MS012821 (gene) Bitter gourd (TR) v1

Overview


Name	MS012821
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein SEH1
Location	scaffold63: 3713379 .. 3718270 (+)
RNA-Seq Expression	MS012821
Synteny	MS012821

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAATGCTATGGCGAGCTTCGATAAAGGCACCCTCTGCTCAGCTTGGAACTACTCCGCCAGCAGATTAGCCACCGCCTCGGTCGACGGAACCCTCGTCATCTTCGATTCCCCCGATCCTTCTTCTTCATCCACGTCCCTCACTCGCACTTCAAACTTTAAGGTTTTTTTTTTTAGTTTCGTGTTACTTCACTTGGACTTCATTATCCTAGTTTGAATTCATGCTTGCTTACACCTGATCGTACTTCTAAATGTTTCTTAGTTTACATATTTTAAATGGGGGACATCTCAGAATTTTGGAGATACATCAATCATGTTATTAATTTCTGGCTTAGGTTAGATTTATAGAGCCTTTATGTGAGCTGCGAGTCCGTAGGTCAAGAGAGAGAAGGAAAATATGAGTATAGAGGGTGTATTGAGGAGTGAATTAGTGGGGGTGGAGGAGTGGATTGGGTCATTGACGGCTGAAGAAGAAAATTATAGATATAAAGCTTAATTTCATGCTATGCCGTCATTTTGGTCATATCATACTTCTTACTAATCGGAATAATTGTAATCCAAAGCTAATTGAGGGAATATTTAAAGTCAACAAGGAAGTTGTTTCATTGTGTTATTTTCTTGATAGAGCCAAGGGCTTTAGGCTTGGGAAAATTTTTATGGTGAAAAGGCAATGTGCACTTGTAAGATCGTATGTGGGATAGGAATTAAATAGGCAGAAAGCTTGCTGATACATCATTGACAGATTCATCAATTTTGACACCTCTGGTACTAACACTTTAGAAGCTCATAGATCAATTTTGAGTTCTGATTGGATCTTTCTCTCTGAGACTTTGGCCTACTAAAATTTTCTCCAAAAAATCTTTTACTGAGTGAGAGTTGCTCCAGGCTTAACCAAGGTGAAACTTGAAAATGTTAACAATACCTGGCCTTGGGAATTTGAGCTTGATAAACCATGAAAGAAACTACTGTATGGTGATTTTAGCATAAAAAGGCTTGTTTTTTCCTTCTTCTCTTTTCCAATGACTATAAGTTCTGAAAACATTAATATTTTCATCTTTCTAGGCACATGAGGCTGCCATTTTAAAGATAGTTTGGGTTCCTCCAGAGTATGGTGATTCAGTTGCATGCATTTGTTCAGATGGAACTTCATCATTGTGGGAGGAGGTTGTTGAAGGTAATCATTTTGTTTTTGTTGACCATGGGTCTTCTCTCCAATTTTATTGTTAGATTACCTACGTCTATTTATTTAATCTTCTTTTCCCCTTTGCCTGGCCCCTAGTATGGCGCATAAACCTTCATTTGACTACAATTCTTGAAGGGTCCTAATCATTGTGTGATTACATTGCATGTTTCTGGTTTCCAGATGCCCAGCCTCTACAGTGGAAGCTATGCAAACGCTTTAAAAGTAATTCAGCCCAAATGCTAGACATCCAATTTGGAAATTCGTCCTCTGGTCTGAAAATGGTAAATGATGATATTTATTCTGATTTTCTTTCTATATATATATCCTGAAGTGCCATTAATGGTGGGATGATGCCTGTGTTATTTTCTGTTTATGTTGCAATTTCTGTTGATTTTTAACGCATAAATTTACTTCATTTTTAATAACTTTGGAACATAACACAGCTTCGTTTTCTCCCTCCATCCTGAGAAATTGAAAGGATTTATTTGAGTATAAAATGTGATAATGGGATCAATAATAACTCACTTTGGTTTGTACAAATATTTTCTGATCGTTTCATTTTCTTTACATTTTGTGGTGTTCAGGACAACTTATTTCCTTTATATATATATAAAAAAAACCCTTAACATTTTAAATTGGTTGAGTTTTTTGCAATCTCTTGTAGTATGCTCCAAATGCATGATATCGCATATAGAAAATTCATTTATGTTATTTTTTTTTTGCTTTTATTTATTTATTTTATTTTACAGATTGCTGCATTTTCAGATGGCCATGTAAAAGTTTATGAGCTTATGGATCCTTTGGATTTGAAGAATTGGCAACTCCAGGTGATCAATCTTTTTATCGTTTATCTTTCTTTTTTTATTATTTATTTTTATTATTATTATTATTTTTAATTTATAATTGGTTTTTNNNNNNNNNNNNNNNNNTAATTGGGAGTCGGAGCTTTACTCCCCTGTACTCAGGAGCACCCACGCTCGCTCCAAGGCCCGGACTCAAGAGATATCAAGGGTTTCTGGTATTAAACTCACTGGAACGTTTGAACATGAGATCTCTAAGTCGGTATGACGAAGCGATTCAAGCTCTTGCATACTGGACTACCCCTTGGGGCTAATTTTTTTTTTTTTTTTTTTATTAGGCTGCGGAAGTTATATTTGAATAACTTATTGCTGTGTTACCTTGTAATTTGTATAGAAAAATATGCTAATTCTTTTTCACATTGGTCAAACTTCAATCAATTGAATTTCTCATTTTATAATAAAGGAAACAGACTTTTTCTTTTCCTTAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAATCAAAAAAAAAAAAAAAAAAAAAATTCAATTCTCTATCTTTTTAACCTTCTGATGAGTTAACATCTATATTCCTATGTTTTAATGTTCCTCCCTAGGGAGGAACAAAAAAACTTCAACTTTCAACGACTCCAAGGAATCTTTCTCCTCCTTTTTGAATTATGTTCTCTTTTTGCCTCTTTATTGGTGTAAATGCAAGCATCCCTTATCTGAACATAGTCTTTCTATACTTTTGGCCAAATGAATGAATTTTTTGTAACTCTATTTTTAGGCTCTTGGGTTCCCCCTCTTTTGTAATATTTGAGCTATCAATGAAATACATGTTTCAGCTAAGGAAAAAAAGAAGTCCCTCTTTGTCAAGAATTCCATAATCATGTAACTATATTATTGGACATGGATATTTGTGTACTTTTCTGGTGACCTGTCCACTATTCATTGTGTTTTAGTTCTACCACTATGTAAGAGCCCTCTGCAGTCGATGGTCTTTCGAACTATTCCTGTCTTATGGGTTGCTTGAATTTTGACGTACAATCCTTTGTATTTCATTGTTGGAAGATTGTGCTTAGAGAATATGGAAATCTCTTCCTTCCCTCACCTCTATTAAAAGGGGAAAAAGTGTGGTGTGTGTGCACACATGCATAATCTCATCTCAAAGGAAGTGTGAGGAAGTGTGTAACTTGGTCCTTTACTATGAAGTATCTGAAAAATAAACACATCATGAATACCTAGCTAGTTTTGTGATATTCATTTAGAAACCTATATGAGCGCCATTTACTGAGTTTTAGGCATATATAAACATCATCGTTTCTTTCCTTCGGTGTTAAATGAGGTTGAGGACCAAGGTGGTCTTTTAAATCTCAGGTGCTCTAACTTTATAGAGCTATTAGATGCTTTATCTTCTTCAAACTACCGAGTGAATAATGACATTTTAAATCATTTTGACTCCTATTTCTACTTTCGTTCAGGCTGAATTTCAGAATGTTATTGATTCCATTTCTACGGTTAGGAAAGCTTCTTGCTTATCTGCAAGTATATCTTGGAATCCACATCGAGGTGAAAGACAACAATCGAGCTTTGTTTTGGCTTTAAATTCTAATACTCCACAGCTTAATTCTGCCAAGGTATTCCAAGTTCTTCTGGTCCTGTTACTGCAATGAAAATTGATGCAGCCAGCTACTCCCAGCTTATTGGTCTGTCTAACTTGATCGTACTAGCTTTAAAAATTGCATGCCACGGTTAATATGGTATTTGTCCTCCACAGGTTTGGGAGTTTGATCAGGCTCATCAAAGATGGCTTCCTGTTGCAGAGTTGGCTTTGCCTGCAGACAAAGGCGATGAGGTTTATGCTGTTGCGTGGGCACAAAATATTGGAAGGTAACGAACTAATTTCTAAAGGGATTGCATACAATAGGTGTATCTGTGCCATGTTAAAACTTTAAAACTCATTGGTTCAGCAAATAAATCCCTTGATTACTAGGCATCTGTATTTGATTATGACAAGTTTGATAGACTATTTTGATTAACTCTTTCTTTGCAGCCAACTCGTAGTCTAGAAACTGGTAGCTCTTTTATTGCTGGTTTTTATCATCTTGTAGTCCTTAAATTTCTTTCATGTTTCTACAAACTTCCAGGGGTAATACCTGATTACTTTTAGAAAGGGCCACCCCCGTGAGTCTTGATATAACCAAACTCATTCACATGTTTACTTAAAATCCTTAAAAAATTTGTAACCTTCTTTTTCGCAAGCTTAAATAATAATGGTATTAATCGTTGTTGGGGTGCATTTTAGGCCATATGAGGTAATAGCTGTTGCAACCCAGAAAGGTATTGCAATATGGCACCTCGGATCCAATCCTGACATGGATGGAAGGCTCTCAACAGAAAGAGTTGCTCTGCTTTCTGGGCATAACGGCGAGGTATGTCTTCAAAATTTTGTTCTGTTCTCTCATTCCCCTTTCTTTTCTTATTTATTTCTTGAATATCCAAAGACTGAATTTGAAACAAGAGAATCACCTGGTGTAGAGCGAGAAGATTCATTTGAATCCATGTCAATGGAATCTTATTAAATAAATATGCAGATGACCCCTTATATAGTTGTCTGCAAAGTGCAAACTTTGCTAGGACTAGGATTTAGTTAGTAATTGGTATGGGTCTATGAACTGCATGTTTTAGATTTTTGTTCTGTTTGGATTATCCTTAGATAGGAGGGAAGAGGTGGGTAGTTAATTGACGATCATGTTTTCACTTGCACTGTCAGGTGTGGGAGATGGAGTGGGACATGGGTGGTATGACATTAGCATCAACAGGAAAGGACGGGATGGTTCGGTTATGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCT

mRNA sequence

ATGGAGAATGCTATGGCGAGCTTCGATAAAGGCACCCTCTGCTCAGCTTGGAACTACTCCGCCAGCAGATTAGCCACCGCCTCGGTCGACGGAACCCTCGTCATCTTCGATTCCCCCGATCCTTCTTCTTCATCCACGTCCCTCACTCGCACTTCAAACTTTAAGGCACATGAGGCTGCCATTTTAAAGATAGTTTGGGTTCCTCCAGAGTATGGTGATTCAGTTGCATGCATTTGTTCAGATGGAACTTCATCATTGTGGGAGGAGGTTGTTGAAGATGCCCAGCCTCTACAGTGGAAGCTATGCAAACGCTTTAAAAGTAATTCAGCCCAAATGCTAGACATCCAATTTGGAAATTCGTCCTCTGGTCTGAAAATGATTGCTGCATTTTCAGATGGCCATGTAAAAGTTTATGAGCTTATGGATCCTTTGGATTTGAAGAATTGGCAACTCCAGGCTGAATTTCAGAATGTTATTGATTCCATTTCTACGGTTAGGAAAGCTTCTTGCTTATCTGCAAGTATATCTTGGAATCCACATCGAGGTGAAAGACAACAATCGAGCTTTGTTTTGGCTTTAAATTCTAATACTCCACAGCTTAATTCTGCCAAGGTTTGGGAGTTTGATCAGGCTCATCAAAGATGGCTTCCTGTTGCAGAGTTGGCTTTGCCTGCAGACAAAGGCGATGAGGTTTATGCTGTTGCGTGGGCACAAAATATTGGAAGGCCATATGAGGTAATAGCTGTTGCAACCCAGAAAGGTATTGCAATATGGCACCTCGGATCCAATCCTGACATGGATGGAAGGCTCTCAACAGAAAGAGTTGCTCTGCTTTCTGGGCATAACGGCGAGGTGTGGGAGATGGAGTGGGACATGGGTGGTATGACATTAGCATCAACAGGAAAGGACGGGATGGTTCGGTTATGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCT

Coding sequence (CDS)

ATGGAGAATGCTATGGCGAGCTTCGATAAAGGCACCCTCTGCTCAGCTTGGAACTACTCCGCCAGCAGATTAGCCACCGCCTCGGTCGACGGAACCCTCGTCATCTTCGATTCCCCCGATCCTTCTTCTTCATCCACGTCCCTCACTCGCACTTCAAACTTTAAGGCACATGAGGCTGCCATTTTAAAGATAGTTTGGGTTCCTCCAGAGTATGGTGATTCAGTTGCATGCATTTGTTCAGATGGAACTTCATCATTGTGGGAGGAGGTTGTTGAAGATGCCCAGCCTCTACAGTGGAAGCTATGCAAACGCTTTAAAAGTAATTCAGCCCAAATGCTAGACATCCAATTTGGAAATTCGTCCTCTGGTCTGAAAATGATTGCTGCATTTTCAGATGGCCATGTAAAAGTTTATGAGCTTATGGATCCTTTGGATTTGAAGAATTGGCAACTCCAGGCTGAATTTCAGAATGTTATTGATTCCATTTCTACGGTTAGGAAAGCTTCTTGCTTATCTGCAAGTATATCTTGGAATCCACATCGAGGTGAAAGACAACAATCGAGCTTTGTTTTGGCTTTAAATTCTAATACTCCACAGCTTAATTCTGCCAAGGTTTGGGAGTTTGATCAGGCTCATCAAAGATGGCTTCCTGTTGCAGAGTTGGCTTTGCCTGCAGACAAAGGCGATGAGGTTTATGCTGTTGCGTGGGCACAAAATATTGGAAGGCCATATGAGGTAATAGCTGTTGCAACCCAGAAAGGTATTGCAATATGGCACCTCGGATCCAATCCTGACATGGATGGAAGGCTCTCAACAGAAAGAGTTGCTCTGCTTTCTGGGCATAACGGCGAGGTGTGGGAGATGGAGTGGGACATGGGTGGTATGACATTAGCATCAACAGGAAAGGACGGGATGGTTCGGTTATGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCT

Protein sequence

MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSAQMLDIQFGNSSSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLALNSNTPQLNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS

Homology

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BLAST of MS012821 vs. NCBI nr
Match: XP_022136602.1 (protein SEH1 [Momordica charantia])

HSP 1 Score: 662.1 bits (1707), Expect = 2.4e-186
Identity = 323/327 (98.78%), Postives = 324/327 (99.08%), Query Frame = 0


Query: 1   MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAA 60
           ME+AMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAA
Sbjct: 1   MESAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAA 60

Query: 61  ILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSAQMLDIQFGNS 120
           ILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSAQMLDIQFGNS
Sbjct: 61  ILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSAQMLDIQFGNS 120

Query: 121 SSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
           SSGLKMIAAFS  HVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPH
Sbjct: 121 SSGLKMIAAFSHCHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180

Query: 181 RGERQQSSFVLALNSNTPQLNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNI 240
           RGERQQSSFVLALNSNTPQLNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNI
Sbjct: 181 RGERQQSSFVLALNSNTPQLNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNI 240

Query: 241 GRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST 300
           GRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 328
           GKDGMVRLWQSNLNGVWHQ AAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQLAAFEPTS 327

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BLAST of MS012821 vs. NCBI nr
Match: XP_008451932.1 (PREDICTED: protein SEH1 [Cucumis melo])

HSP 1 Score: 620.2 bits (1598), Expect = 1.0e-173
Identity = 300/327 (91.74%), Postives = 315/327 (96.33%), Query Frame = 0


Query: 1   MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAA 60
           ME AMA+FDKGTLCSAWN+S+SRLATAS DGTLVIFDSP PSSSSTSLTRTSNFKAHEAA
Sbjct: 1   MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAA 60

Query: 61  ILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSAQMLDIQFGNS 120
           I KIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPL+WKLCK FKSNS+Q+LD+QFGNS
Sbjct: 61  ITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWKLCKLFKSNSSQILDLQFGNS 120

Query: 121 SSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
           SSGLKMIAAFSDG++KVYELMDPLDLK+WQLQAEFQNVIDSISTVRK+SC SASISWNPH
Sbjct: 121 SSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPH 180

Query: 181 RGERQQSSFVLALNSNTPQLNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNI 240
           RGE QQSSFVLA +SNTPQLNSAKVWEFDQAHQRWLPVAELAL A+KGDEVYAVAWAQNI
Sbjct: 181 RGE-QQSSFVLAFSSNTPQLNSAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNI 240

Query: 241 GRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST 300
           GRPYEVIAVATQ+GIAIW LG +PD DGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 328
           GKDGMVRLWQSNLNGVWHQHAAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 326

[Close]

BLAST of MS012821 vs. NCBI nr
Match: XP_038897768.1 (protein SEH1 [Benincasa hispida])

HSP 1 Score: 618.6 bits (1594), Expect = 3.0e-173
Identity = 299/327 (91.44%), Postives = 309/327 (94.50%), Query Frame = 0


Query: 1   MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAA 60
           ME AMA+  KGTLCSAWNYSA+RLAT S DGTL+IFDSPDPSSSSTSLTRTSNFK HEAA
Sbjct: 1   MEKAMATLGKGTLCSAWNYSANRLATGSADGTLLIFDSPDPSSSSTSLTRTSNFKVHEAA 60

Query: 61  ILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSAQMLDIQFGNS 120
           I+KIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCK FK NS+Q+LDIQFGNS
Sbjct: 61  IIKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKHFKCNSSQILDIQFGNS 120

Query: 121 SSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
           SSGLKMIAAFSDGH+KVYELMDPLDLK+WQLQAEFQNVIDSISTVRKA C SASISWNPH
Sbjct: 121 SSGLKMIAAFSDGHIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAFCSSASISWNPH 180

Query: 181 RGERQQSSFVLALNSNTPQLNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNI 240
           RGE QQ SFVLA +SNTPQLNSAKVWEFDQAHQRWLPVAELAL ADKGDEVYAVAWAQNI
Sbjct: 181 RGE-QQPSFVLAFSSNTPQLNSAKVWEFDQAHQRWLPVAELALTADKGDEVYAVAWAQNI 240

Query: 241 GRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST 300
           GRPYEVIAVATQKGIAIW LG +PD DGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQKGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 328
           GKDGMVRLWQSNLNGVWHQHA FEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQHATFEPTS 326

[Close]

BLAST of MS012821 vs. NCBI nr
Match: XP_023547085.1 (protein SEH1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 616.3 bits (1588), Expect = 1.5e-172
Identity = 297/327 (90.83%), Postives = 312/327 (95.41%), Query Frame = 0


Query: 1   MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAA 60
           ME AMA+FDKGT+CSAWNYSASRL T S DGT+VIFDS DPSSSSTSLTRTSNFK HEAA
Sbjct: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKVHEAA 60

Query: 61  ILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSAQMLDIQFGNS 120
           I KIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWKL K FKSNS+Q+LDIQFGNS
Sbjct: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQILDIQFGNS 120

Query: 121 SSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
           SSGLKMIAAFSDG+VKVYELMDPLDLK+WQLQAEFQNVIDSISTVRKA+CLSASISWNP+
Sbjct: 121 SSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180

Query: 181 RGERQQSSFVLALNSNTPQLNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNI 240
           RGERQQSSFVLA +S+TPQL+SAKVWEFDQAHQRWLPVAELAL ADKGD VYAVAWAQNI
Sbjct: 181 RGERQQSSFVLAFHSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNI 240

Query: 241 GRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST 300
           GRPYEVIAVATQKGIAIW LG NPD DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 328
           GKDGMVRLWQSNLNGVWHQHAAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 327

[Close]

BLAST of MS012821 vs. NCBI nr
Match: KAG6600526.1 (Protein SEH1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 616.3 bits (1588), Expect = 1.5e-172
Identity = 296/327 (90.52%), Postives = 312/327 (95.41%), Query Frame = 0


Query: 1   MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAA 60
           ME AMA+FDKGT+CSAWNYSASRL T S DGT+VIFDS DPSSSSTSLTRTSNFKAHEAA
Sbjct: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHEAA 60

Query: 61  ILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSAQMLDIQFGNS 120
           I KIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWKL K FKSNS+Q++DIQFGNS
Sbjct: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQIIDIQFGNS 120

Query: 121 SSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
           SSGLKMIAAFSDG+VKVYELMDPLDLK+WQLQAEFQNVIDSISTVRKA+CLSASISWNP+
Sbjct: 121 SSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180

Query: 181 RGERQQSSFVLALNSNTPQLNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNI 240
           RGERQQSSFVLA  S+TPQL+SAKVWEFDQAHQRWLPVAELAL ADKGD VYAVAWAQNI
Sbjct: 181 RGERQQSSFVLAFRSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNI 240

Query: 241 GRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST 300
           GRPYEVIAVATQKG+AIW LG NPD DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQKGVAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 328
           GKDGMVRLWQSNLNGVWHQHAAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 327

[Close]

BLAST of MS012821 vs. ExPASy Swiss-Prot
Match: Q93VR9 (Protein SEH1 OS=Arabidopsis thaliana OX=3702 GN=SEH1 PE=1 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 1.2e-127
Identity = 207/325 (63.69%), Postives = 264/325 (81.23%), Query Frame = 0


Query: 1   MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAA 60
           M  +MA+ D GT CS+WN S  RLA  S++G L I++S   +SSS++ + TS  +  E++
Sbjct: 1   MAKSMATLDSGTTCSSWNQSGDRLAAGSLNGKLSIYES--STSSSSTFSCTSKVRVSESS 60

Query: 61  ILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSAQMLDIQFGNS 120
           I+KIVW+P EYGD+VAC+C DG+ S+WEE+ EDA  L+WKLCK  K+ S+Q+LD+QFG S
Sbjct: 61  IVKIVWLPSEYGDAVACVCEDGSLSIWEELSEDAHGLEWKLCKSMKNKSSQVLDVQFGVS 120

Query: 121 SSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
              LKM+AA+SDG+++V+EL++PL+LKNWQLQAEFQNVIDS+ST+ K S LSAS+SWNP 
Sbjct: 121 RKSLKMVAAYSDGYLRVFELLNPLELKNWQLQAEFQNVIDSLSTLGKPSSLSASVSWNPM 180

Query: 181 RGERQQSSFVLALNSNTPQLNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNI 240
           +GE Q+ SFVLA NS++P LNS+K+WEFD+AH RWL VAELALP DKGD VYA++WA NI
Sbjct: 181 KGEEQEPSFVLAFNSDSPHLNSSKIWEFDEAHNRWLAVAELALPEDKGDPVYALSWAPNI 240

Query: 241 GRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST 300
           GRPYEV+AVAT KGI IWH+G  PD++GRL  ++V+ LSGH GEVW+MEWDM GMTLAST
Sbjct: 241 GRPYEVVAVATHKGIGIWHVGLAPDLEGRLPVKKVSSLSGHQGEVWQMEWDMSGMTLAST 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEP 326
           G DGMV+LWQSNLNG WH+ A  EP
Sbjct: 301 GSDGMVKLWQSNLNGEWHEQATLEP 323

[Close]

BLAST of MS012821 vs. ExPASy Swiss-Prot
Match: C1BK83 (Nucleoporin SEH1 OS=Osmerus mordax OX=8014 GN=seh1l PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.9e-34
Identity = 88/313 (28.12%), Postives = 152/313 (48.56%), Query Frame = 0


Query: 16  AWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSV 75
           ++++   R+AT S D ++ ++D  D    +     T+++K H  ++ ++ W  PE+G  +
Sbjct: 19  SYDFHGRRMATCSSDQSVKVWDKSDNGEWNC----TASWKTHSGSVWRVTWAHPEFGQVL 78

Query: 76  ACICSDGTSSLWEEVVEDAQPLQ-----WKLCKRFKSNSAQMLDIQFGNSSSGLKMIAAF 135
           A    D T+++WEE+V ++   Q     W        +   + D++F     GL +    
Sbjct: 79  ASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCS 138

Query: 136 SDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFV 195
           +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP           
Sbjct: 139 ADGVVRIYEAPDVMNLSQWSLQHE-------ISCKLSCSC----ISWNPSSSRAHSPMIA 198

Query: 196 LAL-NSNTPQLNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAV 255
           +   +SNT      +++E+ +  +++  V  L       D V+ +A+A N+GR + V+A+
Sbjct: 199 VGSDDSNTAYSGKVQIYEYVENTRKYAKVETLMTVT---DPVHDIAFAPNLGRSFHVLAI 258

Query: 256 ATQKGIAIWHL-----GSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKDG 315
           AT K + I+ L      S+     +L  +  A   GHN +VW + W++    LAS+G DG
Sbjct: 259 AT-KDVRIFKLIPMRKESSSSGPTKLEVQLQAQFDGHNSQVWRVSWNITSTLLASSGDDG 312

Query: 316 MVRLWQSNLNGVW 318
            VRLW++N    W
Sbjct: 319 CVRLWKANYMDNW 312

[Close]

BLAST of MS012821 vs. ExPASy Swiss-Prot
Match: Q6GNF1 (Nucleoporin SEH1-B OS=Xenopus laevis OX=8355 GN=seh1l-b PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.1e-32
Identity = 83/314 (26.43%), Postives = 152/314 (48.41%), Query Frame = 0


Query: 16  AWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSV 75
           ++++   R+AT S D ++ ++D     S + +   T+++K H  ++ ++ W  PE+G  +
Sbjct: 19  SFDFHGRRMATCSSDQSVKVWD----KSENVNWHCTASWKTHSGSVWRVTWAHPEFGQVL 78

Query: 76  ACICSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSAQMLDIQFGNSSSGLKMIAAF 135
           A    D T+++WEE+V ++         W        +   + D++F     GL +    
Sbjct: 79  ASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCS 138

Query: 136 SDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFV 195
           +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP           
Sbjct: 139 ADGVVRIYEAPDVMNLSQWSLQHE-------ISCKLSCSC----ISWNPSSSRAHSPMIA 198

Query: 196 LALNSNTPQ-LNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAV 255
           +  + ++P  +   +++E+++  +++     L       D V+ +A+A N+GR + ++AV
Sbjct: 199 VGSDDSSPNIMGKVQIYEYNENTRKYAKAETL---MSVSDPVHDIAFAPNLGRSFHILAV 258

Query: 256 ATQKGIAIWHLG------SNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD 315
           AT K + I+ +       S+     +     VA    HN +VW + W++ G  LAS+G D
Sbjct: 259 AT-KDVRIFTMKPLRKELSSSGGVTKFENHTVAQFDNHNSQVWRVSWNITGTVLASSGDD 313

Query: 316 GMVRLWQSNLNGVW 318
           G VRLW++N    W
Sbjct: 319 GTVRLWKANYMDNW 313

[Close]

BLAST of MS012821 vs. ExPASy Swiss-Prot
Match: Q4FZW5 (Nucleoporin SEH1-A OS=Xenopus laevis OX=8355 GN=seh1l-a PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.4e-32
Identity = 83/314 (26.43%), Postives = 152/314 (48.41%), Query Frame = 0


Query: 16  AWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSV 75
           ++++   R+AT S D ++ ++D     S + +   T+++K H  ++ ++ W  PE+G  +
Sbjct: 19  SFDFHGRRMATCSSDQSVKVWD----KSENGNWHCTASWKTHSGSVWRVTWAHPEFGQVL 78

Query: 76  ACICSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSAQMLDIQFGNSSSGLKMIAAF 135
           A    D T+++WEE+V ++         W        +   + D++F     GL +    
Sbjct: 79  ASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCS 138

Query: 136 SDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFV 195
           +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP           
Sbjct: 139 ADGVVRIYEAPDVMNLSQWSLQHE-------ISCKLSCSC----ISWNPSSSRAHSPMIA 198

Query: 196 LALNSNTPQ-LNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAV 255
           +  + ++P  +   +++E+++  +++     L       D V+ +A+A N+GR + ++AV
Sbjct: 199 VGSDDSSPNIMGKVQIYEYNENTRKYAKAETL---MSVSDPVHDIAFAPNLGRSFHILAV 258

Query: 256 ATQKGIAIWHLG------SNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD 315
           AT K + I+ +       S+     +     VA    HN +VW + W++ G  LAS+G D
Sbjct: 259 AT-KDVRIFTMKPLRKELSSSGGVTKFEIHTVAQFDNHNSQVWRVSWNITGTVLASSGDD 313

Query: 316 GMVRLWQSNLNGVW 318
           G VRLW++N    W
Sbjct: 319 GTVRLWKANYMDNW 313

[Close]

BLAST of MS012821 vs. ExPASy Swiss-Prot
Match: Q5U4Y8 (Nucleoporin SEH1 OS=Xenopus tropicalis OX=8364 GN=seh1l PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.2e-32
Identity = 83/314 (26.43%), Postives = 151/314 (48.09%), Query Frame = 0


Query: 16  AWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAAILKIVWVPPEYGDSV 75
           ++++   R+AT S D ++ ++D     S +     T+++K H  ++ ++ W  PE+G  +
Sbjct: 19  SFDFHGRRMATCSSDQSVKVWD----KSENGDWHCTASWKTHSGSVWRVTWAHPEFGQVL 78

Query: 76  ACICSDGTSSLWEEVVEDAQ-----PLQWKLCKRFKSNSAQMLDIQFGNSSSGLKMIAAF 135
           A    D T+++WEE+V ++         W        +   + D++F     GL +    
Sbjct: 79  ASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCS 138

Query: 136 SDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFV 195
           +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP           
Sbjct: 139 ADGVVRIYEAPDVMNLSQWSLQHE-------ISCKLSCSC----ISWNPSSSRAHSPMIA 198

Query: 196 LALNSNTPQ-LNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNIGRPYEVIAV 255
           +  + ++P  +   +++E+++  +++     L       D V+ +A+A N+GR + ++AV
Sbjct: 199 VGSDDSSPNIMGKVQIYEYNENTRKYAKAETL---MSVSDPVHDIAFAPNLGRSFHILAV 258

Query: 256 ATQKGIAIWHLG------SNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLASTGKD 315
           AT K + I+ +       S+     +     VA    HN +VW + W++ G  LAS+G D
Sbjct: 259 AT-KDVRIFTMKPLRKELSSSGGVTKFEIHTVAQFDNHNSQVWRVSWNITGTVLASSGDD 313

Query: 316 GMVRLWQSNLNGVW 318
           G VRLW++N    W
Sbjct: 319 GTVRLWKANYMDNW 313

[Close]

BLAST of MS012821 vs. ExPASy TrEMBL
Match: A0A6J1C5X6 (protein SEH1 OS=Momordica charantia OX=3673 GN=LOC111008268 PE=3 SV=1)

HSP 1 Score: 662.1 bits (1707), Expect = 1.2e-186
Identity = 323/327 (98.78%), Postives = 324/327 (99.08%), Query Frame = 0


Query: 1   MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAA 60
           ME+AMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAA
Sbjct: 1   MESAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAA 60

Query: 61  ILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSAQMLDIQFGNS 120
           ILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSAQMLDIQFGNS
Sbjct: 61  ILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSAQMLDIQFGNS 120

Query: 121 SSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
           SSGLKMIAAFS  HVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPH
Sbjct: 121 SSGLKMIAAFSHCHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180

Query: 181 RGERQQSSFVLALNSNTPQLNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNI 240
           RGERQQSSFVLALNSNTPQLNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNI
Sbjct: 181 RGERQQSSFVLALNSNTPQLNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNI 240

Query: 241 GRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST 300
           GRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 328
           GKDGMVRLWQSNLNGVWHQ AAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQLAAFEPTS 327

[Close]

BLAST of MS012821 vs. ExPASy TrEMBL
Match: A0A1S3BTS7 (protein SEH1 OS=Cucumis melo OX=3656 GN=LOC103493086 PE=3 SV=1)

HSP 1 Score: 620.2 bits (1598), Expect = 5.1e-174
Identity = 300/327 (91.74%), Postives = 315/327 (96.33%), Query Frame = 0


Query: 1   MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAA 60
           ME AMA+FDKGTLCSAWN+S+SRLATAS DGTLVIFDSP PSSSSTSLTRTSNFKAHEAA
Sbjct: 1   MEKAMATFDKGTLCSAWNHSSSRLATASSDGTLVIFDSPHPSSSSTSLTRTSNFKAHEAA 60

Query: 61  ILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSAQMLDIQFGNS 120
           I KIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPL+WKLCK FKSNS+Q+LD+QFGNS
Sbjct: 61  ITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLEWKLCKLFKSNSSQILDLQFGNS 120

Query: 121 SSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
           SSGLKMIAAFSDG++KVYELMDPLDLK+WQLQAEFQNVIDSISTVRK+SC SASISWNPH
Sbjct: 121 SSGLKMIAAFSDGYIKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKSSCSSASISWNPH 180

Query: 181 RGERQQSSFVLALNSNTPQLNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNI 240
           RGE QQSSFVLA +SNTPQLNSAKVWEFDQAHQRWLPVAELAL A+KGDEVYAVAWAQNI
Sbjct: 181 RGE-QQSSFVLAFSSNTPQLNSAKVWEFDQAHQRWLPVAELALTAEKGDEVYAVAWAQNI 240

Query: 241 GRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST 300
           GRPYEVIAVATQ+GIAIW LG +PD DGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQRGIAIWRLGLSPDTDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 328
           GKDGMVRLWQSNLNGVWHQHAAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 326

[Close]

BLAST of MS012821 vs. ExPASy TrEMBL
Match: A0A6J1FTY0 (protein SEH1 OS=Cucurbita moschata OX=3662 GN=LOC111447274 PE=3 SV=1)

HSP 1 Score: 615.5 bits (1586), Expect = 1.2e-172
Identity = 296/327 (90.52%), Postives = 312/327 (95.41%), Query Frame = 0


Query: 1   MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAA 60
           ME AMA+FDKGT+CSAWNYSASRL T S DGT+VIFDS DPSSSSTSLTRTSNFKAHEAA
Sbjct: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHEAA 60

Query: 61  ILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSAQMLDIQFGNS 120
           I KIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWKL K FKSNS+Q++DIQFGNS
Sbjct: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQIIDIQFGNS 120

Query: 121 SSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
           SSGLKMIAAFSDG++KVYELMDPLDLK+WQLQAEFQNVIDSISTVRKA+CLSASISWNP+
Sbjct: 121 SSGLKMIAAFSDGNLKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180

Query: 181 RGERQQSSFVLALNSNTPQLNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNI 240
           RGERQQSSFVLA  S+TPQL+SAKVWEFDQAHQRWLPVAELAL ADKGD VYAVAWAQNI
Sbjct: 181 RGERQQSSFVLAFRSDTPQLDSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNI 240

Query: 241 GRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST 300
           GRPYEVIAVATQKGIAIW LG NPD DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 328
           GKDGMVRLWQSNLNGVWHQHAAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 327

[Close]

BLAST of MS012821 vs. ExPASy TrEMBL
Match: A0A0A0KWZ8 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G051460 PE=3 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 3.6e-172
Identity = 296/327 (90.52%), Postives = 311/327 (95.11%), Query Frame = 0


Query: 1   MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAA 60
           ME AMA+F KGTLCSAWNYS++RLATAS DGTLVIFDSP PSSSSTS T TSNFKAHE A
Sbjct: 1   MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVA 60

Query: 61  ILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSAQMLDIQFGNS 120
           I KIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCK FKSNS+Q+LD+QFGNS
Sbjct: 61  ITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKLFKSNSSQILDLQFGNS 120

Query: 121 SSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
           SSGLKMIAAFSDG++KVYELMDPL+LKNWQLQAEFQNVIDSISTVRK+SC SASISWNPH
Sbjct: 121 SSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPH 180

Query: 181 RGERQQSSFVLALNSNTPQLNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNI 240
           RGE QQSSFV+A +SNTPQLNSAKVWEFDQAH RWLPVAELAL A+KGDEVYAVAWAQNI
Sbjct: 181 RGE-QQSSFVIAFSSNTPQLNSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNI 240

Query: 241 GRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST 300
           GRPYEVIAVATQ+GIAIWHLG +PDMDGRLS ERVALLSGHNGEVWEMEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQRGIAIWHLGLSPDMDGRLSRERVALLSGHNGEVWEMEWDMGGMTLAST 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 328
           GKDGMVRLWQSNLNGVWHQHAAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 326

[Close]

BLAST of MS012821 vs. ExPASy TrEMBL
Match: A0A6J1J2X1 (protein SEH1 OS=Cucurbita maxima OX=3661 GN=LOC111480853 PE=3 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 6.2e-172
Identity = 295/327 (90.21%), Postives = 311/327 (95.11%), Query Frame = 0


Query: 1   MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAA 60
           ME AMA+FDKGT+CSAWNYSASRL T S DGT+V+FDS DPSSSSTSLTRTSNFKAHEAA
Sbjct: 1   MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAA 60

Query: 61  ILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSAQMLDIQFGNS 120
           I KIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWKL K FKSNS+Q+LDIQFGNS
Sbjct: 61  IFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSSQILDIQFGNS 120

Query: 121 SSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
           SSGLKMIAAFSDG+VKVYELMDPLDLK+WQLQAEFQNVIDSISTVRKA+CLSASISWNP+
Sbjct: 121 SSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPN 180

Query: 181 RGERQQSSFVLALNSNTPQLNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNI 240
           RGERQQSSFVLA  S+TPQL+SAKVWEFD+AHQRWLPVAELAL ADKGD VYAVAWAQNI
Sbjct: 181 RGERQQSSFVLAFRSDTPQLDSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNI 240

Query: 241 GRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST 300
           GRPYEVIAVATQKGIAIW LG NPD DGRLSTERVALLSGHN EVW+MEWDMGGMTLAST
Sbjct: 241 GRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 328
           GKDGMVRLWQSNLNGVWHQHAAFEPTS
Sbjct: 301 GKDGMVRLWQSNLNGVWHQHAAFEPTS 327

[Close]

BLAST of MS012821 vs. TAIR 10
Match: AT1G64350.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 457.6 bits (1176), Expect = 8.4e-129
Identity = 207/325 (63.69%), Postives = 264/325 (81.23%), Query Frame = 0


Query: 1   MENAMASFDKGTLCSAWNYSASRLATASVDGTLVIFDSPDPSSSSTSLTRTSNFKAHEAA 60
           M  +MA+ D GT CS+WN S  RLA  S++G L I++S   +SSS++ + TS  +  E++
Sbjct: 1   MAKSMATLDSGTTCSSWNQSGDRLAAGSLNGKLSIYES--STSSSSTFSCTSKVRVSESS 60

Query: 61  ILKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKRFKSNSAQMLDIQFGNS 120
           I+KIVW+P EYGD+VAC+C DG+ S+WEE+ EDA  L+WKLCK  K+ S+Q+LD+QFG S
Sbjct: 61  IVKIVWLPSEYGDAVACVCEDGSLSIWEELSEDAHGLEWKLCKSMKNKSSQVLDVQFGVS 120

Query: 121 SSGLKMIAAFSDGHVKVYELMDPLDLKNWQLQAEFQNVIDSISTVRKASCLSASISWNPH 180
              LKM+AA+SDG+++V+EL++PL+LKNWQLQAEFQNVIDS+ST+ K S LSAS+SWNP 
Sbjct: 121 RKSLKMVAAYSDGYLRVFELLNPLELKNWQLQAEFQNVIDSLSTLGKPSSLSASVSWNPM 180

Query: 181 RGERQQSSFVLALNSNTPQLNSAKVWEFDQAHQRWLPVAELALPADKGDEVYAVAWAQNI 240
           +GE Q+ SFVLA NS++P LNS+K+WEFD+AH RWL VAELALP DKGD VYA++WA NI
Sbjct: 181 KGEEQEPSFVLAFNSDSPHLNSSKIWEFDEAHNRWLAVAELALPEDKGDPVYALSWAPNI 240

Query: 241 GRPYEVIAVATQKGIAIWHLGSNPDMDGRLSTERVALLSGHNGEVWEMEWDMGGMTLAST 300
           GRPYEV+AVAT KGI IWH+G  PD++GRL  ++V+ LSGH GEVW+MEWDM GMTLAST
Sbjct: 241 GRPYEVVAVATHKGIGIWHVGLAPDLEGRLPVKKVSSLSGHQGEVWQMEWDMSGMTLAST 300

Query: 301 GKDGMVRLWQSNLNGVWHQHAAFEP 326
           G DGMV+LWQSNLNG WH+ A  EP
Sbjct: 301 GSDGMVKLWQSNLNGEWHEQATLEP 323

The following BLAST results are available for this feature:

BLAST of MS012821 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136602.1	2.4e-186	98.78	protein SEH1 [Momordica charantia]	[more]
XP_008451932.1	1.0e-173	91.74	PREDICTED: protein SEH1 [Cucumis melo]	[more]
XP_038897768.1	3.0e-173	91.44	protein SEH1 [Benincasa hispida]	[more]
XP_023547085.1	1.5e-172	90.83	protein SEH1 [Cucurbita pepo subsp. pepo]	[more]
KAG6600526.1	1.5e-172	90.52	Protein SEH1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MS012821 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93VR9	1.2e-127	63.69	Protein SEH1 OS=Arabidopsis thaliana OX=3702 GN=SEH1 PE=1 SV=1	[more]
C1BK83	9.9e-34	28.12	Nucleoporin SEH1 OS=Osmerus mordax OX=8014 GN=seh1l PE=2 SV=1	[more]
Q6GNF1	1.1e-32	26.43	Nucleoporin SEH1-B OS=Xenopus laevis OX=8355 GN=seh1l-b PE=2 SV=1	[more]
Q4FZW5	2.4e-32	26.43	Nucleoporin SEH1-A OS=Xenopus laevis OX=8355 GN=seh1l-a PE=2 SV=1	[more]
Q5U4Y8	3.2e-32	26.43	Nucleoporin SEH1 OS=Xenopus tropicalis OX=8364 GN=seh1l PE=2 SV=1	[more]

BLAST of MS012821 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C5X6	1.2e-186	98.78	protein SEH1 OS=Momordica charantia OX=3673 GN=LOC111008268 PE=3 SV=1	[more]
A0A1S3BTS7	5.1e-174	91.74	protein SEH1 OS=Cucumis melo OX=3656 GN=LOC103493086 PE=3 SV=1	[more]
A0A6J1FTY0	1.2e-172	90.52	protein SEH1 OS=Cucurbita moschata OX=3662 GN=LOC111447274 PE=3 SV=1	[more]
A0A0A0KWZ8	3.6e-172	90.52	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G...	[more]
A0A6J1J2X1	6.2e-172	90.21	protein SEH1 OS=Cucurbita maxima OX=3661 GN=LOC111480853 PE=3 SV=1	[more]

BLAST of MS012821 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64350.1	8.4e-129	63.69	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 98..139 e-value: 7.9 score: 11.3 coord: 47..88 e-value: 0.94 score: 17.2 coord: 1..37 e-value: 1.8 score: 15.4 coord: 271..310 e-value: 1.3E-5 score: 34.6
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 278..309 e-value: 0.0028 score: 18.4
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 278..310 score: 12.17936
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 9..324 e-value: 7.9E-49 score: 168.5
IPR037597	Nucleoporin Seh1	PANTHER	PTHR11024:SF3	NUCLEOPORIN SEH1	coord: 1..326
IPR037363	Sec13/Seh1 family	PANTHER	PTHR11024	NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER	coord: 1..326
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 278..310 score: 10.15287
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 13..311

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012821.1	MS012821.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1904263	positive regulation of TORC1 signaling
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005198	structural molecule activity