MS012756 (gene) Bitter gourd (TR) v1

Overview


Name	MS012756
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DUF4228 domain-containing protein
Location	scaffold63: 3182079 .. 3182720 (-)
RNA-Seq Expression	MS012756
Synteny	MS012756

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAACTGCTTATTCGGCGGTGGCTCCGGCCAGATTCAGGGGAAGATCAAAGTCATAACCGCCAACGGGGGGATCATGGAGTTGGGTTCTCCGATCACCGTCGGGTGCATCGCCGACGAGTTCCCCGGGTACGGGATATTCCGGAGCCACGATCTGTTCTGGAACCCGCTGCCCCACCAGGAGGAGCTTGTGCCCGGAAAGTCCTATTACTTGCTCCCCCGAAACAGGGGAAGCGAGAGCGAGAGCGAGAGGGAGAGGGAGAGGGAGATTATGAGGGTGCGTGAGGGGCACGTGAGATCGAACAGCGTACCGGAGGCGGCGGCGATGGCGCCTTACAGAATGTCGTTGGACTACCAGGGGATTCTGAAGCGGTCGCAGACGGAGGTGTTTTCGAGGAGCGGTGAGATTTGGAAGGTGAAATTGGTGATCAGTCCGAAACGGTTGGTGGAGATATTGGAGGAGGAAGGCCACACGCAGGAGCTGATTGAGAGCGTAAGGACTGTGGCCAAATGTGGAACCACCACCACCACCACCACCACCACCACCACCAGTAGCTTCTCTTCCATGCCGTTTTCCGACCACTGGAGTTTGTCCACCAATGCCACTCCCAGTTCTTCCTCCAAAAATGGCGCCTTTTTG

mRNA sequence

ATGGGCAACTGCTTATTCGGCGGTGGCTCCGGCCAGATTCAGGGGAAGATCAAAGTCATAACCGCCAACGGGGGGATCATGGAGTTGGGTTCTCCGATCACCGTCGGGTGCATCGCCGACGAGTTCCCCGGGTACGGGATATTCCGGAGCCACGATCTGTTCTGGAACCCGCTGCCCCACCAGGAGGAGCTTGTGCCCGGAAAGTCCTATTACTTGCTCCCCCGAAACAGGGGAAGCGAGAGCGAGAGCGAGAGGGAGAGGGAGAGGGAGATTATGAGGGTGCGTGAGGGGCACGTGAGATCGAACAGCGTACCGGAGGCGGCGGCGATGGCGCCTTACAGAATGTCGTTGGACTACCAGGGGATTCTGAAGCGGTCGCAGACGGAGGTGTTTTCGAGGAGCGGTGAGATTTGGAAGGTGAAATTGGTGATCAGTCCGAAACGGTTGGTGGAGATATTGGAGGAGGAAGGCCACACGCAGGAGCTGATTGAGAGCGTAAGGACTGTGGCCAAATGTGGAACCACCACCACCACCACCACCACCACCACCACCAGTAGCTTCTCTTCCATGCCGTTTTCCGACCACTGGAGTTTGTCCACCAATGCCACTCCCAGTTCTTCCTCCAAAAATGGCGCCTTTTTG

Coding sequence (CDS)

ATGGGCAACTGCTTATTCGGCGGTGGCTCCGGCCAGATTCAGGGGAAGATCAAAGTCATAACCGCCAACGGGGGGATCATGGAGTTGGGTTCTCCGATCACCGTCGGGTGCATCGCCGACGAGTTCCCCGGGTACGGGATATTCCGGAGCCACGATCTGTTCTGGAACCCGCTGCCCCACCAGGAGGAGCTTGTGCCCGGAAAGTCCTATTACTTGCTCCCCCGAAACAGGGGAAGCGAGAGCGAGAGCGAGAGGGAGAGGGAGAGGGAGATTATGAGGGTGCGTGAGGGGCACGTGAGATCGAACAGCGTACCGGAGGCGGCGGCGATGGCGCCTTACAGAATGTCGTTGGACTACCAGGGGATTCTGAAGCGGTCGCAGACGGAGGTGTTTTCGAGGAGCGGTGAGATTTGGAAGGTGAAATTGGTGATCAGTCCGAAACGGTTGGTGGAGATATTGGAGGAGGAAGGCCACACGCAGGAGCTGATTGAGAGCGTAAGGACTGTGGCCAAATGTGGAACCACCACCACCACCACCACCACCACCACCACCAGTAGCTTCTCTTCCATGCCGTTTTCCGACCACTGGAGTTTGTCCACCAATGCCACTCCCAGTTCTTCCTCCAAAAATGGCGCCTTTTTG

Protein sequence

MGNCLFGGGSGQIQGKIKVITANGGIMELGSPITVGCIADEFPGYGIFRSHDLFWNPLPHQEELVPGKSYYLLPRNRGSESESEREREREIMRVREGHVRSNSVPEAAAMAPYRMSLDYQGILKRSQTEVFSRSGEIWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGTTTTTTTTTTTSSFSSMPFSDHWSLSTNATPSSSSKNGAFL

Homology

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BLAST of MS012756 vs. NCBI nr
Match: XP_038902281.1 (uncharacterized protein LOC120088913 [Benincasa hispida])

HSP 1 Score: 325.9 bits (834), Expect = 2.7e-85
Identity = 175/224 (78.12%), Postives = 190/224 (84.82%), Query Frame = 0


Query: 1   MGNCLFGGGSGQIQGKIKVITANGGIMELGSPITVGCIADEFPGYGIFRSHDLFWNPLPH 60
           MGNCLFGGGSG+IQGKIKVIT+NGGIMELGSPITVGCIADEFPGYGIF+SHDLFWNPLPH
Sbjct: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  QEELVPGKSYYLLPRNRGSESESEREREREIMRVREGHVRSNSVPE---AAAMAPYRMSL 120
            EEL+PGKSYYLLPRNRG     E E E  I+R REGHVRSNSVPE   AAAMAPYRMS 
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGEEEEGEMGIIRAREGHVRSNSVPEAAAAAAMAPYRMSF 120

Query: 121 DYQGILKRSQTEVFSR----SGEIWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCG 180
           DYQG+L+RSQTEVFSR    +G +WKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCG
Sbjct: 121 DYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCG 180

Query: 181 TTTTTTTTTTTSSFSSMPFSDHWSLST---NATPSSSSKNGAFL 215
                +T+T++S  SSM FSD WSLST   NATPS+SSK+G  L
Sbjct: 181 -----STSTSSSFSSSMAFSDQWSLSTTTANATPSASSKSGGLL 219

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BLAST of MS012756 vs. NCBI nr
Match: XP_023552343.1 (uncharacterized protein LOC111810037 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.2 bits (822), Expect = 6.6e-84
Identity = 173/226 (76.55%), Postives = 188/226 (83.19%), Query Frame = 0


Query: 1   MGNCLFGGGSGQIQGKIKVITANGGIMELGSPITVGCIADEFPGYGIFRSHDLFWNPLPH 60
           MGNCLFGGGSG+IQGKIKVIT+NGGIMELGSPITVGCIADEFPGYGIF+SHDLFWNPLPH
Sbjct: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  QEELVPGKSYYLLPRNRGSESESEREREREIMRVREGHVRSNSVPE----AAAMAPYRMS 120
            EEL+PGKSYYLL RNRG       E E  I+R REGHVRSNSVPE    AA MAPYRMS
Sbjct: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGIIRAREGHVRSNSVPEATAAAAGMAPYRMS 120

Query: 121 LDYQGILKRSQTEVFSRSGE-----IWKVKLVISPKRLVEILEEEGHTQELIESVRTVAK 180
            DYQG+L+RSQTEVFSRS E     +WKVKLVISPKRLVEILEEEGHTQELIESVRTVAK
Sbjct: 121 FDYQGVLRRSQTEVFSRSSEKNGGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAK 180

Query: 181 CGTTTTTTTTTTTSSFSSMPFSDHWSLST---NATPSSSSKNGAFL 215
           CG     +T+T++S  SSM FSDHWSLS+   NATPS+SSK+G  L
Sbjct: 181 CG-----STSTSSSFSSSMAFSDHWSLSSTTANATPSASSKSGGLL 221

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BLAST of MS012756 vs. NCBI nr
Match: XP_004146558.1 (uncharacterized protein LOC101218947 [Cucumis sativus])

HSP 1 Score: 317.0 bits (811), Expect = 1.2e-82
Identity = 172/225 (76.44%), Postives = 187/225 (83.11%), Query Frame = 0


Query: 1   MGNCLFGGGSGQIQGKIKVITANGGIMELGSPITVGCIADEFPGYGIFRSHDLFWNPLPH 60
           MGNCLF GG+G+IQGKIKVIT+NGGIMELGSPITVGCIADEFPGYGIF+SHDLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  QEELVPGKSYYLLPRNRGSESESEREREREIMRVREGHVRSNSVPEA----AAMAPYRMS 120
            EEL+PGKSYYLLPRNRG     E   E  I+R REGHVRSNSVPEA    AAMAPYRMS
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120

Query: 121 LDYQGILKRSQTEVFSR----SGEIWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180
            DYQG+L+RSQTEVFSR    +G +WKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRYSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GTTTTTTTTTTTSSFSSMPFSDHWSLST---NATPSSSSKNGAFL 215
           G     +T+T++S  SSM FSD WSLST   NATPS SSK+G  L
Sbjct: 181 G-----STSTSSSFSSSMAFSDQWSLSTATANATPSVSSKSGGLL 220

[Close]

BLAST of MS012756 vs. NCBI nr
Match: XP_022136664.1 (uncharacterized protein LOC111008316 [Momordica charantia])

HSP 1 Score: 317.0 bits (811), Expect = 1.2e-82
Identity = 171/214 (79.91%), Postives = 172/214 (80.37%), Query Frame = 0


Query: 1   MGNCLFGGGSGQIQGKIKVITANGGIMELGSPITVGCIADEFPGYGIFRSHDLFWNPLPH 60
           MGNCLFGGGSGQIQGKIKVITANGGIMELGSPITVGCIADEFPGYGIFRSHDLFWNPLPH
Sbjct: 1   MGNCLFGGGSGQIQGKIKVITANGGIMELGSPITVGCIADEFPGYGIFRSHDLFWNPLPH 60

Query: 61  QEELVPGKSYYLLPRNRGSESESEREREREIMRVREGHVRSNSVPEAAAMAPYRMSLDYQ 120
           QEELVPG                                   +VPEAAAMAPYRMSLDYQ
Sbjct: 61  QEELVPG-----------------------------------NVPEAAAMAPYRMSLDYQ 120

Query: 121 GILKRSQTEVFSRSGEIWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGTTTTTTT 180
           GILKRSQTEVFSRSGEIWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCG       
Sbjct: 121 GILKRSQTEVFSRSGEIWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCG------- 172

Query: 181 TTTTSSFSSMPFSDHWSLSTNATPSSSSKNGAFL 215
           TTTTSSFSSMPFSDHWSLSTNATPSSSSKNGAFL
Sbjct: 181 TTTTSSFSSMPFSDHWSLSTNATPSSSSKNGAFL 172

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BLAST of MS012756 vs. NCBI nr
Match: XP_008452047.1 (PREDICTED: uncharacterized protein LOC103493172 [Cucumis melo] >TYK16646.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 317.0 bits (811), Expect = 1.2e-82
Identity = 171/225 (76.00%), Postives = 187/225 (83.11%), Query Frame = 0


Query: 1   MGNCLFGGGSGQIQGKIKVITANGGIMELGSPITVGCIADEFPGYGIFRSHDLFWNPLPH 60
           MGNCLF GG+G+IQGKIKVIT+NGGIMELGSPITVGCIADEFPGYGIF+SHDLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  QEELVPGKSYYLLPRNRGSESESEREREREIMRVREGHVRSNSVPEA----AAMAPYRMS 120
            EEL+PGKSYYLLPRNRG     E   E  I+R REGHVRSNSVPEA    AAMAPYRMS
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGEDGEEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120

Query: 121 LDYQGILKRSQTEVFSR----SGEIWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180
            DYQG+L+RSQTEVFSR    +G +WKVKLVISP+RLVEILEEEGHTQELIESVRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPRRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GTTTTTTTTTTTSSFSSMPFSDHWSLST---NATPSSSSKNGAFL 215
           G     +T+T++S  SSM FSD WSLST   NATPS SSK+G  L
Sbjct: 181 G-----STSTSSSFSSSMAFSDQWSLSTATANATPSVSSKSGGLL 220

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BLAST of MS012756 vs. ExPASy TrEMBL
Match: A0A5D3D1S5 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004760 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 6.0e-83
Identity = 171/225 (76.00%), Postives = 187/225 (83.11%), Query Frame = 0


Query: 1   MGNCLFGGGSGQIQGKIKVITANGGIMELGSPITVGCIADEFPGYGIFRSHDLFWNPLPH 60
           MGNCLF GG+G+IQGKIKVIT+NGGIMELGSPITVGCIADEFPGYGIF+SHDLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  QEELVPGKSYYLLPRNRGSESESEREREREIMRVREGHVRSNSVPEA----AAMAPYRMS 120
            EEL+PGKSYYLLPRNRG     E   E  I+R REGHVRSNSVPEA    AAMAPYRMS
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGEDGEEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120

Query: 121 LDYQGILKRSQTEVFSR----SGEIWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180
            DYQG+L+RSQTEVFSR    +G +WKVKLVISP+RLVEILEEEGHTQELIESVRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPRRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GTTTTTTTTTTTSSFSSMPFSDHWSLST---NATPSSSSKNGAFL 215
           G     +T+T++S  SSM FSD WSLST   NATPS SSK+G  L
Sbjct: 181 G-----STSTSSSFSSSMAFSDQWSLSTATANATPSVSSKSGGLL 220

[Close]

BLAST of MS012756 vs. ExPASy TrEMBL
Match: A0A0A0KUU6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047890 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 6.0e-83
Identity = 172/225 (76.44%), Postives = 187/225 (83.11%), Query Frame = 0


Query: 1   MGNCLFGGGSGQIQGKIKVITANGGIMELGSPITVGCIADEFPGYGIFRSHDLFWNPLPH 60
           MGNCLF GG+G+IQGKIKVIT+NGGIMELGSPITVGCIADEFPGYGIF+SHDLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  QEELVPGKSYYLLPRNRGSESESEREREREIMRVREGHVRSNSVPEA----AAMAPYRMS 120
            EEL+PGKSYYLLPRNRG     E   E  I+R REGHVRSNSVPEA    AAMAPYRMS
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGEDGVEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120

Query: 121 LDYQGILKRSQTEVFSR----SGEIWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180
            DYQG+L+RSQTEVFSR    +G +WKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRYSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GTTTTTTTTTTTSSFSSMPFSDHWSLST---NATPSSSSKNGAFL 215
           G     +T+T++S  SSM FSD WSLST   NATPS SSK+G  L
Sbjct: 181 G-----STSTSSSFSSSMAFSDQWSLSTATANATPSVSSKSGGLL 220

[Close]

BLAST of MS012756 vs. ExPASy TrEMBL
Match: A0A6J1C4Y8 (uncharacterized protein LOC111008316 OS=Momordica charantia OX=3673 GN=LOC111008316 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 6.0e-83
Identity = 171/214 (79.91%), Postives = 172/214 (80.37%), Query Frame = 0


Query: 1   MGNCLFGGGSGQIQGKIKVITANGGIMELGSPITVGCIADEFPGYGIFRSHDLFWNPLPH 60
           MGNCLFGGGSGQIQGKIKVITANGGIMELGSPITVGCIADEFPGYGIFRSHDLFWNPLPH
Sbjct: 1   MGNCLFGGGSGQIQGKIKVITANGGIMELGSPITVGCIADEFPGYGIFRSHDLFWNPLPH 60

Query: 61  QEELVPGKSYYLLPRNRGSESESEREREREIMRVREGHVRSNSVPEAAAMAPYRMSLDYQ 120
           QEELVPG                                   +VPEAAAMAPYRMSLDYQ
Sbjct: 61  QEELVPG-----------------------------------NVPEAAAMAPYRMSLDYQ 120

Query: 121 GILKRSQTEVFSRSGEIWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCGTTTTTTT 180
           GILKRSQTEVFSRSGEIWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCG       
Sbjct: 121 GILKRSQTEVFSRSGEIWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKCG------- 172

Query: 181 TTTTSSFSSMPFSDHWSLSTNATPSSSSKNGAFL 215
           TTTTSSFSSMPFSDHWSLSTNATPSSSSKNGAFL
Sbjct: 181 TTTTSSFSSMPFSDHWSLSTNATPSSSSKNGAFL 172

[Close]

BLAST of MS012756 vs. ExPASy TrEMBL
Match: A0A1S3BSZ8 (uncharacterized protein LOC103493172 OS=Cucumis melo OX=3656 GN=LOC103493172 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 6.0e-83
Identity = 171/225 (76.00%), Postives = 187/225 (83.11%), Query Frame = 0


Query: 1   MGNCLFGGGSGQIQGKIKVITANGGIMELGSPITVGCIADEFPGYGIFRSHDLFWNPLPH 60
           MGNCLF GG+G+IQGKIKVIT+NGGIMELGSPITVGCIADEFPGYGIF+SHDLFWNPLPH
Sbjct: 1   MGNCLFAGGAGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  QEELVPGKSYYLLPRNRGSESESEREREREIMRVREGHVRSNSVPEA----AAMAPYRMS 120
            EEL+PGKSYYLLPRNRG     E   E  I+R REGHVRSNSVPEA    AAMAPYRMS
Sbjct: 61  NEELLPGKSYYLLPRNRGRNRGGEDGEEMGIIRAREGHVRSNSVPEAAAAMAAMAPYRMS 120

Query: 121 LDYQGILKRSQTEVFSR----SGEIWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180
            DYQG+L+RSQTEVFSR    +G +WKVKLVISP+RLVEILEEEGHTQELIESVRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRCSEKNGGVWKVKLVISPRRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GTTTTTTTTTTTSSFSSMPFSDHWSLST---NATPSSSSKNGAFL 215
           G     +T+T++S  SSM FSD WSLST   NATPS SSK+G  L
Sbjct: 181 G-----STSTSSSFSSSMAFSDQWSLSTATANATPSVSSKSGGLL 220

[Close]

BLAST of MS012756 vs. ExPASy TrEMBL
Match: A0A6J1JCF7 (uncharacterized protein LOC111483212 OS=Cucurbita maxima OX=3661 GN=LOC111483212 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.0e-82
Identity = 170/225 (75.56%), Postives = 187/225 (83.11%), Query Frame = 0


Query: 1   MGNCLFGGGSGQIQGKIKVITANGGIMELGSPITVGCIADEFPGYGIFRSHDLFWNPLPH 60
           MGNCLFGGGSG+IQGKIKVIT+NGGIMELGSPITVGCIADEFPGYGIF+SHDLFWNPLPH
Sbjct: 1   MGNCLFGGGSGEIQGKIKVITSNGGIMELGSPITVGCIADEFPGYGIFKSHDLFWNPLPH 60

Query: 61  QEELVPGKSYYLLPRNRGSESESEREREREIMRVREGHVRSNSVPE----AAAMAPYRMS 120
            EEL+PGKSYYLL RNRG       E E  ++R REGHVRSNSVPE    AA MA YRMS
Sbjct: 61  NEELLPGKSYYLLQRNRGRNRGETEEGEMGMIRAREGHVRSNSVPEATAAAAGMASYRMS 120

Query: 121 LDYQGILKRSQTEVFSRSGE----IWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180
            DYQG+L+RSQTEVFSRS E    +WKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC
Sbjct: 121 FDYQGVLRRSQTEVFSRSSEKNGGVWKVKLVISPKRLVEILEEEGHTQELIESVRTVAKC 180

Query: 181 GTTTTTTTTTTTSSFSSMPFSDHWSLST---NATPSSSSKNGAFL 215
           G     +T+T++S  SSM FSDHWSLS+   NATPS+S+K+G  L
Sbjct: 181 G-----STSTSSSFSSSMAFSDHWSLSSTTANATPSASAKSGGLL 220

[Close]

BLAST of MS012756 vs. TAIR 10
Match: AT1G64700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 140.2 bits (352), Expect = 1.9e-33
Identity = 89/204 (43.63%), Postives = 120/204 (58.82%), Query Frame = 0


Query: 1   MGNCLFGG-GSGQIQGKIKVITANGGIMELGSPITVGCIADEFPGYGIFRSHDLFWNPLP 60
           MGNCLFGG G  +    IKVI ++GG++E  SP+T G ++  F G+ +F + DL W PL 
Sbjct: 1   MGNCLFGGLGDEEEDLLIKVIKSDGGVLEFYSPVTAGFVSHGFSGHALFSAVDLLWKPLA 60

Query: 61  HQEELVPGKSYYLLPRNRGSESESEREREREIMRVREGHVRSNSVPEAAAMAPYRMSLDY 120
           H   LVPG+SYYL P     E ++          V   HVRSNS    +A+ PYRMSLDY
Sbjct: 61  HDHLLVPGQSYYLFPNIVSDELKT---------FVGSCHVRSNS-ESLSAITPYRMSLDY 120

Query: 121 -QGILKRSQTEVFSRS--------------------GEIWKVKLVISPKRLVEILEEEGH 180
              +LKRS T+VFSR+                    G IWKV L+I+ + L++IL E+G 
Sbjct: 121 NHRVLKRSYTDVFSRNSHIRTRQKEKKTRRRRTSSKGAIWKVNLIINTEELLQILSEDGR 180

Query: 181 TQELIESVRTVAKCGTTTTTTTTT 183
           T ELIESVR VAK  T++ T++++
Sbjct: 181 TNELIESVRAVAKGETSSITSSSS 194

[Close]

BLAST of MS012756 vs. TAIR 10
Match: AT3G61920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot, hypocotyl, root, egg cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64700.1); Has 77 Blast hits to 77 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 108.2 bits (269), Expect = 8.2e-24
Identity = 75/182 (41.21%), Postives = 99/182 (54.40%), Query Frame = 0


Query: 1   MGNCLF--GGGSGQIQGK----IKVITANGGIMELGSPITVGCIADEFPGYGIFRSHDLF 60
           MGNC+F   GGS ++  K    IKV+T NGG+MEL  PI    I +EFPG+ I  S  L 
Sbjct: 1   MGNCVFKGNGGSRKLYDKDDSLIKVVTPNGGVMELHPPIFAEFITNEFPGHVIHDSLSLR 60

Query: 61  WN--PLPHQEELVPGKSYYLLPRNRGSESESEREREREIMRVREGHVRSNSVPEAAAMAP 120
            +  PL H EEL PG  YYLLP +  + + ++ +   ++                    P
Sbjct: 61  HSSPPLLHGEELFPGNIYYLLPLSSSAAATAQLDSSDQL------------------STP 120

Query: 121 YRMSLDYQGILKRSQTEVFSRSG-EIWKVKLVISPKRLVEILEEEGHTQELIESVRTVAK 174
           YRMS     I+        S  G  +WKV+LVISP++L EIL E+  T+ L+ESVRTVAK
Sbjct: 121 YRMSFGKTPIM-----AALSGGGCGVWKVRLVISPEQLAEILAEDVETEALVESVRTVAK 159

The following BLAST results are available for this feature:

BLAST of MS012756 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902281.1	2.7e-85	78.13	uncharacterized protein LOC120088913 [Benincasa hispida]	[more]
XP_023552343.1	6.6e-84	76.55	uncharacterized protein LOC111810037 [Cucurbita pepo subsp. pepo]	[more]
XP_004146558.1	1.2e-82	76.44	uncharacterized protein LOC101218947 [Cucumis sativus]	[more]
XP_022136664.1	1.2e-82	79.91	uncharacterized protein LOC111008316 [Momordica charantia]	[more]
XP_008452047.1	1.2e-82	76.00	PREDICTED: uncharacterized protein LOC103493172 [Cucumis melo] >TYK16646.1 DUF42...	[more]

BLAST of MS012756 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS012756 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D1S5	6.0e-83	76.00	DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0KUU6	6.0e-83	76.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047890 PE=4 SV=1	[more]
A0A6J1C4Y8	6.0e-83	79.91	uncharacterized protein LOC111008316 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A1S3BSZ8	6.0e-83	76.00	uncharacterized protein LOC103493172 OS=Cucumis melo OX=3656 GN=LOC103493172 PE=...	[more]
A0A6J1JCF7	1.0e-82	75.56	uncharacterized protein LOC111483212 OS=Cucurbita maxima OX=3661 GN=LOC111483212...	[more]

BLAST of MS012756 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64700.1	1.9e-33	43.63	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT3G61920.1	8.2e-24	41.21	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..143 e-value: 4.1E-16 score: 59.9
None	No IPR available	PANTHER	PTHR33148:SF48	DUF4228 DOMAIN PROTEIN	coord: 1..200
None	No IPR available	PANTHER	PTHR33148	PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED	coord: 1..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012756.1	MS012756.1	mRNA