MS012858 (gene) Bitter gourd (TR) v1

Overview
NameMS012858
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold63: 4049348 .. 4049443 (+)
RNA-Seq ExpressionMS012858
SyntenyMS012858
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCCACGCAGTAGGGTGCAAAGGGATTCAATCCAGGGCCAAAGACACGAAGATTGAGAACGATTACGATGAATGTCATAAAGGGCTTAAAGAT

mRNA sequence

ATGAGCCACGCAGTAGGGTGCAAAGGGATTCAATCCAGGGCCAAAGACACGAAGATTGAGAACGATTACGATGAATGTCATAAAGGGCTTAAAGAT

Coding sequence (CDS)

ATGAGCCACGCAGTAGGGTGCAAAGGGATTCAATCCAGGGCCAAAGACACGAAGATTGAGAACGATTACGATGAATGTCATAAAGGGCTTAAAGAT

Protein sequence

MSHAVGCKGIQSRAKDTKIENDYDECHKGLKD
Homology
[Close]
BLAST of MS012858 vs. NCBI nr
Match: KGN53439.1 (hypothetical protein Csa_014595 [Cucumis sativus])

HSP 1 Score: 65.5 bits (158), Expect = 9.7e-08
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 1  MSHAVGCKGIQSRAKDTKIENDYDECHKGLKD 33
          MSHAVGCKGIQSR K+TKI NDYDECHKGLKD
Sbjct: 1  MSHAVGCKGIQSRTKNTKIVNDYDECHKGLKD 32

[Close]
BLAST of MS012858 vs. ExPASy TrEMBL
Match: A0A0A0KX61 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G055340 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.7e-08
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 1  MSHAVGCKGIQSRAKDTKIENDYDECHKGLKD 33
          MSHAVGCKGIQSR K+TKI NDYDECHKGLKD
Sbjct: 1  MSHAVGCKGIQSRTKNTKIVNDYDECHKGLKD 32

The following BLAST results are available for this feature:
BLAST of MS012858 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53439.19.7e-0890.63hypothetical protein Csa_014595 [Cucumis sativus][more]
BLAST of MS012858 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS012858 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KX614.7e-0890.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G055340 PE=4 SV=1[more]
BLAST of MS012858 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS012858.1MS012858.1mRNA