MS013084 (gene) Bitter gourd (TR) v1

Overview


Name	MS013084
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DUF4050 domain-containing protein
Location	scaffold459: 86749 .. 88364 (-)
RNA-Seq Expression	MS013084
Synteny	MS013084

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAACAGTGCCAACCGGTCACAGGGAAGCAATTCATCAATTAGCAAAACCAACCAAATACATGGGGACTCTAGTGAAGCTAACGTTTCTACAGCATTTGTAAATAATGGTAACTCCTCATTGCTTCTGTGATTTTTAGCAACTTCACTTGATCAACTTGTTGCCATAGCATTAAAACTCAGAGCAAAAGCTCCATTGTCTTGAATGTCGAGTCTCAGACTCTCGGTCCATGTTCAAGTTGATTCAATTGGATAACCAATACGTATTCTGTCATTTTTCTGTCCTTTTTGAATACAGAAGTTTACAGTTTAGGAGAGGTTCGATGTTGAACAATATTGTCATGTTATTAGGTGGTGGTTTGACAATTTTGGTTGTAGGTCTTCTTCTCTGGAATCAAACTAGGCAGCATTGGGTGAAGAACAAAAAGCCGTGCAACCGAGAATTATTTGTTCGGGAACCCAAATTAAAGTAAGTTGATCAATGGTCACTGATCTTTTCTATTACCAAAACAAGTTATTTTATATCCATAAATCCATCCAGAAACTATTGGTTTCCACTTATAAAGCTGTAATTAGATTCTTGTTGAACCATTTGCTCCAGTCCATACTGAAGATAATTTACTAAGTTACATTTAGACACTCCCATCGACAACTTTTAAAATGTCTCGTTTTTTTTTAGAAATTATTGTACCTCTTCTGGAAAAAAAATGTAAGTATTAATTCTGTACATTTTTTTTTGTTTTTTTTTTTCCCTTTTGCATTCAAAAACATTGTTACAAATTTCTTTGATGGTTTCCTTCTAACCCAGGCGATGGATTTTATTTTTGGATGCTAACTTCGTCATGGGAAACAATAGACTGTCTCTTCAAATTTTTGGGACAGGGATATAACCATTATACGTGTTTGGCCAAGTAAGCCGATGAAGTTTTACAGTGAAACATGAAAGCACCATGTATAGACATTATTCACAGTAGTTTAGAGCAAGAGCATCTTGCTATGAGCATTAGGGCTTGTTTGGAGAAAAATTTCCAAGATTTTTATTTTTTGTTTTATAAGTGTTTTTAAGGACTAATTGGTAAAGCTTAATGATATTGTACACATTAGAATAACTGTTCACGAATAACAACTTCATTTCCTTTGAAAAATAATTCCAAACAAATCTAGTTTCAAGCATTGAAATATACTTTATTGAAACCTTCACTTTGAAAAGTCTTGAAAAATATATTTCGACTCAGACTGAAAGCTTGCTAAAGATGATAAGAAACCAGAAAGAAAAATCTTTTTAACGCTCTGGTTTCTCTGAATTGGGAGTTAATTATTCTTGAACTTTGTTTGTTGTATCTTTGTCAGCACTCATTGTCTCTGCATGCCTAAATCCTTCTGGCTTTGCAGTTGGAATGCAACATACGACAGTTTGTTGGGAAGCAACAAGCCGTTCCCACAGCCTGTTCCACTTGCTGTAAGTGTCTCCCAAGCCAATACGCTTCATTTCTGTTCGATTTTTTTCTCATTAACCTCTCCCTTTTCTCTAACCGGGGGGGATCTAATCTTGAAATCATACAGGAAATGGTTGATTTTCTTGTGGACGTATGGGAACAAGAGGGGTTGTATGAT

mRNA sequence

ATGGACAACAGTGCCAACCGGTCACAGGGAAGCAATTCATCAATTAGCAAAACCAACCAAATACATGGGGACTCTAGTGAAGCTAACGTTTCTACAGCATTTGTAAATAATGGTCTTCTTCTCTGGAATCAAACTAGGCAGCATTGGGTGAAGAACAAAAAGCCGTGCAACCGAGAATTATTTGTTCGGGAACCCAAATTAAACACTCATTGTCTCTGCATGCCTAAATCCTTCTGGCTTTGCAGTTGGAATGCAACATACGACAGTTTGTTGGGAAGCAACAAGCCGTTCCCACAGCCTGTTCCACTTGCTGAAATGGTTGATTTTCTTGTGGACGTATGGGAACAAGAGGGGTTGTATGAT

Coding sequence (CDS)

ATGGACAACAGTGCCAACCGGTCACAGGGAAGCAATTCATCAATTAGCAAAACCAACCAAATACATGGGGACTCTAGTGAAGCTAACGTTTCTACAGCATTTGTAAATAATGGTCTTCTTCTCTGGAATCAAACTAGGCAGCATTGGGTGAAGAACAAAAAGCCGTGCAACCGAGAATTATTTGTTCGGGAACCCAAATTAAACACTCATTGTCTCTGCATGCCTAAATCCTTCTGGCTTTGCAGTTGGAATGCAACATACGACAGTTTGTTGGGAAGCAACAAGCCGTTCCCACAGCCTGTTCCACTTGCTGAAATGGTTGATTTTCTTGTGGACGTATGGGAACAAGAGGGGTTGTATGAT

Protein sequence

MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNRELFVREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLYD

Homology

[Close]

BLAST of MS013084 vs. NCBI nr
Match: XP_022153617.1 (uncharacterized protein LOC111021080 isoform X1 [Momordica charantia] >XP_022153618.1 uncharacterized protein LOC111021080 isoform X1 [Momordica charantia])

HSP 1 Score: 257.3 bits (656), Expect = 6.6e-65
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL 60
           MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL
Sbjct: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL 60

Query: 61  FVREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY 120
           FVREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY
Sbjct: 61  FVREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of MS013084 vs. NCBI nr
Match: XP_038899953.1 (uncharacterized protein LOC120087116 isoform X2 [Benincasa hispida])

HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51
Identity = 99/121 (81.82%), Postives = 110/121 (90.91%), Query Frame = 0


Query: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL 60
           MDN AN+SQG +SSI KTN++ GDSSE+NV TAFVN+GLLLWNQTRQHWV+N+K  N+E 
Sbjct: 1   MDNIANQSQGGDSSI-KTNRLQGDSSESNVPTAFVNHGLLLWNQTRQHWVQNRKSGNKEH 60

Query: 61  FVREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY 120
            +REPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQP+PL EMVDFLVD WEQEGLY
Sbjct: 61  LIREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPIPLGEMVDFLVDAWEQEGLY 120

Query: 121 D 122
           D
Sbjct: 121 D 120

[Close]

BLAST of MS013084 vs. NCBI nr
Match: XP_022153619.1 (uncharacterized protein LOC111021080 isoform X2 [Momordica charantia])

HSP 1 Score: 213.0 bits (541), Expect = 1.4e-51
Identity = 107/121 (88.43%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL 60
           MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL
Sbjct: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL 60

Query: 61  FVREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY 120
           FVREPKLN              WNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY
Sbjct: 61  FVREPKLN--------------WNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY 107

Query: 121 D 122
           D
Sbjct: 121 D 107

[Close]

BLAST of MS013084 vs. NCBI nr
Match: XP_038899929.1 (uncharacterized protein LOC120087116 isoform X1 [Benincasa hispida] >XP_038899938.1 uncharacterized protein LOC120087116 isoform X1 [Benincasa hispida] >XP_038899946.1 uncharacterized protein LOC120087116 isoform X1 [Benincasa hispida])

HSP 1 Score: 207.6 bits (527), Expect = 6.0e-50
Identity = 99/125 (79.20%), Postives = 110/125 (88.00%), Query Frame = 0


Query: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNN----GLLLWNQTRQHWVKNKKPC 60
           MDN AN+SQG +SSI KTN++ GDSSE+NV TAFVN+    GLLLWNQTRQHWV+N+K  
Sbjct: 1   MDNIANQSQGGDSSI-KTNRLQGDSSESNVPTAFVNHVLVVGLLLWNQTRQHWVQNRKSG 60

Query: 61  NRELFVREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQ 120
           N+E  +REPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQP+PL EMVDFLVD WEQ
Sbjct: 61  NKEHLIREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPIPLGEMVDFLVDAWEQ 120

Query: 121 EGLYD 122
           EGLYD
Sbjct: 121 EGLYD 124

[Close]

BLAST of MS013084 vs. NCBI nr
Match: XP_004152200.1 (uncharacterized protein LOC101214679 isoform X1 [Cucumis sativus] >XP_011652972.1 uncharacterized protein LOC101214679 isoform X1 [Cucumis sativus] >XP_011652973.1 uncharacterized protein LOC101214679 isoform X1 [Cucumis sativus] >XP_011652974.1 uncharacterized protein LOC101214679 isoform X1 [Cucumis sativus] >XP_031740240.1 uncharacterized protein LOC101214679 isoform X1 [Cucumis sativus] >XP_031740241.1 uncharacterized protein LOC101214679 isoform X1 [Cucumis sativus] >KGN52890.1 hypothetical protein Csa_014953 [Cucumis sativus])

HSP 1 Score: 205.3 bits (521), Expect = 3.0e-49
Identity = 96/121 (79.34%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL 60
           MDN AN+S G NSSI+ TNQ  GDSSE+NV TAFVN+GLLLWNQ RQHWV+N+K  N+  
Sbjct: 1   MDNIANQSSGGNSSIN-TNQSQGDSSESNVPTAFVNHGLLLWNQNRQHWVQNRKSGNKRQ 60

Query: 61  FVREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY 120
            +REPKL+THCLCMPKSFWLCSW+ATYDSLLGSNKPFPQPVPL EMVDFLVD+WEQEGLY
Sbjct: 61  VIREPKLHTHCLCMPKSFWLCSWSATYDSLLGSNKPFPQPVPLGEMVDFLVDIWEQEGLY 120

Query: 121 D 122
           D
Sbjct: 121 D 120

[Close]

BLAST of MS013084 vs. ExPASy TrEMBL
Match: A0A6J1DHY8 (uncharacterized protein LOC111021080 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021080 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.2e-65
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL 60
           MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL
Sbjct: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL 60

Query: 61  FVREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY 120
           FVREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY
Sbjct: 61  FVREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]

BLAST of MS013084 vs. ExPASy TrEMBL
Match: A0A6J1DJL4 (uncharacterized protein LOC111021080 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021080 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.9e-52
Identity = 107/121 (88.43%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL 60
           MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL
Sbjct: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL 60

Query: 61  FVREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY 120
           FVREPKLN              WNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY
Sbjct: 61  FVREPKLN--------------WNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY 107

Query: 121 D 122
           D
Sbjct: 121 D 107

[Close]

BLAST of MS013084 vs. ExPASy TrEMBL
Match: A0A0A0KTE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004990 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.4e-49
Identity = 96/121 (79.34%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL 60
           MDN AN+S G NSSI+ TNQ  GDSSE+NV TAFVN+GLLLWNQ RQHWV+N+K  N+  
Sbjct: 1   MDNIANQSSGGNSSIN-TNQSQGDSSESNVPTAFVNHGLLLWNQNRQHWVQNRKSGNKRQ 60

Query: 61  FVREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY 120
            +REPKL+THCLCMPKSFWLCSW+ATYDSLLGSNKPFPQPVPL EMVDFLVD+WEQEGLY
Sbjct: 61  VIREPKLHTHCLCMPKSFWLCSWSATYDSLLGSNKPFPQPVPLGEMVDFLVDIWEQEGLY 120

Query: 121 D 122
           D
Sbjct: 121 D 120

[Close]

BLAST of MS013084 vs. ExPASy TrEMBL
Match: A0A1S3BY48 (uncharacterized protein LOC103494700 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494700 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.1e-48
Identity = 93/121 (76.86%), Postives = 108/121 (89.26%), Query Frame = 0


Query: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL 60
           MDN AN+SQG +SSI+ TNQ  G+SSE+NV T FVN+GLLLWNQ RQHWV+N+K  NR+ 
Sbjct: 1   MDNIANQSQGGDSSIN-TNQSQGNSSESNVPTPFVNHGLLLWNQNRQHWVQNRKSGNRKQ 60

Query: 61  FVREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY 120
            +REPKL+THCLCMPKSFWLCSW+ATYDSLLG+NKPFPQP+PL EMVDFLVD+WEQEGLY
Sbjct: 61  VIREPKLHTHCLCMPKSFWLCSWSATYDSLLGNNKPFPQPIPLGEMVDFLVDIWEQEGLY 120

Query: 121 D 122
           D
Sbjct: 121 D 120

[Close]

BLAST of MS013084 vs. ExPASy TrEMBL
Match: A0A6J1KDW3 (uncharacterized protein LOC111492957 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492957 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 7.4e-46
Identity = 91/121 (75.21%), Postives = 105/121 (86.78%), Query Frame = 0


Query: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL 60
           MDNSAN+S+G +SS  KT Q+  DSS+AN + AFVN+GLLLWNQ RQ W++NKK   +E 
Sbjct: 1   MDNSANQSRGGDSSF-KTEQLQEDSSKAN-APAFVNHGLLLWNQNRQQWLQNKKANRKEQ 60

Query: 61  FVREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY 120
            +REPKL+THCLCMPKSFWLCSWNATYDSLLGSNKPFPQP+PL EMVDFLVD+WEQEGLY
Sbjct: 61  LIREPKLSTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPIPLGEMVDFLVDIWEQEGLY 119

Query: 121 D 122
           D
Sbjct: 121 D 119

[Close]

BLAST of MS013084 vs. TAIR 10
Match: AT5G25360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 114.4 bits (285), Expect = 6.4e-26
Identity = 67/121 (55.37%), Postives = 78/121 (64.46%), Query Frame = 0


Query: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL 60
           MDNS  +SQ S SSIS TN     +S +N  T FVN+GL LWNQTRQ W+ N     ++ 
Sbjct: 65  MDNSTLQSQRSMSSISFTNNTSTSASTSN-PTEFVNHGLNLWNQTRQQWLAN-GTSQKKA 124

Query: 61  FVREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY 120
            VREP +              SWNATY+SLLG NK F +P+PL EMVDFLVDVWEQEGLY
Sbjct: 125 KVREPTI--------------SWNATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQEGLY 169

Query: 121 D 122
           D
Sbjct: 185 D 169

[Close]

BLAST of MS013084 vs. TAIR 10
Match: AT5G25360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). )

HSP 1 Score: 114.4 bits (285), Expect = 6.4e-26
Identity = 67/121 (55.37%), Postives = 78/121 (64.46%), Query Frame = 0


Query: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL 60
           MDNS  +SQ S SSIS TN     +S +N  T FVN+GL LWNQTRQ W+ N     ++ 
Sbjct: 65  MDNSTLQSQRSMSSISFTNNTSTSASTSN-PTEFVNHGLNLWNQTRQQWLAN-GTSQKKA 124

Query: 61  FVREPKLNTHCLCMPKSFWLCSWNATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGLY 120
            VREP +              SWNATY+SLLG NK F +P+PL EMVDFLVDVWEQEGLY
Sbjct: 125 KVREPTI--------------SWNATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQEGLY 169

Query: 121 D 122
           D
Sbjct: 185 D 169

[Close]

BLAST of MS013084 vs. TAIR 10
Match: AT1G15350.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 112.8 bits (281), Expect = 1.9e-25
Identity = 65/122 (53.28%), Postives = 74/122 (60.66%), Query Frame = 0


Query: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL 60
           MDN    SQGS SS ++T      +  +N    +VN GLLLWNQTR+ WV   KP N   
Sbjct: 47  MDNITFPSQGSLSSSNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVGKDKPNNPVD 106

Query: 61  FVREPKLNTHCLCMPKSFWLCSWN-ATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGL 120
             +  KLN              WN ATYDSLLGSNK FPQP+PL EMVDFLVD+WEQEGL
Sbjct: 107 HNQGAKLN--------------WNTATYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGL 154

Query: 121 YD 122
           YD
Sbjct: 167 YD 154

[Close]

BLAST of MS013084 vs. TAIR 10
Match: AT1G15350.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 112.8 bits (281), Expect = 1.9e-25
Identity = 65/122 (53.28%), Postives = 74/122 (60.66%), Query Frame = 0


Query: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL 60
           MDN    SQGS SS ++T      +  +N    +VN GLLLWNQTR+ WV   KP N   
Sbjct: 47  MDNITFPSQGSLSSSNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVGKDKPNNPVD 106

Query: 61  FVREPKLNTHCLCMPKSFWLCSWN-ATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGL 120
             +  KLN              WN ATYDSLLGSNK FPQP+PL EMVDFLVD+WEQEGL
Sbjct: 107 HNQGAKLN--------------WNTATYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGL 154

Query: 121 YD 122
           YD
Sbjct: 167 YD 154

[Close]

BLAST of MS013084 vs. TAIR 10
Match: AT1G15350.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 145 Blast hits to 145 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 138; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 112.8 bits (281), Expect = 1.9e-25
Identity = 65/122 (53.28%), Postives = 74/122 (60.66%), Query Frame = 0


Query: 1   MDNSANRSQGSNSSISKTNQIHGDSSEANVSTAFVNNGLLLWNQTRQHWVKNKKPCNREL 60
           MDN    SQGS SS ++T      +  +N    +VN GLLLWNQTR+ WV   KP N   
Sbjct: 1   MDNITFPSQGSLSSSNQTFDSQSAARNSNAPPEYVNQGLLLWNQTRERWVGKDKPNNPVD 60

Query: 61  FVREPKLNTHCLCMPKSFWLCSWN-ATYDSLLGSNKPFPQPVPLAEMVDFLVDVWEQEGL 120
             +  KLN              WN ATYDSLLGSNK FPQP+PL EMVDFLVD+WEQEGL
Sbjct: 61  HNQGAKLN--------------WNTATYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGL 108

Query: 121 YD 122
           YD
Sbjct: 121 YD 108

The following BLAST results are available for this feature:

BLAST of MS013084 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153617.1	6.6e-65	100.00	uncharacterized protein LOC111021080 isoform X1 [Momordica charantia] >XP_022153...	[more]
XP_038899953.1	1.1e-51	81.82	uncharacterized protein LOC120087116 isoform X2 [Benincasa hispida]	[more]
XP_022153619.1	1.4e-51	88.43	uncharacterized protein LOC111021080 isoform X2 [Momordica charantia]	[more]
XP_038899929.1	6.0e-50	79.20	uncharacterized protein LOC120087116 isoform X1 [Benincasa hispida] >XP_03889993...	[more]
XP_004152200.1	3.0e-49	79.34	uncharacterized protein LOC101214679 isoform X1 [Cucumis sativus] >XP_011652972....	[more]

BLAST of MS013084 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS013084 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DHY8	3.2e-65	100.00	uncharacterized protein LOC111021080 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DJL4	6.9e-52	88.43	uncharacterized protein LOC111021080 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0KTE0	1.4e-49	79.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004990 PE=4 SV=1	[more]
A0A1S3BY48	2.1e-48	76.86	uncharacterized protein LOC103494700 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1KDW3	7.4e-46	75.21	uncharacterized protein LOC111492957 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of MS013084 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25360.1	6.4e-26	55.37	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G25360.2	6.4e-26	55.37	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G15350.2	1.9e-25	53.28	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G15350.1	1.9e-25	53.28	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G15350.3	1.9e-25	53.28	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025124	Domain of unknown function DUF4050	PFAM	PF13259	DUF4050	coord: 8..65 e-value: 1.4E-7 score: 32.0 coord: 82..121 e-value: 2.4E-14 score: 54.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR33373:SF15	DUF4050 FAMILY PROTEIN	coord: 1..121
None	No IPR available	PANTHER	PTHR33373	OS07G0479600 PROTEIN	coord: 1..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013084.1	MS013084.1	mRNA