MS012770 (gene) Bitter gourd (TR) v1

Overview
NameMS012770
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A .
Locationscaffold63: 3314797 .. 3317652 (-)
RNA-Seq ExpressionMS012770
SyntenyMS012770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCAAGCTCGGGCGGATTTTTCCACAAAGATAGACAGTCAGATTCCGGGGACATCCCCAAATTCAACTGTTTCCGAGATGCCCACTTGTTCCGTTCTTGAAGATTCCACCAAATCGAAACCTCCGTTGAGACAGACCGAGATTTTCAAAGCCATTGAAGTCGTCGAGAAAGACTCTCTCGCCATAGCTGAGAGCTTCACCTCTCTCTTTGCTTCCCTCCGTTCGGCTCTCTCCGAGGTCACATAGTTTTGGCATCCTATTTCTTTTTGCAGCATTTTCATTAAGTGGGGTCGGTTAGAATGATCGTTCGACTTAGAGCTGAGTTTTTTTGAACTGGAATATACTATCTTCCTGTTTGATTTCCAGGAAAACGAACTTAATCAAAGCTTTAATCTGTAACATTCTTTATTTCATTTCTATCTCTTTGTCTTGCAATACGTACTGCATTGGCGTTTTATCGAATATTGAACTTCAGATTCTTGAGAAAATTTGTCATATTATTATGATATTCCCCACCTTAATTTTTGATTCATGCCACCTATTTGTGTCGCTTTGATATGCTGAAGATGGGATAAAAAAATGCTAAGCCTAATTATCTCCTTCAATGACTGAAAATTTACTACTCTAGCATGAATTGCTGGAGAAATGATTCTGGGTTTCCTCTGGTCAAGCAGTTTATCTGAGTGAAAATAGAATAATCTTGTAGGCCTCCGGCAACTCTATTGATCATATGCATTGCTTCAGTGACGCTGCAGGCTGCCTTCAAGAATCTGGTAAGTGAAAAAATGGATGATTTTGGTTGAAAAGAATGGCTGATTATGATGTCAGTTTAGATGTATCATTGTTGTCTACTATAAGTTGATTGGTCATCTGGGTATTTCTTCCTGTATTACTTAAAATTTGATCTGTACATCATTATGTTCATTATTCTGGTTAAGATGTGATAGTTGAACTTAAGAAGTGACTGCCTTGAGATTGGTTGTTACGTAATTGGCATTTGCGCCAGATTTTTTTATTAAATTTGGAGAGAGATTGGTTGCCATCAGACTCATGAAAATACAGAACGACTTTAATCTAAAACTTATTTGCAAGGTGCACAAACTTTTAGCATTGCATAACTCTAGTCATCGTGTGTCCTTTATGTATGTTCCACAATTAAAAAGGTCATTCTAGATGCCTCGTTTGTCATATCGAATATTGTCTAAGGTTGCTCCTAGAATATTAACAAACATATTTTTTGAATTGATGGTCTTTGACATGAGTTATTTTGATTCTCTCTACCGTGTAGTGCTTGATGCGGCAACAAAGGGTAATCGGTACATTAATTCTTCATTGAGGTATGCTTCAATGCTCATTGACATCTCTTTTGATGATAACCATTAATGCAATTTTTCTATTTTACACCAATTTTAACAGAGATGTTCCTCTAACAAGCTAAGCAATTATGGACTCAATAACTCTTACTTGATAGTTATATAATTTGAGGTCTTTATTCCGATAGTATTATAAAGAAATGGAAGAGTGACATAGGCAGAGAGATTCTAACTTTTGAGAAATATTTATTGATGTAATAATCGAAATTGCAGTTTAGACACTTCAAGAAACTATTTGGTACATGTCTCTTTGCTATTTGAGGAGTAATTCATTGGTTGAGTCCTCTGTCAGTTGAATTGTGTTCATATTTTTTTGAGTTTGGAGAAGTTTTGTGGTTACTTCAGTAGATGCTGGATGACAGTCTCAGGCTACAATTCTGCAAAGGTGTAGCCTGAGATTAATCTGAGACTAGTCCATTATACGTAAATGTGTCTTTTTGTCCTTTTGTTTGTATCGATTATGACTATAATGCACCGTGTTGCAAAGTCAACTCTTTAAGTTACCAGTGTTCTAGAAGTCTTTTAAGGCCTTAAGGTGAGACCCAAATTTGAAGGAAGGAAAAACCTCCCCACTGGCCCAAAGAGTTAAAAATTGCATTGTCGAGAAAACTGATTGTTAAAGTCTTCTGCTACACACCAACACGAGCTTAGTTCAGGGGTGATTGGCACCTCTATCTGACAAAGAGGTCATGAGTTCGAATTCCCCCACCCTTACTTGTACTAAAAAAAAATGTTTCAACTACATAGGAGGACCTTGGGAGACGTTTGAACCGCTTGAAAGCACATGGATCTTGAAGTAGAAGCAAAAGAACATGAGGAAAAAAGATGATCATATGTTCCCTCACCCTTTTGGCAAAGAATACACCAAGTGGGGGAGAAAAGGGATTCTTCTATTCTATTCTATTCTATCCATAGTATTGATCTCATGTTTGGAAAATGTCCCAAAAGAAGAATCTAACATTTTTAGGTATCTTCCACAACCAGACAAACTTTGAAATACCTTATGGAAGACAGTGGATTCTGCCATATAAATGCTTGAACAAGGAAGAGCAAGAAAGTAAGCAGGGTCCAAAATCTAATGTAATATTGTTAATTTTAACTGCTTTACATCTTCATTTCCTTGGTTCATATATCCTTGCCACTATTTTCTAGCATTCTATCTAAACTTTTTAGTGTTACTTGATGTTGATTCTGAGTTATTGAATTGTACGTGTCTTGAAAACCTTGCATTGATGGCCATTGCTTTAACTCTGGACTGTATTTTCTCTGCCTTGCAGATTGAATCAGGAAATGAAAGGCATTGACAATCTAGCTGCTCAGCTGTATCCTTTCCTTTCGTGTCTTTTCCCCACCATATTTCTATTTCATAATTTCTTCTGTTTATCTGCATTACCCAGTTCCTTAATTCTTGCTTAGCAAAGTTCTGAGGAAGAACGTTGACGCTCTAGACTCGGCCGTGAACAAGCTCCTTGATTTTCCA

mRNA sequence

ATGGACCAAGCTCGGGCGGATTTTTCCACAAAGATAGACAGTCAGATTCCGGGGACATCCCCAAATTCAACTGTTTCCGAGATGCCCACTTGTTCCGTTCTTGAAGATTCCACCAAATCGAAACCTCCGTTGAGACAGACCGAGATTTTCAAAGCCATTGAAGTCGTCGAGAAAGACTCTCTCGCCATAGCTGAGAGCTTCACCTCTCTCTTTGCTTCCCTCCGTTCGGCTCTCTCCGAGGCCTCCGGCAACTCTATTGATCATATGCATTGCTTCAGTGACGCTGCAGGCTGCCTTCAAGAATCTGTGCTTGATGCGGCAACAAAGGGTAATCGGTACATTAATTCTTCATTGAGATTGAATCAGGAAATGAAAGGCATTGACAATCTAGCTGCTCAGCTCAAAGTTCTGAGGAAGAACGTTGACGCTCTAGACTCGGCCGTGAACAAGCTCCTTGATTTTCCA

Coding sequence (CDS)

ATGGACCAAGCTCGGGCGGATTTTTCCACAAAGATAGACAGTCAGATTCCGGGGACATCCCCAAATTCAACTGTTTCCGAGATGCCCACTTGTTCCGTTCTTGAAGATTCCACCAAATCGAAACCTCCGTTGAGACAGACCGAGATTTTCAAAGCCATTGAAGTCGTCGAGAAAGACTCTCTCGCCATAGCTGAGAGCTTCACCTCTCTCTTTGCTTCCCTCCGTTCGGCTCTCTCCGAGGCCTCCGGCAACTCTATTGATCATATGCATTGCTTCAGTGACGCTGCAGGCTGCCTTCAAGAATCTGTGCTTGATGCGGCAACAAAGGGTAATCGGTACATTAATTCTTCATTGAGATTGAATCAGGAAATGAAAGGCATTGACAATCTAGCTGCTCAGCTCAAAGTTCTGAGGAAGAACGTTGACGCTCTAGACTCGGCCGTGAACAAGCTCCTTGATTTTCCA

Protein sequence

MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP
Homology
[Close]
BLAST of MS012770 vs. NCBI nr
Match: XP_022136588.1 (uncharacterized protein LOC111008257 isoform X2 [Momordica charantia])

HSP 1 Score: 294.3 bits (752), Expect = 6.2e-76
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0 

Query: 1   MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDS 60
           MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDS
Sbjct: 1   MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDS 60

Query: 61  LAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLRL 120
           LAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLRL
Sbjct: 61  LAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLRL 120

Query: 121 NQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP 156
           NQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP
Sbjct: 121 NQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP 155

[Close]
BLAST of MS012770 vs. NCBI nr
Match: XP_022136587.1 (uncharacterized protein LOC111008257 isoform X1 [Momordica charantia])

HSP 1 Score: 254.6 bits (649), Expect = 5.5e-64
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0 

Query: 1   MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDS 60
           MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDS
Sbjct: 1   MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDS 60

Query: 61  LAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLRL 120
           LAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLRL
Sbjct: 61  LAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLRL 120

Query: 121 NQEMKGIDNLAAQL 135
           NQEMKGIDNLAAQL
Sbjct: 121 NQEMKGIDNLAAQL 134

[Close]
BLAST of MS012770 vs. NCBI nr
Match: XP_023553161.1 (uncharacterized protein LOC111810650 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227.6 bits (579), Expect = 7.2e-56
Identity = 122/157 (77.71%), Postives = 135/157 (85.99%), Query Frame = 0 

Query: 1   MDQARADFSTKID--SQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEK 60
           M+Q+ +D ST I+   QIP TSPNS + E PTCSVLED T+ +  L  TEIFKAI+VVEK
Sbjct: 1   MEQSPSDSSTSIEPGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK 60

Query: 61  DSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSL 120
           DSLAIAESFTSLFASLRS LSE + NSIDHMHCF+DAAG LQESVLDAATKGNRYINSSL
Sbjct: 61  DSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL 120

Query: 121 RLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP 156
           RLNQEMKG+DNLAAQLK+LRKNVD LD AVNKLL+FP
Sbjct: 121 RLNQEMKGMDNLAAQLKILRKNVDELDLAVNKLLNFP 157

[Close]
BLAST of MS012770 vs. NCBI nr
Match: XP_022136589.1 (uncharacterized protein LOC111008257 isoform X3 [Momordica charantia])

HSP 1 Score: 227.3 bits (578), Expect = 9.4e-56
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDS 60
           MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDS
Sbjct: 1   MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDS 60

Query: 61  LAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLR 120
           LAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLR
Sbjct: 61  LAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLR 119

[Close]
BLAST of MS012770 vs. NCBI nr
Match: XP_022931514.1 (uncharacterized protein LOC111437668 [Cucurbita moschata] >KAG6577190.1 hypothetical protein SDJN03_24764, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 226.9 bits (577), Expect = 1.2e-55
Identity = 121/157 (77.07%), Postives = 136/157 (86.62%), Query Frame = 0 

Query: 1   MDQARADFSTKIDS--QIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEK 60
           M+Q+ +D S+ I++  QIP TSPNS + E PTCSVLED T+ +  L  TEIFKAI+VVEK
Sbjct: 1   MEQSPSDSSSSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK 60

Query: 61  DSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSL 120
           DSLAIAESFTSLFASLRS LSE + NSIDHMHCF+DAAG LQESVLDAATKGNRYINSSL
Sbjct: 61  DSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL 120

Query: 121 RLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP 156
           RLNQEMKG+DNLAAQLK+LRKNVD LD AVNKLL+FP
Sbjct: 121 RLNQEMKGMDNLAAQLKILRKNVDELDLAVNKLLNFP 157

[Close]
BLAST of MS012770 vs. ExPASy TrEMBL
Match: A0A6J1C7Z8 (uncharacterized protein LOC111008257 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008257 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.0e-76
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0 

Query: 1   MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDS 60
           MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDS
Sbjct: 1   MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDS 60

Query: 61  LAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLRL 120
           LAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLRL
Sbjct: 61  LAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLRL 120

Query: 121 NQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP 156
           NQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP
Sbjct: 121 NQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP 155

[Close]
BLAST of MS012770 vs. ExPASy TrEMBL
Match: A0A6J1C5W4 (uncharacterized protein LOC111008257 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008257 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.7e-64
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0 

Query: 1   MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDS 60
           MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDS
Sbjct: 1   MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDS 60

Query: 61  LAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLRL 120
           LAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLRL
Sbjct: 61  LAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLRL 120

Query: 121 NQEMKGIDNLAAQL 135
           NQEMKGIDNLAAQL
Sbjct: 121 NQEMKGIDNLAAQL 134

[Close]
BLAST of MS012770 vs. ExPASy TrEMBL
Match: A0A6J1C4R3 (uncharacterized protein LOC111008257 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111008257 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 4.5e-56
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDS 60
           MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDS
Sbjct: 1   MDQARADFSTKIDSQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEKDS 60

Query: 61  LAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLR 120
           LAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLR
Sbjct: 61  LAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSLR 119

[Close]
BLAST of MS012770 vs. ExPASy TrEMBL
Match: A0A6J1EUG1 (uncharacterized protein LOC111437668 OS=Cucurbita moschata OX=3662 GN=LOC111437668 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 5.9e-56
Identity = 121/157 (77.07%), Postives = 136/157 (86.62%), Query Frame = 0 

Query: 1   MDQARADFSTKIDS--QIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEK 60
           M+Q+ +D S+ I++  QIP TSPNS + E PTCSVLED T+ +  L  TEIFKAI+VVEK
Sbjct: 1   MEQSPSDSSSSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK 60

Query: 61  DSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSL 120
           DSLAIAESFTSLFASLRS LSE + NSIDHMHCF+DAAG LQESVLDAATKGNRYINSSL
Sbjct: 61  DSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL 120

Query: 121 RLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP 156
           RLNQEMKG+DNLAAQLK+LRKNVD LD AVNKLL+FP
Sbjct: 121 RLNQEMKGMDNLAAQLKILRKNVDELDLAVNKLLNFP 157

[Close]
BLAST of MS012770 vs. ExPASy TrEMBL
Match: A0A6J1J2E9 (uncharacterized protein LOC111482798 OS=Cucurbita maxima OX=3661 GN=LOC111482798 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.0e-55
Identity = 121/157 (77.07%), Postives = 136/157 (86.62%), Query Frame = 0 

Query: 1   MDQARADFSTKID--SQIPGTSPNSTVSEMPTCSVLEDSTKSKPPLRQTEIFKAIEVVEK 60
           M+Q+ +D S+ I+  SQIP TSPNS + E PTCSVLED T+ +  L  TEIFKAI+VVEK
Sbjct: 1   MEQSPSDSSSSIEAGSQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK 60

Query: 61  DSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAGCLQESVLDAATKGNRYINSSL 120
           +SLAIAESFTSLFASLRS LSE + NSIDHMHCF+DAAG LQESVLDAATKGNRYINSSL
Sbjct: 61  NSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL 120

Query: 121 RLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP 156
           RLNQEMKG+DNLAAQLK+LRKNVD LD AVNKLL+FP
Sbjct: 121 RLNQEMKGMDNLAAQLKILRKNVDELDLAVNKLLNFP 157

[Close]
BLAST of MS012770 vs. TAIR 10
Match: AT4G23330.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2365 (InterPro:IPR019314). )

HSP 1 Score: 154.1 bits (388), Expect = 9.4e-38
Identity = 83/118 (70.34%), Postives = 98/118 (83.05%), Query Frame = 0 

Query: 39  KSKP-PLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAG 98
           +S+P  L Q EI K +  VEKDS AIAESF+SLF SLRS LSEA+G+S+DHM CF +AAG
Sbjct: 30  RSEPSSLNQGEILKTLATVEKDSQAIAESFSSLFVSLRSTLSEATGSSVDHMACFGEAAG 89

Query: 99  CLQESVLDAATKGNRYINSSLRLNQEMKGIDNLAAQLKVLRKNVDALDSAVNKLLDFP 156
            LQE+ LDAATKGNRYINS LRLN+E+KG++NLAA+LK LRKNVD LD+AVNKLL  P
Sbjct: 90  RLQENALDAATKGNRYINSCLRLNEEIKGVENLAARLKHLRKNVDVLDTAVNKLLRPP 147

[Close]
BLAST of MS012770 vs. TAIR 10
Match: AT4G23330.1 (BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1); Has 63 Blast hits to 55 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-23
Identity = 58/83 (69.88%), Postives = 67/83 (80.72%), Query Frame = 0 

Query: 39  KSKP-PLRQTEIFKAIEVVEKDSLAIAESFTSLFASLRSALSEASGNSIDHMHCFSDAAG 98
           +S+P  L Q EI K +  VEKDS AIAESF+SLF SLRS LSEA+G+S+DHM CF +AAG
Sbjct: 30  RSEPSSLNQGEILKTLATVEKDSQAIAESFSSLFVSLRSTLSEATGSSVDHMACFGEAAG 89

Query: 99  CLQESVLDAATKGNRYINSSLRL 121
            LQE+ LDAATKGNRYINS LRL
Sbjct: 90  RLQENALDAATKGNRYINSCLRL 112

The following BLAST results are available for this feature:
BLAST of MS012770 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022136588.16.2e-76100.00uncharacterized protein LOC111008257 isoform X2 [Momordica charantia][more]
XP_022136587.15.5e-64100.00uncharacterized protein LOC111008257 isoform X1 [Momordica charantia][more]
XP_023553161.17.2e-5677.71uncharacterized protein LOC111810650 [Cucurbita pepo subsp. pepo][more]
XP_022136589.19.4e-56100.00uncharacterized protein LOC111008257 isoform X3 [Momordica charantia][more]
XP_022931514.11.2e-5577.07uncharacterized protein LOC111437668 [Cucurbita moschata] >KAG6577190.1 hypothet... [more]
BLAST of MS012770 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS012770 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C7Z83.0e-76100.00uncharacterized protein LOC111008257 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1C5W42.7e-64100.00uncharacterized protein LOC111008257 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1C4R34.5e-56100.00uncharacterized protein LOC111008257 isoform X3 OS=Momordica charantia OX=3673 G... [more]
A0A6J1EUG15.9e-5677.07uncharacterized protein LOC111437668 OS=Cucurbita moschata OX=3662 GN=LOC1114376... [more]
A0A6J1J2E91.0e-5577.07uncharacterized protein LOC111482798 OS=Cucurbita maxima OX=3661 GN=LOC111482798... [more]
BLAST of MS012770 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23330.29.4e-3870.34unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G23330.11.7e-2369.88BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation fa... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 120..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..28
NoneNo IPR availablePANTHERPTHR39708OS07G0483400 PROTEINcoord: 9..153
IPR019314BLOC-1-related complex subunit 6PFAMPF10157BORCS6coord: 12..146
e-value: 1.1E-6
score: 29.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS012770.1MS012770.1mRNA