MS013090 (gene) Bitter gourd (TR) v1

Overview


Name	MS013090
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DCC family protein At1g52590, chloroplastic
Location	scaffold459: 124942 .. 126587 (-)
RNA-Seq Expression	MS013090
Synteny	MS013090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATTCCGGTTCCCGGGAGAATTCCGGCACGATTTCTCCCGCCGCCTCAAGCGCAAGCTAGACCGCGGCATTCAATAGCTTTCGCCTCTTTATCTCCGGCGACCAAAGGCGAAACGATAGACTGGATCGAAGCAACTTCTGACTTCTTCGAGAAAGATTCGAGACCGATAATGCTATTTGACGGTACAGGATTTTTTCAGTGTTCCGATTGCTGTTCTTTCTTAATAAGCAAACCTCTGATTCTTCTATATTGTGTGGAATTCTCTGCTCACTGATAGAATTGAATTGAATTGAAGTGAGGTGCTAGTGTATGATTTTTCTAGTTTTTTCGGATTTATGGTATAAGTGAAGTGTCAATGATTTTCTTAATCTATTAGGTGTGTGCAATTTATGCAACGGAGGTGTAAGATTTGTTCGTGCTAATGACCGAAACAGGTTCGTGTTCTTTTGATTTTGTTTTTTGTTTTCCCTTGGAAAGACGATACTTATGTATGGTAGAAAGAAACATCTTAAAAATAATTCTCGAGGTTTGTTTTCAGGATCCGTGGTTTATATACTTTGATACTTTGATAACAATTTCGTTTTTTGTTCTTTAATTCTAAAAATTAAACTTGTTTTCTTAATATTACTTTATTATTTTTTTCACCTTTCTTCCGAACCTATTGAATTTTTAGCCAAATTTTAAAAACAAAAACAAGCTTTTGAAACTAGTTTTCGTGGTTTTAAAAAATTGGCTTACATTTTGAAAACGATTTTAAAATGTTAATAACAAGATGTGAAATTAATGGCTGTAAGCTTAATTTTAGAAAATATAAAACAAAATGGTTATCAAAGGGAACCCAACCTTGTTATCCTGAGTGAATTGTTGCCCCTAAAAATTTAAGTTTATGTGTTTCTGTAAACGGTCCATCATTTTTCTCTAAGGAGAAGTTGAAATTATCATTGGGATTACCTTGAAACCCTGTCTCTTGACGTTTACAGAAGAATACGATTAGAGGCTCTACAAAGTGAAGCTGGCAAGAAGCTGCTTAGAAGGTCGGGAAGAGCACCGGATGATATTTCGAGTGTTGTACTAGTTGAAAAGGATAGGTATATGCATGCAGCTCCTCTTTTAAAGGGTCCAATGAGAGCTATATTTGCCTATCTTGCTCATGATCAATGGTGTTCCAGAATTTTTTTAAAAATAATTAAAAATTACAAGATAACATATTTCTAGTTTATTGATCTCCCTGGAAAGAGAAGAAAGTTGCCCTTTTTTACTGAGAAAAAAAATATCTCTATCTTCCACAAGGCATTACTGCTATCTTTTCAGTTGAAGATTGTGATGCTAAATTTAAATACTGGACTGCAGATCTTATATCAAATCTGAAGCTGTTATAAGAATAATGGAACACTTAGAGTTACCCTTTCCCCAGCTTGCCTTTTTCCTCCAGTTTGTGCCACTGTAAGTCAATCCTTACTATCATTTAAAAAATTTTCAGCACCACACAGCTCTAAACAAAAAAAAAATAAAATCAGGTGTGAGCATTATCGTTCTAATTCTGATTACTAATTGAGTTGCAGGTTTGTTCGAAATTTTGTGTATGAAAACGTTGCAGATAACCGCTATAGGCTATTTGGACGCTCGGAGTCATGTGAAATA

mRNA sequence

ATGGCAATTCCGGTTCCCGGGAGAATTCCGGCACGATTTCTCCCGCCGCCTCAAGCGCAAGCTAGACCGCGGCATTCAATAGCTTTCGCCTCTTTATCTCCGGCGACCAAAGGCGAAACGATAGACTGGATCGAAGCAACTTCTGACTTCTTCGAGAAAGATTCGAGACCGATAATGCTATTTGACGGTGTGTGCAATTTATGCAACGGAGGTGTAAGATTTGTTCGTGCTAATGACCGAAACAGAAGAATACGATTAGAGGCTCTACAAAGTGAAGCTGGCAAGAAGCTGCTTAGAAGGTCGGGAAGAGCACCGGATGATATTTCGAGTGTTGTACTAGTTGAAAAGGATAGATCTTATATCAAATCTGAAGCTGTTATAAGAATAATGGAACACTTAGAGTTACCCTTTCCCCAGCTTGCCTTTTTCCTCCAGTTTGTGCCACTGTTTGTTCGAAATTTTGTGTATGAAAACGTTGCAGATAACCGCTATAGGCTATTTGGACGCTCGGAGTCATGTGAAATA

Coding sequence (CDS)

ATGGCAATTCCGGTTCCCGGGAGAATTCCGGCACGATTTCTCCCGCCGCCTCAAGCGCAAGCTAGACCGCGGCATTCAATAGCTTTCGCCTCTTTATCTCCGGCGACCAAAGGCGAAACGATAGACTGGATCGAAGCAACTTCTGACTTCTTCGAGAAAGATTCGAGACCGATAATGCTATTTGACGGTGTGTGCAATTTATGCAACGGAGGTGTAAGATTTGTTCGTGCTAATGACCGAAACAGAAGAATACGATTAGAGGCTCTACAAAGTGAAGCTGGCAAGAAGCTGCTTAGAAGGTCGGGAAGAGCACCGGATGATATTTCGAGTGTTGTACTAGTTGAAAAGGATAGATCTTATATCAAATCTGAAGCTGTTATAAGAATAATGGAACACTTAGAGTTACCCTTTCCCCAGCTTGCCTTTTTCCTCCAGTTTGTGCCACTGTTTGTTCGAAATTTTGTGTATGAAAACGTTGCAGATAACCGCTATAGGCTATTTGGACGCTCGGAGTCATGTGAAATA

Protein sequence

MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI

Homology

[Close]

BLAST of MS013090 vs. NCBI nr
Match: XP_022153577.1 (DCC family protein At1g52590, chloroplastic [Momordica charantia])

HSP 1 Score: 348.2 bits (892), Expect = 4.1e-92
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIML 60
           MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIML
Sbjct: 49  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIML 108

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 109 FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 168

Query: 121 IKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI 176
           IKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
Sbjct: 169 IKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI 223

[Close]

BLAST of MS013090 vs. NCBI nr
Match: XP_038900615.1 (DCC family protein At1g52590, chloroplastic [Benincasa hispida])

HSP 1 Score: 306.6 bits (784), Expect = 1.4e-79
Identity = 152/175 (86.86%), Postives = 164/175 (93.71%), Query Frame = 0


Query: 1   MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIML 60
           MA+P+ G IPARF+PP  A+ARP H+I+ ASLSP TK ETIDW+EATSDFFEKD+RPIML
Sbjct: 1   MALPLSGGIPARFVPPSLAKARPPHTISSASLSPTTKDETIDWVEATSDFFEKDTRPIML 60

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120

Query: 121 IKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI 176
           IKSEAV+RIME+LELPFPQLA FLQFVPLFVRN VY+N+ADNRY LFGRSESCEI
Sbjct: 121 IKSEAVLRIMEYLELPFPQLALFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI 175

[Close]

BLAST of MS013090 vs. NCBI nr
Match: XP_022955810.1 (DCC family protein At1g52590, chloroplastic [Cucurbita moschata])

HSP 1 Score: 298.5 bits (763), Expect = 3.7e-77
Identity = 147/175 (84.00%), Postives = 158/175 (90.29%), Query Frame = 0


Query: 1   MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIML 60
           MA+P+ GR+PARF+ P  A  RPR  +AF SLS AT   TIDW+EATSDFFEKD+RPIML
Sbjct: 1   MALPISGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120

Query: 121 IKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI 176
           IKSEAV+RIMEHLELPFPQLA FL+FVPLFVRN  Y+N+ADNRY LFGRSESCEI
Sbjct: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 175

[Close]

BLAST of MS013090 vs. NCBI nr
Match: KAG6581957.1 (DCC family protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 298.5 bits (763), Expect = 3.7e-77
Identity = 147/175 (84.00%), Postives = 158/175 (90.29%), Query Frame = 0


Query: 1   MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIML 60
           MA+P+ GR+PARF+ P  A  RPR  +AF SLS AT   TIDW+EATSDFFEKD+RPIML
Sbjct: 1   MALPISGRVPARFVLPSTANVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120

Query: 121 IKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI 176
           IKSEAV+RIMEHLELPFPQLA FL+FVPLFVRN  Y+N+ADNRY LFGRSESCEI
Sbjct: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 175

[Close]

BLAST of MS013090 vs. NCBI nr
Match: XP_023527546.1 (DCC family protein At1g52590, chloroplastic, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298.1 bits (762), Expect = 4.9e-77
Identity = 147/175 (84.00%), Postives = 158/175 (90.29%), Query Frame = 0


Query: 1   MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIML 60
           MA+P+ GR+PARF+ P  A  RPR  +AF SLS AT   TIDW+EATSDFFEKD+RPIML
Sbjct: 14  MALPLSGRVPARFVLPSMAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 73

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 74  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 133

Query: 121 IKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI 176
           IKSEAV+RIMEHLELPFPQLA FL+FVPLFVRN  Y+N+ADNRY LFGRSESCEI
Sbjct: 134 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 188

[Close]

BLAST of MS013090 vs. ExPASy Swiss-Prot
Match: Q9SSR1 (DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g52590 PE=2 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 9.6e-60
Identity = 120/176 (68.18%), Postives = 144/176 (81.82%), Query Frame = 0


Query: 1   MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPAT-KGETIDWIEATSDFFEKDSRPIM 60
           MAI +P     R     +AQ R R S   AS +  T + +++DW++ TS FFE+D RPIM
Sbjct: 1   MAILIPASF-GRLTITSRAQVRVRVS---ASANQRTIRRDSVDWVKETSSFFEEDKRPIM 60

Query: 61  LFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRS 120
           LFDGVCNLCNGGV+FVR +DRNR IR EALQSEAGKKLL RSGRAPDDISSVVLVE DRS
Sbjct: 61  LFDGVCNLCNGGVKFVRDHDRNRSIRFEALQSEAGKKLLLRSGRAPDDISSVVLVENDRS 120

Query: 121 YIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI 176
           YIKSEAV++IM++++LPFPQLAFFLQF PLFVR+F+YENVA+NRY +FGRS+SCE+
Sbjct: 121 YIKSEAVLKIMKYIDLPFPQLAFFLQFAPLFVRDFLYENVANNRYAMFGRSDSCEL 172

[Close]

BLAST of MS013090 vs. ExPASy Swiss-Prot
Match: P40761 (Uncharacterized protein YuxK OS=Bacillus subtilis (strain 168) OX=224308 GN=yuxK PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.4e-20
Identity = 50/116 (43.10%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 58  IMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKD 117
           ++LFDGVCNLCNG V+F+   D +  I   +LQSE G+ LL++SG   D   S V +E  
Sbjct: 10  VLLFDGVCNLCNGAVQFIIKRDPDGLISFTSLQSETGQSLLKKSGLPTDRFDSFVFIEDG 69

Query: 118 RSYIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESC 174
           + Y KS A I++  HL  P+     F   VP  VR+ VY  +A NRY+ FG+   C
Sbjct: 70  QVYTKSTAAIKVFRHLRGPWRLFVLFFA-VPKPVRDMVYSFIAKNRYKWFGKKNEC 124

[Close]

BLAST of MS013090 vs. ExPASy TrEMBL
Match: A0A6J1DJB0 (DCC family protein At1g52590, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111021048 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.0e-92
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIML 60
           MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIML
Sbjct: 49  MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIML 108

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 109 FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 168

Query: 121 IKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI 176
           IKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI
Sbjct: 169 IKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI 223

[Close]

BLAST of MS013090 vs. ExPASy TrEMBL
Match: A0A6J1GW36 (DCC family protein At1g52590, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111457690 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.8e-77
Identity = 147/175 (84.00%), Postives = 158/175 (90.29%), Query Frame = 0


Query: 1   MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIML 60
           MA+P+ GR+PARF+ P  A  RPR  +AF SLS AT   TIDW+EATSDFFEKD+RPIML
Sbjct: 1   MALPISGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120

Query: 121 IKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI 176
           IKSEAV+RIMEHLELPFPQLA FL+FVPLFVRN  Y+N+ADNRY LFGRSESCEI
Sbjct: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 175

[Close]

BLAST of MS013090 vs. ExPASy TrEMBL
Match: A0A6J1IYJ5 (DCC family protein At1g52590, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111479639 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.1e-77
Identity = 147/175 (84.00%), Postives = 158/175 (90.29%), Query Frame = 0


Query: 1   MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIML 60
           MA+P+ GR+PARF+ P  A  RPR  +AF SLS AT   TIDW+EATSDFFEKD+RPIML
Sbjct: 1   MALPLSGRVPARFVLPSTAHVRPRQPVAFVSLSSATNDGTIDWVEATSDFFEKDTRPIML 60

Query: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120
           FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY
Sbjct: 61  FDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRSY 120

Query: 121 IKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI 176
           IKSEAV+RIMEHLELPFPQLA FL+FVPLFVRN  Y+N+ADNRY LFGRSESCEI
Sbjct: 121 IKSEAVLRIMEHLELPFPQLALFLKFVPLFVRNIAYDNIADNRYTLFGRSESCEI 175

[Close]

BLAST of MS013090 vs. ExPASy TrEMBL
Match: A0A5D3E0H0 (DCC family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001690 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.5e-76
Identity = 150/176 (85.23%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 1   MAIPVPGRIPARFLPPPQAQA-RPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIM 60
           MA+P+ GR PA FLPP   +A    H IA ASLSP TK ETIDW+EATSDFFEKD+RPIM
Sbjct: 10  MALPLSGRFPAPFLPPSMRKAGMLLHPIASASLSPITKDETIDWVEATSDFFEKDTRPIM 69

Query: 61  LFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRS 120
           LFDGVCNLCNGGVRFVRANDRNRRIRLEALQS+AGKKLLRRSGRAPDDISSVVLVEKDRS
Sbjct: 70  LFDGVCNLCNGGVRFVRANDRNRRIRLEALQSDAGKKLLRRSGRAPDDISSVVLVEKDRS 129

Query: 121 YIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI 176
           YIKSEAV+RIME+LELPFPQLAFFLQFVPLFVRN VY+N+ADNRY LFGRSESCEI
Sbjct: 130 YIKSEAVLRIMEYLELPFPQLAFFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI 185

[Close]

BLAST of MS013090 vs. ExPASy TrEMBL
Match: A0A1S3BZD9 (DCC family protein At1g52590, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494707 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.5e-76
Identity = 150/176 (85.23%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 1   MAIPVPGRIPARFLPPPQAQA-RPRHSIAFASLSPATKGETIDWIEATSDFFEKDSRPIM 60
           MA+P+ GR PA FLPP   +A    H IA ASLSP TK ETIDW+EATSDFFEKD+RPIM
Sbjct: 10  MALPLSGRFPAPFLPPSMRKAGMLLHPIASASLSPITKDETIDWVEATSDFFEKDTRPIM 69

Query: 61  LFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRS 120
           LFDGVCNLCNGGVRFVRANDRNRRIRLEALQS+AGKKLLRRSGRAPDDISSVVLVEKDRS
Sbjct: 70  LFDGVCNLCNGGVRFVRANDRNRRIRLEALQSDAGKKLLRRSGRAPDDISSVVLVEKDRS 129

Query: 121 YIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI 176
           YIKSEAV+RIME+LELPFPQLAFFLQFVPLFVRN VY+N+ADNRY LFGRSESCEI
Sbjct: 130 YIKSEAVLRIMEYLELPFPQLAFFLQFVPLFVRNIVYDNIADNRYTLFGRSESCEI 185

[Close]

BLAST of MS013090 vs. TAIR 10
Match: AT1G52590.1 (Putative thiol-disulphide oxidoreductase DCC )

HSP 1 Score: 231.1 bits (588), Expect = 6.8e-61
Identity = 120/176 (68.18%), Postives = 144/176 (81.82%), Query Frame = 0


Query: 1   MAIPVPGRIPARFLPPPQAQARPRHSIAFASLSPAT-KGETIDWIEATSDFFEKDSRPIM 60
           MAI +P     R     +AQ R R S   AS +  T + +++DW++ TS FFE+D RPIM
Sbjct: 1   MAILIPASF-GRLTITSRAQVRVRVS---ASANQRTIRRDSVDWVKETSSFFEEDKRPIM 60

Query: 61  LFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKDRS 120
           LFDGVCNLCNGGV+FVR +DRNR IR EALQSEAGKKLL RSGRAPDDISSVVLVE DRS
Sbjct: 61  LFDGVCNLCNGGVKFVRDHDRNRSIRFEALQSEAGKKLLLRSGRAPDDISSVVLVENDRS 120

Query: 121 YIKSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESCEI 176
           YIKSEAV++IM++++LPFPQLAFFLQF PLFVR+F+YENVA+NRY +FGRS+SCE+
Sbjct: 121 YIKSEAVLKIMKYIDLPFPQLAFFLQFAPLFVRDFLYENVANNRYAMFGRSDSCEL 172

[Close]

BLAST of MS013090 vs. TAIR 10
Match: AT1G24095.1 (Putative thiol-disulphide oxidoreductase DCC )

HSP 1 Score: 79.0 bits (193), Expect = 4.3e-15
Identity = 43/118 (36.44%), Postives = 71/118 (60.17%), Query Frame = 0


Query: 58  IMLFDGVCNLCNGGVRFVRANDRNRRIRLEALQSEAGKKLLRRSGRAPDDISSVVLVEKD 117
           ++++DGVC+LC+GGV+++   D+ R+I+   LQS+A +  L  SG   +D+    L  + 
Sbjct: 75  VVVYDGVCHLCHGGVKWIIKADKYRKIKFCCLQSKAAEPYLEVSGVTREDVQKRFLFIEG 134

Query: 118 RSYI--KSEAVIRIMEHLELPFPQLAFFLQFVPLFVRNFVYENVADNRYRLFGRSESC 174
             +    S A +R++ +L LP+  L  F   VP  +R+ VY+ VA NRY  FG++E C
Sbjct: 135 LGFYHQASTAALRVVSYLPLPYSALNAF-SIVPTPLRDSVYDYVAKNRYDWFGKAEDC 191

The following BLAST results are available for this feature:

BLAST of MS013090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153577.1	4.1e-92	100.00	DCC family protein At1g52590, chloroplastic [Momordica charantia]	[more]
XP_038900615.1	1.4e-79	86.86	DCC family protein At1g52590, chloroplastic [Benincasa hispida]	[more]
XP_022955810.1	3.7e-77	84.00	DCC family protein At1g52590, chloroplastic [Cucurbita moschata]	[more]
KAG6581957.1	3.7e-77	84.00	DCC family protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023527546.1	4.9e-77	84.00	DCC family protein At1g52590, chloroplastic, partial [Cucurbita pepo subsp. pepo...	[more]

BLAST of MS013090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SSR1	9.6e-60	68.18	DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
P40761	7.4e-20	43.10	Uncharacterized protein YuxK OS=Bacillus subtilis (strain 168) OX=224308 GN=yuxK...	[more]

BLAST of MS013090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJB0	2.0e-92	100.00	DCC family protein At1g52590, chloroplastic OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1GW36	1.8e-77	84.00	DCC family protein At1g52590, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IYJ5	3.1e-77	84.00	DCC family protein At1g52590, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A5D3E0H0	1.5e-76	85.23	DCC family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G0...	[more]
A0A1S3BZD9	1.5e-76	85.23	DCC family protein At1g52590, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494...	[more]

BLAST of MS013090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52590.1	6.8e-61	68.18	Putative thiol-disulphide oxidoreductase DCC	[more]
AT1G24095.1	4.3e-15	36.44	Putative thiol-disulphide oxidoreductase DCC	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007263	DCC1-like thiol-disulfide oxidoreductase family	PFAM	PF04134	DUF393	coord: 60..169 e-value: 4.8E-29 score: 102.0
None	No IPR available	PANTHER	PTHR33639:SF2	THIOL-DISULFIDE OXIDOREDUCTASE DCC	coord: 18..175
None	No IPR available	PANTHER	PTHR33639	THIOL-DISULFIDE OXIDOREDUCTASE DCC	coord: 18..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013090.1	MS013090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0015035	protein-disulfide reductase activity