MS012844 (gene) Bitter gourd (TR) v1

Overview


Name	MS012844
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	F-box protein SKIP8-like
Location	scaffold63: 3914592 .. 3917001 (+)
RNA-Seq Expression	MS012844
Synteny	MS012844

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATTGCCTCTGCTGCCACCATTGCCTTGTCGTCACAACCCTTTCCCATAGCTGCGATTGTTACGTTTCTTTGTTTTCTTCTCGCTCTTTTCGCCGCCGTTCACATTAGGAGGGCGAAAGCGCTGCAATCGGTGGGCGAGGGCGGTCTTTCTGACTCATTGGTGGGTGCAAGGAATTGTGATTGTACCTGTTCGCTTAACGGTGGTGTGGTTATTGGGGGTTCCGACCCCAGGGCTTCGATTACTTCTTCAGCCAGTTCGAGTATGCCTTATTTGAACGGCCGTGTAGTGGAAGTGTTGGAGAAGGCACCGGTGGTCGTGACGGAGCGGCAGACGGGCGCTTCGATGATGGAGCAGTTGGTTCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTATCCCAGTCTGTGCCGTTTGTCCATGACTAATTCGTTGATGCGCAAGGCAGCGAATGATGATAATGCCTGGAAGGCGCTTTATCATAAGGTACGGGTTTGAATTAATCTTCTTTTGTACGGTTTTCGTCTGAACTGGTGGAGTTTCGGTAAATCGTTTTTCTTCTGGAAGATGAGTCTTGGGAAGAAATACGATGCGAATTTAGAGTTGTGTACTAGGCAATTTGCAAAGAGTTTTACTGCCACCATCTCGTCTACATTTACTGAATTATGTCAACGTCTATTTGTAATTCTCGAGACGAACAAATTGACTGCATTAACTTTTATCTTTCAAGTAATGTAATCTTTTCAGTTTATGGCTTGCTCCCACAGTTCTTGGAGTGGCAAGAGCTATAGCTGTGCTCTACATTTGTGTACTATCTTAGATGTTTAAATCTATTTAGGATTCTCTGGGGCTGAAATTACATTTTTCTTGAAATCTTTTAGGACTTCACACTGGAACAGGATACTGTAACTCCAACAAACGGGTGGAAGGCTTATTATGCTGCAACAAGAACAATTATGAATGTCAATGCCCAATTCTTTAACATCGTCAGAGAGAGGTCTCTTCAAGCGATGAGTCATTTTTGGTTGAATGCAGATTACGTGAAGTGTATTCATGCCTCAGGAGAATTCTTTTCTGGGTATTTACCTTTGTTTGTCTCTCTCCATTAATTTAGCTTTATCATCATTACCATGCTATCTGACTGCTGCTTTATATGGCTGATAAAATTAGCAAACATGTCTAACAGCTGTTTATTTTAGACTTATGGGCCTTGATTATATGACTCTTGTTATTGTCTCACTTATCAGATCTTTACTTATTCTGAGCCTTCAATTAAGAATTATTAGAAAAAATACATGAGGCTTATGATTATTGTCAGAATGTATGGGTGCTGAGGGTTATTTGAACGTCTTGAATTTAAGTTTTTCCCTAAGTTAGAACGTTTGAGGACAAAAATTCATGCACTTCGTTGCGACTGGTAATAAGCTTTGACATTGTATATCGTATCACTTGATAAAAATAAAACAATTTTATGAGATCTTGGATAAAGGGTTTTCCTCATGTTTTTGCATGATTTTCTCATTTATTTTGGAAGGGACATCTTTATACACTGAAACATGGGCCAATACAACTATTTGTGGTGGACCAATGCTGCATTATGAACTCTGTTCTTTGAATCTGCTAATCTAAGTGTTTCTTGAGGGAAATATTCTGGCCATGTACATGGCTAGCTACTTCATATGATTGATGATATTTTGAAGAATATTGCTTGTTTTGTTAGGATCATATGATATTTTGAAGAATATTGCTTGTATTTTGTTAGGATCATATTAAGTTGACTTACTGGGCTACCTTTAATGAAAGCAAATATGTTCGCTTAAATGTGAAGCTGTGAGGAATGAGAATGCAGAATGTATCCATTTAGATTAGATGATATATAATTATAAGTATGTGATTTTATCTTTCTGCCTCTTAGGGTTTTTTGCATGATCAACAAAGCCGTTTTAGGGGTGAATTATGATGAAGGGATTCAAAGTGAACTTGTGATGTGGCTATATATGGATGGTTTGATGTAAATACTTGATCTATAAAAAGATTATTAATGTATGTTATTTTATTCAATAGCTCTATGAATTCCTGTTATATAGCTTTCAAATAAAATAAATTTACATAATTAGGTACTTACCATGTTCATGCTTCCTTATACAGGTATAATGCAGTAATTCAGAGCTGGCAGCTTGCGTTTAATTGGGAACAAGGGATTAATTTTCAGGTGCGTGATGCACGGGCTCGTGTCCTTTCAGACATGGCCTGGGTTAGCATGAAAACCTATGTCGACATGGATACAGGACCATTCAATGTGACTAACATCTACGAGTTCCATAACGGTCGATGGTACATGGTTCATCATCACAGCTCTGTGATGCTTATTGATGGAGAGGTGGAACAACAAATGGTGCATGGA

mRNA sequence

ATGGAGATTGCCTCTGCTGCCACCATTGCCTTGTCGTCACAACCCTTTCCCATAGCTGCGATTGTTACGTTTCTTTGTTTTCTTCTCGCTCTTTTCGCCGCCGTTCACATTAGGAGGGCGAAAGCGCTGCAATCGGTGGGCGAGGGCGGTCTTTCTGACTCATTGGTGGGTGCAAGGAATTGTGATTGTACCTGTTCGCTTAACGGTGGTGTGGTTATTGGGGGTTCCGACCCCAGGGCTTCGATTACTTCTTCAGCCAGTTCGAGTATGCCTTATTTGAACGGCCGTGTAGTGGAAGTGTTGGAGAAGGCACCGGTGGTCGTGACGGAGCGGCAGACGGGCGCTTCGATGATGGAGCAGTTGGTTCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTATCCCAGTCTGTGCCGTTTGTCCATGACTAATTCGTTGATGCGCAAGGCAGCGAATGATGATAATGCCTGGAAGGCGCTTTATCATAAGGACTTCACACTGGAACAGGATACTGTAACTCCAACAAACGGGTGGAAGGCTTATTATGCTGCAACAAGAACAATTATGAATGTCAATGCCCAATTCTTTAACATCGTCAGAGAGAGGTCTCTTCAAGCGATGAGTCATTTTTGGTTGAATGCAGATTACGTGAAGTGTATTCATGCCTCAGGAGAATTCTTTTCTGGGTATAATGCAGTAATTCAGAGCTGGCAGCTTGCGTTTAATTGGGAACAAGGGATTAATTTTCAGGTGCGTGATGCACGGGCTCGTGTCCTTTCAGACATGGCCTGGGTTAGCATGAAAACCTATGTCGACATGGATACAGGACCATTCAATGTGACTAACATCTACGAGTTCCATAACGGTCGATGGTACATGGTTCATCATCACAGCTCTGTGATGCTTATTGATGGAGAGGTGGAACAACAAATGGTGCATGGA

Coding sequence (CDS)

ATGGAGATTGCCTCTGCTGCCACCATTGCCTTGTCGTCACAACCCTTTCCCATAGCTGCGATTGTTACGTTTCTTTGTTTTCTTCTCGCTCTTTTCGCCGCCGTTCACATTAGGAGGGCGAAAGCGCTGCAATCGGTGGGCGAGGGCGGTCTTTCTGACTCATTGGTGGGTGCAAGGAATTGTGATTGTACCTGTTCGCTTAACGGTGGTGTGGTTATTGGGGGTTCCGACCCCAGGGCTTCGATTACTTCTTCAGCCAGTTCGAGTATGCCTTATTTGAACGGCCGTGTAGTGGAAGTGTTGGAGAAGGCACCGGTGGTCGTGACGGAGCGGCAGACGGGCGCTTCGATGATGGAGCAGTTGGTTCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTATCCCAGTCTGTGCCGTTTGTCCATGACTAATTCGTTGATGCGCAAGGCAGCGAATGATGATAATGCCTGGAAGGCGCTTTATCATAAGGACTTCACACTGGAACAGGATACTGTAACTCCAACAAACGGGTGGAAGGCTTATTATGCTGCAACAAGAACAATTATGAATGTCAATGCCCAATTCTTTAACATCGTCAGAGAGAGGTCTCTTCAAGCGATGAGTCATTTTTGGTTGAATGCAGATTACGTGAAGTGTATTCATGCCTCAGGAGAATTCTTTTCTGGGTATAATGCAGTAATTCAGAGCTGGCAGCTTGCGTTTAATTGGGAACAAGGGATTAATTTTCAGGTGCGTGATGCACGGGCTCGTGTCCTTTCAGACATGGCCTGGGTTAGCATGAAAACCTATGTCGACATGGATACAGGACCATTCAATGTGACTAACATCTACGAGTTCCATAACGGTCGATGGTACATGGTTCATCATCACAGCTCTGTGATGCTTATTGATGGAGAGGTGGAACAACAAATGGTGCATGGA

Protein sequence

MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVHIRRAKALQSVGEGGLSDSLVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIDGEVEQQMVHG

Homology

[Close]

BLAST of MS012844 vs. NCBI nr
Match: XP_022136371.1 (F-box protein SKIP8-like [Momordica charantia])

HSP 1 Score: 624.4 bits (1609), Expect = 5.4e-175
Identity = 312/315 (99.05%), Postives = 313/315 (99.37%), Query Frame = 0


Query: 1   MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVHIRRAKALQSVGEGGLSDSLVGARN 60
           MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVHIRRAKALQSVGEGGLSDSLVGARN
Sbjct: 1   MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVHIRRAKALQSVGEGGLSDSLVGARN 60

Query: 61  CDCTCSLNGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTGASMMEQ 120
           CDCTCSLNGGVVIGGSDPRASITSSA +SMPYLNGRVVEVLEKAPVVVTERQTGASMMEQ
Sbjct: 61  CDCTCSLNGGVVIGGSDPRASITSSARTSMPYLNGRVVEVLEKAPVVVTERQTGASMMEQ 120

Query: 121 LVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWK 180
           LVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWK
Sbjct: 121 LVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWK 180

Query: 181 AYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQL 240
           AYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQL
Sbjct: 181 AYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQL 240

Query: 241 AFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSS 300
           AFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSS
Sbjct: 241 AFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSS 300

Query: 301 VMLIDGEVEQQMVHG 316
           VMLIDGEVEQQMV G
Sbjct: 301 VMLIDGEVEQQMVQG 315

[Close]

BLAST of MS012844 vs. NCBI nr
Match: XP_038880969.1 (F-box protein SKIP8-like [Benincasa hispida])

HSP 1 Score: 563.9 bits (1452), Expect = 8.6e-157
Identity = 284/321 (88.47%), Postives = 295/321 (91.90%), Query Frame = 0


Query: 1   MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAV------HIRRAKALQSVGEGGLSDS 60
           MEI S+ATIALSSQPFPIAAIVTFLCFLLALFAAV      +IRR KALQSV        
Sbjct: 1   MEIISSATIALSSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKALQSVA------- 60

Query: 61  LVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTG 120
            +G RNC+CTCSLNGGVVIGG DPRA ITSS S+SMPYLNGR VEVLEKAPVVVTERQTG
Sbjct: 61  -LGTRNCNCTCSLNGGVVIGGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTG 120

Query: 121 ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVT 180
           ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVT
Sbjct: 121 ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVT 180

Query: 181 PTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAV 240
           P NGWKAYYAATRTIMN+NAQF+NI+R+RSLQAMS FWLNADYVKCIHASGEFFSGYNAV
Sbjct: 181 PINGWKAYYAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAV 240

Query: 241 IQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM 300
           IQSWQLAFNWEQGINFQVRD RARVL+DMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM
Sbjct: 241 IQSWQLAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM 300

Query: 301 VHHHSSVMLIDGEVEQQMVHG 316
           VHHHSSVMLI GE+EQQMVHG
Sbjct: 301 VHHHSSVMLIVGEMEQQMVHG 313

[Close]

BLAST of MS012844 vs. NCBI nr
Match: KAG7031147.1 (F-box protein SKIP8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 555.4 bits (1430), Expect = 3.1e-154
Identity = 278/321 (86.60%), Postives = 291/321 (90.65%), Query Frame = 0


Query: 1   MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVH------IRRAKALQSVGEGGLSDS 60
           MEIASAAT+AL SQPFPIAAIVTFLCFLLALFAAV       IRR KALQS G       
Sbjct: 1   MEIASAATVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEG------- 60

Query: 61  LVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTG 120
            VG RNC+CTCSLNGGVVIGG DPRA +TSS  ++MPYLNGRVVEVLEK PVVVTERQTG
Sbjct: 61  -VGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKVPVVVTERQTG 120

Query: 121 ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVT 180
           ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQDTVT
Sbjct: 121 ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVT 180

Query: 181 PTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAV 240
           P NGWKAYYAATRTIMN+NAQF NI+RERSLQAMSHFWLNADYVKCIH SGEFFSGYNAV
Sbjct: 181 PINGWKAYYAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHPSGEFFSGYNAV 240

Query: 241 IQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM 300
           IQSWQ+AFNWEQGINFQVRD RARVL+DMAWVSMKTYVDMDTGPFNVTN+YE+HNGRWYM
Sbjct: 241 IQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYM 300

Query: 301 VHHHSSVMLIDGEVEQQMVHG 316
           VHHHSSVMLI GEVE+QM HG
Sbjct: 301 VHHHSSVMLIVGEVEEQMAHG 313

[Close]

BLAST of MS012844 vs. NCBI nr
Match: XP_022942140.1 (F-box protein SKIP8-like [Cucurbita moschata])

HSP 1 Score: 554.7 bits (1428), Expect = 5.2e-154
Identity = 277/321 (86.29%), Postives = 291/321 (90.65%), Query Frame = 0


Query: 1   MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVH------IRRAKALQSVGEGGLSDS 60
           MEIASA T+AL SQPFPIAAIVTFLCFLLALFAAV       IRR KALQS G       
Sbjct: 1   MEIASAVTVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEG------- 60

Query: 61  LVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTG 120
            VG RNC+CTCSLNGGVVIGG DPRA +TSS  ++MPYLNGRVVEVLEK P+VVTERQTG
Sbjct: 61  -VGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKTPMVVTERQTG 120

Query: 121 ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVT 180
           ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQDTVT
Sbjct: 121 ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVT 180

Query: 181 PTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAV 240
           P NGWKAYYAATRTIMN+NAQF NI+RERSLQAMSHFWLNADYVKCIHASGEFFSGYNAV
Sbjct: 181 PINGWKAYYAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAV 240

Query: 241 IQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM 300
           IQSWQ+AFNWEQGINFQVRD RARVL+DMAWVSMKTYVDMDTGPFNVTN+YE+HNGRWYM
Sbjct: 241 IQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYM 300

Query: 301 VHHHSSVMLIDGEVEQQMVHG 316
           VHHHSSVMLI GEVE+QM HG
Sbjct: 301 VHHHSSVMLIVGEVEEQMAHG 313

[Close]

BLAST of MS012844 vs. NCBI nr
Match: KAG6600509.1 (F-box protein SKIP8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 553.9 bits (1426), Expect = 8.9e-154
Identity = 277/321 (86.29%), Postives = 290/321 (90.34%), Query Frame = 0


Query: 1   MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVH------IRRAKALQSVGEGGLSDS 60
           MEIASAAT+AL SQPFPIAAIVTFLCFLLALF AV       IRR KALQS G       
Sbjct: 1   MEIASAATVALWSQPFPIAAIVTFLCFLLALFVAVRLVSVPFIRRTKALQSEG------- 60

Query: 61  LVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTG 120
            VG RNC+CTCSLNGGVVIGG DPRA +TSS  ++MPYLNGRVVEVLEK PVVVTERQTG
Sbjct: 61  -VGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKVPVVVTERQTG 120

Query: 121 ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVT 180
           ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQDTVT
Sbjct: 121 ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVT 180

Query: 181 PTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAV 240
           P NGWKAYYAATRTIMN+NAQF NI+RERSLQAMSHFWLNADYVKCIH SGEFFSGYNAV
Sbjct: 181 PINGWKAYYAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHPSGEFFSGYNAV 240

Query: 241 IQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM 300
           IQSWQ+AFNWEQGINFQVRD RARVL+DMAWVSMKTYVDMDTGPFNVTN+YE+HNGRWYM
Sbjct: 241 IQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYM 300

Query: 301 VHHHSSVMLIDGEVEQQMVHG 316
           VHHHSSVMLI GEVE+QM HG
Sbjct: 301 VHHHSSVMLIVGEVEEQMAHG 313

[Close]

BLAST of MS012844 vs. ExPASy Swiss-Prot
Match: Q93YV9 (F-box protein SKIP8 OS=Arabidopsis thaliana OX=3702 GN=SKIP8 PE=1 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 7.7e-92
Identity = 162/247 (65.59%), Postives = 189/247 (76.52%), Query Frame = 0


Query: 68  NGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTGASMMEQLVPEITT 127
           NGG    G   R ++T+S                      V + + G SMMEQLVPEITT
Sbjct: 8   NGGTPPMGGGERTTVTTS---------------------TVADDKPGVSMMEQLVPEITT 67

Query: 128 HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATR 187
           HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD +TP NGWK YYA TR
Sbjct: 68  HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPVNGWKEYYATTR 127

Query: 188 TIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQG 247
            I++VN +FF I+R+R+LQAM+  WLN+DYVKCIHASGE FSGYN VIQSWQL FNWEQG
Sbjct: 128 AIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCFNWEQG 187

Query: 248 INFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIDGE 307
            +FQV   R R+L+DMAWV+MK Y+++D GPF +TN++EFHNGRW+MVHHHSSVMLID  
Sbjct: 188 FDFQVHTVRTRILTDMAWVTMKAYLNVDGGPFLITNVFEFHNGRWHMVHHHSSVMLIDD- 231

Query: 308 VEQQMVH 315
            +Q +VH
Sbjct: 248 -QQVVVH 231

[Close]

BLAST of MS012844 vs. ExPASy Swiss-Prot
Match: Q9T0B0 (Probable F-box protein At4g23960 OS=Arabidopsis thaliana OX=3702 GN=At4g23960 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 5.1e-35
Identity = 68/115 (59.13%), Postives = 88/115 (76.52%), Query Frame = 0


Query: 117 MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPT 176
           M+EQL PE+T +AL YLDY SLC+LSMT+S MRK ANDD  W+ALY ++FT E +  TP 
Sbjct: 1   MIEQLFPEVTCYALRYLDYSSLCQLSMTSSSMRKTANDDVLWRALYFQEFTEETNGGTPV 60

Query: 177 NGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGY 232
           NGWKA++A T+ +M VN +FF+I+  RSL  M+  WLN+DYVKC + SGE F+GY
Sbjct: 61  NGWKAFFAVTKQVMTVNDKFFSILDSRSLPRMTSLWLNSDYVKCFNGSGELFTGY 115

[Close]

BLAST of MS012844 vs. ExPASy TrEMBL
Match: A0A6J1C3C3 (F-box protein SKIP8-like OS=Momordica charantia OX=3673 GN=LOC111008096 PE=4 SV=1)

HSP 1 Score: 624.4 bits (1609), Expect = 2.6e-175
Identity = 312/315 (99.05%), Postives = 313/315 (99.37%), Query Frame = 0


Query: 1   MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVHIRRAKALQSVGEGGLSDSLVGARN 60
           MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVHIRRAKALQSVGEGGLSDSLVGARN
Sbjct: 1   MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVHIRRAKALQSVGEGGLSDSLVGARN 60

Query: 61  CDCTCSLNGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTGASMMEQ 120
           CDCTCSLNGGVVIGGSDPRASITSSA +SMPYLNGRVVEVLEKAPVVVTERQTGASMMEQ
Sbjct: 61  CDCTCSLNGGVVIGGSDPRASITSSARTSMPYLNGRVVEVLEKAPVVVTERQTGASMMEQ 120

Query: 121 LVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWK 180
           LVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWK
Sbjct: 121 LVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWK 180

Query: 181 AYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQL 240
           AYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQL
Sbjct: 181 AYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQL 240

Query: 241 AFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSS 300
           AFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSS
Sbjct: 241 AFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSS 300

Query: 301 VMLIDGEVEQQMVHG 316
           VMLIDGEVEQQMV G
Sbjct: 301 VMLIDGEVEQQMVQG 315

[Close]

BLAST of MS012844 vs. ExPASy TrEMBL
Match: A0A6J1FVP4 (F-box protein SKIP8-like OS=Cucurbita moschata OX=3662 GN=LOC111447294 PE=4 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 2.5e-154
Identity = 277/321 (86.29%), Postives = 291/321 (90.65%), Query Frame = 0


Query: 1   MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAVH------IRRAKALQSVGEGGLSDS 60
           MEIASA T+AL SQPFPIAAIVTFLCFLLALFAAV       IRR KALQS G       
Sbjct: 1   MEIASAVTVALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEG------- 60

Query: 61  LVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTG 120
            VG RNC+CTCSLNGGVVIGG DPRA +TSS  ++MPYLNGRVVEVLEK P+VVTERQTG
Sbjct: 61  -VGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTRTTMPYLNGRVVEVLEKTPMVVTERQTG 120

Query: 121 ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVT 180
           ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQDTVT
Sbjct: 121 ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVT 180

Query: 181 PTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAV 240
           P NGWKAYYAATRTIMN+NAQF NI+RERSLQAMSHFWLNADYVKCIHASGEFFSGYNAV
Sbjct: 181 PINGWKAYYAATRTIMNINAQFCNIIRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAV 240

Query: 241 IQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM 300
           IQSWQ+AFNWEQGINFQVRD RARVL+DMAWVSMKTYVDMDTGPFNVTN+YE+HNGRWYM
Sbjct: 241 IQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYM 300

Query: 301 VHHHSSVMLIDGEVEQQMVHG 316
           VHHHSSVMLI GEVE+QM HG
Sbjct: 301 VHHHSSVMLIVGEVEEQMAHG 313

[Close]

BLAST of MS012844 vs. ExPASy TrEMBL
Match: A0A0A0KX34 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G052690 PE=4 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 5.6e-154
Identity = 277/321 (86.29%), Postives = 291/321 (90.65%), Query Frame = 0


Query: 1   MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAV------HIRRAKALQSVGEGGLSDS 60
           MEI S+ATIALSSQPFPIAAIVTFLCFLLA+F AV      +IRR K LQS         
Sbjct: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKTLQS--------E 60

Query: 61  LVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTG 120
            VG RNC+CTCSLNGGVVI G DPRA ITSS S+SMPYLNGR VEVLEKAPVVVTERQTG
Sbjct: 61  SVGTRNCNCTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTG 120

Query: 121 ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVT 180
           ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVT
Sbjct: 121 ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVT 180

Query: 181 PTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAV 240
           P NGWK+YYAATRTIMN+NAQF+NI+R+RSLQAMS FWLNADYVKCIHASGEFFSGYNAV
Sbjct: 181 PINGWKSYYAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAV 240

Query: 241 IQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM 300
           +QSWQ+AFNWEQGINFQVRD RARVL+DMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM
Sbjct: 241 VQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM 300

Query: 301 VHHHSSVMLIDGEVEQQMVHG 316
           VHHHSSVMLI GE+EQQMVHG
Sbjct: 301 VHHHSSVMLIVGEMEQQMVHG 313

[Close]

BLAST of MS012844 vs. ExPASy TrEMBL
Match: A0A6J1EUJ3 (F-box protein SKIP8-like OS=Cucurbita moschata OX=3662 GN=LOC111437693 PE=4 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 7.3e-154
Identity = 279/321 (86.92%), Postives = 292/321 (90.97%), Query Frame = 0


Query: 1   MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAV------HIRRAKALQSVGEGGLSDS 60
           MEIASAATIAL SQPFPIAAIVTFLCFLLALFAAV      +IRR K +Q  G       
Sbjct: 1   MEIASAATIALLSQPFPIAAIVTFLCFLLALFAAVRLVSVPYIRRTKTVQLEG------- 60

Query: 61  LVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTG 120
            VG RN +CTCSLNGGV IGG +PRA ITSS S+SMPYLNGR VEVLEKAPVVVTERQTG
Sbjct: 61  -VGTRNFNCTCSLNGGVAIGGLNPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTG 120

Query: 121 ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVT 180
           ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDFTLEQDTVT
Sbjct: 121 ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDSAWKALYHKDFTLEQDTVT 180

Query: 181 PTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAV 240
           P NGWKAYYAATRTIMN+NAQF+NI+R+RSLQAMSHFWLNADYVKCIHASGEFFSGYNAV
Sbjct: 181 PINGWKAYYAATRTIMNINAQFYNIIRDRSLQAMSHFWLNADYVKCIHASGEFFSGYNAV 240

Query: 241 IQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM 300
           IQSWQ+AFNWEQGINFQVRD RARVL+DMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM
Sbjct: 241 IQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM 300

Query: 301 VHHHSSVMLIDGEVEQQMVHG 316
           VHHHSSVMLI GE+EQQMVHG
Sbjct: 301 VHHHSSVMLIVGEMEQQMVHG 313

[Close]

BLAST of MS012844 vs. ExPASy TrEMBL
Match: A0A5A7TU63 (F-box protein SKIP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003610 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.3e-153
Identity = 277/321 (86.29%), Postives = 292/321 (90.97%), Query Frame = 0


Query: 1   MEIASAATIALSSQPFPIAAIVTFLCFLLALFAAV------HIRRAKALQSVGEGGLSDS 60
           MEI S+ATIALSSQPFPIAAIVTFLCFLLA+F AV      +IRR K+LQS         
Sbjct: 1   MEIVSSATIALSSQPFPIAAIVTFLCFLLAIFVAVRLVSVPYIRRTKSLQS--------E 60

Query: 61  LVGARNCDCTCSLNGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTG 120
            VG RNC+CTCSLNGGVVI G DPRA ITSS S+SMPYLNGR VEVLEKAPVVVTERQTG
Sbjct: 61  SVGTRNCNCTCSLNGGVVIRGLDPRAEITSSTSTSMPYLNGRAVEVLEKAPVVVTERQTG 120

Query: 121 ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVT 180
           ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVT
Sbjct: 121 ASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVT 180

Query: 181 PTNGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAV 240
           P NGWK+YYAATRTIMN+NAQF+NI+R+RSLQAMS FWLNADYVKCIHASGEFFSGYNAV
Sbjct: 181 PINGWKSYYAATRTIMNINAQFYNIIRDRSLQAMSRFWLNADYVKCIHASGEFFSGYNAV 240

Query: 241 IQSWQLAFNWEQGINFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYM 300
           IQSWQ+AFNWEQGINFQVRD RARVL+DMAWVSMKTYVDMDTGPFNVTNIYEFH+GRWYM
Sbjct: 241 IQSWQVAFNWEQGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNIYEFHDGRWYM 300

Query: 301 VHHHSSVMLIDGEVEQQMVHG 316
           VHHHSSVMLI GE+EQQMVHG
Sbjct: 301 VHHHSSVMLIVGEMEQQMVHG 313

[Close]

BLAST of MS012844 vs. TAIR 10
Match: AT4G10925.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 338.6 bits (867), Expect = 5.5e-93
Identity = 162/247 (65.59%), Postives = 189/247 (76.52%), Query Frame = 0


Query: 68  NGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTGASMMEQLVPEITT 127
           NGG    G   R ++T+S                      V + + G SMMEQLVPEITT
Sbjct: 8   NGGTPPMGGGERTTVTTS---------------------TVADDKPGVSMMEQLVPEITT 67

Query: 128 HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATR 187
           HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD +TP NGWK YYA TR
Sbjct: 68  HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPVNGWKEYYATTR 127

Query: 188 TIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQG 247
            I++VN +FF I+R+R+LQAM+  WLN+DYVKCIHASGE FSGYN VIQSWQL FNWEQG
Sbjct: 128 AIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCFNWEQG 187

Query: 248 INFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIDGE 307
            +FQV   R R+L+DMAWV+MK Y+++D GPF +TN++EFHNGRW+MVHHHSSVMLID  
Sbjct: 188 FDFQVHTVRTRILTDMAWVTMKAYLNVDGGPFLITNVFEFHNGRWHMVHHHSSVMLIDD- 231

Query: 308 VEQQMVH 315
            +Q +VH
Sbjct: 248 -QQVVVH 231

[Close]

BLAST of MS012844 vs. TAIR 10
Match: AT4G10925.2 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 338.6 bits (867), Expect = 5.5e-93
Identity = 162/247 (65.59%), Postives = 189/247 (76.52%), Query Frame = 0


Query: 68  NGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTGASMMEQLVPEITT 127
           NGG    G   R ++T+S                      V + + G SMMEQLVPEITT
Sbjct: 8   NGGTPPMGGGERTTVTTS---------------------TVADDKPGVSMMEQLVPEITT 67

Query: 128 HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATR 187
           HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD +TP NGWK YYA TR
Sbjct: 68  HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPVNGWKEYYATTR 127

Query: 188 TIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQG 247
            I++VN +FF I+R+R+LQAM+  WLN+DYVKCIHASGE FSGYN VIQSWQL FNWEQG
Sbjct: 128 AIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCFNWEQG 187

Query: 248 INFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIDGE 307
            +FQV   R R+L+DMAWV+MK Y+++D GPF +TN++EFHNGRW+MVHHHSSVMLID  
Sbjct: 188 FDFQVHTVRTRILTDMAWVTMKAYLNVDGGPFLITNVFEFHNGRWHMVHHHSSVMLIDD- 231

Query: 308 VEQQMVH 315
            +Q +VH
Sbjct: 248 -QQVVVH 231

[Close]

BLAST of MS012844 vs. TAIR 10
Match: AT4G10925.3 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 338.6 bits (867), Expect = 5.5e-93
Identity = 162/247 (65.59%), Postives = 189/247 (76.52%), Query Frame = 0


Query: 68  NGGVVIGGSDPRASITSSASSSMPYLNGRVVEVLEKAPVVVTERQTGASMMEQLVPEITT 127
           NGG    G   R ++T+S                      V + + G SMMEQLVPEITT
Sbjct: 8   NGGTPPMGGGERTTVTTS---------------------TVADDKPGVSMMEQLVPEITT 67

Query: 128 HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPTNGWKAYYAATR 187
           HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQD +TP NGWK YYA TR
Sbjct: 68  HALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDGITPVNGWKEYYATTR 127

Query: 188 TIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQLAFNWEQG 247
            I++VN +FF I+R+R+LQAM+  WLN+DYVKCIHASGE FSGYN VIQSWQL FNWEQG
Sbjct: 128 AIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCFNWEQG 187

Query: 248 INFQVRDARARVLSDMAWVSMKTYVDMDTGPFNVTNIYEFHNGRWYMVHHHSSVMLIDGE 307
            +FQV   R R+L+DMAWV+MK Y+++D GPF +TN++EFHNGRW+MVHHHSSVMLID  
Sbjct: 188 FDFQVHTVRTRILTDMAWVTMKAYLNVDGGPFLITNVFEFHNGRWHMVHHHSSVMLIDD- 231

Query: 308 VEQQMVH 315
            +Q +VH
Sbjct: 248 -QQVVVH 231

[Close]

BLAST of MS012844 vs. TAIR 10
Match: AT4G23960.1 (F-box family protein )

HSP 1 Score: 149.8 bits (377), Expect = 3.6e-36
Identity = 68/115 (59.13%), Postives = 88/115 (76.52%), Query Frame = 0


Query: 117 MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFTLEQDTVTPT 176
           M+EQL PE+T +AL YLDY SLC+LSMT+S MRK ANDD  W+ALY ++FT E +  TP 
Sbjct: 1   MIEQLFPEVTCYALRYLDYSSLCQLSMTSSSMRKTANDDVLWRALYFQEFTEETNGGTPV 60

Query: 177 NGWKAYYAATRTIMNVNAQFFNIVRERSLQAMSHFWLNADYVKCIHASGEFFSGY 232
           NGWKA++A T+ +M VN +FF+I+  RSL  M+  WLN+DYVKC + SGE F+GY
Sbjct: 61  NGWKAFFAVTKQVMTVNDKFFSILDSRSLPRMTSLWLNSDYVKCFNGSGELFTGY 115

The following BLAST results are available for this feature:

BLAST of MS012844 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136371.1	5.4e-175	99.05	F-box protein SKIP8-like [Momordica charantia]	[more]
XP_038880969.1	8.6e-157	88.47	F-box protein SKIP8-like [Benincasa hispida]	[more]
KAG7031147.1	3.1e-154	86.60	F-box protein SKIP8 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022942140.1	5.2e-154	86.29	F-box protein SKIP8-like [Cucurbita moschata]	[more]
KAG6600509.1	8.9e-154	86.29	F-box protein SKIP8, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MS012844 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93YV9	7.7e-92	65.59	F-box protein SKIP8 OS=Arabidopsis thaliana OX=3702 GN=SKIP8 PE=1 SV=1	[more]
Q9T0B0	5.1e-35	59.13	Probable F-box protein At4g23960 OS=Arabidopsis thaliana OX=3702 GN=At4g23960 PE...	[more]

BLAST of MS012844 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C3C3	2.6e-175	99.05	F-box protein SKIP8-like OS=Momordica charantia OX=3673 GN=LOC111008096 PE=4 SV=...	[more]
A0A6J1FVP4	2.5e-154	86.29	F-box protein SKIP8-like OS=Cucurbita moschata OX=3662 GN=LOC111447294 PE=4 SV=1	[more]
A0A0A0KX34	5.6e-154	86.29	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G052690 PE=4 ...	[more]
A0A6J1EUJ3	7.3e-154	86.92	F-box protein SKIP8-like OS=Cucurbita moschata OX=3662 GN=LOC111437693 PE=4 SV=1	[more]
A0A5A7TU63	1.3e-153	86.29	F-box protein SKIP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G0...	[more]

BLAST of MS012844 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10925.1	5.5e-93	65.59	Nuclear transport factor 2 (NTF2) family protein	[more]
AT4G10925.2	5.5e-93	65.59	Nuclear transport factor 2 (NTF2) family protein	[more]
AT4G10925.3	5.5e-93	65.59	Nuclear transport factor 2 (NTF2) family protein	[more]
AT4G23960.1	3.6e-36	59.13	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 106..159 e-value: 1.7E-6 score: 29.7
None	No IPR available	GENE3D	3.10.450.50		coord: 180..311 e-value: 6.7E-32 score: 112.3
IPR037401	SnoaL-like domain	PFAM	PF13474	SnoaL_3	coord: 189..302 e-value: 2.0E-26 score: 92.8
IPR044260	F-box protein SKIP8-like	PANTHER	PTHR47124	F-BOX PROTEIN SKIP8	coord: 11..315
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 115..161 score: 8.59666
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 114..188
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 184..302

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012844.1	MS012844.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding