLLDI  +K S  S                   SPPF+ GSPPSRA+NPL
Sbjct: 61  DDVCDSKAGEDLLDIFRRKESVSS------------------RSPPFFLGSPPSRAANPL 120

Query: 121 IQDARFGDEKLSTM-PALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVEG 180
            QDARFGDEKL+T+ P+L P         PS++   S     GC RMKFG+KPA VRVEG
Sbjct: 121 AQDARFGDEKLNTVSPSLSPLL-------PSASRVKS-----GCGRMKFGVKPATVRVEG 162

Query: 181 FDCLSRDRQNSRIPAVA 191
           FDCL+RDR NS IPA+A
Sbjct: 181 FDCLNRDRPNSSIPAMA 162

[Close]

BLAST of MS013207 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-33
Identity = 95/198 (47.98%), Postives = 115/198 (58.08%), Query Frame = 0


Query: 1   MNHFIVQQNTFISCEETRGFASISDL---KDPVVCPKPRRLAILAN-NHVKQPLRW---H 60
           MNHF VQ N F +  + R  +S+S +   +  VVCPKPRR+ +  N +H  + LR    H
Sbjct: 1   MNHFAVQPNAFAAGGDLRS-SSVSVVERDQTTVVCPKPRRIGLRNNHHHPSRSLRCYFSH 60

Query: 61  QTEVCDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSP-PFYSGSPPSRASN 120
           Q E+C+SKA  D+LDIIL K             G+EQ +  V  SP PF  GSPPSR +N
Sbjct: 61  QLELCESKAETDILDIILTKDG----------YGAEQVNKQVIDSPSPFLCGSPPSRVAN 120

Query: 121 PLIQDARFGDEKLSTMPALPPAYSPSGLSSPSSTSSSSAHKGGGCARMKFGLKPAAVRVE 180
           PL QDARF DE +S    +PP     GL   SS SSSS  KGG   R  FG  P  VRVE
Sbjct: 121 PLTQDARFRDEIVSVSSVIPPQL---GLPPSSSPSSSSGRKGGCVVRGNFGNSP-KVRVE 180

Query: 181 GFDCLSRDRQNSRIPAVA 191
           GFDCL RD +N  IPA+A
Sbjct: 181 GFDCLDRDSRNCSIPALA 183

[Close]

BLAST of MS013207 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 115.2 bits (287), Expect = 5.9e-26
Identity = 81/193 (41.97%), Postives = 105/193 (54.40%), Query Frame = 0


Query: 1   MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRW---HQTEV 60
           MN   +QQN F   EE R  A++SD +D V+CPKPRR+  L N+H  + LRW   HQ E+
Sbjct: 2   MNSCGIQQNAF---EEMRRNAAVSDRRDAVICPKPRRVGAL-NHHSSRSLRWQLNHQMEL 61

Query: 61  CDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP-FYSGSPPSRASNPLIQ 120
           C+S +G+++LD IL K             G EQ       +PP F++GSPPSR SNPL +
Sbjct: 62  CESNSGSEILDFILTKGGGG---------GGEQDQTRTVMTPPLFFTGSPPSRVSNPLTK 121

Query: 121 DARFGDEKL---STMPALPPAYSPSGLSSPSSTSSSSAHKGGGC--ARMKFGLKPAAVRV 180
           D+ F +E L   S  P+ P A  P   SSP         + G C  A   FG  P  VRV
Sbjct: 122 DSLFREELLMVASPSPSTPRATKPQPPSSP---------RNGSCVMAATSFGNNP-VVRV 168

Query: 181 EGFDCLSRDRQNS 185
            GFDC   DR++S
Sbjct: 182 VGFDC---DRRSS 168

[Close]

BLAST of MS013207 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 115.2 bits (287), Expect = 5.9e-26
Identity = 81/193 (41.97%), Postives = 105/193 (54.40%), Query Frame = 0


Query: 1   MNHFIVQQNTFISCEETRGFASISDLKDPVVCPKPRRLAILANNHVKQPLRW---HQTEV 60
           MN   +QQN F   EE R  A++SD +D V+CPKPRR+  L N+H  + LRW   HQ E+
Sbjct: 2   MNSCGIQQNAF---EEMRRNAAVSDRRDAVICPKPRRVGAL-NHHSSRSLRWQLNHQMEL 61

Query: 61  CDSKAGADLLDIILKKASSFSFLILFWPLGSEQSSGHVASSPP-FYSGSPPSRASNPLIQ 120
           C+S +G+++LD IL K             G EQ       +PP F++GSPPSR SNPL +
Sbjct: 62  CESNSGSEILDFILTKGGGG---------GGEQDQTRTVMTPPLFFTGSPPSRVSNPLTK 121

Query: 121 DARFGDEKL---STMPALPPAYSPSGLSSPSSTSSSSAHKGGGC--ARMKFGLKPAAVRV 180
           D+ F +E L   S  P+ P A  P   SSP         + G C  A   FG  P  VRV
Sbjct: 122 DSLFREELLMVASPSPSTPRATKPQPPSSP---------RNGSCVMAATSFGNNP-VVRV 168

Query: 181 EGFDCLSRDRQNS 185
            GFDC   DR++S
Sbjct: 182 VGFDC---DRRSS 168

The following BLAST results are available for this feature:

BLAST of MS013207 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148186.1	1.3e-91	93.16	uncharacterized protein LOC111016920 [Momordica charantia]	[more]
KAA0063383.1	9.0e-85	88.95	uncharacterized protein E6C27_scaffold508G00110 [Cucumis melo var. makuwa] >TYK1...	[more]
XP_011651371.1	1.5e-84	88.42	uncharacterized protein LOC101218020 [Cucumis sativus] >XP_031739033.1 uncharact...	[more]
XP_008461589.1	2.6e-84	88.42	PREDICTED: uncharacterized protein LOC103500158 [Cucumis melo]	[more]
XP_038897455.1	6.5e-83	87.37	uncharacterized protein LOC120085511 [Benincasa hispida]	[more]

BLAST of MS013207 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS013207 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D4M2	6.3e-92	93.16	uncharacterized protein LOC111016920 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A5A7V5L2	4.4e-85	88.95	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0L9U7	7.4e-85	88.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G280930 PE=4 SV=1	[more]
A0A1S3CF27	1.3e-84	88.42	uncharacterized protein LOC103500158 OS=Cucumis melo OX=3656 GN=LOC103500158 PE=...	[more]
A0A6J1F3X6	8.8e-78	82.11	uncharacterized protein LOC111442160 OS=Cucurbita moschata OX=3662 GN=LOC1114421...	[more]

BLAST of MS013207 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16110.1	2.0e-45	55.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G02555.1	3.2e-40	52.28	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G68490.1	1.7e-33	47.98	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13390.1	5.9e-26	41.97	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13390.2	5.9e-26	41.97	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..154
None	No IPR available	PANTHER	PTHR33384	EXPRESSED PROTEIN	coord: 1..190
None	No IPR available	PANTHER	PTHR33384:SF30	BNAC02G06400D PROTEIN	coord: 1..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013207.1	MS013207.1	mRNA