MS012713 (gene) Bitter gourd (TR) v1

Overview
NameMS012713
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein RTE1-HOMOLOG
Locationscaffold63: 2886467 .. 2888134 (+)
RNA-Seq ExpressionMS012713
SyntenyMS012713
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGACTTTGGAAATGGAATCAAATAACGACCCTGAGAATCAGCTGATGGTTGAAGGTAATATCGCTCAGAATATGAAAATTGATCCCGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCGTGGCTTGTTCCTTTCATTGGTCACATCGGCATTGGCAGAGAGGATGGAGTAATCTTGGACTTCGCAGGCCCCAATTTTGTGTGTGTGGACAATTTCACATTTGGAGCAGTCGCACGGTATCTTCAAATCAACGGAGAGAAGGTACATGCCAGTTTCCATATTTTACCCAAAGATCAATTTTTTTTTTTTTTTTTCATATTTGTGAATGCCTCGACTAATTTCATGGGATAATTGTCAAACCTTACTATATTCAGTTGTTAAAGAAACTCGTAAGTGTTGGGATAATTGAGCCAAAACAGATGACCCGTGTCGAGGAAAAGGATTTTCAAACACTACTACCAATTCTTATAAGGAGTAATTGTCTTATAAGGATTACAATATCATTTTTCTATAAGGATTGAGATATTTGACCTCTTATAAATATAACTCTTTTGTTAAGGTTTCATTTGTGGGCAGTGTGTGAAAAAATGAGTTTGTATCTCGTAAGTTTAGTGAGGATATTTTCAATTGTGTAATCCTAGGTAGTTTGTATCTCGTAAGTTTAGTGAGGATATTTTCAATTGTGTAATCCTAGGTAGTTTGTATCTCGTAAGTTTAGTGAGGATATTTTCAATTGTGTAATCCTAGGTAGTTTGTATCTCGTAAGTTTAGTGAGGATATTTTCAATTGTGTAATCCTAGGTAGACATTGTTAGGGTACTTAAAAACAAGATAGTAATATCTTGAGTGAGATCTCCATTGTAATATTCTCAACTATAGTTGAACCTACTTTTTCGCAGAAGATTGGACATAGTCCCAAGATAGGGGCGAACCAGTATAATCCCTGTGGTGTTAAGCTTTTCTATCTCTATCTCTTATTCTTTCTTTTAGCTTGTGAAAAGGGAAAGTTAAATAGTTCCTGTTTGAAGAACTTACCGGAGGATCGATTGATTTATCTATATTATTTTCCCAACAGTAAGATATTAAATCCTAGATAAGTAGCATCCATCCTCGATGAAATCTTTTACAATCTTAAAATTCTAGACATTTTATTGGTAGGGATCTCATTCCCGTTTGGAAGTTTCTCTTATTTTGTTTCCTGGGTCATTCCTTAACTGATTTGATTGTAATTTGTATGCAGTGTTGCATTTCCACTCATAGAAGTGAAGATGAGATGAGGGAATTTGATCATGGTAGAGAAATATCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGATCCTACAATCTCTTAACTTGCAATTGTCATTCGTTTGTGGCTAATAATCTGAACAGACTTGGGTTTCGCTCAGGTGGATGGAATGTGGTGAACCTTGCCACTCTGATCTTTCTCAAGGGTCGGTGGGTCAGTACAGGAGCTGTAATCCGGACGTTCTTACCATTTGTTGTGGTTTTCAGCATAGGACTCGCACTGGGGGGTACTACGTTCCTAACCTTCTTGGCATTCTTCACTTTCTTCCTTGTTGGTTGGTTCATTCTTGGTACTTATGTCTTCAAAAATTTGGTTCAGTTG

mRNA sequence

ACGACTTTGGAAATGGAATCAAATAACGACCCTGAGAATCAGCTGATGGTTGAAGGTAATATCGCTCAGAATATGAAAATTGATCCCGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCGTGGCTTGTTCCTTTCATTGGTCACATCGGCATTGGCAGAGAGGATGGAGTAATCTTGGACTTCGCAGGCCCCAATTTTGTGTGTGTGGACAATTTCACATTTGGAGCAGTCGCACGGTATCTTCAAATCAACGGAGAGAAGTGTTGCATTTCCACTCATAGAAGTGAAGATGAGATGAGGGAATTTGATCATGGTAGAGAAATATCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGATCCTACAATCTCTTAACTTGCAATTGTCATTCGTTTGTGGCTAATAATCTGAACAGACTTGGGTTTCGCTCAGGTGGATGGAATGTGGTGAACCTTGCCACTCTGATCTTTCTCAAGGGTCGGTGGGTCAGTACAGGAGCTGTAATCCGGACGTTCTTACCATTTGTTGTGGTTTTCAGCATAGGACTCGCACTGGGGGGTACTACGTTCCTAACCTTCTTGGCATTCTTCACTTTCTTCCTTGTTGGTTGGTTCATTCTTGGTACTTATGTCTTCAAAAATTTGGTTCAGTTG

Coding sequence (CDS)

ACGACTTTGGAAATGGAATCAAATAACGACCCTGAGAATCAGCTGATGGTTGAAGGTAATATCGCTCAGAATATGAAAATTGATCCCGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCGTGGCTTGTTCCTTTCATTGGTCACATCGGCATTGGCAGAGAGGATGGAGTAATCTTGGACTTCGCAGGCCCCAATTTTGTGTGTGTGGACAATTTCACATTTGGAGCAGTCGCACGGTATCTTCAAATCAACGGAGAGAAGTGTTGCATTTCCACTCATAGAAGTGAAGATGAGATGAGGGAATTTGATCATGGTAGAGAAATATCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGATCCTACAATCTCTTAACTTGCAATTGTCATTCGTTTGTGGCTAATAATCTGAACAGACTTGGGTTTCGCTCAGGTGGATGGAATGTGGTGAACCTTGCCACTCTGATCTTTCTCAAGGGTCGGTGGGTCAGTACAGGAGCTGTAATCCGGACGTTCTTACCATTTGTTGTGGTTTTCAGCATAGGACTCGCACTGGGGGGTACTACGTTCCTAACCTTCTTGGCATTCTTCACTTTCTTCCTTGTTGGTTGGTTCATTCTTGGTACTTATGTCTTCAAAAATTTGGTTCAGTTG

Protein sequence

TTLEMESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Homology
BLAST of MS012713 vs. NCBI nr
Match: XP_022136620.1 (protein RTE1-HOMOLOG [Momordica charantia])

HSP 1 Score: 463.8 bits (1192), Expect = 8.8e-127
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0

Query: 5   MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 64
           MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV
Sbjct: 1   MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR 124
           ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR 120

Query: 125 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF 184
           STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF 180

Query: 185 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 226

BLAST of MS012713 vs. NCBI nr
Match: XP_038884143.1 (protein RTE1-HOMOLOG [Benincasa hispida] >XP_038884151.1 protein RTE1-HOMOLOG [Benincasa hispida])

HSP 1 Score: 443.0 bits (1138), Expect = 1.6e-120
Identity = 214/226 (94.69%), Postives = 221/226 (97.79%), Query Frame = 0

Query: 5   MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 64
           MES+NDPENQLM+EGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV
Sbjct: 1   MESSNDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR 124
           ILDFAGPNFVCVDNFTFGAVARYLQIN +KCCISTHRSE+E+RE DHGREISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISTHRSEEELREVDHGREISTWDDALRR 120

Query: 125 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF 184
           STQEFQHRSYNLLTCNCHSFVANNLNRLGFR GGWNVVNLA LIFLKGRWVS GAVIRTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRIGGWNVVNLAALIFLKGRWVSKGAVIRTF 180

Query: 185 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           LPFVVVF+IGLA+GGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 LPFVVVFNIGLAVGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 226

BLAST of MS012713 vs. NCBI nr
Match: XP_031740651.1 (protein RTE1-HOMOLOG isoform X1 [Cucumis sativus])

HSP 1 Score: 439.9 bits (1130), Expect = 1.4e-119
Identity = 213/229 (93.01%), Postives = 221/229 (96.51%), Query Frame = 0

Query: 2   TLEMESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGRE 61
           +LEMES+ DPENQLM+EGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGRE
Sbjct: 9   SLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGRE 68

Query: 62  DGVILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDA 121
           DGVILDFAGPNFVCVDNFTFGAVARYLQIN +KCCIS HRSE+E+RE DH REISTWDDA
Sbjct: 69  DGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDDA 128

Query: 122 LRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVI 181
           LRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFR+GGWNVVNLA LIFLKGRWVS GAVI
Sbjct: 129 LRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVI 188

Query: 182 RTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           RTFLPFVVVFSIGLALG TTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 189 RTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 237

BLAST of MS012713 vs. NCBI nr
Match: XP_004146489.1 (protein RTE1-HOMOLOG isoform X2 [Cucumis sativus] >KGN53282.1 hypothetical protein Csa_014607 [Cucumis sativus])

HSP 1 Score: 439.9 bits (1130), Expect = 1.4e-119
Identity = 213/229 (93.01%), Postives = 221/229 (96.51%), Query Frame = 0

Query: 2   TLEMESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGRE 61
           +LEMES+ DPENQLM+EGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGRE
Sbjct: 2   SLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGRE 61

Query: 62  DGVILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDA 121
           DGVILDFAGPNFVCVDNFTFGAVARYLQIN +KCCIS HRSE+E+RE DH REISTWDDA
Sbjct: 62  DGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDDA 121

Query: 122 LRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVI 181
           LRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFR+GGWNVVNLA LIFLKGRWVS GAVI
Sbjct: 122 LRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVI 181

Query: 182 RTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           RTFLPFVVVFSIGLALG TTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 182 RTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

BLAST of MS012713 vs. NCBI nr
Match: XP_008452120.1 (PREDICTED: protein RTE1-HOMOLOG [Cucumis melo] >XP_016901175.1 PREDICTED: protein RTE1-HOMOLOG [Cucumis melo])

HSP 1 Score: 438.0 bits (1125), Expect = 5.2e-119
Identity = 213/229 (93.01%), Postives = 220/229 (96.07%), Query Frame = 0

Query: 2   TLEMESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGRE 61
           +LEMESN DPENQLM+EGNIAQ+MKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGRE
Sbjct: 2   SLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGRE 61

Query: 62  DGVILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDA 121
           DGVILDFAGPNFVCVDNFTFGAVARYLQIN +KCCIS HRSE+E+RE D  REISTWDDA
Sbjct: 62  DGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDDA 121

Query: 122 LRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVI 181
           LRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFR+GGWNVVNLA LIFLKGRWVS GAVI
Sbjct: 122 LRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVI 181

Query: 182 RTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           RTFLPFVVVFSIGLALG TTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 182 RTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

BLAST of MS012713 vs. ExPASy Swiss-Prot
Match: Q9SD42 (Protein RTE1-HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=RTH PE=2 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 8.7e-77
Identity = 143/235 (60.85%), Postives = 176/235 (74.89%), Query Frame = 0

Query: 6   ESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVI 65
           E+  D E+++M+   ++  MKIDP+R RFPCCIVWTPLP ISWLVPFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSED----------EMREFDHGREI 125
           LDFAGPNFVCVDNF FGAV+RY+QIN E   + + RS            E  E  H +E 
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKE- 122

Query: 126 STWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWV 185
            TWDDALR+STQE+QH SYN+LTCNCHSFVANNLNRL  +SGGWNVVNLATL+  KGRWV
Sbjct: 123 PTWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWV 182

Query: 186 STGAVIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           +  A++++ LP ++V++IG+ LGG TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 NKTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

BLAST of MS012713 vs. ExPASy Swiss-Prot
Match: F4ITL6 (Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana OX=3702 GN=RTE1 PE=1 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.7e-59
Identity = 112/208 (53.85%), Postives = 150/208 (72.12%), Query Frame = 0

Query: 26  KIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 85
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 86  RYLQINGEKCCI----STHRSEDEMREFDHGREISTWDDALRRSTQEFQHRSYNLLTCNC 145
           RYLQ++  KCC+      H  +   +  D G    TWD+AL  ST+ F+H++YN+ TCNC
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFG-TARTWDNALSSSTRSFEHKTYNIFTCNC 162

Query: 146 HSFVANNLNRLGF-RSGGWNVVNLATLIFLKGRWVSTGAVIRTFLPFVVVFSIGLALGGT 205
           HSFVAN LNRL +  S  WN+VN+A L+ +KG+W++  +V+R+FLP  VV S+G+ L G 
Sbjct: 163 HSFVANCLNRLCYGGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLVGW 222

Query: 206 TFLTFLAFFTFFLVGWFILGTYVFKNLV 229
            FL  L+ F+  L  WFI+ TY FKN++
Sbjct: 223 PFLIGLSSFSLLLFAWFIIATYCFKNII 249

BLAST of MS012713 vs. ExPASy Swiss-Prot
Match: Q9H0R3 (Transmembrane protein 222 OS=Homo sapiens OX=9606 GN=TMEM222 PE=1 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 2.5e-31
Identity = 71/172 (41.28%), Postives = 103/172 (59.88%), Query Frame = 0

Query: 27  IDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 86
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 87  YLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRRSTQEFQHRSYNLLTCNCHSFVA 146
           Y ++             D  + +  G   + WD A+  +++E++HR +NL   NCHS VA
Sbjct: 105 YWKL-------------DPAQVYASGP--NAWDTAVHDASEEYKHRMHNLCCDNCHSHVA 164

Query: 147 NNLNRLGF-RSGGWNVVNLATLIFLKGRWVSTGAVIRTFLPFVVVFSIGLAL 198
             LN + +  S  WN+V L     L G++VS GA ++T+LPF+++  I L +
Sbjct: 165 LALNLMRYNNSTNWNMVTLCFFCLLYGKYVSVGAFVKTWLPFILLLGIILTV 201

BLAST of MS012713 vs. ExPASy Swiss-Prot
Match: Q8BVA2 (Transmembrane protein 222 OS=Mus musculus OX=10090 GN=Tmem222 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.6e-30
Identity = 70/172 (40.70%), Postives = 103/172 (59.88%), Query Frame = 0

Query: 27  IDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 86
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSAGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 87  YLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRRSTQEFQHRSYNLLTCNCHSFVA 146
           + ++             D  + +  G   + WD A+  +++E++HR +NL   NCHS VA
Sbjct: 105 FWKL-------------DPGQVYASGP--NAWDTAVHDASEEYKHRMHNLCCDNCHSHVA 164

Query: 147 NNLNRLGF-RSGGWNVVNLATLIFLKGRWVSTGAVIRTFLPFVVVFSIGLAL 198
             LN + +  S  WN+V L     + G++VS GA ++T+LPFV++  I L +
Sbjct: 165 LALNLMRYNNSTNWNMVTLCCFCLIYGKYVSVGAFVKTWLPFVLLLGIILTV 201

BLAST of MS012713 vs. ExPASy TrEMBL
Match: A0A6J1C4G0 (protein RTE1-HOMOLOG OS=Momordica charantia OX=3673 GN=LOC111008280 PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 4.3e-127
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0

Query: 5   MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 64
           MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV
Sbjct: 1   MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR 124
           ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR 120

Query: 125 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF 184
           STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF 180

Query: 185 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 226

BLAST of MS012713 vs. ExPASy TrEMBL
Match: A0A0A0KXZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G044470 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 6.6e-120
Identity = 213/229 (93.01%), Postives = 221/229 (96.51%), Query Frame = 0

Query: 2   TLEMESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGRE 61
           +LEMES+ DPENQLM+EGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGRE
Sbjct: 2   SLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGRE 61

Query: 62  DGVILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDA 121
           DGVILDFAGPNFVCVDNFTFGAVARYLQIN +KCCIS HRSE+E+RE DH REISTWDDA
Sbjct: 62  DGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDDA 121

Query: 122 LRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVI 181
           LRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFR+GGWNVVNLA LIFLKGRWVS GAVI
Sbjct: 122 LRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVI 181

Query: 182 RTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           RTFLPFVVVFSIGLALG TTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 182 RTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

BLAST of MS012713 vs. ExPASy TrEMBL
Match: A0A1S4DZL7 (protein RTE1-HOMOLOG OS=Cucumis melo OX=3656 GN=LOC103493222 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 2.5e-119
Identity = 213/229 (93.01%), Postives = 220/229 (96.07%), Query Frame = 0

Query: 2   TLEMESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGRE 61
           +LEMESN DPENQLM+EGNIAQ+MKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGRE
Sbjct: 2   SLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGRE 61

Query: 62  DGVILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDA 121
           DGVILDFAGPNFVCVDNFTFGAVARYLQIN +KCCIS HRSE+E+RE D  REISTWDDA
Sbjct: 62  DGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDDA 121

Query: 122 LRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVI 181
           LRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFR+GGWNVVNLA LIFLKGRWVS GAVI
Sbjct: 122 LRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVI 181

Query: 182 RTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           RTFLPFVVVFSIGLALG TTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 182 RTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

BLAST of MS012713 vs. ExPASy TrEMBL
Match: A0A6J1FW19 (protein RTE1-HOMOLOG-like OS=Cucurbita moschata OX=3662 GN=LOC111447395 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.1e-114
Identity = 202/226 (89.38%), Postives = 215/226 (95.13%), Query Frame = 0

Query: 5   MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 64
           M S+NDPENQ+M+EGN+ Q MKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGREDGV
Sbjct: 1   MGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR 124
           ILDFAGPNFVCVDNFTFGAVARYLQIN +KCCISTHRSEDE RE D+GREISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRR 120

Query: 125 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF 184
           STQEFQHR+YNLLTCNCHSFVANNLNRLGF +GGWNVVNLA L+FLKGRWVS GAVIRTF
Sbjct: 121 STQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTF 180

Query: 185 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           LPF VVFSIG+A+ GTTFLTFLAFFTFFLVGWF+LGTYVFKNLVQL
Sbjct: 181 LPFGVVFSIGVAMVGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 226

BLAST of MS012713 vs. ExPASy TrEMBL
Match: A0A6J1J2Z1 (protein RTE1-HOMOLOG-like OS=Cucurbita maxima OX=3661 GN=LOC111481385 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 5.4e-114
Identity = 201/226 (88.94%), Postives = 213/226 (94.25%), Query Frame = 0

Query: 5   MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 64
           M S+NDPENQ+M+EGN+ Q MKIDPE ARFPCCIVWTPLPVISWL+PFIGHIGIGREDGV
Sbjct: 1   MGSSNDPENQMMIEGNVVQEMKIDPESARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 60

Query: 65  ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR 124
           ILDFA PNFVCVDNFTFGAVARYLQIN +KCCISTHRSEDE RE D+GREISTWDDALRR
Sbjct: 61  ILDFADPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRR 120

Query: 125 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF 184
           STQEFQHR YNLLTCNCHSFVANNLNRLGF +GGWNVVNLA L+FLKGRWVS GAVIRTF
Sbjct: 121 STQEFQHRPYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTF 180

Query: 185 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           LPF VVFSIG+A+GGTTFLTFLAFFTFFLVGWF+LGTYVFKNLVQL
Sbjct: 181 LPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 226

BLAST of MS012713 vs. TAIR 10
Match: AT3G51040.1 (RTE1-homolog )

HSP 1 Score: 288.1 bits (736), Expect = 6.2e-78
Identity = 143/235 (60.85%), Postives = 176/235 (74.89%), Query Frame = 0

Query: 6   ESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVI 65
           E+  D E+++M+   ++  MKIDP+R RFPCCIVWTPLP ISWLVPFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSED----------EMREFDHGREI 125
           LDFAGPNFVCVDNF FGAV+RY+QIN E   + + RS            E  E  H +E 
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKE- 122

Query: 126 STWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWV 185
            TWDDALR+STQE+QH SYN+LTCNCHSFVANNLNRL  +SGGWNVVNLATL+  KGRWV
Sbjct: 123 PTWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWV 182

Query: 186 STGAVIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           +  A++++ LP ++V++IG+ LGG TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 NKTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

BLAST of MS012713 vs. TAIR 10
Match: AT3G51040.2 (RTE1-homolog )

HSP 1 Score: 288.1 bits (736), Expect = 6.2e-78
Identity = 143/235 (60.85%), Postives = 176/235 (74.89%), Query Frame = 0

Query: 6   ESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVI 65
           E+  D E+++M+   ++  MKIDP+R RFPCCIVWTPLP ISWLVPFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSED----------EMREFDHGREI 125
           LDFAGPNFVCVDNF FGAV+RY+QIN E   + + RS            E  E  H +E 
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKE- 122

Query: 126 STWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWV 185
            TWDDALR+STQE+QH SYN+LTCNCHSFVANNLNRL  +SGGWNVVNLATL+  KGRWV
Sbjct: 123 PTWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWV 182

Query: 186 STGAVIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           +  A++++ LP ++V++IG+ LGG TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 NKTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

BLAST of MS012713 vs. TAIR 10
Match: AT3G51040.3 (RTE1-homolog )

HSP 1 Score: 288.1 bits (736), Expect = 6.2e-78
Identity = 143/235 (60.85%), Postives = 176/235 (74.89%), Query Frame = 0

Query: 6   ESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVI 65
           E+  D E+++M+   ++  MKIDP+R RFPCCIVWTPLP ISWLVPFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 66  LDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSED----------EMREFDHGREI 125
           LDFAGPNFVCVDNF FGAV+RY+QIN E   + + RS            E  E  H +E 
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKE- 122

Query: 126 STWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWV 185
            TWDDALR+STQE+QH SYN+LTCNCHSFVANNLNRL  +SGGWNVVNLATL+  KGRWV
Sbjct: 123 PTWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWV 182

Query: 186 STGAVIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 231
           +  A++++ LP ++V++IG+ LGG TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 NKTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

BLAST of MS012713 vs. TAIR 10
Match: AT2G26070.1 (Protein of unknown function (DUF778) )

HSP 1 Score: 229.6 bits (584), Expect = 2.6e-60
Identity = 112/208 (53.85%), Postives = 150/208 (72.12%), Query Frame = 0

Query: 26  KIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 85
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 86  RYLQINGEKCCI----STHRSEDEMREFDHGREISTWDDALRRSTQEFQHRSYNLLTCNC 145
           RYLQ++  KCC+      H  +   +  D G    TWD+AL  ST+ F+H++YN+ TCNC
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFG-TARTWDNALSSSTRSFEHKTYNIFTCNC 162

Query: 146 HSFVANNLNRLGF-RSGGWNVVNLATLIFLKGRWVSTGAVIRTFLPFVVVFSIGLALGGT 205
           HSFVAN LNRL +  S  WN+VN+A L+ +KG+W++  +V+R+FLP  VV S+G+ L G 
Sbjct: 163 HSFVANCLNRLCYGGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLVGW 222

Query: 206 TFLTFLAFFTFFLVGWFILGTYVFKNLV 229
            FL  L+ F+  L  WFI+ TY FKN++
Sbjct: 223 PFLIGLSSFSLLLFAWFIIATYCFKNII 249

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022136620.18.8e-127100.00protein RTE1-HOMOLOG [Momordica charantia][more]
XP_038884143.11.6e-12094.69protein RTE1-HOMOLOG [Benincasa hispida] >XP_038884151.1 protein RTE1-HOMOLOG [B... [more]
XP_031740651.11.4e-11993.01protein RTE1-HOMOLOG isoform X1 [Cucumis sativus][more]
XP_004146489.11.4e-11993.01protein RTE1-HOMOLOG isoform X2 [Cucumis sativus] >KGN53282.1 hypothetical prote... [more]
XP_008452120.15.2e-11993.01PREDICTED: protein RTE1-HOMOLOG [Cucumis melo] >XP_016901175.1 PREDICTED: protei... [more]
Match NameE-valueIdentityDescription
Q9SD428.7e-7760.85Protein RTE1-HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=RTH PE=2 SV=1[more]
F4ITL63.7e-5953.85Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana OX=3702 GN=RT... [more]
Q9H0R32.5e-3141.28Transmembrane protein 222 OS=Homo sapiens OX=9606 GN=TMEM222 PE=1 SV=2[more]
Q8BVA21.6e-3040.70Transmembrane protein 222 OS=Mus musculus OX=10090 GN=Tmem222 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1C4G04.3e-127100.00protein RTE1-HOMOLOG OS=Momordica charantia OX=3673 GN=LOC111008280 PE=4 SV=1[more]
A0A0A0KXZ76.6e-12093.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G044470 PE=4 SV=1[more]
A0A1S4DZL72.5e-11993.01protein RTE1-HOMOLOG OS=Cucumis melo OX=3656 GN=LOC103493222 PE=4 SV=1[more]
A0A6J1FW191.1e-11489.38protein RTE1-HOMOLOG-like OS=Cucurbita moschata OX=3662 GN=LOC111447395 PE=4 SV=... [more]
A0A6J1J2Z15.4e-11488.94protein RTE1-HOMOLOG-like OS=Cucurbita maxima OX=3661 GN=LOC111481385 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G51040.16.2e-7860.85RTE1-homolog [more]
AT3G51040.26.2e-7860.85RTE1-homolog [more]
AT3G51040.36.2e-7860.85RTE1-homolog [more]
AT2G26070.12.6e-6053.85Protein of unknown function (DUF778) [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008496TMEM222/RTE1PFAMPF05608DUF778coord: 100..174
e-value: 1.3E-19
score: 71.3
coord: 43..92
e-value: 3.5E-20
score: 73.2
IPR008496TMEM222/RTE1PANTHERPTHR20921UNCHARACTERIZEDcoord: 3..230
NoneNo IPR availablePANTHERPTHR20921:SF5SUBFAMILY NOT NAMEDcoord: 3..230

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS012713.1MS012713.1mRNA