MS013175 (gene) Bitter gourd (TR) v1

Overview


Name	MS013175
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	transcription factor bHLH87-like
Location	scaffold459: 936037 .. 937675 (-)
RNA-Seq Expression	MS013175
Synteny	MS013175

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGATTTGCTTTGGAATGGCTCATGGAGCGGCGGAGGAGACGATGACGGTTGTGAAGAAAACTTATTCATCTCGGACCCGAGTTGTTGTTCGAGTCCGCCATTAAAGGAGCTTCAAACAGTTGCAGAAATATTGGGGTTGCCGGAGATTAATACTTCGGCATCGGACATGGGTTCGATGGCGCTTCGGAAACCAGCCGGAGTGGTGGATCTCAAGCTTTTATGTGACCGGGGAAATTCCTGGCCGGCCGAAGCTAGCTCCGGTGGACTTTTGTTGGAAGCGCTTGAAAATGACAAAGGTTAGAATTTGTTGAACTCGTTCACATTTAATTCTTCTTATCCATTTTTTCAACGTCTTTGGGTTTGGACATCTTGCTTTAATTAAGAAGAAAACATATAGGGACACTTCAATTAAAAGAATCTTTTTTAATAATAATATAGATCAGCATTAAAAATATTGTAGTAATGGATTCAGCATTAAAAATATTGTAGTAATGGATTTTTCAATATTCAGGTTTAGGCAATGCAATGCTAGGCAACTTGAGTTAAACTCAATTGTTTACGACATATATCTTCAACTAAAATATCACAGGTTCGAATTCCTTTTCACCTTAATATGTACTACTTTTTTAGACTAAAAATAACGATTTCATGTATACCAATTATTTGACACCTCGGAGGTTAAACCTCCATACTTCTCAAATATTTAAATATAAAAAGTTATTTGTTATGAGATATTTTTTTTAATAAAAATGTTTAACGATCGTTATATTTATAAAAGTATATGAGAAGTAAACTATTATAAGAATTAAAATACAGATCCATCTTCGCACTTATTTTTAACCATCTTATATTATATATGTACTAAAAGAAAAAAAAAAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCATTTCATAAGACTTTTTTTTTTTACGTGGATATTATCTTTATTTTATTAAACAGAAAAGATAATAGATATTTATTGAAAACATAAATTTGTTACTCTAATCGACGTTAGTATTAGACTTATGTTACCATATATGGAATAACTTACAAAGGTATTGATATGTAGGAAGAACTGCACCAGAGAGTGGATCTTGGGACATTTTTGAGAACCCAAAACCAAAACAACAAAATCCCATCTCAGAGAAACAACCAAGCTCAGCCAATTACAATGGCTTCCAACAGCCATCAAATTCATCTCCATCCCCGTCTTCTTCGAACAACAACGACGTCGAGCCAGCTGGTCGAGAGGCAGGCATGGCACGGATGAAGGCAATGATGTATCATGCAGCAGCATTCAGACCGGTGAACTTAGGGTTGGAGACAGTGGAGAAGAAGAGGAGGAGGAACGTGAAAACGTCGAAGGAGCCGCAGACCGTGGCGGCGAGAAAACGGAGGGAGAAAATAAGCGAGAAAATTAGGGTTTTGCAGAGGTTGGTTCCGGGTGGGAGCAAGATGGACACTGCCTCCATGCTTGATGAGGCTGCAAGTTACCTCAAGTTCCTTAGGGAACAGATCAAAGCAATGGAAGACTTAAGCTACAAACTTGGCTCTCTTGATTGTCTCTCAAATTGCACTTCTTTTTCTTTCAACTCCACAAGTGCTTTTCCCACAAGTGCT

mRNA sequence

ATGGATGATTTGCTTTGGAATGGCTCATGGAGCGGCGGAGGAGACGATGACGGTTGTGAAGAAAACTTATTCATCTCGGACCCGAGTTGTTGTTCGAGTCCGCCATTAAAGGAGCTTCAAACAGTTGCAGAAATATTGGGGTTGCCGGAGATTAATACTTCGGCATCGGACATGGGTTCGATGGCGCTTCGGAAACCAGCCGGAGTGGTGGATCTCAAGCTTTTATGTGACCGGGGAAATTCCTGGCCGGCCGAAGCTAGCTCCGGTGGACTTTTGTTGGAAGCGCTTGAAAATGACAAAGGAAGAACTGCACCAGAGAGTGGATCTTGGGACATTTTTGAGAACCCAAAACCAAAACAACAAAATCCCATCTCAGAGAAACAACCAAGCTCAGCCAATTACAATGGCTTCCAACAGCCATCAAATTCATCTCCATCCCCGTCTTCTTCGAACAACAACGACGTCGAGCCAGCTGGTCGAGAGGCAGGCATGGCACGGATGAAGGCAATGATGTATCATGCAGCAGCATTCAGACCGGTGAACTTAGGGTTGGAGACAGTGGAGAAGAAGAGGAGGAGGAACGTGAAAACGTCGAAGGAGCCGCAGACCGTGGCGGCGAGAAAACGGAGGGAGAAAATAAGCGAGAAAATTAGGGTTTTGCAGAGGTTGGTTCCGGGTGGGAGCAAGATGGACACTGCCTCCATGCTTGATGAGGCTGCAAGTTACCTCAAGTTCCTTAGGGAACAGATCAAAGCAATGGAAGACTTAAGCTACAAACTTGGCTCTCTTGATTGTCTCTCAAATTGCACTTCTTTTTCTTTCAACTCCACAAGTGCTTTTCCCACAAGTGCT

Coding sequence (CDS)

ATGGATGATTTGCTTTGGAATGGCTCATGGAGCGGCGGAGGAGACGATGACGGTTGTGAAGAAAACTTATTCATCTCGGACCCGAGTTGTTGTTCGAGTCCGCCATTAAAGGAGCTTCAAACAGTTGCAGAAATATTGGGGTTGCCGGAGATTAATACTTCGGCATCGGACATGGGTTCGATGGCGCTTCGGAAACCAGCCGGAGTGGTGGATCTCAAGCTTTTATGTGACCGGGGAAATTCCTGGCCGGCCGAAGCTAGCTCCGGTGGACTTTTGTTGGAAGCGCTTGAAAATGACAAAGGAAGAACTGCACCAGAGAGTGGATCTTGGGACATTTTTGAGAACCCAAAACCAAAACAACAAAATCCCATCTCAGAGAAACAACCAAGCTCAGCCAATTACAATGGCTTCCAACAGCCATCAAATTCATCTCCATCCCCGTCTTCTTCGAACAACAACGACGTCGAGCCAGCTGGTCGAGAGGCAGGCATGGCACGGATGAAGGCAATGATGTATCATGCAGCAGCATTCAGACCGGTGAACTTAGGGTTGGAGACAGTGGAGAAGAAGAGGAGGAGGAACGTGAAAACGTCGAAGGAGCCGCAGACCGTGGCGGCGAGAAAACGGAGGGAGAAAATAAGCGAGAAAATTAGGGTTTTGCAGAGGTTGGTTCCGGGTGGGAGCAAGATGGACACTGCCTCCATGCTTGATGAGGCTGCAAGTTACCTCAAGTTCCTTAGGGAACAGATCAAAGCAATGGAAGACTTAAGCTACAAACTTGGCTCTCTTGATTGTCTCTCAAATTGCACTTCTTTTTCTTTCAACTCCACAAGTGCTTTTCCCACAAGTGCT

Protein sequence

MDDLLWNGSWSGGGDDDGCEENLFISDPSCCSSPPLKELQTVAEILGLPEINTSASDMGSMALRKPAGVVDLKLLCDRGNSWPAEASSGGLLLEALENDKGRTAPESGSWDIFENPKPKQQNPISEKQPSSANYNGFQQPSNSSPSPSSSNNNDVEPAGREAGMARMKAMMYHAAAFRPVNLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAASYLKFLREQIKAMEDLSYKLGSLDCLSNCTSFSFNSTSAFPTSA

Homology

[Close]

BLAST of MS013175 vs. NCBI nr
Match: XP_022148257.1 (transcription factor bHLH87-like [Momordica charantia])

HSP 1 Score: 543.5 bits (1399), Expect = 1.1e-150
Identity = 280/284 (98.59%), Postives = 281/284 (98.94%), Query Frame = 0


Query: 1   MDDLLWNGSWSGGGDDDGCEENLFISDPSCCSSPPLKELQTVAEILGLPEINTSASDMGS 60
           MDDLLWNGSWSGGGDD GCEENLFISDPSCCSSPPLKELQTVAEILGLPEINTSASDMGS
Sbjct: 1   MDDLLWNGSWSGGGDDXGCEENLFISDPSCCSSPPLKELQTVAEILGLPEINTSASDMGS 60

Query: 61  MALRKPAGVVDLKLLCDRGNSWPAEASSGGLLLEALENDKGRTAPESGSWDIFENPKPKQ 120
           MALRKPAGVVDLKLLCDRGNSWPA ASSGGLLLE LENDKGRTAPESGSWDIFENPKPKQ
Sbjct: 61  MALRKPAGVVDLKLLCDRGNSWPAGASSGGLLLEELENDKGRTAPESGSWDIFENPKPKQ 120

Query: 121 QNPISEKQPSSANYNGFQQPSNSSPSPSSSNNNDVEPAGREAGMARMKAMMYHAAAFRPV 180
           QNPISEKQPSSANYNGFQQPSNSSPSPSSSNNNDVEPAGREAGMARMKAMMYHAAAFRPV
Sbjct: 121 QNPISEKQPSSANYNGFQQPSNSSPSPSSSNNNDVEPAGREAGMARMKAMMYHAAAFRPV 180

Query: 181 NLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAA 240
           NLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAA
Sbjct: 181 NLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAA 240

Query: 241 SYLKFLREQIKAMEDLSYKLGSLDCLSNCTSFSFNSTSAFPTSA 285
           SYLKFLREQ+KAMEDLSYKLGSLDCLSNCTSFSFNSTSAFPTSA
Sbjct: 241 SYLKFLREQVKAMEDLSYKLGSLDCLSNCTSFSFNSTSAFPTSA 284

[Close]

BLAST of MS013175 vs. NCBI nr
Match: XP_038902463.1 (transcription factor bHLH87-like [Benincasa hispida])

HSP 1 Score: 316.2 bits (809), Expect = 2.8e-82
Identity = 188/277 (67.87%), Postives = 214/277 (77.26%), Query Frame = 0


Query: 1   MDDLLWNGSWSGGGDDDGCEENLFIS-DPSCCSSPPLKELQTVAEILGLPEINTSASDMG 60
           MDDLLWNGSWS   +D  CEE+LF+S DPS CSSPPL+ELQTVA ILGL EINT A +M 
Sbjct: 1   MDDLLWNGSWS-IEEDRNCEESLFVSNDPSRCSSPPLQELQTVARILGLSEINTPAPEMK 60

Query: 61  SMALRKPAGVVDLKLLCDRGNSWPAEASSGGLLLEALENDKGRTAPESGSWDIFENPKPK 120
              L K     D K+L +R  SWP  ASSGG+L + +ENDKG +AP+ G  DIFEN KPK
Sbjct: 61  VEKLAK-----DSKVLFEREKSWPVGASSGGVLFDEVENDKG-SAPQGGFLDIFENQKPK 120

Query: 121 QQNPISEKQPSSANYNGFQQPSNSSPSPSSSNNNDVE-PAGREAGMARMKAMMYHAAAFR 180
           QQN I EKQPSSAN        + SPSPSSSNN++VE P  R+  +++MK  +Y+AA FR
Sbjct: 121 QQNSIIEKQPSSAN----SINPSLSPSPSSSNNDEVERPVDRDQLVSQMKECIYYAAVFR 180

Query: 181 PVNLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASMLDE 240
           PVNLG ETVEKKRRRNVK SKEPQT+AAR RREKISEKIRVLQ LVPGG+KMD ASMLDE
Sbjct: 181 PVNLGSETVEKKRRRNVKMSKEPQTIAARIRREKISEKIRVLQSLVPGGNKMDIASMLDE 240

Query: 241 AASYLKFLREQIKAMEDLSYKLGSLDCLSNCTSFSFN 276
           AASYLKFLR QIKA+E LSYKLGS+DCLS  TSF+ N
Sbjct: 241 AASYLKFLRAQIKALEGLSYKLGSIDCLSTSTSFNPN 266

[Close]

BLAST of MS013175 vs. NCBI nr
Match: XP_004146860.1 (transcription factor bHLH87 [Cucumis sativus] >KGN59848.1 hypothetical protein Csa_001182 [Cucumis sativus])

HSP 1 Score: 297.4 bits (760), Expect = 1.4e-76
Identity = 180/287 (62.72%), Postives = 210/287 (73.17%), Query Frame = 0


Query: 1   MDDLLWNGSWSGGGDDDGCEENLFIS-DPSCCSSPPLKELQTVAEILGLPEINTSASD-- 60
           MDDLLWN SWS   ++ G EE+LF+S DPS CSSPPL+ELQTVA ILGLPEI+TS  +  
Sbjct: 1   MDDLLWNSSWS-NEENSGSEESLFVSDDPSRCSSPPLQELQTVARILGLPEIDTSTRETR 60

Query: 61  MGSMALRKPAGVVDLKLLCDRGNSWPAEASSGGLLLEALENDKGRTAPESGSWDIFENPK 120
           +G +A        D K+L +   SWP E ++GG+L E LENDKG  A + G  DI EN K
Sbjct: 61  VGKLA-------EDSKVLFECEKSWPMEVTTGGVLFEVLENDKG-IASKGGFLDILENQK 120

Query: 121 PKQQNPISEKQPSSANYNGFQQPSNSSPSPSSSNNNDVEPA-GREAGMARMKAMMYHAAA 180
           P QQN I E QPSS N        + SPSPSSSN  ++E A  R+  +++MK  +Y+AA 
Sbjct: 121 PNQQNTIIENQPSSTN----STTLSPSPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAV 180

Query: 181 FRPVNLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASML 240
           FRPVNLGLETVEKKRR+NVK SKEPQTVAARKRREKISEKIRVLQRLVPGGSKMD  SML
Sbjct: 181 FRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIGSML 240

Query: 241 DEAASYLKFLREQIKAMEDLSYKLGSLDCLSNCTSFSFNSTSAFPTS 284
           DEAASYLKFLR QIKA+E L+YK GS+DCLS CT  +    S FPT+
Sbjct: 241 DEAASYLKFLRAQIKALEGLTYKFGSIDCLSTCTPLN----STFPTN 270

[Close]

BLAST of MS013175 vs. NCBI nr
Match: XP_008447580.1 (PREDICTED: transcription factor bHLH87-like [Cucumis melo] >KAA0061131.1 transcription factor bHLH87-like [Cucumis melo var. makuwa] >TYK03801.1 transcription factor bHLH87-like [Cucumis melo var. makuwa])

HSP 1 Score: 285.8 bits (730), Expect = 4.1e-73
Identity = 174/287 (60.63%), Postives = 207/287 (72.13%), Query Frame = 0


Query: 1   MDDLLWNGSWSGGGDDDGCEENLFISD-PSCCSSPPLKELQTVAEILGLPEINTSASDMG 60
           M+DLLWN SWS   +D G EE+LF+SD P  CSSPPL+ELQTVA ILGLPEI+T   ++ 
Sbjct: 1   MEDLLWNSSWS-NEEDSGSEESLFVSDVPGRCSSPPLQELQTVARILGLPEIDTRTPEIR 60

Query: 61  SMALRKPAGVVDLKLLCDRGNSWPAEASSGGLLLEALENDKGRTAPESGSWDIFENPKPK 120
              L K + V       +R  S P E ++GG+L E LEND+G  AP+ G  DIFEN K  
Sbjct: 61  VEKLAKDSNVF------EREKSCPVEVTTGGVLFEVLENDQG-IAPKGGFLDIFENQKLS 120

Query: 121 QQNPISEKQPSSANYNGFQQPSNSSPSPSSSNN--NDVEP-AGREAGMARMKAMMYHAAA 180
           QQNPI EK PSS N       +  SPSPSSS++   ++E    ++  +++MK  +Y+AA 
Sbjct: 121 QQNPIIEKLPSSTN------STTPSPSPSSSSSYIEEIEQVVDQDRFVSQMKQWIYYAAV 180

Query: 181 FRPVNLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASML 240
           F+PVNLGLETVEKKRRRNVK SKEPQTVAARKRREKISEKIRVL+RLVPGGSKMD ASML
Sbjct: 181 FKPVNLGLETVEKKRRRNVKVSKEPQTVAARKRREKISEKIRVLRRLVPGGSKMDIASML 240

Query: 241 DEAASYLKFLREQIKAMEDLSYKLGSLDCLSNCTSFSFNSTSAFPTS 284
           DEAASYLKFLR QIKA+E L+YK GS DCLS CT F+      FPT+
Sbjct: 241 DEAASYLKFLRAQIKALEGLNYKFGSTDCLSTCTPFN----PTFPTN 269

[Close]

BLAST of MS013175 vs. NCBI nr
Match: XP_022948912.1 (transcription factor bHLH87-like [Cucurbita moschata])

HSP 1 Score: 259.6 bits (662), Expect = 3.1e-65
Identity = 166/284 (58.45%), Postives = 180/284 (63.38%), Query Frame = 0


Query: 1   MDDLLWNGSWSGGGDDDGCEENLFISDPSCCSSPPLKELQTVAEILGLPEINTSASDMGS 60
           MDDLLWNGSW+ G DD G E  LF    S CSSPPL+ELQTVA ILGL EI T   +M +
Sbjct: 1   MDDLLWNGSWNNGEDDGGKESLLFSDGSSRCSSPPLQELQTVARILGLSEIETPTPEMRA 60

Query: 61  MALRKPAGVVDLKLLCDRGNSWPAEASSGGLLLEALENDKGRTAPESGSWDIFENPKPKQ 120
           + L      VD K       SWPA ASSGGLLLE LENDKG                   
Sbjct: 61  VEL-----AVDPK-------SWPAGASSGGLLLEELENDKG------------------- 120

Query: 121 QNPISEKQPSSANYNGFQQPSNSSPSPSSSNNNDVEPAGREAGMARMKAMMYHAAAFRPV 180
                                    SPSSSNN +   + R+  M+RMK M+YHAA FRPV
Sbjct: 121 ----------------------IGVSPSSSNNYETASSDRDQIMSRMKEMIYHAAVFRPV 180

Query: 181 NLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAA 240
           NLG+ETVEKKRRRNVK SKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAA
Sbjct: 181 NLGIETVEKKRRRNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAA 226

Query: 241 SYLKFLREQIKAMEDLSYKLGSLDCLSNCTSF---SFNSTSAFP 282
           SYLKFLR QIKA+E   YKLG     S+CTSF   SF S + FP
Sbjct: 241 SYLKFLRAQIKALEGNGYKLG-----SSCTSFNPTSFPSNAYFP 226

[Close]

BLAST of MS013175 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.7e-32
Identity = 90/171 (52.63%), Postives = 119/171 (69.59%), Query Frame = 0


Query: 112 IFENPKPKQQNPISEKQPSSANYNGFQQPSNSSPSPSSSNNNDVEPAGREAGMARMKAMM 171
           I++  + K + P +EK+   ++   FQ         S+  +++VEP      +A+MK M+
Sbjct: 200 IYDENQSKSKKPRTEKERGGSSNISFQH--------STCLSDNVEPDAE--AIAQMKEMI 259

Query: 172 YHAAAFRPVNLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMD 231
           Y AAAFRPVN GLE VEK +R+NVK S +PQTVAAR+RRE+ISEKIRVLQ LVPGG+KMD
Sbjct: 260 YRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMD 319

Query: 232 TASMLDEAASYLKFLREQIKAMEDLSYKLGSLDCLSNCTSFSFNST-SAFP 282
           TASMLDEAA+YLKFLR Q+KA+E+L  KL         T+ SF+S  ++FP
Sbjct: 320 TASMLDEAANYLKFLRAQVKALENLRPKLDQ-------TNLSFSSAPTSFP 353

[Close]

BLAST of MS013175 vs. ExPASy Swiss-Prot
Match: A0A0P0WQ90 (Transcription factor LATE FLOWERING OS=Oryza sativa subsp. japonica OX=39947 GN=LF PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.0e-23
Identity = 68/138 (49.28%), Postives = 89/138 (64.49%), Query Frame = 0


Query: 164 MARMKAMMYHAAAFRPVNLG------------LETVEKKRRRNVKTSKEPQTVAARKRRE 223
           +A++K M+Y AAA RPV LG                ++ RR+NV+ S +PQTVAAR RRE
Sbjct: 258 IAQVKEMIYRAAAMRPVTLGGPASASDPSSRPPPPPQRPRRKNVRISSDPQTVAARLRRE 317

Query: 224 KISEKIRVLQRLVPGGSKMDTASMLDEAASYLKFLREQIKAMEDL------------SYK 278
           ++SE++RVLQRLVPGGSKMDTA+MLDEAASYLKFL+ Q++A+E L             Y 
Sbjct: 318 RVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALETLGNGNGNGNLLHHGYY 377

[Close]

BLAST of MS013175 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.5e-22
Identity = 67/150 (44.67%), Postives = 97/150 (64.67%), Query Frame = 0


Query: 106 ESGSWDIFENPKPKQQNPISEKQPSSANYNGFQQPSNSSPSPSSSNNNDVEPAGREAGMA 165
           ES +   F NP      P  +  P       F+     +PSPSSS           A MA
Sbjct: 39  ESNTHPFFFNP-THSHLPFDQTMPHHQPGLNFRY----APSPSSSLPEKRGGCSDNANMA 98

Query: 166 RMKAMMYHAAAFRPVNLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVP 225
            M+ M++  A  +P+++  E+V+  +R+NV+ SK+PQ+VAAR RRE+ISE+IR+LQRLVP
Sbjct: 99  AMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVP 158

Query: 226 GGSKMDTASMLDEAASYLKFLREQIKAMED 256
           GG+KMDTASMLDEA  Y+KFL++Q++++E+
Sbjct: 159 GGTKMDTASMLDEAIHYVKFLKKQVQSLEE 183

[Close]

BLAST of MS013175 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.4e-22
Identity = 60/127 (47.24%), Postives = 90/127 (70.87%), Query Frame = 0


Query: 140 PSNSSPSPSSSN-----NNDVEPAGREAGMARMKAMMYHAAAFRPVNLGLETVEKKRRRN 199
           PS+ SP+ + S+      N+         MA M+ M++  A  +P+++  E V+  +RRN
Sbjct: 66  PSSISPNTAYSSVFLDKRNNSNNNNNGTNMAAMREMIFRIAVMQPIHIDPEAVKPPKRRN 125

Query: 200 VKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAASYLKFLREQIKAME 259
           V+ SK+PQ+VAAR RRE+ISE+IR+LQRLVPGG+KMDTASMLDEA  Y+KFL++Q++++E
Sbjct: 126 VRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 185

Query: 260 DLSYKLG 262
           + +   G
Sbjct: 186 EQAVVTG 192

[Close]

BLAST of MS013175 vs. ExPASy Swiss-Prot
Match: Q9LXD8 (Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.9e-21
Identity = 60/110 (54.55%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 146 SPSSSNNNDVEPAGREAGMARMKAMMYHAAAFRPVNLGLETVEKKRRRNVKTSKEPQTVA 205
           S    ++ D E    E G   MK MMY  AA + V++   TV+K +RRNV+ S +PQ+VA
Sbjct: 76  SGDQEDDEDEEEPLEELG--AMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVA 135

Query: 206 ARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAASYLKFLREQIKAMED 256
           AR RRE+ISE+IR+LQRLVPGG+KMDTASMLDEA  Y+KFL+ QI+ + +
Sbjct: 136 ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNN 183

[Close]

BLAST of MS013175 vs. ExPASy TrEMBL
Match: A0A6J1D4K8 (transcription factor bHLH87-like OS=Momordica charantia OX=3673 GN=LOC111016961 PE=4 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 5.2e-151
Identity = 280/284 (98.59%), Postives = 281/284 (98.94%), Query Frame = 0


Query: 1   MDDLLWNGSWSGGGDDDGCEENLFISDPSCCSSPPLKELQTVAEILGLPEINTSASDMGS 60
           MDDLLWNGSWSGGGDD GCEENLFISDPSCCSSPPLKELQTVAEILGLPEINTSASDMGS
Sbjct: 1   MDDLLWNGSWSGGGDDXGCEENLFISDPSCCSSPPLKELQTVAEILGLPEINTSASDMGS 60

Query: 61  MALRKPAGVVDLKLLCDRGNSWPAEASSGGLLLEALENDKGRTAPESGSWDIFENPKPKQ 120
           MALRKPAGVVDLKLLCDRGNSWPA ASSGGLLLE LENDKGRTAPESGSWDIFENPKPKQ
Sbjct: 61  MALRKPAGVVDLKLLCDRGNSWPAGASSGGLLLEELENDKGRTAPESGSWDIFENPKPKQ 120

Query: 121 QNPISEKQPSSANYNGFQQPSNSSPSPSSSNNNDVEPAGREAGMARMKAMMYHAAAFRPV 180
           QNPISEKQPSSANYNGFQQPSNSSPSPSSSNNNDVEPAGREAGMARMKAMMYHAAAFRPV
Sbjct: 121 QNPISEKQPSSANYNGFQQPSNSSPSPSSSNNNDVEPAGREAGMARMKAMMYHAAAFRPV 180

Query: 181 NLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAA 240
           NLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAA
Sbjct: 181 NLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAA 240

Query: 241 SYLKFLREQIKAMEDLSYKLGSLDCLSNCTSFSFNSTSAFPTSA 285
           SYLKFLREQ+KAMEDLSYKLGSLDCLSNCTSFSFNSTSAFPTSA
Sbjct: 241 SYLKFLREQVKAMEDLSYKLGSLDCLSNCTSFSFNSTSAFPTSA 284

[Close]

BLAST of MS013175 vs. ExPASy TrEMBL
Match: A0A0A0LDH7 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G850530 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 6.5e-77
Identity = 180/287 (62.72%), Postives = 210/287 (73.17%), Query Frame = 0


Query: 1   MDDLLWNGSWSGGGDDDGCEENLFIS-DPSCCSSPPLKELQTVAEILGLPEINTSASD-- 60
           MDDLLWN SWS   ++ G EE+LF+S DPS CSSPPL+ELQTVA ILGLPEI+TS  +  
Sbjct: 1   MDDLLWNSSWS-NEENSGSEESLFVSDDPSRCSSPPLQELQTVARILGLPEIDTSTRETR 60

Query: 61  MGSMALRKPAGVVDLKLLCDRGNSWPAEASSGGLLLEALENDKGRTAPESGSWDIFENPK 120
           +G +A        D K+L +   SWP E ++GG+L E LENDKG  A + G  DI EN K
Sbjct: 61  VGKLA-------EDSKVLFECEKSWPMEVTTGGVLFEVLENDKG-IASKGGFLDILENQK 120

Query: 121 PKQQNPISEKQPSSANYNGFQQPSNSSPSPSSSNNNDVEPA-GREAGMARMKAMMYHAAA 180
           P QQN I E QPSS N        + SPSPSSSN  ++E A  R+  +++MK  +Y+AA 
Sbjct: 121 PNQQNTIIENQPSSTN----STTLSPSPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAV 180

Query: 181 FRPVNLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASML 240
           FRPVNLGLETVEKKRR+NVK SKEPQTVAARKRREKISEKIRVLQRLVPGGSKMD  SML
Sbjct: 181 FRPVNLGLETVEKKRRKNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIGSML 240

Query: 241 DEAASYLKFLREQIKAMEDLSYKLGSLDCLSNCTSFSFNSTSAFPTS 284
           DEAASYLKFLR QIKA+E L+YK GS+DCLS CT  +    S FPT+
Sbjct: 241 DEAASYLKFLRAQIKALEGLTYKFGSIDCLSTCTPLN----STFPTN 270

[Close]

BLAST of MS013175 vs. ExPASy TrEMBL
Match: A0A5D3BVP3 (Transcription factor bHLH87-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001900 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 2.0e-73
Identity = 174/287 (60.63%), Postives = 207/287 (72.13%), Query Frame = 0


Query: 1   MDDLLWNGSWSGGGDDDGCEENLFISD-PSCCSSPPLKELQTVAEILGLPEINTSASDMG 60
           M+DLLWN SWS   +D G EE+LF+SD P  CSSPPL+ELQTVA ILGLPEI+T   ++ 
Sbjct: 1   MEDLLWNSSWS-NEEDSGSEESLFVSDVPGRCSSPPLQELQTVARILGLPEIDTRTPEIR 60

Query: 61  SMALRKPAGVVDLKLLCDRGNSWPAEASSGGLLLEALENDKGRTAPESGSWDIFENPKPK 120
              L K + V       +R  S P E ++GG+L E LEND+G  AP+ G  DIFEN K  
Sbjct: 61  VEKLAKDSNVF------EREKSCPVEVTTGGVLFEVLENDQG-IAPKGGFLDIFENQKLS 120

Query: 121 QQNPISEKQPSSANYNGFQQPSNSSPSPSSSNN--NDVEP-AGREAGMARMKAMMYHAAA 180
           QQNPI EK PSS N       +  SPSPSSS++   ++E    ++  +++MK  +Y+AA 
Sbjct: 121 QQNPIIEKLPSSTN------STTPSPSPSSSSSYIEEIEQVVDQDRFVSQMKQWIYYAAV 180

Query: 181 FRPVNLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASML 240
           F+PVNLGLETVEKKRRRNVK SKEPQTVAARKRREKISEKIRVL+RLVPGGSKMD ASML
Sbjct: 181 FKPVNLGLETVEKKRRRNVKVSKEPQTVAARKRREKISEKIRVLRRLVPGGSKMDIASML 240

Query: 241 DEAASYLKFLREQIKAMEDLSYKLGSLDCLSNCTSFSFNSTSAFPTS 284
           DEAASYLKFLR QIKA+E L+YK GS DCLS CT F+      FPT+
Sbjct: 241 DEAASYLKFLRAQIKALEGLNYKFGSTDCLSTCTPFN----PTFPTN 269

[Close]

BLAST of MS013175 vs. ExPASy TrEMBL
Match: A0A1S3BIP2 (transcription factor bHLH87-like OS=Cucumis melo OX=3656 GN=LOC103489996 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 2.0e-73
Identity = 174/287 (60.63%), Postives = 207/287 (72.13%), Query Frame = 0


Query: 1   MDDLLWNGSWSGGGDDDGCEENLFISD-PSCCSSPPLKELQTVAEILGLPEINTSASDMG 60
           M+DLLWN SWS   +D G EE+LF+SD P  CSSPPL+ELQTVA ILGLPEI+T   ++ 
Sbjct: 1   MEDLLWNSSWS-NEEDSGSEESLFVSDVPGRCSSPPLQELQTVARILGLPEIDTRTPEIR 60

Query: 61  SMALRKPAGVVDLKLLCDRGNSWPAEASSGGLLLEALENDKGRTAPESGSWDIFENPKPK 120
              L K + V       +R  S P E ++GG+L E LEND+G  AP+ G  DIFEN K  
Sbjct: 61  VEKLAKDSNVF------EREKSCPVEVTTGGVLFEVLENDQG-IAPKGGFLDIFENQKLS 120

Query: 121 QQNPISEKQPSSANYNGFQQPSNSSPSPSSSNN--NDVEP-AGREAGMARMKAMMYHAAA 180
           QQNPI EK PSS N       +  SPSPSSS++   ++E    ++  +++MK  +Y+AA 
Sbjct: 121 QQNPIIEKLPSSTN------STTPSPSPSSSSSYIEEIEQVVDQDRFVSQMKQWIYYAAV 180

Query: 181 FRPVNLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASML 240
           F+PVNLGLETVEKKRRRNVK SKEPQTVAARKRREKISEKIRVL+RLVPGGSKMD ASML
Sbjct: 181 FKPVNLGLETVEKKRRRNVKVSKEPQTVAARKRREKISEKIRVLRRLVPGGSKMDIASML 240

Query: 241 DEAASYLKFLREQIKAMEDLSYKLGSLDCLSNCTSFSFNSTSAFPTS 284
           DEAASYLKFLR QIKA+E L+YK GS DCLS CT F+      FPT+
Sbjct: 241 DEAASYLKFLRAQIKALEGLNYKFGSTDCLSTCTPFN----PTFPTN 269

[Close]

BLAST of MS013175 vs. ExPASy TrEMBL
Match: A0A6J1GAJ8 (transcription factor bHLH87-like OS=Cucurbita moschata OX=3662 GN=LOC111452426 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.5e-65
Identity = 166/284 (58.45%), Postives = 180/284 (63.38%), Query Frame = 0


Query: 1   MDDLLWNGSWSGGGDDDGCEENLFISDPSCCSSPPLKELQTVAEILGLPEINTSASDMGS 60
           MDDLLWNGSW+ G DD G E  LF    S CSSPPL+ELQTVA ILGL EI T   +M +
Sbjct: 1   MDDLLWNGSWNNGEDDGGKESLLFSDGSSRCSSPPLQELQTVARILGLSEIETPTPEMRA 60

Query: 61  MALRKPAGVVDLKLLCDRGNSWPAEASSGGLLLEALENDKGRTAPESGSWDIFENPKPKQ 120
           + L      VD K       SWPA ASSGGLLLE LENDKG                   
Sbjct: 61  VEL-----AVDPK-------SWPAGASSGGLLLEELENDKG------------------- 120

Query: 121 QNPISEKQPSSANYNGFQQPSNSSPSPSSSNNNDVEPAGREAGMARMKAMMYHAAAFRPV 180
                                    SPSSSNN +   + R+  M+RMK M+YHAA FRPV
Sbjct: 121 ----------------------IGVSPSSSNNYETASSDRDQIMSRMKEMIYHAAVFRPV 180

Query: 181 NLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAA 240
           NLG+ETVEKKRRRNVK SKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAA
Sbjct: 181 NLGIETVEKKRRRNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAA 226

Query: 241 SYLKFLREQIKAMEDLSYKLGSLDCLSNCTSF---SFNSTSAFP 282
           SYLKFLR QIKA+E   YKLG     S+CTSF   SF S + FP
Sbjct: 241 SYLKFLRAQIKALEGNGYKLG-----SSCTSFNPTSFPSNAYFP 226

[Close]

BLAST of MS013175 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 139.8 bits (351), Expect = 3.4e-33
Identity = 90/171 (52.63%), Postives = 119/171 (69.59%), Query Frame = 0


Query: 112 IFENPKPKQQNPISEKQPSSANYNGFQQPSNSSPSPSSSNNNDVEPAGREAGMARMKAMM 171
           I++  + K + P +EK+   ++   FQ         S+  +++VEP      +A+MK M+
Sbjct: 200 IYDENQSKSKKPRTEKERGGSSNISFQH--------STCLSDNVEPDAE--AIAQMKEMI 259

Query: 172 YHAAAFRPVNLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMD 231
           Y AAAFRPVN GLE VEK +R+NVK S +PQTVAAR+RRE+ISEKIRVLQ LVPGG+KMD
Sbjct: 260 YRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMD 319

Query: 232 TASMLDEAASYLKFLREQIKAMEDLSYKLGSLDCLSNCTSFSFNST-SAFP 282
           TASMLDEAA+YLKFLR Q+KA+E+L  KL         T+ SF+S  ++FP
Sbjct: 320 TASMLDEAANYLKFLRAQVKALENLRPKLDQ-------TNLSFSSAPTSFP 353

[Close]

BLAST of MS013175 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-23
Identity = 67/150 (44.67%), Postives = 97/150 (64.67%), Query Frame = 0


Query: 106 ESGSWDIFENPKPKQQNPISEKQPSSANYNGFQQPSNSSPSPSSSNNNDVEPAGREAGMA 165
           ES +   F NP      P  +  P       F+     +PSPSSS           A MA
Sbjct: 39  ESNTHPFFFNP-THSHLPFDQTMPHHQPGLNFRY----APSPSSSLPEKRGGCSDNANMA 98

Query: 166 RMKAMMYHAAAFRPVNLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRLVP 225
            M+ M++  A  +P+++  E+V+  +R+NV+ SK+PQ+VAAR RRE+ISE+IR+LQRLVP
Sbjct: 99  AMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVP 158

Query: 226 GGSKMDTASMLDEAASYLKFLREQIKAMED 256
           GG+KMDTASMLDEA  Y+KFL++Q++++E+
Sbjct: 159 GGTKMDTASMLDEAIHYVKFLKKQVQSLEE 183

[Close]

BLAST of MS013175 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 107.1 bits (266), Expect = 2.4e-23
Identity = 60/127 (47.24%), Postives = 90/127 (70.87%), Query Frame = 0


Query: 140 PSNSSPSPSSSN-----NNDVEPAGREAGMARMKAMMYHAAAFRPVNLGLETVEKKRRRN 199
           PS+ SP+ + S+      N+         MA M+ M++  A  +P+++  E V+  +RRN
Sbjct: 66  PSSISPNTAYSSVFLDKRNNSNNNNNGTNMAAMREMIFRIAVMQPIHIDPEAVKPPKRRN 125

Query: 200 VKTSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAASYLKFLREQIKAME 259
           V+ SK+PQ+VAAR RRE+ISE+IR+LQRLVPGG+KMDTASMLDEA  Y+KFL++Q++++E
Sbjct: 126 VRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 185

Query: 260 DLSYKLG 262
           + +   G
Sbjct: 186 EQAVVTG 192

[Close]

BLAST of MS013175 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 2.0e-22
Identity = 53/91 (58.24%), Postives = 69/91 (75.82%), Query Frame = 0


Query: 164 MARMKAMMYHAAAFRPVNLGLETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRVLQRL 223
           M  MK M Y  A  +PV++   TV K  RRNV+ S +PQTV AR+RRE+ISEKIR+L+R+
Sbjct: 85  MDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRI 144

Query: 224 VPGGSKMDTASMLDEAASYLKFLREQIKAME 255
           VPGG+KMDTASMLDEA  Y KFL+ Q++ ++
Sbjct: 145 VPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]

BLAST of MS013175 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 2.0e-22
Identity = 60/110 (54.55%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 146 SPSSSNNNDVEPAGREAGMARMKAMMYHAAAFRPVNLGLETVEKKRRRNVKTSKEPQTVA 205
           S    ++ D E    E G   MK MMY  AA + V++   TV+K +RRNV+ S +PQ+VA
Sbjct: 76  SGDQEDDEDEEEPLEELG--AMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVA 135

Query: 206 ARKRREKISEKIRVLQRLVPGGSKMDTASMLDEAASYLKFLREQIKAMED 256
           AR RRE+ISE+IR+LQRLVPGG+KMDTASMLDEA  Y+KFL+ QI+ + +
Sbjct: 136 ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNN 183

The following BLAST results are available for this feature:

BLAST of MS013175 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148257.1	1.1e-150	98.59	transcription factor bHLH87-like [Momordica charantia]	[more]
XP_038902463.1	2.8e-82	67.87	transcription factor bHLH87-like [Benincasa hispida]	[more]
XP_004146860.1	1.4e-76	62.72	transcription factor bHLH87 [Cucumis sativus] >KGN59848.1 hypothetical protein C...	[more]
XP_008447580.1	4.1e-73	60.63	PREDICTED: transcription factor bHLH87-like [Cucumis melo] >KAA0061131.1 transcr...	[more]
XP_022948912.1	3.1e-65	58.45	transcription factor bHLH87-like [Cucurbita moschata]	[more]

BLAST of MS013175 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S3D2	4.7e-32	52.63	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]
A0A0P0WQ90	4.0e-23	49.28	Transcription factor LATE FLOWERING OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q9SND4	1.5e-22	44.67	Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1	[more]
Q9FHA7	3.4e-22	47.24	Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1	[more]
Q9LXD8	2.9e-21	54.55	Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1	[more]

BLAST of MS013175 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D4K8	5.2e-151	98.59	transcription factor bHLH87-like OS=Momordica charantia OX=3673 GN=LOC111016961 ...	[more]
A0A0A0LDH7	6.5e-77	62.72	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G850530 PE=4 S...	[more]
A0A5D3BVP3	2.0e-73	60.63	Transcription factor bHLH87-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BIP2	2.0e-73	60.63	transcription factor bHLH87-like OS=Cucumis melo OX=3656 GN=LOC103489996 PE=4 SV...	[more]
A0A6J1GAJ8	1.5e-65	58.45	transcription factor bHLH87-like OS=Cucurbita moschata OX=3662 GN=LOC111452426 P...	[more]

BLAST of MS013175 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21330.1	3.4e-33	52.63	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G50330.1	1.1e-23	44.67	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G67060.1	2.4e-23	47.24	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00120.1	2.0e-22	58.24	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G09750.1	2.0e-22	54.55	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 236..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..156
None	No IPR available	PANTHER	PTHR45914	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 109..275
None	No IPR available	PANTHER	PTHR45914:SF12	TRANSCRIPTION FACTOR BHLH87	coord: 109..275
None	No IPR available	CDD	cd11454	bHLH_AtIND_like	coord: 198..257 e-value: 1.02266E-33 score: 115.567
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 203..252 e-value: 7.6E-13 score: 58.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 205..246 e-value: 4.2E-6 score: 26.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 197..246 score: 15.637111
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 194..258 e-value: 1.4E-11 score: 45.9
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 199..260

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013175.1	MS013175.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity