MS012694 (gene) Bitter gourd (TR) v1

Overview
NameMS012694
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description40S ribosomal protein SA
Locationscaffold63: 2703072 .. 2704398 (+)
RNA-Seq ExpressionMS012694
SyntenyMS012694
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACTGGAACAGCGCAGCGTCAACTCTCGCAGAAGGAGGCTGACATTCAGATGATGTTAGCCGCCGAGGTTCATCTAGGAACCAAAAATTGCAATTTCCAAATGGAACGATACGTTTTCAAGCGCCGGAACGATGGTATGTTGCGGATATACTTCATTCACAGTCGTTCGAATTAGTACAGGACTTCCTATAGATTGATTAGTTCAAATTCGTTATTCCTTTTTCTCTCTGTTATTGGCGGTGGTTTCGCTTGGACTGAAACGTTAAGTGCTATGATTCTCTCTAGACCAGAATGTGATCATAACTTCATCAATAATCATGAATGATTCTTTTTAATTCTCTGTATGTAGGAATATACATTATTAACCTTGGTAAAACATGGGATAAACTTCAGATGGCTGCCAGAGTTATTGTGGCAATTGAGAATCCTCAGGACATTATTGTTCAGTCTGCCAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCACAATACACTGGTGCTCATGCTATAGCTGGGAGGCACACCCCTGGAACGTTCACCAACCAGCTTCAGACCTCATTCAATGAGCCACGTCTTTTGATACTTACTGATCCTAGAACTGACCATCAGGTGGTTAAACATTTTTAAAAGTCGATAATAGTCTGCAGGGTTATAAGTTTATCTTCAAGAGGGCAGTATTCTGTTGCCAGTTATAGATTTAGTCTTGTATGTTCTCTTAGTTTTAGTTATAGCTGACTTCACTTATTGCTGCTATTTATGTTGCTTGGTTGGTTTCTTGCTTTTTGCAGCCCATCAAGGAAGGTGCTCTTGGAAACATTCCTACAATTGCTTTTTGCGACACTGATTCGCCAATGCGGTATGTTGATATTGGGATTCCCGCTAATAACAAAGGGAAACATAGCATAGGATGTCTATTCTGGCTTTTGGCGAGGATGGTTTTGCAGATGCGTGGAACAATCCGTGCTGGGCACAAATGGGATGTGATGGTAACTTCAGAATTTTATTTAATATCTGAACTTGAGAAACCTGAAATTTGAAATGAATAGTTGATTGTTTGAACTTAAAATCAAAGGCTTGGACTGAATGAATGAATGCACGTGTGTGTTGTGTAGGTTGATTTGTTTTTCTATCGGGAGCCTGAGGAGGCTAAGGAGGAAGAAGAAGAGGCTGTTGCACCCCCTGATTATGGTATTGCAGATTTTGGTGCTGCTCCGCTTGCTGTAGATCAATGGGCTCCTGATGCTCAATGGGGTGCCTCTGATGTGGTTCCAGCTGCTGCTGCTGCTCCAGCTTCTAATGTTGAATGGGCCCAAGAGCCA

mRNA sequence

ATGGCGACTGGAACAGCGCAGCGTCAACTCTCGCAGAAGGAGGCTGACATTCAGATGATGTTAGCCGCCGAGGTTCATCTAGGAACCAAAAATTGCAATTTCCAAATGGAACGATACGTTTTCAAGCGCCGGAACGATGGAATATACATTATTAACCTTGGTAAAACATGGGATAAACTTCAGATGGCTGCCAGAGTTATTGTGGCAATTGAGAATCCTCAGGACATTATTGTTCAGTCTGCCAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCACAATACACTGGTGCTCATGCTATAGCTGGGAGGCACACCCCTGGAACGTTCACCAACCAGCTTCAGACCTCATTCAATGAGCCACGTCTTTTGATACTTACTGATCCTAGAACTGACCATCAGCCCATCAAGGAAGGTGCTCTTGGAAACATTCCTACAATTGCTTTTTGCGACACTGATTCGCCAATGCGGTATGTTGATATTGGGATTCCCGCTAATAACAAAGGGAAACATAGCATAGGATGTCTATTCTGGCTTTTGGCGAGGATGGTTTTGCAGATGCGTGGAACAATCCGTGCTGGGCACAAATGGGATGTGATGGTTGATTTGTTTTTCTATCGGGAGCCTGAGGAGGCTAAGGAGGAAGAAGAAGAGGCTGTTGCACCCCCTGATTATGGTATTGCAGATTTTGGTGCTGCTCCGCTTGCTGTAGATCAATGGGCTCCTGATGCTCAATGGGGTGCCTCTGATGTGGTTCCAGCTGCTGCTGCTGCTCCAGCTTCTAATGTTGAATGGGCCCAAGAGCCA

Coding sequence (CDS)

ATGGCGACTGGAACAGCGCAGCGTCAACTCTCGCAGAAGGAGGCTGACATTCAGATGATGTTAGCCGCCGAGGTTCATCTAGGAACCAAAAATTGCAATTTCCAAATGGAACGATACGTTTTCAAGCGCCGGAACGATGGAATATACATTATTAACCTTGGTAAAACATGGGATAAACTTCAGATGGCTGCCAGAGTTATTGTGGCAATTGAGAATCCTCAGGACATTATTGTTCAGTCTGCCAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCACAATACACTGGTGCTCATGCTATAGCTGGGAGGCACACCCCTGGAACGTTCACCAACCAGCTTCAGACCTCATTCAATGAGCCACGTCTTTTGATACTTACTGATCCTAGAACTGACCATCAGCCCATCAAGGAAGGTGCTCTTGGAAACATTCCTACAATTGCTTTTTGCGACACTGATTCGCCAATGCGGTATGTTGATATTGGGATTCCCGCTAATAACAAAGGGAAACATAGCATAGGATGTCTATTCTGGCTTTTGGCGAGGATGGTTTTGCAGATGCGTGGAACAATCCGTGCTGGGCACAAATGGGATGTGATGGTTGATTTGTTTTTCTATCGGGAGCCTGAGGAGGCTAAGGAGGAAGAAGAAGAGGCTGTTGCACCCCCTGATTATGGTATTGCAGATTTTGGTGCTGCTCCGCTTGCTGTAGATCAATGGGCTCCTGATGCTCAATGGGGTGCCTCTGATGTGGTTCCAGCTGCTGCTGCTGCTCCAGCTTCTAATGTTGAATGGGCCCAAGAGCCA

Protein sequence

MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVDQWAPDAQWGASDVVPAAAAAPASNVEWAQEP
Homology
[Close]
BLAST of MS012694 vs. NCBI nr
Match: XP_022136902.1 (40S ribosomal protein SA-like [Momordica charantia] >XP_022136903.1 40S ribosomal protein SA-like [Momordica charantia])

HSP 1 Score: 549.3 bits (1414), Expect = 1.9e-152
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0 

Query: 1   MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL 60
           MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL
Sbjct: 1   MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVDQW 240
           ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVDQW
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVDQW 240

Query: 241 APDAQWGASDVVPAAAAAPASNVEWAQEP 270
           APDAQWGASDVVPAAAAAPASNVEWAQEP
Sbjct: 241 APDAQWGASDVVPAAAAAPASNVEWAQEP 269

[Close]
BLAST of MS012694 vs. NCBI nr
Match: XP_022982113.1 (40S ribosomal protein SA-like [Cucurbita maxima])

HSP 1 Score: 512.3 bits (1318), Expect = 2.5e-141
Identity = 253/272 (93.01%), Postives = 259/272 (95.22%), Query Frame = 0 

Query: 1   MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL 60
           MATGT QRQL+QKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KL
Sbjct: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQ 240
           ARMVLQMRGT+R GHKWDVMVDLFFYREPEEAKE EEE+AVAPPDYGIADFGAAPL  D+
Sbjct: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240

Query: 241 WAPDAQWGASDVVP--AAAAAPASNVEWAQEP 270
           W  DAQW A D+VP  AAAAAP SNVEWA EP
Sbjct: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEP 272

[Close]
BLAST of MS012694 vs. NCBI nr
Match: XP_022942879.1 (40S ribosomal protein SA-like [Cucurbita moschata])

HSP 1 Score: 512.3 bits (1318), Expect = 2.5e-141
Identity = 253/272 (93.01%), Postives = 259/272 (95.22%), Query Frame = 0 

Query: 1   MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL 60
           MATGT QRQL+QKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KL
Sbjct: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQ 240
           ARMVLQMRGT+R GHKWDVMVDLFFYREPEEAKE EEE+AVAPPDYGIADFGAAPL  D+
Sbjct: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240

Query: 241 WAPDAQWGASDVVP--AAAAAPASNVEWAQEP 270
           W  DAQW A D+VP  AAAAAP SNVEWA EP
Sbjct: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEP 272

[Close]
BLAST of MS012694 vs. NCBI nr
Match: XP_008453731.1 (PREDICTED: 40S ribosomal protein SA-like [Cucumis melo] >KAA0044754.1 40S ribosomal protein SA-like [Cucumis melo var. makuwa] >TYK16708.1 40S ribosomal protein SA-like [Cucumis melo var. makuwa])

HSP 1 Score: 512.3 bits (1318), Expect = 2.5e-141
Identity = 251/270 (92.96%), Postives = 258/270 (95.56%), Query Frame = 0 

Query: 1   MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL 60
           MATG  QRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KL
Sbjct: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQ 240
           ARMVLQMRGT+R G+KWDVMVDLFFYREPEE KE EEEEAVAPPDYGIADFG+APLAVDQ
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240

Query: 241 WAPDAQWGASDVVPAAAAAPASNVEWAQEP 270
           W PDAQW AS+V P AAAA  SNVEWAQEP
Sbjct: 241 WVPDAQWDASNVAPTAAAASVSNVEWAQEP 270

[Close]
BLAST of MS012694 vs. NCBI nr
Match: KAG6600605.1 (40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 511.5 bits (1316), Expect = 4.3e-141
Identity = 253/274 (92.34%), Postives = 259/274 (94.53%), Query Frame = 0 

Query: 1   MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL 60
           MATGT QRQL+QKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KL
Sbjct: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQ 240
           ARMVLQMRGT+R GHKWDVMVDLFFYREPEEAKE EEE+AVAPPDYGIADFGAAPL  D+
Sbjct: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240

Query: 241 WAPDAQWGASDVVP----AAAAAPASNVEWAQEP 270
           W  DAQW A D+VP    AAAAAP SNVEWA EP
Sbjct: 241 WVADAQWDAPDMVPAAAAAAAAAPVSNVEWALEP 274

[Close]
BLAST of MS012694 vs. ExPASy Swiss-Prot
Match: O65751 (40S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 5.2e-121
Identity = 225/271 (83.03%), Postives = 236/271 (87.08%), Query Frame = 0 

Query: 1   MATGTA-QRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDK 60
           MAT TA  RQL+QKEADIQMMLAA+VHLGTKNCNFQMERY+FKRRNDGIYIINLGKTWDK
Sbjct: 1   MATTTAPSRQLTQKEADIQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDK 60

Query: 61  LQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120
           L +AAR+IVAIEN QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+
Sbjct: 61  LNLAARIIVAIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 120

Query: 121 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVD- 240
           LARMVLQMRGTIR G KWDVMVDLFFYREPEEAK+ EE+ VA PDY IADF  + +  D 
Sbjct: 181 LARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQPEEDEVAAPDYAIADFNVSAIPSDG 240

Query: 241 QW--APDAQWGASDVVP-AAAAAPASNVEWA 267
           QW  A D  W  +D VP    A PA  V WA
Sbjct: 241 QWPAAIDQPW--NDAVPQPIPAVPA--VNWA 267

[Close]
BLAST of MS012694 vs. ExPASy Swiss-Prot
Match: O22518 (40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 5.2e-121
Identity = 218/265 (82.26%), Postives = 227/265 (85.66%), Query Frame = 0 

Query: 2   ATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQ 61
           A     RQLSQKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+KLQ
Sbjct: 7   AAAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQ 66

Query: 62  MAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEP 121
           +AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+EP
Sbjct: 67  LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEP 126

Query: 122 RLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 181
           RLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA
Sbjct: 127 RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 186

Query: 182 RMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVD-QW 241
           RMVLQMRGTIR G KWDVMVDLFFYREPEEAK++EEE     DY I DF A  +A D QW
Sbjct: 187 RMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEAPAVDYAITDFNAGAIAADGQW 246

Query: 242 APDAQWGASDVVPAAAAAPASNVEW 266
                   SD VP    A    V W
Sbjct: 247 PGTIDQSWSDAVPQPIPA-VPGVNW 270

[Close]
BLAST of MS012694 vs. ExPASy Swiss-Prot
Match: O80377 (40S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 6.7e-121
Identity = 218/263 (82.89%), Postives = 233/263 (88.59%), Query Frame = 0 

Query: 1   MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL 60
           MA+G   R+LS  EADIQMM AAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KL
Sbjct: 1   MASGA--RELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
            +AARVIV+IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+E
Sbjct: 61  MLAARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPL-AVDQ 240
           ARMVLQMRG I  GHKW+VMVDLFFYREPEE K++EEE +   DY +AD+ AAP+   DQ
Sbjct: 181 ARMVLQMRGVISQGHKWEVMVDLFFYREPEETKDQEEEDLPVGDY-VADYAAAPIGGADQ 240

Query: 241 W--APDAQWGASDVVPAAAAAPA 261
           W   PDAQWG   V PA +A PA
Sbjct: 241 WNAIPDAQWGGDVVQPANSAVPA 260

[Close]
BLAST of MS012694 vs. ExPASy Swiss-Prot
Match: A5BUU4 (40S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 5.7e-120
Identity = 227/268 (84.70%), Postives = 234/268 (87.31%), Query Frame = 0 

Query: 1   MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL 60
           MAT T  R LSQKE DIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KL
Sbjct: 1   MATPT--RALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+E
Sbjct: 61  QLAARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEEE-EEAVAPPDYGIADFGAAPL---- 240
           ARMVLQMR TI  GHKWDVMVDLFFYREPEE KE+E +E VA PDYGI D+ A  L    
Sbjct: 181 ARMVLQMRRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYGITDYQATALGGLG 240

Query: 241 AVDQWAP--DA-QWGASDVVPAAAAAPA 261
             D  AP  DA QWGA   VPA A  PA
Sbjct: 241 GGDWGAPITDAPQWGAD--VPAVAPIPA 264

[Close]
BLAST of MS012694 vs. ExPASy Swiss-Prot
Match: Q08682 (40S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3)

HSP 1 Score: 417.5 bits (1072), Expect = 1.1e-115
Identity = 212/274 (77.37%), Postives = 229/274 (83.58%), Query Frame = 0 

Query: 1   MAT--GTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWD 60
           MAT    +  QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTW+
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAP---- 240
           LLARMVLQMRGTI AG KWDVMVDLFFYREPEE K E+E+   P     A++GA P    
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQ----AEYGALPAPEY 240

Query: 241 --LAVDQWA----PDAQWGASDVVPAAAAAPASN 263
             +  DQW     PDA W      P +AA  A++
Sbjct: 241 GMVGGDQWTTAQIPDAAWPGEGQAPISAAPAAAS 270

[Close]
BLAST of MS012694 vs. ExPASy TrEMBL
Match: A0A6J1C6Q9 (40S ribosomal protein SA OS=Momordica charantia OX=3673 GN=LOC111008481 PE=3 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 9.0e-153
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0 

Query: 1   MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL 60
           MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL
Sbjct: 1   MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVDQW 240
           ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVDQW
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAPLAVDQW 240

Query: 241 APDAQWGASDVVPAAAAAPASNVEWAQEP 270
           APDAQWGASDVVPAAAAAPASNVEWAQEP
Sbjct: 241 APDAQWGASDVVPAAAAAPASNVEWAQEP 269

[Close]
BLAST of MS012694 vs. ExPASy TrEMBL
Match: A0A5A7TNP4 (40S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005420 PE=3 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 1.2e-141
Identity = 251/270 (92.96%), Postives = 258/270 (95.56%), Query Frame = 0 

Query: 1   MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL 60
           MATG  QRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KL
Sbjct: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQ 240
           ARMVLQMRGT+R G+KWDVMVDLFFYREPEE KE EEEEAVAPPDYGIADFG+APLAVDQ
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240

Query: 241 WAPDAQWGASDVVPAAAAAPASNVEWAQEP 270
           W PDAQW AS+V P AAAA  SNVEWAQEP
Sbjct: 241 WVPDAQWDASNVAPTAAAASVSNVEWAQEP 270

[Close]
BLAST of MS012694 vs. ExPASy TrEMBL
Match: A0A6J1J410 (40S ribosomal protein SA OS=Cucurbita maxima OX=3661 GN=LOC111481047 PE=3 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 1.2e-141
Identity = 253/272 (93.01%), Postives = 259/272 (95.22%), Query Frame = 0 

Query: 1   MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL 60
           MATGT QRQL+QKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KL
Sbjct: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQ 240
           ARMVLQMRGT+R GHKWDVMVDLFFYREPEEAKE EEE+AVAPPDYGIADFGAAPL  D+
Sbjct: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240

Query: 241 WAPDAQWGASDVVP--AAAAAPASNVEWAQEP 270
           W  DAQW A D+VP  AAAAAP SNVEWA EP
Sbjct: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEP 272

[Close]
BLAST of MS012694 vs. ExPASy TrEMBL
Match: A0A6J1FSL7 (40S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111447777 PE=3 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 1.2e-141
Identity = 253/272 (93.01%), Postives = 259/272 (95.22%), Query Frame = 0 

Query: 1   MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL 60
           MATGT QRQL+QKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KL
Sbjct: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQ 240
           ARMVLQMRGT+R GHKWDVMVDLFFYREPEEAKE EEE+AVAPPDYGIADFGAAPL  D+
Sbjct: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240

Query: 241 WAPDAQWGASDVVP--AAAAAPASNVEWAQEP 270
           W  DAQW A D+VP  AAAAAP SNVEWA EP
Sbjct: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEP 272

[Close]
BLAST of MS012694 vs. ExPASy TrEMBL
Match: A0A1S3BXR8 (40S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103494374 PE=3 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 1.2e-141
Identity = 251/270 (92.96%), Postives = 258/270 (95.56%), Query Frame = 0 

Query: 1   MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL 60
           MATG  QRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KL
Sbjct: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQ 240
           ARMVLQMRGT+R G+KWDVMVDLFFYREPEE KE EEEEAVAPPDYGIADFG+APLAVDQ
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240

Query: 241 WAPDAQWGASDVVPAAAAAPASNVEWAQEP 270
           W PDAQW AS+V P AAAA  SNVEWAQEP
Sbjct: 241 WVPDAQWDASNVAPTAAAASVSNVEWAQEP 270

[Close]
BLAST of MS012694 vs. TAIR 10
Match: AT1G72370.1 (40s ribosomal protein SA )

HSP 1 Score: 417.5 bits (1072), Expect = 7.9e-117
Identity = 212/274 (77.37%), Postives = 229/274 (83.58%), Query Frame = 0 

Query: 1   MAT--GTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWD 60
           MAT    +  QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTW+
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAP---- 240
           LLARMVLQMRGTI AG KWDVMVDLFFYREPEE K E+E+   P     A++GA P    
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQ----AEYGALPAPEY 240

Query: 241 --LAVDQWA----PDAQWGASDVVPAAAAAPASN 263
             +  DQW     PDA W      P +AA  A++
Sbjct: 241 GMVGGDQWTTAQIPDAAWPGEGQAPISAAPAAAS 270

[Close]
BLAST of MS012694 vs. TAIR 10
Match: AT1G72370.2 (40s ribosomal protein SA )

HSP 1 Score: 417.5 bits (1072), Expect = 7.9e-117
Identity = 212/274 (77.37%), Postives = 229/274 (83.58%), Query Frame = 0 

Query: 1   MAT--GTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWD 60
           MAT    +  QLSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTW+
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEEEEEAVAPPDYGIADFGAAP---- 240
           LLARMVLQMRGTI AG KWDVMVDLFFYREPEE K E+E+   P     A++GA P    
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQ----AEYGALPAPEY 240

Query: 241 --LAVDQWA----PDAQWGASDVVPAAAAAPASN 263
             +  DQW     PDA W      P +AA  A++
Sbjct: 241 GMVGGDQWTTAQIPDAAWPGEGQAPISAAPAAAS 270

[Close]
BLAST of MS012694 vs. TAIR 10
Match: AT3G04770.2 (40s ribosomal protein SA B )

HSP 1 Score: 414.5 bits (1064), Expect = 6.7e-116
Identity = 211/264 (79.92%), Postives = 229/264 (86.74%), Query Frame = 0 

Query: 5   TAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAA 64
           TA RQ+S+KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTWDKLQMAA
Sbjct: 8   TAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAA 67

Query: 65  RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLL 124
           RVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGRHTPGTFTNQ+QTSF+EPRLL
Sbjct: 68  RVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLL 127

Query: 125 ILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMV 184
           ILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMV
Sbjct: 128 ILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMV 187

Query: 185 LQMRGTIRAGHKWDVMVDLFFYREPEEAKEE-EEEAVAPPDYGIADFGAAPLAVDQWA-- 244
           LQMRGTI A  KWDVMVDLFFYREPEEAK+E +EEA    DYG+       +  DQW   
Sbjct: 188 LQMRGTILAAQKWDVMVDLFFYREPEEAKQEGDEEAEVQADYGM-------VGGDQWTTA 247

Query: 245 --PDAQWGASDVVPAAAAAPASNV 264
              DA W + +V    +AAPA  V
Sbjct: 248 QISDAAW-SGEVEQPISAAPAVGV 263

[Close]
BLAST of MS012694 vs. TAIR 10
Match: AT3G04770.1 (40s ribosomal protein SA B )

HSP 1 Score: 377.1 bits (967), Expect = 1.2e-104
Identity = 180/198 (90.91%), Postives = 192/198 (96.97%), Query Frame = 0 

Query: 5   TAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKLQMAA 64
           TA RQ+S+KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTWDKLQMAA
Sbjct: 8   TAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAA 67

Query: 65  RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLL 124
           RVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGRHTPGTFTNQ+QTSF+EPRLL
Sbjct: 68  RVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLL 127

Query: 125 ILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMV 184
           ILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMV
Sbjct: 128 ILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMV 187

Query: 185 LQMRGTIRAGHKWDVMVD 203
           LQMRGTI A  KWDVMV+
Sbjct: 188 LQMRGTILAAQKWDVMVN 205

The following BLAST results are available for this feature:
BLAST of MS012694 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022136902.11.9e-152100.0040S ribosomal protein SA-like [Momordica charantia] >XP_022136903.1 40S ribosoma... [more]
XP_022982113.12.5e-14193.0140S ribosomal protein SA-like [Cucurbita maxima][more]
XP_022942879.12.5e-14193.0140S ribosomal protein SA-like [Cucurbita moschata][more]
XP_008453731.12.5e-14192.96PREDICTED: 40S ribosomal protein SA-like [Cucumis melo] >KAA0044754.1 40S riboso... [more]
KAG6600605.14.3e-14192.3440S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of MS012694 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O657515.2e-12183.0340S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1[more]
O225185.2e-12182.2640S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1[more]
O803776.7e-12182.8940S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1[more]
A5BUU45.7e-12084.7040S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV... [more]
Q086821.1e-11577.3740S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3[more]
BLAST of MS012694 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C6Q99.0e-153100.0040S ribosomal protein SA OS=Momordica charantia OX=3673 GN=LOC111008481 PE=3 SV=... [more]
A0A5A7TNP41.2e-14192.9640S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A6J1J4101.2e-14193.0140S ribosomal protein SA OS=Cucurbita maxima OX=3661 GN=LOC111481047 PE=3 SV=1[more]
A0A6J1FSL71.2e-14193.0140S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111447777 PE=3 SV=1[more]
A0A1S3BXR81.2e-14192.9640S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103494374 PE=3 SV=1[more]
BLAST of MS012694 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G72370.17.9e-11777.3740s ribosomal protein SA [more]
AT1G72370.27.9e-11777.3740s ribosomal protein SA [more]
AT3G04770.26.7e-11679.9240s ribosomal protein SA B [more]
AT3G04770.11.2e-10490.9140s ribosomal protein SA B [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001865Ribosomal protein S2PRINTSPR00395RIBOSOMALS2coord: 17..35
score: 35.79
coord: 121..138
score: 44.62
coord: 138..149
score: 46.03
coord: 47..56
score: 64.92
coord: 96..113
score: 47.01
coord: 159..173
score: 53.64
IPR001865Ribosomal protein S2PFAMPF00318Ribosomal_S2coord: 119..184
e-value: 4.8E-11
score: 42.3
coord: 20..113
e-value: 5.9E-14
score: 51.8
IPR001865Ribosomal protein S2CDDcd01425RPS2coord: 20..186
e-value: 4.27251E-71
score: 215.138
NoneNo IPR availableGENE3D3.40.50.10490coord: 16..221
e-value: 1.7E-103
score: 346.3
NoneNo IPR availablePANTHERPTHR11489:SF2540S RIBOSOMAL PROTEIN SAcoord: 8..260
IPR005707Ribosomal protein S2, eukaryotic/archaealTIGRFAMTIGR01012TIGR01012coord: 12..208
e-value: 2.1E-96
score: 319.1
IPR005707Ribosomal protein S2, eukaryotic/archaealPANTHERPTHR1148940S RIBOSOMAL PROTEIN SAcoord: 8..260
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00962RIBOSOMAL_S2_1coord: 17..28
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00963RIBOSOMAL_S2_2coord: 121..145
IPR027498Ribosomal protein S2, eukaryoticHAMAPMF_03015Ribosomal_S2_eukcoord: 4..268
score: 50.482666
IPR023591Ribosomal protein S2, flavodoxin-like domain superfamilySUPERFAMILY52313Ribosomal protein S2coord: 12..202

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS012694.1MS012694.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome