MS012697 (gene) Bitter gourd (TR) v1

Overview


Name	MS012697
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DNA-directed RNA polymerase III subunit RPC5
Location	scaffold63: 2711149 .. 2722040 (-)
RNA-Seq Expression	MS012697
Synteny	MS012697

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCTGGACGACCTAGACGAACCGAGCCAGGTACCATCACGAACCTCCAGATTCGCACCGAAGACCTCTAAATTCAAGCCGAAGCCGAAATCGGAAGTAGTTCCGAAGCCGGAGCCCCAACAGCCGCCGACGAAACCGGAACCTGAACCTCCCGCTTCGAAGCCGGAACCAGAACTTGTGGAGCCGGATGCTGCAACTGGGGAGAAAAAGGAAGAAGGAGAAGAAGTTGAAGTGAAACCAAAAGTTGAATCCTCGCTTCCTAATGGCGTTGATAAAATGGACGTTGAAACTAAGTCTGAAGCTGAAGAGGAGACAATGGTGGATGATCCGATGGAAGAAGATGTTTCTGAAGATATGGTGGTTCGTGAAATCGACGTTCTGTTCACTCCTTCAGCTGACATCAATTCGAAGGTTAGTATTCCTTGTATTTGTACTGTAATCTCTGTACCTTTCGTTTCGTTCTTTGCATTTTGTCCGTTTTGAAATTTGAACGTGATTTTCATCTGTTTTCAGTTGTATGTATTGCAATATCCGCTGAGACCATGCTGGAGGCCCTATGAATTTGAGGGGCGATGTGAGGAGGTGAGTATTTTCTTAATTTCATTTTTTTCTGGAAGAATGTGAACTATACTCTTCTAGCTTTAACAGGTGAGAGTTAAACCTAGCAGTGGAGAAGTGGAAGTTGATCTGAATGTTGATATTGAATCCAATAACTATGACAGTAAAGCTGAGGGCAGTTTGCAAATGAAGAAGCAGGTATCTTCTCTTATGGTTCTATTGGTCGAGAGTCTTTAAATTGCCGTTTAAGTTTACGTGGTATGGGCGGAACAGGAAAACAATCAGAATTTTGGTATTTGGGAATTTATTAGTTTACTGGTAGTCCATTTGTATGATTAACCTTGCAGATTGCATTGGATTTAACTTGAAAAACGCGTTGCATTCGTTACTATTTTTCCAAAGATAAAAAAGGTGCTAGTTTTATTAGAGACTGAATTCGTTAAAGCTTCTAGTTGTGTGCACCTAAATATCCTTCTTTTTTCCCGTCGCATTAGTCTTGAATTTTTTCTCGCTTGGTGAACTATATTTCATCTGGTAAAGAGTAATTTATTTCATGTACTTCAAGTGAGGATTGAGTTATTGGTGCTTTATTTTAGTGGATACCAACAACAGCTTGTTTTTGGTTCAGACTTTGACATCTTCGTGGCAACCACCTCTAGCAACTACCTATGCTGTTGGGCTGCTTATGGGTAATAAGGTTGCTTATATATTTCATATCTTCTGAACTTCACTCTTCACTATCTTTTTGACATTGAATCTACTGTAGTTGATTGACTCTTTGTTTGTTTGTTGTTCTAGTACTTGGTCTATTCTCATTGACACAGTTCAATTATATCTTTATCTATTCCATTATCCATGACATCAGGAGAAATGTATCATTTGTTTTGTTTGTTTATGTTTTTGAGTTTACACTCTTACAGAGAAACACAACTTTTCATTGATATTTGAAAAGTTTCAAAGCGTTAACTCCATCTTGGTTGCAAACTAAAGCCCCCAAAACAAGAAAATTAATTACAAACACCATACTCCCCACGTTGAAGCCAAACCCTACAAAAATGCTTTCCTATAAGAATTAATATCAAAAGAGGAACAATTACAAAACACATCAAACATTGCATAACACACCAAGAAACCACATTTAGCTTAACAGTATCGCATCTATCCACCTAAGGACTAAGGAGCTTGTTTGCCTTCAAATAAATGTTGATTCCTTTCCAATTAAATACCCCTACAAAATTGACTTGGCTATATATATCCATGGAATTTTTGCGTTCTTCTTAAAGCTCTGACTGCAACGAAGTTGGAAAATATTTTTTTCAACCTTCCAATCGAACACCCACAAACATCCAAAGACTTGCAGCAACCATTCCAAAATATTCCTACAATAGGAGCAATGAGAAAACAAATTCTGAAGATCCTCCCCCGCATTTAGGCACAACATGCAGCAGCTCAGATCTAAAGACCAAAATGGACATCTTATAATTTTATCTACCATATTTAGAATTTCCAAGAAGACCAACTAAGATAGATATTTACCTTTCTTGGACTCTTGATTTTCATGAAGCGTAGGAAGGGAAGGTGCCTGCTACTAACTAGCTGTCTGACAAGTGATTTTATTGAGAATATTCCCGACTTACCCAATTTCTAGCTTCTCTTTAGCTTTAATGCTGCACTTGACATGTTAGGTAATTTACACTTCAATTGTAGATGGAGATTGCAAGGTGCCTAAAAGAAATGCTTTCATTTGGAGGAATTAATTTAAGCTCATTTAGATTCAACCACTGTTTAAATAACTATTAGGGACCTCAGGAAGATATTAACAGAATCTAATTTGTGCATTTGGAACGTAGAATGGGGTTAGTTAATTTTGTAATTTGAAGTCTTCTGTAGTTTATCATTGATACTTCAAGGTACCTAAGCTCTCAGATAAGCCCTTGTCTGACATTAAACTTTGTATCACCTGCCAGATTTGTGACAAATTTTGGAGAGAATATTTAGGATGACACCGTGGTAACCTAATTACTTCGTGGCTTCTTCCATTGTTGTTTATACCTTTGATGAACATCTCTTCTTCTCTTTGAGTCAAATGTTGTGTTCAAGAATGAAAAGTTATGTTTGCATATGACTTGGCTCTATTTATGTAAAAGTATACTTTTGGTAGAGTACACAAAATAAATTTGTATTTTGTATGGTTGAATTAAGAATATTGAATCTGTTAGGCCTCATATAGTGATGACCTACAGTAGGAAGGGGAAGGGTAAAAAGGGACATTAGGACCGTAACGGTCAGGAGAGAGAAGAATAATAATACCTAGCCATGTGGTTAAATAGGGAGGAGGATTGGTTAGGAGGGGTGTCTAGAATTCAGTGCATTGTGCATAGAAGGAGGATAGGAGAGATTCCCCACCCTCTCGAATAGGTGGGTTAGTGCTGTACTAGCCTACGGGCTTTCTTATTTTCAATCGCACAGTAGAATTCCAAAGTGAGGGATACCTCACAGCATCCTACACGATCTTATACTATTGCACCTGTAATTGATTGCATGGGAAACCTTGATTTTGTACTTTAGTTGGTTTTTTCTTCTTACTAGTTAGAATGAGAACGTAAGAAGATTTAAGTTCATATGTATTCCTCTGATTTATATCTTAAATGCCAAAATATTTGCCTGATTCTGGTATAAAGACCTGTTTGGTTCAATCTTTTTTAGAAAAATGAATAACTATTGCTAGTGTGTCTATGGGTTATATTGCAGTTACACCTGAATCCCATACATGCAGTTGTGCAACTTCGACCATCAATTGAACACCTTAATTCTGGTGGCCCGAAAAGGAAAAATATTGTTAGAGGTGATCCAGATGTTAAACCAGAAGAGTCTATAGATGTTAACTCTGCAGTTGCATCAAGGAAGCAGGTTATTTTCATTATATCTTTCTATTATATAATAAAACACTCCTGAAACATACTGAAAACCATTTTCGGAAGTCTGCTGGTTCTGATTATTTGGAGACTGTCAAGTGATCAAAATTATCATTAATTCACAATATATCTTTATTTGGCTTTAGACATTTTTTTTTGGGATAGGAAACAGAAACCAAAGTGCTATTAGGTCAGTTATGGTTATGGTTATGGTTACAGAGGATATTGAAGCGTGTTAAAATTTGCTAAAACCGATGCTCAACATAGCTGAGAGAAAATAACAAGAAATGCATTCAGTCAAGGTCTATGCTAGCTCAATATTTGAAAGGAAGGTCCAAAGTATGGTTGATTTTTATTTTTTCCGGGGGGGGGGTTGGAGGGATGACGAAGGAGAGTGTAGGGTAGGAAGTAGGTAGAATTTGGGAGAATATTTGGGAGAGAGATAACCATATTGGAAGACTATTTATTTGTATAAGCAACTTTACATCTTTCCTTTCAATATTTTGTTTCTTATTTTTCTCTGCTACCTGGCGGATCCTATCATTATGTCTTGTTGGTTTACGTTTACATCTGGGATTGCTATTTTGTTCTGAGTTTTTGTACTTTTGTACCGTTTTATTGGAACAGAAAAAGCAAACTGGTTCTTCAACAGAGCTTAAAACTGGAGATGATGAGGTAATGTCATTGACCTTGCATAATGAACCGATACTACCAGACACCATGTGTTAGGTTAATAATTTTTATTTTTTAATTTTTTAATTGAACATACAGCTTCTTTTGTTTCCAAGGGGTCTTTCTTTGAAGTACTCAATTAGTAGAGATCGCTTTTGAGAAAAGTGTTTTCAAGTGAAAAAAATTCTTCTATTAGCACTTCTATTAGCATTTTTGGAAGAATGACAGATTAAGTTCTTCCACAAGAATCACTTTGAATGCTTTTAGGATTTTCAAAATCGCTTTTGACTATGTAACCAAATGCCATTAACATTTCAAAAAGTGCTTATTTATTGATTTTCCTTTTAATTTTTAATTATTGTTATTTATTCATTTATCTAATGATACGAAAAAAGAGTACCAAACATGGGTTTAGCTTGCCTAAGCCTATTCCCACCCAACAAAACCTCCAAACAAATGGCCCCTTGGGGATTTCTTATAGGAAAAAGGGGGGTTACATCTTGGTCAGATGGGAGATTGTTTTGAAACTCATCTCAGTGGGAGGGCCAAGTATTGATAACTTGTTGCTCCATAATGAGGCCTTGCTCACTAAATGGATTTGGCGCTTTTCCATGGAAGATATTGCTCTATGGTGTAGGATCATTGTGAACAAGTATTTGTCTATCCCTTCGGGGTGAGTTTCCAACCGTAGGGTCAAAGGTGTAGAGATCTATTGCCCTGGGGTATCTGAATATCTCTAGATTTGTCAGGTTCATTGTCGAGACTCGAGGATGGGGCATCAACTGGGAGGATGGTTGGATGGGGATAGTCGCCTTTGCCATCTCTTTCCTAGTCTATACCATTTGTACTCGCTTATGTTTGTGTCCATTGCGACTATTCTTGTTTTCACTGCGGACTCTTTATTGTTCAATTTTGGTTTCATCAGTAAGTTGTCAGATTGTGAGTCTTCAGACGTTTCTTTGCTTCTGTACTTGCTAGCCAATTTCTCTCCTCGGATCAGAGTTAGGGATATTCGTTTTTGTTCTCCTAGCCCATCAAGGATTTGTCTTGCAACTCCTACTTTTCTGTTATTTGTGGTTCCACCCTTCCCACAAGTTCTTTGTTCTCTTCACTGGAGAAGGTTCGAATTTCCAAGAAGGTCAACTGTTTGCCTGGGAAATCACCCATGGGATGTTTAACACCATAGAGTCTCATTCGAAGATTGTTTTCTATTGTGCTAGGGACCACTGGTCTTAGTGGTGCAAAGTGTGTAAGAAGGCCACAGAAAGTCTGGATCATATTATTTGAGATTGTCAGTTTACTTCAGCTATTTGAGATAGATTCTTGGGGACTTTCAGTATACAGTTGACTTGTAATCTCTCGTGCAGGCTTATGATGGAGGAGGTGCTTTTCCAACTCCTTTTCATGATAAATGGGTGTTTCTGTGGCAAGCAGCTTTTCTCGCAAGTTTGTGAAATGTTTGGCTAAAGCAAAATAGGAGAGTCTTTAGTGATAAGGAAAGTTCTTGGGAGGAGGTTGGAGACTTGGCTAAGTTCAATGCCTCCCTTTAAGCTCCTATCACCAAGGACTTTAGTGTTTATGCTTTATCTCTCATTTTGTTGAATGGAAGCCCCTTTTTGTAATTTTTTTTTGCTTTTCTTTCTTTTGTTTTGGGTGCTTTGATTCCTGCTGGCTTGAGCTTTTCTTTTTTTGTATTGCCCTTATGTATTCTTTCTTTTGTTCTAAGTTGTCTTTGAAAAAATTAGATCTATTTTTTTTCGGCATCCAGATTCTTATATGGCTTTCTAGGACTATTGGGGGATTGTAATAAGGACTTGTTGATAATGTTTATGGTGTTCCATAAGAAATTGATGCTAGATGCCTTGCCTCTACGAATAATACTTACATTTGCCTACCCAGTGAAAAAATTTGAACCCATAAGCTAGTTACAAGTGTGTATAAGATTATCTCTAAGGTTTTCAATTGATAATTATAGGAATGTTGTTTCTCTCAGTGTCTGTGTCTTGTCTGCAAATGGCTTTTCTGAAGGGTAGAGAAATCCTTGATGGAGTTCTAATTCCTGATGAGACTATTAAGGATTTTACATCAGAGGAGTAGTATAACTGAAACCTCAGCATGGCTATTGAGAGAAAGAGAGACGAGAGAGAGAAATTTAGAGATTGAGAGATGAGAGAGAGAGAGAGAGAGTGGGAGATTTTTGGGTAGCCCTTGTATAGTTGTATTTTGTTCAAGAAAGTAGAGTTTCTCGCTAGAAAGAAAGTGCTATACTAATGGAACCATTCTTTTACAGTTTTTTAATGTTGTTTGGTTCACTCTTTCTCTAGTGTTGGATTCCACTCAAGTACTATGGCCTAGAGAGTGATCTGTCAACCAGATATCAGCGAAGCATGGTGGCACAAAAAAGTTCCCCTATACAATTTTCAATGAGCCCGTATGTATTTTTTGCTTCTTGATGCATATAATCTTCAATGAAAGTGAATTTCATCTATTTGTTAATAATATTTATTTTGAGTATTTGATTTGGTTGCCCTTTTTGTAGGCATGACTATATGAACTCCTTGTGTCCTGGTGCGTGCACAAGCAGCATTAAGCCCAGGGGTCCATCTAAAAGGTGTATGAATTTACATATTAGGCTGTTCAATTTTGTGTTACTGAGCATTTAAGTGGTCAGGAAACTGCTTGCTTGTAGAAGTAAACATGGAAAATTAAAGTATTTACTAATGTTTTAATCCTACTTGTGGCCATATCAGGTATTTGCTTTCATTGTCTTTGGACGAACGGATTAAGAAATTGCTCAGCGAGGTTTGTAAGATGATTACTTATCAAAGTTTAATTCCTGATTGCCCTATCAAGATATTGGTGTCTTGTCTACTCTAACGTCTAACCTTTATGCATTATAAGTTGGCTACATATTCTGTCTCTTTGTGCGTTCATCAAACATTTTCAATTATCATGAGATCTTGCTTTAAAATTTTACTCTCTCAACTTAATCAAGGAATTTTTGTTGCATTTATGCTTATTTGATTTTTTTTGTTGGTGTACTACATTAGCCATTGGTAGATAAAAATTTCTTTTGAAATTGTTAGTGTCAGTCATTATTTTAACAATAGAAAATATTACTTTTATTGAGTGGCATGCACATGGTTTATAAACACAATCACAAAATAGGATAGCGGTAAGCAAAAAATATTTGCCTTAGATGAGCTTGACCAATCAATCAATTTCCAATTGATGTCTAAAGCGTAAGGTTAAAATTTACACTCAGACATCTCAAAAGCATCACATGCGTAATATATAGAGCAATACCATAATTTGATTGGAATTGTGATATTAAGACCTAATTATTGTACCTTTATGGGAATATTTTTTGTGATGTCATTGGGGTGTTTGAATTTGTATTCAGAAAAAGATTTTCATTTTTGTTTGATGGGGACTAGTTCTGAAAATATTTTTAATTTTTCATAAGAAAGATTGCTTCTTATTGACAGAACTTTAACCTCTTTTTTCCCCTTGATTGAAATTTATTTTGGAATTGAAAGGGGGAAGTGGGAGGAGATGCCGATAGCTTCATAAGAAAGTGTATTATCTTTTTACCTTTTAGCTTTTATATACTTGCTGAGTCATTGTTGATGACCTATCCTGTGTTTGTATTTCGAATAATTTCTTTCTCCTTTTCAATAGGGACCTCCAGTTCAAAGATTCAGTGCACTTAAGCATTATGCCCCTGATTATGAAGCGGAAGAATTTATCGAAGCTCTTCAGCAGTATGCTCAGTTAGTGCAGGGTCTCTGGGTTGCAAAAAGTTCATTTCTACTTCCCCAAGATGGTGGCGGACGTTGTGCTAGAGATTTTGTTCTTTGTCTGTTTAGCAAGAATCCTCTTATCAGCTCATCACAGATAAATGTTCCAAAGTCTCTTCGGGACAAAGCGAAACATTTTCTGAATTTGTTCGCTGTCGAAAGACCTGCCTTTAAGGACTGGAAATTTAGGGAGAAAACAGATCGTTCATTTTTAAATAACTACCTGGATATTGTTCAGAAGCAAGAAAAGATATGGAGATCTGTAGAAGAAGGGATCACTAATTCCTTCCGGGGATCTGTCAAAAGTGGGTCCCATGCAAATGCTGCTACAGGAAAGCCTGACATAGTTCCTAAAACTGAAAAACAAGTCAGTTTTGACAAAGCTACGACAAAAAGTAGTAGTGCACCTCTCAACCGAAAAAGTACCATGTCAGATGAAACTCGAGAAGCTTTACCAAAAGCCCTTCAAAAGCTTTTTCAAAATCACAAGGTTTGCAGGTAGGGGCTGGACCTCTTTCTTGCTTGTGCTTATCCTTGTGAGATTTTTTTCTTGGTTGGAAAGGAATGCTAGTTTCAATAGTACAGAGAGGAACTTTGATGAGATTTAGGATAGCATTGCTTTTAACCTCTCTTTTAAGTCTTCACGTTTTGTAATACTCCAACTCCAACAGTTATCAATCATGGGTCACTGTCATAATCTATTCTTCCCTTGTGCAAGATAAAGCTTCTTGTAGTAAGCTAATGTCGCTTGCCTTGTTATTGCAGCTTTCAGTTGATATGTCAAGGTTTACGTGATTTGGCTGTGTCCCAGTCTACTCTTCCAAAAGCTGATGCCAGAATGGCGGTGGCTGCTGCATATGGTGTTGATGCTCCTCCGGATGAATTAAAAAAAATCATAGGCCAAGTTGCAACTGAGATTCATGGTCTCTATGTCATGACGTCATCTCCAGAGCATCCAGAATATGATCCATTAAGGTTGCTGGTGAATTTTATTCATGGTCAAAGTGTCTTGTACGAAACATCTTCGTTTGTGTTATTTTCCCATCCTTGGAGCTCTAAGAAAGGGTGTCGGAAGATTAAAAAAAAGTACTAGTAATTTGAGCTAGGGGCACATTGGTTGGTTGGCGTAGTTTTGGGCTCCAACCACTGGCAAATAATATAAAAAATTAAAATAAAATTTTTTAAAAAATTTAATGTACCGCCTTGAAATCCACTGGTTTTCTCAAAGCAGTTTTGCAGTTTGCGACCTTTTTGTTTTTTGAAATAAGTTAACGGTTGGTCGTAAAGCACTTTATAGACCAGATGGCCAACCAACTCCTCGATTTTCAATTTTGGTAACCGATGCCGACCAAACTATTCATCAGACCGACTGACCGACATGTTGTCGGGTGAACTTTTTCTAGAATTTTTTTCTTCACCCCTAATTTGAACTGATGGAAAAACACTAGAAATTGGCATCTTGGTTTTTACTTTTTCTTAAGTGGTGTGCTGCACCATGCAGGAAAGTTATAATTCAACTTTTGCGTGGACGTGGACCTAAAGCAGTGCTCAAAAAAGCTGATGTGTTGGAAGCTTCCAAGCGTGAACTTGGGAGGGCTATCAATAGCAATGAATATACCAAGGTTAGCCACCATATTATTAAATTCACTCATTTGACTTTCTTTTCGCAAGAAGGAAAATTTTGAATAGATTTTAATCCTTATGCTACTGTTACATTGTGCGAGGATCTTTATTGTTCAGTGATTACGATGCTATCCTGTAACTAATCTCAGGACCAGTTTAACTCGTATGTTACTGTGGGTTGCAGATTTAAATGTTTTTCCTTAGAACTAAATTCTATTGATGACGTGGCATCCTCAAATAATAACGTTTGACAGAAATTTCACATTTGCTATACAAACTAGCAGAAGAAGATATTCAATCTACTGATTTATCAGTTTTGCTATACAAACTTCTCTCATTGTTTGACTTTTTCCCAAAAGAACTGAAATCTGAAAATTCTTCACCTAGTTATAATGCCAAGGTATCGAGTTGGCTCGTTTGTATTTATATCGGTCAGGCCTCTTGATTCTTACTCCAATTATCATTATTAAAGCAGTGTCATAGAGAATCTTTTCTTTCGTCGTTCTGGCAAGGGGTTGAAGAAGGGCTTGGTCATTTATCTAGTAAGTACTAGTACTATGTTCTCCAAGCTTGCTTGACTAATTATATAGCGGGGTTTTTGGGGGGCATAGAATTCAGGGATATCTCTGACTAACTGGAAGGAAAAAGAAAAGTAACCCCGCATGGTGAACCATTCCTTGTATGGGGATGAGATAACTTCTTACTTAAGCTAGTGCGAGCACCCAACAATATCTTTAATTCTGGCAGACATCTGGTGAATCATTGAATTTGTTTTTCCTCTCAACAAGAGCGAAGGGGACTGTACCAGATTTTGAGAGGTCTTACTAGCTTGATGTATCCCCTGGATTTCTGCTTTTAGAACATTGAAATCCTTGATGATTCATCTTTTCCTTCTCTGTAAACTCGATGAAGCCCTCTCATCTGGTGTCTCTGGAAGTTTTCTAGAGATCTAGTCACAACCTTTATTTTTTTTTTCAATTCATTGGATCTGCCCGCCCTGCATGTAGTTTTTCAGTTGTTGCACAGGATAGCAATTACAATTGGATCTCCTGCCTACCATATACCGGGGATAACTTTTGTCTCCACTGATAGCACCGTCAATCAGTGTTTTGATTTTATGCACTTACTGATAGACAATATTCTATCACGGGATTGGCTGATACAGTCATTATTTCCATAAATGTTTTCGACCACCTTCACCTGGTGTTACGGTATCCGGTTCTGGTTTTAACTACAATTGCTTTTTGAGCAGGTTATGAATGAAATTTGCGTGTCCCACGGTTCGTCTTGGGTCTTGAAGAGTGGCGATGGAAATTCAAGA

mRNA sequence

ATGGACCTGGACGACCTAGACGAACCGAGCCAGGTACCATCACGAACCTCCAGATTCGCACCGAAGACCTCTAAATTCAAGCCGAAGCCGAAATCGGAAGTAGTTCCGAAGCCGGAGCCCCAACAGCCGCCGACGAAACCGGAACCTGAACCTCCCGCTTCGAAGCCGGAACCAGAACTTGTGGAGCCGGATGCTGCAACTGGGGAGAAAAAGGAAGAAGGAGAAGAAGTTGAAGTGAAACCAAAAGTTGAATCCTCGCTTCCTAATGGCGTTGATAAAATGGACGTTGAAACTAAGTCTGAAGCTGAAGAGGAGACAATGGTGGATGATCCGATGGAAGAAGATGTTTCTGAAGATATGGTGGTTCGTGAAATCGACGTTCTGTTCACTCCTTCAGCTGACATCAATTCGAAGTTGTATGTATTGCAATATCCGCTGAGACCATGCTGGAGGCCCTATGAATTTGAGGGGCGATGTGAGGAGGTGAGAGTTAAACCTAGCAGTGGAGAAGTGGAAGTTGATCTGAATGTTGATATTGAATCCAATAACTATGACAGTAAAGCTGAGGGCAGTTTGCAAATGAAGAAGCAGACTTTGACATCTTCGTGGCAACCACCTCTAGCAACTACCTATGCTGTTGGGCTGCTTATGGGTAATAAGTTACACCTGAATCCCATACATGCAGTTGTGCAACTTCGACCATCAATTGAACACCTTAATTCTGGTGGCCCGAAAAGGAAAAATATTGTTAGAGGTGATCCAGATGTTAAACCAGAAGAGTCTATAGATGTTAACTCTGCAGTTGCATCAAGGAAGCAGAAAAAGCAAACTGGTTCTTCAACAGAGCTTAAAACTGGAGATGATGAGTGTTGGATTCCACTCAAGTACTATGGCCTAGAGAGTGATCTGTCAACCAGATATCAGCGAAGCATGGTGGCACAAAAAAGTTCCCCTATACAATTTTCAATGAGCCCGCATGACTATATGAACTCCTTGTGTCCTGGTGCGTGCACAAGCAGCATTAAGCCCAGGGGTCCATCTAAAAGGTATTTGCTTTCATTGTCTTTGGACGAACGGATTAAGAAATTGCTCAGCGAGGGACCTCCAGTTCAAAGATTCAGTGCACTTAAGCATTATGCCCCTGATTATGAAGCGGAAGAATTTATCGAAGCTCTTCAGCAGTATGCTCAGTTAGTGCAGGGTCTCTGGGTTGCAAAAAGTTCATTTCTACTTCCCCAAGATGGTGGCGGACGTTGTGCTAGAGATTTTGTTCTTTGTCTGTTTAGCAAGAATCCTCTTATCAGCTCATCACAGATAAATGTTCCAAAGTCTCTTCGGGACAAAGCGAAACATTTTCTGAATTTGTTCGCTGTCGAAAGACCTGCCTTTAAGGACTGGAAATTTAGGGAGAAAACAGATCGTTCATTTTTAAATAACTACCTGGATATTGTTCAGAAGCAAGAAAAGATATGGAGATCTGTAGAAGAAGGGATCACTAATTCCTTCCGGGGATCTGTCAAAAGTGGGTCCCATGCAAATGCTGCTACAGGAAAGCCTGACATAGTTCCTAAAACTGAAAAACAAGTCAGTTTTGACAAAGCTACGACAAAAAGTAGTAGTGCACCTCTCAACCGAAAAAGTACCATGTCAGATGAAACTCGAGAAGCTTTACCAAAAGCCCTTCAAAAGCTTTTTCAAAATCACAAGGTTTGCAGCTTTCAGTTGATATGTCAAGGTTTACGTGATTTGGCTGTGTCCCAGTCTACTCTTCCAAAAGCTGATGCCAGAATGGCGGTGGCTGCTGCATATGGTGTTGATGCTCCTCCGGATGAATTAAAAAAAATCATAGGCCAAGTTGCAACTGAGATTCATGGTCTCTATGTCATGACGTCATCTCCAGAGCATCCAGAATATGATCCATTAAGGAAAGTTATAATTCAACTTTTGCGTGGACGTGGACCTAAAGCAGTGCTCAAAAAAGCTGATGTGTTGGAAGCTTCCAAGCGTGAACTTGGGAGGGCTATCAATAGCAATGAATATACCAAGGTTATGAATGAAATTTGCGTGTCCCACGGTTCGTCTTGGGTCTTGAAGAGTGGCGATGGAAATTCAAGA

Coding sequence (CDS)

ATGGACCTGGACGACCTAGACGAACCGAGCCAGGTACCATCACGAACCTCCAGATTCGCACCGAAGACCTCTAAATTCAAGCCGAAGCCGAAATCGGAAGTAGTTCCGAAGCCGGAGCCCCAACAGCCGCCGACGAAACCGGAACCTGAACCTCCCGCTTCGAAGCCGGAACCAGAACTTGTGGAGCCGGATGCTGCAACTGGGGAGAAAAAGGAAGAAGGAGAAGAAGTTGAAGTGAAACCAAAAGTTGAATCCTCGCTTCCTAATGGCGTTGATAAAATGGACGTTGAAACTAAGTCTGAAGCTGAAGAGGAGACAATGGTGGATGATCCGATGGAAGAAGATGTTTCTGAAGATATGGTGGTTCGTGAAATCGACGTTCTGTTCACTCCTTCAGCTGACATCAATTCGAAGTTGTATGTATTGCAATATCCGCTGAGACCATGCTGGAGGCCCTATGAATTTGAGGGGCGATGTGAGGAGGTGAGAGTTAAACCTAGCAGTGGAGAAGTGGAAGTTGATCTGAATGTTGATATTGAATCCAATAACTATGACAGTAAAGCTGAGGGCAGTTTGCAAATGAAGAAGCAGACTTTGACATCTTCGTGGCAACCACCTCTAGCAACTACCTATGCTGTTGGGCTGCTTATGGGTAATAAGTTACACCTGAATCCCATACATGCAGTTGTGCAACTTCGACCATCAATTGAACACCTTAATTCTGGTGGCCCGAAAAGGAAAAATATTGTTAGAGGTGATCCAGATGTTAAACCAGAAGAGTCTATAGATGTTAACTCTGCAGTTGCATCAAGGAAGCAGAAAAAGCAAACTGGTTCTTCAACAGAGCTTAAAACTGGAGATGATGAGTGTTGGATTCCACTCAAGTACTATGGCCTAGAGAGTGATCTGTCAACCAGATATCAGCGAAGCATGGTGGCACAAAAAAGTTCCCCTATACAATTTTCAATGAGCCCGCATGACTATATGAACTCCTTGTGTCCTGGTGCGTGCACAAGCAGCATTAAGCCCAGGGGTCCATCTAAAAGGTATTTGCTTTCATTGTCTTTGGACGAACGGATTAAGAAATTGCTCAGCGAGGGACCTCCAGTTCAAAGATTCAGTGCACTTAAGCATTATGCCCCTGATTATGAAGCGGAAGAATTTATCGAAGCTCTTCAGCAGTATGCTCAGTTAGTGCAGGGTCTCTGGGTTGCAAAAAGTTCATTTCTACTTCCCCAAGATGGTGGCGGACGTTGTGCTAGAGATTTTGTTCTTTGTCTGTTTAGCAAGAATCCTCTTATCAGCTCATCACAGATAAATGTTCCAAAGTCTCTTCGGGACAAAGCGAAACATTTTCTGAATTTGTTCGCTGTCGAAAGACCTGCCTTTAAGGACTGGAAATTTAGGGAGAAAACAGATCGTTCATTTTTAAATAACTACCTGGATATTGTTCAGAAGCAAGAAAAGATATGGAGATCTGTAGAAGAAGGGATCACTAATTCCTTCCGGGGATCTGTCAAAAGTGGGTCCCATGCAAATGCTGCTACAGGAAAGCCTGACATAGTTCCTAAAACTGAAAAACAAGTCAGTTTTGACAAAGCTACGACAAAAAGTAGTAGTGCACCTCTCAACCGAAAAAGTACCATGTCAGATGAAACTCGAGAAGCTTTACCAAAAGCCCTTCAAAAGCTTTTTCAAAATCACAAGGTTTGCAGCTTTCAGTTGATATGTCAAGGTTTACGTGATTTGGCTGTGTCCCAGTCTACTCTTCCAAAAGCTGATGCCAGAATGGCGGTGGCTGCTGCATATGGTGTTGATGCTCCTCCGGATGAATTAAAAAAAATCATAGGCCAAGTTGCAACTGAGATTCATGGTCTCTATGTCATGACGTCATCTCCAGAGCATCCAGAATATGATCCATTAAGGAAAGTTATAATTCAACTTTTGCGTGGACGTGGACCTAAAGCAGTGCTCAAAAAAGCTGATGTGTTGGAAGCTTCCAAGCGTGAACTTGGGAGGGCTATCAATAGCAATGAATATACCAAGGTTATGAATGAAATTTGCGTGTCCCACGGTTCGTCTTGGGTCTTGAAGAGTGGCGATGGAAATTCAAGA

Protein sequence

MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKPEPEPPASKPEPELVEPDAATGEKKEEGEEVEVKPKVESSLPNGVDKMDVETKSEAEEETMVDDPMEEDVSEDMVVREIDVLFTPSADINSKLYVLQYPLRPCWRPYEFEGRCEEVRVKPSSGEVEVDLNVDIESNNYDSKAEGSLQMKKQTLTSSWQPPLATTYAVGLLMGNKLHLNPIHAVVQLRPSIEHLNSGGPKRKNIVRGDPDVKPEESIDVNSAVASRKQKKQTGSSTELKTGDDECWIPLKYYGLESDLSTRYQRSMVAQKSSPIQFSMSPHDYMNSLCPGACTSSIKPRGPSKRYLLSLSLDERIKKLLSEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQLVQGLWVAKSSFLLPQDGGGRCARDFVLCLFSKNPLISSSQINVPKSLRDKAKHFLNLFAVERPAFKDWKFREKTDRSFLNNYLDIVQKQEKIWRSVEEGITNSFRGSVKSGSHANAATGKPDIVPKTEKQVSFDKATTKSSSAPLNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAYGVDAPPDELKKIIGQVATEIHGLYVMTSSPEHPEYDPLRKVIIQLLRGRGPKAVLKKADVLEASKRELGRAINSNEYTKVMNEICVSHGSSWVLKSGDGNSR

Homology

[Close]

BLAST of MS012697 vs. NCBI nr
Match: XP_022136590.1 (DNA-directed RNA polymerase III subunit RPC5 [Momordica charantia])

HSP 1 Score: 1370.5 bits (3546), Expect = 0.0e+00
Identity = 704/705 (99.86%), Postives = 704/705 (99.86%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKPEPEPPASKPEPEL 60
           MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKPEPEPPASKPEPEL
Sbjct: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKPEPEPPASKPEPEL 60

Query: 61  VEPDAATGEKKEEGEEVEVKPKVESSLPNGVDKMDVETKSEAEEETMVDDPMEEDVSEDM 120
           VEPDAATGEKKEEGEEVEVKPKVESSLPNGVDKMDVETKSEAEEETMVDDPMEEDVSEDM
Sbjct: 61  VEPDAATGEKKEEGEEVEVKPKVESSLPNGVDKMDVETKSEAEEETMVDDPMEEDVSEDM 120

Query: 121 VVREIDVLFTPSADINSKLYVLQYPLRPCWRPYEFEGRCEEVRVKPSSGEVEVDLNVDIE 180
           VVREIDVLFTPSADINSKLYVLQYPLRPCWRPYEFEGRCEEVRVKPSSGEVEVDLNVDIE
Sbjct: 121 VVREIDVLFTPSADINSKLYVLQYPLRPCWRPYEFEGRCEEVRVKPSSGEVEVDLNVDIE 180

Query: 181 SNNYDSKAEGSLQMKKQTLTSSWQPPLATTYAVGLLMGNKLHLNPIHAVVQLRPSIEHLN 240
           SNNYDSKAEGSLQMKKQTLTSSWQPPLATTYAVGLLMGNKLHLNPIHAVVQLRPSIEHLN
Sbjct: 181 SNNYDSKAEGSLQMKKQTLTSSWQPPLATTYAVGLLMGNKLHLNPIHAVVQLRPSIEHLN 240

Query: 241 SGGPKRKNIVRGDPDVKPEESIDVNSAVASRKQKKQTGSSTELKTGDDECWIPLKYYGLE 300
           SGGPKRKNIVRGDPDVKPEESIDVNSAVASRKQKKQTGSSTELKTGDDECWIPLKYYGLE
Sbjct: 241 SGGPKRKNIVRGDPDVKPEESIDVNSAVASRKQKKQTGSSTELKTGDDECWIPLKYYGLE 300

Query: 301 SDLSTRYQRSMVAQKSSPIQFSMSPHDYMNSLCPGACTSSIKPRGPSKRYLLSLSLDERI 360
           SDLSTRYQRSMVAQKSSPIQFSMSP DYMNSLCPGACTSSIKPRGPSKRYLLSLSLDERI
Sbjct: 301 SDLSTRYQRSMVAQKSSPIQFSMSPDDYMNSLCPGACTSSIKPRGPSKRYLLSLSLDERI 360

Query: 361 KKLLSEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQLVQGLWVAKSSFLLPQDGGGRCA 420
           KKLLSEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQLVQGLWVAKSSFLLPQDGGGRCA
Sbjct: 361 KKLLSEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQLVQGLWVAKSSFLLPQDGGGRCA 420

Query: 421 RDFVLCLFSKNPLISSSQINVPKSLRDKAKHFLNLFAVERPAFKDWKFREKTDRSFLNNY 480
           RDFVLCLFSKNPLISSSQINVPKSLRDKAKHFLNLFAVERPAFKDWKFREKTDRSFLNNY
Sbjct: 421 RDFVLCLFSKNPLISSSQINVPKSLRDKAKHFLNLFAVERPAFKDWKFREKTDRSFLNNY 480

Query: 481 LDIVQKQEKIWRSVEEGITNSFRGSVKSGSHANAATGKPDIVPKTEKQVSFDKATTKSSS 540
           LDIVQKQEKIWRSVEEGITNSFRGSVKSGSHANAATGKPDIVPKTEKQVSFDKATTKSSS
Sbjct: 481 LDIVQKQEKIWRSVEEGITNSFRGSVKSGSHANAATGKPDIVPKTEKQVSFDKATTKSSS 540

Query: 541 APLNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVA 600
           APLNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVA
Sbjct: 541 APLNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVA 600

Query: 601 AAYGVDAPPDELKKIIGQVATEIHGLYVMTSSPEHPEYDPLRKVIIQLLRGRGPKAVLKK 660
           AAYGVDAPPDELKKIIGQVATEIHGLYVMTSSPEHPEYDPLRKVIIQLLRGRGPKAVLKK
Sbjct: 601 AAYGVDAPPDELKKIIGQVATEIHGLYVMTSSPEHPEYDPLRKVIIQLLRGRGPKAVLKK 660

Query: 661 ADVLEASKRELGRAINSNEYTKVMNEICVSHGSSWVLKSGDGNSR 706
           ADVLEASKRELGRAINSNEYTKVMNEICVSHGSSWVLKSGDGNSR
Sbjct: 661 ADVLEASKRELGRAINSNEYTKVMNEICVSHGSSWVLKSGDGNSR 705

[Close]

BLAST of MS012697 vs. NCBI nr
Match: XP_038876785.1 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Benincasa hispida])

HSP 1 Score: 1196.0 bits (3093), Expect = 0.0e+00
Identity = 619/706 (87.68%), Postives = 650/706 (92.07%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKPEPEPPASKPEPEL 60
           MDLDDLDE SQV SRTSRFAPK SKFKPKPKSEVVPKPEPQQPPTK EP+PP SK  PE+
Sbjct: 1   MDLDDLDEQSQVRSRTSRFAPKASKFKPKPKSEVVPKPEPQQPPTKSEPQPPVSK--PEV 60

Query: 61  VEPDAATGEKKEEGEEVEVKPKVESSLPNGVDKMDVETKSEAEEETMV-DDPMEEDVSED 120
            EPDA  GEKKEEGEEVE+KPKVE SLPNGV KMDVETKSE EEETMV DDPMEED SED
Sbjct: 61  TEPDARIGEKKEEGEEVEIKPKVEPSLPNGVAKMDVETKSEVEEETMVDDDPMEEDASED 120

Query: 121 MVVREIDVLFTPSADINSKLYVLQYPLRPCWRPYEFEGRCEEVRVKPSSGEVEVDLNVDI 180
           MVVREIDVLFTPS DIN+KLYVLQYPLRP WRPYEFEGRC+EVRVKPSSGEVEVDLNVDI
Sbjct: 121 MVVREIDVLFTPSPDINTKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSSGEVEVDLNVDI 180

Query: 181 ESNNYDSKAEGSLQMKKQTLTSSWQPPLATTYAVGLLMGNKLHLNPIHAVVQLRPSIEHL 240
           ESNNYDSKA+GSLQMKKQTLTSSWQPPLAT+YAVGLLMGNKLHLNP+HAVVQLRPS EHL
Sbjct: 181 ESNNYDSKADGSLQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHL 240

Query: 241 NSGGPKRKNIVRGDPDVKPEESIDVNSAVASRKQKKQTGSSTELKTGDDECWIPLKYYGL 300
           NSGGPKRKN VR DPDVK EE +DVNSA ASRKQKKQTG STELKTGD+ECWIPLKYYG 
Sbjct: 241 NSGGPKRKNSVRADPDVKSEEHVDVNSAGASRKQKKQTGPSTELKTGDEECWIPLKYYGQ 300

Query: 301 ESDLSTRYQRSMVAQKSSPIQFSMSPHDYMNSLCPGACTSSIKPRGPSKRYLLSLSLDER 360
           ESDLSTR+ RSMVAQ ++P+QFSMSP DYM+SLCPG  TSS KP+GPSKRYLLSLSL+ER
Sbjct: 301 ESDLSTRHLRSMVAQTAAPMQFSMSPLDYMDSLCPGTSTSSNKPKGPSKRYLLSLSLEER 360

Query: 361 IKKLLSEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQLVQGLWVAKSSFLLPQDGGGRC 420
           IKKLL+EGPPVQRFSALKHYAPDYEAEEFIEALQQYAQ VQGLWV KSS LLPQD  GRC
Sbjct: 361 IKKLLTEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQSVQGLWVPKSSVLLPQDASGRC 420

Query: 421 ARDFVLCLFSKNPLISSSQINVPKSLRDKAKHFLNLFAVERPAFKDWKFREKTDRSFLNN 480
           ARDFVL LFSKNP++SSSQINVPKSLR+K KHFLNLF VERPAFKDWKF+EKTD  FL+N
Sbjct: 421 ARDFVLNLFSKNPVVSSSQINVPKSLREKVKHFLNLFGVERPAFKDWKFKEKTDHLFLSN 480

Query: 481 YLDIVQKQEKIWRSVEEGITNSFRGSVKSGSHANAATGKPDIVPKTEKQVSFDKATTKSS 540
           Y+D+VQKQEKIWRSVEEGI+  F GS KS SHANAATGKPD+V K EKQVS DKAT KSS
Sbjct: 481 YVDLVQKQEKIWRSVEEGISKIFHGSGKSVSHANAATGKPDMVSKPEKQVSNDKATIKSS 540

Query: 541 SAPLNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAV 600
           +A LNRKSTMSDETREALPKALQKLF NHKVCSFQLICQGLRDLAVSQSTLPKADARMAV
Sbjct: 541 NAALNRKSTMSDETREALPKALQKLFHNHKVCSFQLICQGLRDLAVSQSTLPKADARMAV 600

Query: 601 AAAYGVDAPPDELKKIIGQVATEIHGLYVMTSSPEHPEYDPLRKVIIQLLRGRGPKAVLK 660
           AAAYGVDAPPDELKKII QVATEIHGLYV+TSSPEHPEYDPLRKV+IQLLRGRGPKAVLK
Sbjct: 601 AAAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLK 660

Query: 661 KADVLEASKRELGRAINSNEYTKVMNEICVSHGSSWVLKSGDGNSR 706
           KADVLEASKRELGR I SNEY+KVMNEICVSHGSSW LKSGDGNSR
Sbjct: 661 KADVLEASKRELGRGITSNEYSKVMNEICVSHGSSWALKSGDGNSR 704

[Close]

BLAST of MS012697 vs. NCBI nr
Match: XP_022985072.1 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita maxima] >XP_022985073.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita maxima] >XP_022985074.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1195.3 bits (3091), Expect = 0.0e+00
Identity = 614/708 (86.72%), Postives = 656/708 (92.66%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKPEPEPPASKPEPEL 60
           MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPK+EVVPKPEPQQPPTK EPE P   PEPE+
Sbjct: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKTEVVPKPEPQQPPTKLEPETPV--PEPEV 60

Query: 61  VEPDAATGEKKEEGEEVEVKPKVESSLPNGVDKMDVETKSEAEEETMV---DDPMEEDVS 120
            EPDA  GEKKEEGEEVEVKPKVE+SLPNGVDKMDVETK E EEETMV   DDPMEED S
Sbjct: 61  AEPDALIGEKKEEGEEVEVKPKVEASLPNGVDKMDVETKLEVEEETMVDDDDDPMEEDAS 120

Query: 121 EDMVVREIDVLFTPSADINSKLYVLQYPLRPCWRPYEFEGRCEEVRVKPSSGEVEVDLNV 180
           EDMVVREIDVLFTPS DIN+KLYVLQYPLRP WRPYEFEGRC+EVRVKP++GEVEVDLNV
Sbjct: 121 EDMVVREIDVLFTPSLDINTKLYVLQYPLRPRWRPYEFEGRCDEVRVKPTTGEVEVDLNV 180

Query: 181 DIESNNYDSKAEGSLQMKKQTLTSSWQPPLATTYAVGLLMGNKLHLNPIHAVVQLRPSIE 240
           DIESNNYDSKA+ +LQMKKQTL SSWQPP+AT+YAVGLLMG+KLHLNP+H VVQLRPS E
Sbjct: 181 DIESNNYDSKADANLQMKKQTLKSSWQPPMATSYAVGLLMGDKLHLNPVHTVVQLRPSFE 240

Query: 241 HLNSGGPKRKNIVRGDPDVKPEESIDVNSAVASRKQKKQTGSSTELKTGDDECWIPLKYY 300
           HLNSGGPKRK  VR DP+VK EE  DVNSA  SRKQKKQTG STE KTGD+ECWIPLKYY
Sbjct: 241 HLNSGGPKRKINVRADPNVKSEEHTDVNSAGGSRKQKKQTGPSTEPKTGDEECWIPLKYY 300

Query: 301 GLESDLSTRYQRSMVAQKSSPIQFSMSPHDYMNSLCPGACTSSIKPRGPSKRYLLSLSLD 360
           GLESDLSTR+ RSMVAQK+SP+QFSMSPHDY++SLCPGA +S  KP+GPSKR+LLSLSL+
Sbjct: 301 GLESDLSTRHLRSMVAQKNSPMQFSMSPHDYVDSLCPGASSSRNKPKGPSKRFLLSLSLE 360

Query: 361 ERIKKLLSEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQLVQGLWVAKSSFLLPQDGGG 420
           ERIKKLL+EGPP+QRFSALKHYAPDYE +EFIEALQQYAQ VQGLWVAKSSFLLPQDG G
Sbjct: 361 ERIKKLLTEGPPIQRFSALKHYAPDYEPDEFIEALQQYAQSVQGLWVAKSSFLLPQDGSG 420

Query: 421 RCARDFVLCLFSKNPLISSSQINVPKSLRDKAKHFLNLFAVERPAFKDWKFREKTDRSFL 480
           RCARDFVL LFSKNP++SSSQINVPKSLRDK KHFLN F VERPAFKDW+F+EKTDR FL
Sbjct: 421 RCARDFVLSLFSKNPVVSSSQINVPKSLRDKVKHFLNWFGVERPAFKDWRFKEKTDRLFL 480

Query: 481 NNYLDIVQKQEKIWRSVEEGITNSFRGSVKSGSHANAATGKPDIVPKTEKQVSFDKATTK 540
           NNY+DIVQKQEK+WRSVEEGITNSFRGSVK+ SHANAA  KP++VPK EKQV  DKA+TK
Sbjct: 481 NNYVDIVQKQEKVWRSVEEGITNSFRGSVKNMSHANAAPVKPEMVPKPEKQVIHDKASTK 540

Query: 541 SSSAPLNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARM 600
           SS+A LNRKSTMSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARM
Sbjct: 541 SSNAALNRKSTMSDETREALPKALQKLFQTHKVCSFQLICQGLRDLAVSQSTLPKADARM 600

Query: 601 AVAAAYGVDAPPDELKKIIGQVATEIHGLYVMTSSPEHPEYDPLRKVIIQLLRGRGPKAV 660
           AVAAAYGVDAPPDELK+II QVATEIHGLYV+TSSPEHPEYDPLRKV+IQLLRGRGPKAV
Sbjct: 601 AVAAAYGVDAPPDELKRIICQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAV 660

Query: 661 LKKADVLEASKRELGRAINSNEYTKVMNEICVSHGSSWVLKSGDGNSR 706
           LKKADVLEASKRELGRAINSNEY+KVMNEICVSHGSSW LKSGDGNSR
Sbjct: 661 LKKADVLEASKRELGRAINSNEYSKVMNEICVSHGSSWALKSGDGNSR 706

[Close]

BLAST of MS012697 vs. NCBI nr
Match: XP_022929283.1 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita moschata] >XP_022929284.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita moschata] >XP_022929285.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita moschata] >XP_022929286.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita moschata] >XP_022929287.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita moschata] >XP_022929288.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1191.0 bits (3080), Expect = 0.0e+00
Identity = 612/707 (86.56%), Postives = 655/707 (92.64%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKPEPEPPASKPEPEL 60
           MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTK EPE P SK  PE+
Sbjct: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKLEPETPVSK--PEV 60

Query: 61  VEPDAATGEKKEEGEEVEVKPKVESSLPNGVDKMDVETKSEAEEETMV--DDPMEEDVSE 120
            EPDA  GEKKEEGEEVEVKPKVE+SLPNGVDKMDVETK E EEETMV  DDPMEED SE
Sbjct: 61  AEPDALIGEKKEEGEEVEVKPKVEASLPNGVDKMDVETKLEVEEETMVEDDDPMEEDASE 120

Query: 121 DMVVREIDVLFTPSADINSKLYVLQYPLRPCWRPYEFEGRCEEVRVKPSSGEVEVDLNVD 180
           DMVVREIDVLFTPS DIN+KLYVLQYPLRP WRPYEFEGRC+EVRVKP++GEVEVDLNVD
Sbjct: 121 DMVVREIDVLFTPSVDINTKLYVLQYPLRPRWRPYEFEGRCDEVRVKPTTGEVEVDLNVD 180

Query: 181 IESNNYDSKAEGSLQMKKQTLTSSWQPPLATTYAVGLLMGNKLHLNPIHAVVQLRPSIEH 240
           IESNNYDSKA+ +LQMKKQTL SSWQPP+AT+YAVGLLMG+KLHLNP+H VVQLRPS EH
Sbjct: 181 IESNNYDSKADANLQMKKQTLKSSWQPPMATSYAVGLLMGDKLHLNPVHTVVQLRPSFEH 240

Query: 241 LNSGGPKRKNIVRGDPDVKPEESIDVNSAVASRKQKKQTGSSTELKTGDDECWIPLKYYG 300
           LNSGGPKRK  VR DP+VK EE  DVNSA  SRKQKKQTG STE KTGD+E WIPLKYYG
Sbjct: 241 LNSGGPKRKINVRADPNVKSEEHTDVNSAGGSRKQKKQTGPSTEPKTGDEESWIPLKYYG 300

Query: 301 LESDLSTRYQRSMVAQKSSPIQFSMSPHDYMNSLCPGACTSSIKPRGPSKRYLLSLSLDE 360
           LESDLSTR+ RSMVA+K+SP+QFSMSPHDY++SLCPGA +S  KP+GPSKR+LLSLSL+E
Sbjct: 301 LESDLSTRHLRSMVAEKNSPMQFSMSPHDYVDSLCPGASSSRNKPKGPSKRFLLSLSLEE 360

Query: 361 RIKKLLSEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQLVQGLWVAKSSFLLPQDGGGR 420
           RIKKLL+EGPP+QRFSALKHYAPDYE +EFIEALQQYAQ VQGLWVAKSSFLLPQDG GR
Sbjct: 361 RIKKLLTEGPPIQRFSALKHYAPDYEPDEFIEALQQYAQSVQGLWVAKSSFLLPQDGSGR 420

Query: 421 CARDFVLCLFSKNPLISSSQINVPKSLRDKAKHFLNLFAVERPAFKDWKFREKTDRSFLN 480
           CARDFVL LFSKNP++SSSQINVPKSLRDK KHFLN F VERPAFKDW+F+EKTDR FLN
Sbjct: 421 CARDFVLSLFSKNPVVSSSQINVPKSLRDKVKHFLNWFGVERPAFKDWRFKEKTDRLFLN 480

Query: 481 NYLDIVQKQEKIWRSVEEGITNSFRGSVKSGSHANAATGKPDIVPKTEKQVSFDKATTKS 540
           NY+DIVQKQEK+WRSVEEGITNSFRGSVK+ SHANAA  KP++VPK EKQV  DKA+TKS
Sbjct: 481 NYVDIVQKQEKVWRSVEEGITNSFRGSVKNMSHANAAPVKPEMVPKPEKQVIHDKASTKS 540

Query: 541 SSAPLNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMA 600
           S+A LNRKSTMSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARMA
Sbjct: 541 SNAALNRKSTMSDETREALPKALQKLFQTHKVCSFQLICQGLRDLAVSQSTLPKADARMA 600

Query: 601 VAAAYGVDAPPDELKKIIGQVATEIHGLYVMTSSPEHPEYDPLRKVIIQLLRGRGPKAVL 660
           VAAAYGVDAPPDELK+II QVATEIHGLYV+TSSPEHPEYDPLRKV+IQLLRGRGPKAVL
Sbjct: 601 VAAAYGVDAPPDELKRIICQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVL 660

Query: 661 KKADVLEASKRELGRAINSNEYTKVMNEICVSHGSSWVLKSGDGNSR 706
           KKADVLEASKRELGRAINSNEY+KVMNEICVSHGS+W LKSGDGNSR
Sbjct: 661 KKADVLEASKRELGRAINSNEYSKVMNEICVSHGSAWALKSGDGNSR 705

[Close]

BLAST of MS012697 vs. NCBI nr
Match: XP_023552355.1 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552356.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552357.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552358.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1187.9 bits (3072), Expect = 0.0e+00
Identity = 611/707 (86.42%), Postives = 654/707 (92.50%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKPEPEPPASKPEPEL 60
           MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQP TK EPEPP SK  PE+
Sbjct: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPTTKLEPEPPVSK--PEV 60

Query: 61  VEPDAATGEKKEEGEEVEVKPKVESSLPNGVDKMDVETKSEAEEETMV--DDPMEEDVSE 120
            EPDA  GEKKEEGEEVEVKPKVE+SLPNGVDKMDVETK E EEETMV  DDPMEED SE
Sbjct: 61  AEPDALIGEKKEEGEEVEVKPKVEASLPNGVDKMDVETKLEVEEETMVEDDDPMEEDASE 120

Query: 121 DMVVREIDVLFTPSADINSKLYVLQYPLRPCWRPYEFEGRCEEVRVKPSSGEVEVDLNVD 180
           DMVVREIDVLFTPS DIN+KLYVLQYPLRP WRPYEFEGRC+EVRVKP++GEVEVDLNVD
Sbjct: 121 DMVVREIDVLFTPSVDINTKLYVLQYPLRPRWRPYEFEGRCDEVRVKPTTGEVEVDLNVD 180

Query: 181 IESNNYDSKAEGSLQMKKQTLTSSWQPPLATTYAVGLLMGNKLHLNPIHAVVQLRPSIEH 240
           IESNNYDSKA+ +LQMKKQTL SSWQPP+AT+YAVGLLMG+KLHLNP+H VVQLRPS EH
Sbjct: 181 IESNNYDSKADANLQMKKQTLKSSWQPPMATSYAVGLLMGDKLHLNPVHTVVQLRPSFEH 240

Query: 241 LNSGGPKRKNIVRGDPDVKPEESIDVNSAVASRKQKKQTGSSTELKTGDDECWIPLKYYG 300
           LNSGGPKRK  VR DP+VK EE  DVNSA  SRKQKKQTG STE KT D+ECWIPLKYYG
Sbjct: 241 LNSGGPKRKINVRADPNVKSEEHTDVNSAGGSRKQKKQTGPSTEPKTVDEECWIPLKYYG 300

Query: 301 LESDLSTRYQRSMVAQKSSPIQFSMSPHDYMNSLCPGACTSSIKPRGPSKRYLLSLSLDE 360
           LESDLSTR+ RSMVAQK+SP+QFSMSPHDY++SLCPGA +S  KP+GPSKR+LLSLSL+E
Sbjct: 301 LESDLSTRHLRSMVAQKNSPMQFSMSPHDYVDSLCPGASSSRNKPKGPSKRFLLSLSLEE 360

Query: 361 RIKKLLSEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQLVQGLWVAKSSFLLPQDGGGR 420
           RIKKLL+EGPP++RFSALKHYAPDYE +EFIEALQQYAQ VQGLWVAKSSFLLPQDG GR
Sbjct: 361 RIKKLLTEGPPIRRFSALKHYAPDYEPDEFIEALQQYAQSVQGLWVAKSSFLLPQDGSGR 420

Query: 421 CARDFVLCLFSKNPLISSSQINVPKSLRDKAKHFLNLFAVERPAFKDWKFREKTDRSFLN 480
           CARDFVL LFSKNP++SSSQINVPKSLRDK KHFLN F VERPAFKDW+F+EKTDR FLN
Sbjct: 421 CARDFVLSLFSKNPVVSSSQINVPKSLRDKVKHFLNWFGVERPAFKDWRFKEKTDRLFLN 480

Query: 481 NYLDIVQKQEKIWRSVEEGITNSFRGSVKSGSHANAATGKPDIVPKTEKQVSFDKATTKS 540
           NY+DIVQKQEK+WRSVEEGITNSFRGSVK+ SHANAA  KP++VPK EKQV  DKA+TKS
Sbjct: 481 NYVDIVQKQEKVWRSVEEGITNSFRGSVKNMSHANAAPVKPEMVPKPEKQVIHDKASTKS 540

Query: 541 SSAPLNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMA 600
           S+A LNR+STMSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARMA
Sbjct: 541 SNAALNRRSTMSDETREALPKALQKLFQTHKVCSFQLICQGLRDLAVSQSTLPKADARMA 600

Query: 601 VAAAYGVDAPPDELKKIIGQVATEIHGLYVMTSSPEHPEYDPLRKVIIQLLRGRGPKAVL 660
           VAAAYGVDAPPDELK+II QVATEIHGLYV+TSS EHPEYDPLRKV+IQLLRGRGPKAVL
Sbjct: 601 VAAAYGVDAPPDELKRIICQVATEIHGLYVLTSSSEHPEYDPLRKVVIQLLRGRGPKAVL 660

Query: 661 KKADVLEASKRELGRAINSNEYTKVMNEICVSHGSSWVLKSGDGNSR 706
           KKADVLEASKRELGRAINSNEY+KVMNEICVSHGSSW LKSGDGNSR
Sbjct: 661 KKADVLEASKRELGRAINSNEYSKVMNEICVSHGSSWALKSGDGNSR 705

[Close]

BLAST of MS012697 vs. ExPASy Swiss-Prot
Match: Q9NVU0 (DNA-directed RNA polymerase III subunit RPC5 OS=Homo sapiens OX=9606 GN=POLR3E PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 9.9e-31
Identity = 115/426 (27.00%), Postives = 186/426 (43.66%), Query Frame = 0


Query: 118 EDMVVREIDVLFTPSADINSKLYVLQYPLRPCWRPYEFEGRCEEVRVKPSSGEVEVDLNV 177
           +D VV+EIDV    S  +  KLY+ QYP+RP    Y+        ++KP   +VE+++ +
Sbjct: 6   DDPVVQEIDVYLAKS--LAEKLYLFQYPVRPASMTYDDIPHL-SAKIKPKQQKVELEMAI 65

Query: 178 DIESNNY------------------DSKAEGSLQMKKQTLTSSWQPPLATTYAVGLLMGN 237
           D  + NY                  ++    S  M KQT  SS      + YA  L    
Sbjct: 66  DTLNPNYCRSKGEQIALNVDGACADETSTYSSKLMDKQTFCSSQTTSNTSRYAAALYRQG 125

Query: 238 KLHLNPIHAVVQLRPSIEHLNSGGPKRKNIVRGDP--DVKPEESIDVNSAVASR------ 297
           +LHL P+H ++QLRPS  +L+    K +     +   D   +E+ D    +  R      
Sbjct: 126 ELHLTPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEDDVKQITVRFSRPES 185

Query: 298 ---KQKKQTGSSTELKTGDDECWIPLKYYGLESDLSTRYQRSMVAQKSSPI---QFSMSP 357
              +Q++        K   +E W+ L YYGL    S   ++ ++   SS +   +   SP
Sbjct: 186 EQARQRRVQSYEFLQKKHAEEPWVHLHYYGLRDSRSEHERQYLLCPGSSGVENTELVKSP 245

Query: 358 HDYMNSLCPGAC-TSSIKPRGPSK----RYLLSLSLDERIKKLLSEGPPVQRFSALKHYA 417
            +Y+  L P +      KP  PS       L +L L ++IK L+     +   + +    
Sbjct: 246 SEYLMMLMPPSQEEEKDKPVAPSNVLSMAQLRTLPLADQIKILMKNVKVMPFANLMSLLG 305

Query: 418 PDYEAEEFIEALQQYAQLVQGLWVAKSSFLLPQDGGG---------RC-ARDFVLCLFSK 477
           P  ++   +  +Q+ A LVQG WV KS  L P+D             C  RDFV+  F++
Sbjct: 306 PSIDSVAVLRGIQKVAMLVQGNWVVKSDILYPKDSSSPHSGVPAEVLCRGRDFVMWKFTQ 365

Query: 478 NPLISSSQI-NVPKSLRDKAKHFLNLFAVERPAFKDWKFREKTDRSFLNNYLDIVQKQEK 496
           +  +   ++  V K   +  K FL   AV R   K W+F    D  F+  + D+VQ+Q  
Sbjct: 366 SRWVVRKEVATVTKLCAEDVKDFLEHMAVVR-INKGWEFILPYDGEFIKKHPDVVQRQHM 425

[Close]

BLAST of MS012697 vs. ExPASy Swiss-Prot
Match: Q9CZT4 (DNA-directed RNA polymerase III subunit RPC5 OS=Mus musculus OX=10090 GN=Polr3e PE=1 SV=2)

HSP 1 Score: 133.7 bits (335), Expect = 8.4e-30
Identity = 126/487 (25.87%), Postives = 206/487 (42.30%), Query Frame = 0


Query: 118 EDMVVREIDVLFTPSADINSKLYVLQYPLRPCWRPYEFEGRCEEVRVKPSSGEVEVDLNV 177
           +D V++EIDV    S  +  KLY+ QYP+RP    Y+        ++KP   +VE+++ +
Sbjct: 6   DDPVIQEIDVYLAKS--LAEKLYLFQYPVRPASMTYDDIPHL-SAKIKPKQQKVELEMAI 65

Query: 178 DIESNNY------------------DSKAEGSLQMKKQTLTSSWQPPLATTYAVGLLMGN 237
           D  + NY                  ++    S  M KQT  SS        YA  L    
Sbjct: 66  DTLNPNYCRSKGEQIALNVDGACADETSTYSSKLMDKQTFCSSQTTSNTARYAAALYRQG 125

Query: 238 KLHLNPIHAVVQLRPSIEHLNSGGPKRK-----NIVRGDPDVKPEESIDVNSAVASRKQK 297
           +LHL P+H ++QLRPS  +L+    K +     N        + EE +   +   SR + 
Sbjct: 126 ELHLTPLHGILQLRPSFSYLDKADAKHREREAANEAGDSSQDEAEEDVKQITVRFSRPES 185

Query: 298 KQTG----SSTEL--KTGDDECWIPLKYYGLESDLSTRYQRSMVAQKSSPI---QFSMSP 357
           +Q       S E   K   +E W+ L YYG+    S   ++ ++ Q SS +   +   SP
Sbjct: 186 EQARQRRVQSYEFLQKKHAEEPWVHLHYYGMRDSRSEHERQYLLCQGSSGVENTELVKSP 245

Query: 358 HDYMNSLCPGAC-TSSIKPRGPSK----RYLLSLSLDERIKKLLSEGPPVQRFSALKHYA 417
            +Y+  L P +      KP  PS       L +L L ++IK L+     +   + +    
Sbjct: 246 SEYLMMLMPPSPEEEKDKPVAPSNVLSMAQLRTLPLADQIKVLMKNVKVMPFANLMSLLG 305

Query: 418 PDYEAEEFIEALQQYAQLVQGLWVAKSSFLLPQDGGG---------RC-ARDFVLCLFSK 477
           P  ++   +  +Q+ A LVQG WV KS  L P+D             C  RDFV+  F++
Sbjct: 306 PSVDSVAVLRGIQKVAMLVQGNWVVKSDILYPKDSSSPHSGMPAEVLCRGRDFVMWKFTQ 365

Query: 478 NPLISSSQI-NVPKSLRDKAKHFLNLFAVERPAFKDWKFREKTDRSFLNNYLDIVQKQEK 537
           +  +   ++  V K   +  K FL   AV R   K W+F    D  F+  + D+VQ+Q  
Sbjct: 366 SRWVVRKEVAAVTKLCAEDVKDFLEHMAVVR-INKGWEFLLPYDLEFIKKHPDVVQRQHM 425

Query: 538 IWRSVEEGITNSFRGSVKSGSHANAATGKPDIVPKTEKQVSFDKATTKSSSAPLNRKSTM 557
           +W  ++  +   +    ++          P  +   E++V   K   + + A L R+   
Sbjct: 426 LWSGIQAKLEKVYNLVKETMPKKPDGQSAPVGLVSGEQRVQTAKTKAQQNHAFLERELQR 485

[Close]

BLAST of MS012697 vs. ExPASy Swiss-Prot
Match: O74883 (DNA-directed RNA polymerase III subunit rpc5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpc37 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 5.7e-10
Identity = 53/156 (33.97%), Postives = 82/156 (52.56%), Query Frame = 0


Query: 100 SEAEEETMVDDPMEEDVSE--DMVVREIDVLFTPSADINSKLYVLQYPLRPCWRPY-EFE 159
           S +E++ M +  +  D +E  D VVR   V F+P   + + L + Q+PLRP  R Y +  
Sbjct: 2   SFSEDQAMEEAKLRNDETEEQDPVVRTYPVFFSPG--LRNNLLLNQFPLRPKNRTYSDAN 61

Query: 160 GRCE-EVRVKPSSGEVEVDLNVDIESNNYDSKA----EGSLQMKKQTLTSSWQPPLATTY 219
           G    +VRVKP +G +EVD+ +       + KA     G   ++ QTL+   Q P  T  
Sbjct: 62  GEAPIDVRVKPKTGWMEVDVPIPTTKYYNEDKAMKYGNGKKPIQTQTLSGRLQKP-RTNL 121

Query: 220 AVGLLMGNKLHLNPIHAVVQLRPSIEHLNSGGPKRK 248
            VGL+   + H+ P+  + QLRPS++H+N    K K
Sbjct: 122 MVGLIRDGQFHIVPLRGLTQLRPSMKHVNEYTQKLK 154

[Close]

BLAST of MS012697 vs. ExPASy TrEMBL
Match: A0A6J1C4C6 (DNA-directed RNA polymerase III subunit RPC5 OS=Momordica charantia OX=3673 GN=LOC111008259 PE=4 SV=1)

HSP 1 Score: 1370.5 bits (3546), Expect = 0.0e+00
Identity = 704/705 (99.86%), Postives = 704/705 (99.86%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKPEPEPPASKPEPEL 60
           MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKPEPEPPASKPEPEL
Sbjct: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKPEPEPPASKPEPEL 60

Query: 61  VEPDAATGEKKEEGEEVEVKPKVESSLPNGVDKMDVETKSEAEEETMVDDPMEEDVSEDM 120
           VEPDAATGEKKEEGEEVEVKPKVESSLPNGVDKMDVETKSEAEEETMVDDPMEEDVSEDM
Sbjct: 61  VEPDAATGEKKEEGEEVEVKPKVESSLPNGVDKMDVETKSEAEEETMVDDPMEEDVSEDM 120

Query: 121 VVREIDVLFTPSADINSKLYVLQYPLRPCWRPYEFEGRCEEVRVKPSSGEVEVDLNVDIE 180
           VVREIDVLFTPSADINSKLYVLQYPLRPCWRPYEFEGRCEEVRVKPSSGEVEVDLNVDIE
Sbjct: 121 VVREIDVLFTPSADINSKLYVLQYPLRPCWRPYEFEGRCEEVRVKPSSGEVEVDLNVDIE 180

Query: 181 SNNYDSKAEGSLQMKKQTLTSSWQPPLATTYAVGLLMGNKLHLNPIHAVVQLRPSIEHLN 240
           SNNYDSKAEGSLQMKKQTLTSSWQPPLATTYAVGLLMGNKLHLNPIHAVVQLRPSIEHLN
Sbjct: 181 SNNYDSKAEGSLQMKKQTLTSSWQPPLATTYAVGLLMGNKLHLNPIHAVVQLRPSIEHLN 240

Query: 241 SGGPKRKNIVRGDPDVKPEESIDVNSAVASRKQKKQTGSSTELKTGDDECWIPLKYYGLE 300
           SGGPKRKNIVRGDPDVKPEESIDVNSAVASRKQKKQTGSSTELKTGDDECWIPLKYYGLE
Sbjct: 241 SGGPKRKNIVRGDPDVKPEESIDVNSAVASRKQKKQTGSSTELKTGDDECWIPLKYYGLE 300

Query: 301 SDLSTRYQRSMVAQKSSPIQFSMSPHDYMNSLCPGACTSSIKPRGPSKRYLLSLSLDERI 360
           SDLSTRYQRSMVAQKSSPIQFSMSP DYMNSLCPGACTSSIKPRGPSKRYLLSLSLDERI
Sbjct: 301 SDLSTRYQRSMVAQKSSPIQFSMSPDDYMNSLCPGACTSSIKPRGPSKRYLLSLSLDERI 360

Query: 361 KKLLSEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQLVQGLWVAKSSFLLPQDGGGRCA 420
           KKLLSEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQLVQGLWVAKSSFLLPQDGGGRCA
Sbjct: 361 KKLLSEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQLVQGLWVAKSSFLLPQDGGGRCA 420

Query: 421 RDFVLCLFSKNPLISSSQINVPKSLRDKAKHFLNLFAVERPAFKDWKFREKTDRSFLNNY 480
           RDFVLCLFSKNPLISSSQINVPKSLRDKAKHFLNLFAVERPAFKDWKFREKTDRSFLNNY
Sbjct: 421 RDFVLCLFSKNPLISSSQINVPKSLRDKAKHFLNLFAVERPAFKDWKFREKTDRSFLNNY 480

Query: 481 LDIVQKQEKIWRSVEEGITNSFRGSVKSGSHANAATGKPDIVPKTEKQVSFDKATTKSSS 540
           LDIVQKQEKIWRSVEEGITNSFRGSVKSGSHANAATGKPDIVPKTEKQVSFDKATTKSSS
Sbjct: 481 LDIVQKQEKIWRSVEEGITNSFRGSVKSGSHANAATGKPDIVPKTEKQVSFDKATTKSSS 540

Query: 541 APLNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVA 600
           APLNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVA
Sbjct: 541 APLNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVA 600

Query: 601 AAYGVDAPPDELKKIIGQVATEIHGLYVMTSSPEHPEYDPLRKVIIQLLRGRGPKAVLKK 660
           AAYGVDAPPDELKKIIGQVATEIHGLYVMTSSPEHPEYDPLRKVIIQLLRGRGPKAVLKK
Sbjct: 601 AAYGVDAPPDELKKIIGQVATEIHGLYVMTSSPEHPEYDPLRKVIIQLLRGRGPKAVLKK 660

Query: 661 ADVLEASKRELGRAINSNEYTKVMNEICVSHGSSWVLKSGDGNSR 706
           ADVLEASKRELGRAINSNEYTKVMNEICVSHGSSWVLKSGDGNSR
Sbjct: 661 ADVLEASKRELGRAINSNEYTKVMNEICVSHGSSWVLKSGDGNSR 705

[Close]

BLAST of MS012697 vs. ExPASy TrEMBL
Match: A0A6J1JCH8 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483153 PE=4 SV=1)

HSP 1 Score: 1195.3 bits (3091), Expect = 0.0e+00
Identity = 614/708 (86.72%), Postives = 656/708 (92.66%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKPEPEPPASKPEPEL 60
           MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPK+EVVPKPEPQQPPTK EPE P   PEPE+
Sbjct: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKTEVVPKPEPQQPPTKLEPETPV--PEPEV 60

Query: 61  VEPDAATGEKKEEGEEVEVKPKVESSLPNGVDKMDVETKSEAEEETMV---DDPMEEDVS 120
            EPDA  GEKKEEGEEVEVKPKVE+SLPNGVDKMDVETK E EEETMV   DDPMEED S
Sbjct: 61  AEPDALIGEKKEEGEEVEVKPKVEASLPNGVDKMDVETKLEVEEETMVDDDDDPMEEDAS 120

Query: 121 EDMVVREIDVLFTPSADINSKLYVLQYPLRPCWRPYEFEGRCEEVRVKPSSGEVEVDLNV 180
           EDMVVREIDVLFTPS DIN+KLYVLQYPLRP WRPYEFEGRC+EVRVKP++GEVEVDLNV
Sbjct: 121 EDMVVREIDVLFTPSLDINTKLYVLQYPLRPRWRPYEFEGRCDEVRVKPTTGEVEVDLNV 180

Query: 181 DIESNNYDSKAEGSLQMKKQTLTSSWQPPLATTYAVGLLMGNKLHLNPIHAVVQLRPSIE 240
           DIESNNYDSKA+ +LQMKKQTL SSWQPP+AT+YAVGLLMG+KLHLNP+H VVQLRPS E
Sbjct: 181 DIESNNYDSKADANLQMKKQTLKSSWQPPMATSYAVGLLMGDKLHLNPVHTVVQLRPSFE 240

Query: 241 HLNSGGPKRKNIVRGDPDVKPEESIDVNSAVASRKQKKQTGSSTELKTGDDECWIPLKYY 300
           HLNSGGPKRK  VR DP+VK EE  DVNSA  SRKQKKQTG STE KTGD+ECWIPLKYY
Sbjct: 241 HLNSGGPKRKINVRADPNVKSEEHTDVNSAGGSRKQKKQTGPSTEPKTGDEECWIPLKYY 300

Query: 301 GLESDLSTRYQRSMVAQKSSPIQFSMSPHDYMNSLCPGACTSSIKPRGPSKRYLLSLSLD 360
           GLESDLSTR+ RSMVAQK+SP+QFSMSPHDY++SLCPGA +S  KP+GPSKR+LLSLSL+
Sbjct: 301 GLESDLSTRHLRSMVAQKNSPMQFSMSPHDYVDSLCPGASSSRNKPKGPSKRFLLSLSLE 360

Query: 361 ERIKKLLSEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQLVQGLWVAKSSFLLPQDGGG 420
           ERIKKLL+EGPP+QRFSALKHYAPDYE +EFIEALQQYAQ VQGLWVAKSSFLLPQDG G
Sbjct: 361 ERIKKLLTEGPPIQRFSALKHYAPDYEPDEFIEALQQYAQSVQGLWVAKSSFLLPQDGSG 420

Query: 421 RCARDFVLCLFSKNPLISSSQINVPKSLRDKAKHFLNLFAVERPAFKDWKFREKTDRSFL 480
           RCARDFVL LFSKNP++SSSQINVPKSLRDK KHFLN F VERPAFKDW+F+EKTDR FL
Sbjct: 421 RCARDFVLSLFSKNPVVSSSQINVPKSLRDKVKHFLNWFGVERPAFKDWRFKEKTDRLFL 480

Query: 481 NNYLDIVQKQEKIWRSVEEGITNSFRGSVKSGSHANAATGKPDIVPKTEKQVSFDKATTK 540
           NNY+DIVQKQEK+WRSVEEGITNSFRGSVK+ SHANAA  KP++VPK EKQV  DKA+TK
Sbjct: 481 NNYVDIVQKQEKVWRSVEEGITNSFRGSVKNMSHANAAPVKPEMVPKPEKQVIHDKASTK 540

Query: 541 SSSAPLNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARM 600
           SS+A LNRKSTMSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARM
Sbjct: 541 SSNAALNRKSTMSDETREALPKALQKLFQTHKVCSFQLICQGLRDLAVSQSTLPKADARM 600

Query: 601 AVAAAYGVDAPPDELKKIIGQVATEIHGLYVMTSSPEHPEYDPLRKVIIQLLRGRGPKAV 660
           AVAAAYGVDAPPDELK+II QVATEIHGLYV+TSSPEHPEYDPLRKV+IQLLRGRGPKAV
Sbjct: 601 AVAAAYGVDAPPDELKRIICQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAV 660

Query: 661 LKKADVLEASKRELGRAINSNEYTKVMNEICVSHGSSWVLKSGDGNSR 706
           LKKADVLEASKRELGRAINSNEY+KVMNEICVSHGSSW LKSGDGNSR
Sbjct: 661 LKKADVLEASKRELGRAINSNEYSKVMNEICVSHGSSWALKSGDGNSR 706

[Close]

BLAST of MS012697 vs. ExPASy TrEMBL
Match: A0A6J1EMD6 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435914 PE=4 SV=1)

HSP 1 Score: 1191.0 bits (3080), Expect = 0.0e+00
Identity = 612/707 (86.56%), Postives = 655/707 (92.64%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKPEPEPPASKPEPEL 60
           MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTK EPE P SK  PE+
Sbjct: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKLEPETPVSK--PEV 60

Query: 61  VEPDAATGEKKEEGEEVEVKPKVESSLPNGVDKMDVETKSEAEEETMV--DDPMEEDVSE 120
            EPDA  GEKKEEGEEVEVKPKVE+SLPNGVDKMDVETK E EEETMV  DDPMEED SE
Sbjct: 61  AEPDALIGEKKEEGEEVEVKPKVEASLPNGVDKMDVETKLEVEEETMVEDDDPMEEDASE 120

Query: 121 DMVVREIDVLFTPSADINSKLYVLQYPLRPCWRPYEFEGRCEEVRVKPSSGEVEVDLNVD 180
           DMVVREIDVLFTPS DIN+KLYVLQYPLRP WRPYEFEGRC+EVRVKP++GEVEVDLNVD
Sbjct: 121 DMVVREIDVLFTPSVDINTKLYVLQYPLRPRWRPYEFEGRCDEVRVKPTTGEVEVDLNVD 180

Query: 181 IESNNYDSKAEGSLQMKKQTLTSSWQPPLATTYAVGLLMGNKLHLNPIHAVVQLRPSIEH 240
           IESNNYDSKA+ +LQMKKQTL SSWQPP+AT+YAVGLLMG+KLHLNP+H VVQLRPS EH
Sbjct: 181 IESNNYDSKADANLQMKKQTLKSSWQPPMATSYAVGLLMGDKLHLNPVHTVVQLRPSFEH 240

Query: 241 LNSGGPKRKNIVRGDPDVKPEESIDVNSAVASRKQKKQTGSSTELKTGDDECWIPLKYYG 300
           LNSGGPKRK  VR DP+VK EE  DVNSA  SRKQKKQTG STE KTGD+E WIPLKYYG
Sbjct: 241 LNSGGPKRKINVRADPNVKSEEHTDVNSAGGSRKQKKQTGPSTEPKTGDEESWIPLKYYG 300

Query: 301 LESDLSTRYQRSMVAQKSSPIQFSMSPHDYMNSLCPGACTSSIKPRGPSKRYLLSLSLDE 360
           LESDLSTR+ RSMVA+K+SP+QFSMSPHDY++SLCPGA +S  KP+GPSKR+LLSLSL+E
Sbjct: 301 LESDLSTRHLRSMVAEKNSPMQFSMSPHDYVDSLCPGASSSRNKPKGPSKRFLLSLSLEE 360

Query: 361 RIKKLLSEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQLVQGLWVAKSSFLLPQDGGGR 420
           RIKKLL+EGPP+QRFSALKHYAPDYE +EFIEALQQYAQ VQGLWVAKSSFLLPQDG GR
Sbjct: 361 RIKKLLTEGPPIQRFSALKHYAPDYEPDEFIEALQQYAQSVQGLWVAKSSFLLPQDGSGR 420

Query: 421 CARDFVLCLFSKNPLISSSQINVPKSLRDKAKHFLNLFAVERPAFKDWKFREKTDRSFLN 480
           CARDFVL LFSKNP++SSSQINVPKSLRDK KHFLN F VERPAFKDW+F+EKTDR FLN
Sbjct: 421 CARDFVLSLFSKNPVVSSSQINVPKSLRDKVKHFLNWFGVERPAFKDWRFKEKTDRLFLN 480

Query: 481 NYLDIVQKQEKIWRSVEEGITNSFRGSVKSGSHANAATGKPDIVPKTEKQVSFDKATTKS 540
           NY+DIVQKQEK+WRSVEEGITNSFRGSVK+ SHANAA  KP++VPK EKQV  DKA+TKS
Sbjct: 481 NYVDIVQKQEKVWRSVEEGITNSFRGSVKNMSHANAAPVKPEMVPKPEKQVIHDKASTKS 540

Query: 541 SSAPLNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMA 600
           S+A LNRKSTMSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARMA
Sbjct: 541 SNAALNRKSTMSDETREALPKALQKLFQTHKVCSFQLICQGLRDLAVSQSTLPKADARMA 600

Query: 601 VAAAYGVDAPPDELKKIIGQVATEIHGLYVMTSSPEHPEYDPLRKVIIQLLRGRGPKAVL 660
           VAAAYGVDAPPDELK+II QVATEIHGLYV+TSSPEHPEYDPLRKV+IQLLRGRGPKAVL
Sbjct: 601 VAAAYGVDAPPDELKRIICQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVL 660

Query: 661 KKADVLEASKRELGRAINSNEYTKVMNEICVSHGSSWVLKSGDGNSR 706
           KKADVLEASKRELGRAINSNEY+KVMNEICVSHGS+W LKSGDGNSR
Sbjct: 661 KKADVLEASKRELGRAINSNEYSKVMNEICVSHGSAWALKSGDGNSR 705

[Close]

BLAST of MS012697 vs. ExPASy TrEMBL
Match: A0A1S3BX09 (DNA-directed RNA polymerase III subunit RPC5 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494365 PE=4 SV=1)

HSP 1 Score: 1172.5 bits (3032), Expect = 0.0e+00
Identity = 602/706 (85.27%), Postives = 647/706 (91.64%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKPEPEPPASKPEPEL 60
           MDLD LDE SQVPSRTSRFAPK+SKFKPKPKSEVVPKPEPQQPPTK EP+PP SK  PE+
Sbjct: 1   MDLDGLDERSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPPTKLEPQPPVSK--PEV 60

Query: 61  VEPDAATGEKKEEGEEVEVKPKVESSLPNGVDKMDVETKSEAEEETMV-DDPMEEDVSED 120
           VEPDA  GEKKE+GEEVEVKPKVESSLPNGV KMDVETKSE EE+TMV DDPMEED SED
Sbjct: 61  VEPDAQIGEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDTMVDDDPMEEDASED 120

Query: 121 MVVREIDVLFTPSADINSKLYVLQYPLRPCWRPYEFEGRCEEVRVKPSSGEVEVDLNVDI 180
           MVVREIDVLFTPS D NSKLYVLQYPLRP WRPYEFEGRC+EVRVKPS+GEVE+DLNVDI
Sbjct: 121 MVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEIDLNVDI 180

Query: 181 ESNNYDSKAEGSLQMKKQTLTSSWQPPLATTYAVGLLMGNKLHLNPIHAVVQLRPSIEHL 240
           ESNNYDSKA+ + QMKKQTLTSSWQPPLAT+YAVGLLMGNKLHLNP+HAVVQLRPS EHL
Sbjct: 181 ESNNYDSKADDTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHL 240

Query: 241 NSGGPKRKNIVRGDPDVKPEESIDVNSAVASRKQKKQTGSSTELKTGDDECWIPLKYYGL 300
           NSGGPKRKN +R D DVK EE +DVNSA ASRKQKKQTG STELKT D+ECWIPLKYYGL
Sbjct: 241 NSGGPKRKNNIRADSDVKSEEHVDVNSAGASRKQKKQTGPSTELKTRDEECWIPLKYYGL 300

Query: 301 ESDLSTRYQRSMVAQKSSPIQFSMSPHDYMNSLCPGACTSSIKPRGPSKRYLLSLSLDER 360
           ESDLSTR+ +SMV+Q  SP+QFSMSPHDYM+SLCPG  TSS KP+GPSK+YLLSLSL+ER
Sbjct: 301 ESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSSNKPKGPSKKYLLSLSLEER 360

Query: 361 IKKLLSEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQLVQGLWVAKSSFLLPQDGGGRC 420
           IKKLL+EGPPVQRFSALKHYAPDYEAEEF+EALQQYAQLVQGLWV KS FL+PQDG GRC
Sbjct: 361 IKKLLTEGPPVQRFSALKHYAPDYEAEEFLEALQQYAQLVQGLWVPKSLFLIPQDGSGRC 420

Query: 421 ARDFVLCLFSKNPLISSSQINVPKSLRDKAKHFLNLFAVERPAFKDWKFREKTDRSFLNN 480
           ARDFVL LFSKNP++SSSQINVPKSLRD+ KHFLNLF VERPAFKDWKF+EKTD SFL+N
Sbjct: 421 ARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDHSFLSN 480

Query: 481 YLDIVQKQEKIWRSVEEGITNSFRGSVKSGSHANAATGKPDIVPKTEKQVSFDKATTKSS 540
           ++ IVQKQE+ W ++E+ +   F  S+KSG H  A TGKPD+VPK EKQVS DK TTKSS
Sbjct: 481 HVKIVQKQEEGWNAMEKAL--PFLRSMKSGPHTTATTGKPDVVPKPEKQVSCDKTTTKSS 540

Query: 541 SAPLNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAV 600
           +APLNRK  MSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAV
Sbjct: 541 NAPLNRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAV 600

Query: 601 AAAYGVDAPPDELKKIIGQVATEIHGLYVMTSSPEHPEYDPLRKVIIQLLRGRGPKAVLK 660
           AAAYGVDAPP+ELKKII QVATEIHGLYV+TSSPEHPEYDPLRKV+IQLLRGRGPKAVLK
Sbjct: 601 AAAYGVDAPPEELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLK 660

Query: 661 KADVLEASKRELGRAINSNEYTKVMNEICVSHGSSWVLKSGDGNSR 706
           KADVLEASKRELGRAINSNEY+KVMNEICVSHGSSW LKSGDGNSR
Sbjct: 661 KADVLEASKRELGRAINSNEYSKVMNEICVSHGSSWTLKSGDGNSR 702

[Close]

BLAST of MS012697 vs. ExPASy TrEMBL
Match: A0A0A0KUN5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G038800 PE=4 SV=1)

HSP 1 Score: 1161.4 bits (3003), Expect = 0.0e+00
Identity = 597/706 (84.56%), Postives = 643/706 (91.08%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAPKTSKFKPKPKSEVVPKPEPQQPPTKPEPEPPASKPEPEL 60
           MDLD LDE SQVPSRTSRFAPK+SKFKPKPKSEVVPKPEPQQP TK EP+PP SK  PE+
Sbjct: 1   MDLDGLDEGSQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPLTKLEPQPPISK--PEV 60

Query: 61  VEPDAATGEKKEEGEEVEVKPKVESSLPNGVDKMDVETKSEAEEETMV-DDPMEEDVSED 120
           VEPDA   EKKE+GEEVEVKPKVESSLPNGV KMDVETKSE EE+ MV DDP+EED SED
Sbjct: 61  VEPDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAMVDDDPIEEDASED 120

Query: 121 MVVREIDVLFTPSADINSKLYVLQYPLRPCWRPYEFEGRCEEVRVKPSSGEVEVDLNVDI 180
           MVVREIDVLFTPS D NSKLYVLQYPLRP WRPYEFEGRC+EVRVKPS+GEVEVDLNVDI
Sbjct: 121 MVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDI 180

Query: 181 ESNNYDSKAEGSLQMKKQTLTSSWQPPLATTYAVGLLMGNKLHLNPIHAVVQLRPSIEHL 240
           ESNNYD+KA+G+ QMKKQTLTSSWQPPLAT+YAVGLLMGNKLHLNP+HAVVQLRPS EHL
Sbjct: 181 ESNNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHL 240

Query: 241 NSGGPKRKNIVRGDPDVKPEESIDVNSAVASRKQKKQTGSSTELKTGDDECWIPLKYYGL 300
           NSGGPKRKN VR D DVK EE +DVNSA ASRKQKKQTG STE+KT D+ECWIPLKYYGL
Sbjct: 241 NSGGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDEECWIPLKYYGL 300

Query: 301 ESDLSTRYQRSMVAQKSSPIQFSMSPHDYMNSLCPGACTSSIKPRGPSKRYLLSLSLDER 360
           ESDLSTR+ +SMV+Q  SP+QFSMSPHDYM+SLCPG  TS  KP+GPSK+YLLSLSL+ER
Sbjct: 301 ESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPSKKYLLSLSLEER 360

Query: 361 IKKLLSEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQLVQGLWVAKSSFLLPQDGGGRC 420
           IKKLL+EGPPVQRFSALKHYAPDYE EEFIE LQQYAQLVQGLWV KS FL+PQDG GRC
Sbjct: 361 IKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKSLFLIPQDGSGRC 420

Query: 421 ARDFVLCLFSKNPLISSSQINVPKSLRDKAKHFLNLFAVERPAFKDWKFREKTDRSFLNN 480
           ARDFVL LFSKNP++SSSQINVPKSLRD+ KHFLNLF VERPAFKDWKF+EKTDR FL+N
Sbjct: 421 ARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDRLFLSN 480

Query: 481 YLDIVQKQEKIWRSVEEGITNSFRGSVKSGSHANAATGKPDIVPKTEKQVSFDKATTKSS 540
           ++ I +KQE++W +VE+G T  F  S+KS  HANAATGKP +VPK EKQVS D+ TTKSS
Sbjct: 481 HVRIAEKQEELWNNVEKGFT--FLRSIKSVHHANAATGKPGVVPKLEKQVSSDQTTTKSS 540

Query: 541 SAPLNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAV 600
           +APLNRK  MSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAV
Sbjct: 541 NAPLNRKGAMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAV 600

Query: 601 AAAYGVDAPPDELKKIIGQVATEIHGLYVMTSSPEHPEYDPLRKVIIQLLRGRGPKAVLK 660
           AAAYGVDAPPDELKKII QVATEIHGLYV+TSSPEHPEYDPLRKV+IQLLRGRGPKAVLK
Sbjct: 601 AAAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLK 660

Query: 661 KADVLEASKRELGRAINSNEYTKVMNEICVSHGSSWVLKSGDGNSR 706
           KADVLEASK ELGRAINSNEY+KVMNEIC+SHGSSW LKSGDGNSR
Sbjct: 661 KADVLEASKHELGRAINSNEYSKVMNEICISHGSSWTLKSGDGNSR 702

[Close]

BLAST of MS012697 vs. TAIR 10
Match: AT5G49530.1 (SIN-like family protein )

HSP 1 Score: 523.5 bits (1347), Expect = 2.7e-148
Identity = 314/717 (43.79%), Postives = 431/717 (60.11%), Query Frame = 0


Query: 1   MDLDDLDEPSQVPSRTSRFAP-KTSKFKPKPKSEVVPKPEPQQPPTKPEPEPPASKPEPE 60
           MD DD D+P +V ++T RFAP +  K KPKPK        P+    KP   PP S+ E  
Sbjct: 1   MDFDDDDKPKEV-TKTRRFAPGRAGKSKPKPK--------PEPTADKPVQPPPQSQTE-- 60

Query: 61  LVEPDAATGEKKEEGEEVEVKPKVESSLPNGVDKMDVETKSEAEEETMVDDPMEED---- 120
                 +  + + + +   V  KVE+ + NG  KM++++K + E E M  + MEED    
Sbjct: 61  ------SVSKTEHDVDAKFVGTKVETEVCNGSVKMEIDSKVDKEPEIMETELMEEDQQLP 120

Query: 121 ---------VSEDMVVREIDVLFTPSADINSKLYVLQYPLRPCWRPYEFEGRCEEVRVKP 180
                      +D+VVREIDV F PS D N++LYVLQYPLRP WRPYE + RCEEVRV P
Sbjct: 121 LQEEKEEEEEEDDVVVREIDVFFKPSIDANTQLYVLQYPLRPSWRPYEMDERCEEVRVNP 180

Query: 181 SSGEVEVDLNVDIESNNYDSKAEGSLQMKKQTLTSSWQPPLATTYAVGLLMGNKLHLNPI 240
           S+ +VE+DL++D+ S NYDS     L M KQTL ++W+ P    YAVG+L G+KLHLNP+
Sbjct: 181 STSQVEIDLSMDVHSKNYDSNF--GLNMTKQTLKTTWKQPPTLDYAVGVLSGDKLHLNPV 240

Query: 241 HAVVQLRPSIEHLNSGGPKRKNIVRGDPDVKPEESIDVNSAVASRKQKKQTGSSTELKTG 300
           HAV QLRPS++ L+S           D   K EES + +   + ++ K    +ST+ K  
Sbjct: 241 HAVAQLRPSMQSLSS-----------DKKKKQEESTEESVGTSKKQNKGVQQASTDQKPI 300

Query: 301 DDECWIPLKYYGLESDLSTRYQRSMVAQKSSPIQFSMSPHDYMNSLCPGACTSSIKPRGP 360
           ++E W+ LKY+GL+S+  +RY   M+A  +S I F+MSP  Y+N LC G  + + + +  
Sbjct: 301 NEETWVSLKYHGLQSEYCSRYLNGMMANGNSSIDFNMSPGTYINELCRGGSSRNSESKET 360

Query: 361 SKRYLLSLSLDERIKKLLSEGPPVQRFSALKHYAPDYEAEEFIEALQQYAQLVQGLWVAK 420
            KR LLSL L ER++KLL EG P+ R+S LKHYAP++  E+F+ ALQ+Y +LVQGLW  K
Sbjct: 361 LKRVLLSLPLKERVQKLLCEGSPLIRYSVLKHYAPEFSDEDFLGALQEYGRLVQGLWTPK 420

Query: 421 SSFLLPQDGGGRCARDFVLCLFSKNPLISSSQINVP-KSLRDKAKHFLNLFAVERPAFKD 480
           +  LL  DG    ARD+VL LFS+N  I  S++      ++   +  L  FA ER   KD
Sbjct: 421 TR-LLKLDGPVEAARDYVLSLFSQNTTIKYSEVEATGDKMKPLMERMLTEFAKERHVLKD 480

Query: 481 WKFREKTDRSFLNNYLDIVQKQEKIWRSVEEGITNSFR---GSVKSGSHANAATGKPDIV 540
           WKF+E TD SF+ +Y +IV++Q+  W    E + +      G  ++    N       + 
Sbjct: 481 WKFKEPTDVSFIKSYPEIVKEQDIFWTDKRENLKSRITAQGGKSRADKRRNVVGTSSSVT 540

Query: 541 PKTEKQVSF-DKATTKSSSAPLNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLR 600
            K E   +  DK  +  ++        M +E ++ALPKAL+K+FQ HKVC ++ ICQGLR
Sbjct: 541 VKPEVPTTLSDKGGSSKNTIHRVVTQEMPEELKKALPKALKKVFQTHKVCRYETICQGLR 600

Query: 601 DLAVSQSTLPKADARMAVAAAYGVDAPPDELKKIIGQVATEIHGLYVMTSSPEHPEYDPL 660
           DLAVS S  PKAD+ MAV  A  VDA   EL+ +I  VAT IHG YV  SSP+HPEYD L
Sbjct: 601 DLAVSTSNNPKADSGMAVNVALAVDAYQGELEDVINGVATNIHGSYVSISSPDHPEYDSL 660

Query: 661 RKVIIQLLRGRGPKAVLKKADVLEASKRELGRAINSNEYTKVMNEICVSHGSSWVLK 699
           R+V+I LL G  P   L KA+V  A + +L R I +NEY KVM+EIC ++ S WVL+
Sbjct: 661 REVVISLLTGSPPGTKLMKAEVFAAGRTKLEREITNNEYIKVMHEICETNSSGWVLQ 686

The following BLAST results are available for this feature:

BLAST of MS012697 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136590.1	0.0e+00	99.86	DNA-directed RNA polymerase III subunit RPC5 [Momordica charantia]	[more]
XP_038876785.1	0.0e+00	87.68	DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Benincasa hispida]	[more]
XP_022985072.1	0.0e+00	86.72	DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita maxima] >XP_0...	[more]
XP_022929283.1	0.0e+00	86.56	DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita moschata] >XP...	[more]
XP_023552355.1	0.0e+00	86.42	DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita pepo subsp. p...	[more]

BLAST of MS012697 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9NVU0	9.9e-31	27.00	DNA-directed RNA polymerase III subunit RPC5 OS=Homo sapiens OX=9606 GN=POLR3E P...	[more]
Q9CZT4	8.4e-30	25.87	DNA-directed RNA polymerase III subunit RPC5 OS=Mus musculus OX=10090 GN=Polr3e ...	[more]
O74883	5.7e-10	33.97	DNA-directed RNA polymerase III subunit rpc5 OS=Schizosaccharomyces pombe (strai...	[more]

BLAST of MS012697 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C4C6	0.0e+00	99.86	DNA-directed RNA polymerase III subunit RPC5 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1JCH8	0.0e+00	86.72	DNA-directed RNA polymerase III subunit RPC5 isoform X1 OS=Cucurbita maxima OX=3...	[more]
A0A6J1EMD6	0.0e+00	86.56	DNA-directed RNA polymerase III subunit RPC5 isoform X1 OS=Cucurbita moschata OX...	[more]
A0A1S3BX09	0.0e+00	85.27	DNA-directed RNA polymerase III subunit RPC5 isoform X1 OS=Cucumis melo OX=3656 ...	[more]
A0A0A0KUN5	0.0e+00	84.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G038800 PE=4 SV=1	[more]

BLAST of MS012697 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49530.1	2.7e-148	43.79	SIN-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006886	DNA-directed RNA polymerase III subunit Rpc5	PFAM	PF04801	Sin_N	coord: 118..498 e-value: 1.7E-91 score: 307.6
IPR006886	DNA-directed RNA polymerase III subunit Rpc5	PANTHER	PTHR12069	DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE RNA POLYMERASE III SUBUNIT 5	coord: 109..491
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 505..524
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..284
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 530..551
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 240..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 532..547

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012697.1	MS012697.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus