MS012659 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAGATGTTAGTACGGAAGCGCCCACGGCCGCAGATGAAGAGAACGGCGAGTATGTCAGGAATCAAGGTGGATGTCAGCCACGTGGAAGGTGGACAGCCGTCTGATCACCATCACAGTCCCGGAAGCTGGCAAAATCCTCCGGCGATCGCCGCCGACGCTGATCCGATGAACTACTCCTTATCCTTCGTGTCGCCGAGAGGCCGGAGAAATCTCTCCGCCTTCAACGACGGCGGCGACGATTCCGTTCACTTTCTACGCACTTGCACCTTCTGTCACCGCCGTCTCTCACCCGCCCGTGACATTTACATGTACATG AAGATGTTAGTACGGAAGCGCCCACGGCCGCAGATGAAGAGAACGGCGAGTATGTCAGGAATCAAGGTGGATGTCAGCCACGTGGAAGGTGGACAGCCGTCTGATCACCATCACAGTCCCGGAAGCTGGCAAAATCCTCCGGCGATCGCCGCCGACGCTGATCCGATGAACTACTCCTTATCCTTCGTGTCGCCGAGAGGCCGGAGAAATCTCTCCGCCTTCAACGACGGCGGCGACGATTCCGTTCACTTTCTACGCACTTGCACCTTCTGTCACCGCCGTCTCTCACCCGCCCGTGACATTTACATGTACATG AAGATGTTAGTACGGAAGCGCCCACGGCCGCAGATGAAGAGAACGGCGAGTATGTCAGGAATCAAGGTGGATGTCAGCCACGTGGAAGGTGGACAGCCGTCTGATCACCATCACAGTCCCGGAAGCTGGCAAAATCCTCCGGCGATCGCCGCCGACGCTGATCCGATGAACTACTCCTTATCCTTCGTGTCGCCGAGAGGCCGGAGAAATCTCTCCGCCTTCAACGACGGCGGCGACGATTCCGTTCACTTTCTACGCACTTGCACCTTCTGTCACCGCCGTCTCTCACCCGCCCGTGACATTTACATGTACATG KMLVRKRPRPQMKRTASMSGIKVDVSHVEGGQPSDHHHSPGSWQNPPAIAADADPMNYSLSFVSPRGRRNLSAFNDGGDDSVHFLRTCTFCHRRLSPARDIYMYM Homology
BLAST of MS012659 vs. NCBI nr
Match: XP_022136874.1 (uncharacterized protein LOC111008457 [Momordica charantia]) HSP 1 Score: 216.1 bits (549), Expect = 1.5e-52 Identity = 102/104 (98.08%), Postives = 103/104 (99.04%), Query Frame = 0
BLAST of MS012659 vs. NCBI nr
Match: XP_023552992.1 (uncharacterized protein LOC111810518 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 158.7 bits (400), Expect = 2.8e-35 Identity = 82/109 (75.23%), Postives = 91/109 (83.49%), Query Frame = 0
BLAST of MS012659 vs. NCBI nr
Match: XP_022929436.1 (uncharacterized protein LOC111436011 [Cucurbita moschata]) HSP 1 Score: 157.9 bits (398), Expect = 4.7e-35 Identity = 81/109 (74.31%), Postives = 91/109 (83.49%), Query Frame = 0
BLAST of MS012659 vs. NCBI nr
Match: KAG6577279.1 (FCS-Like Zinc finger 6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 156.8 bits (395), Expect = 1.1e-34 Identity = 81/109 (74.31%), Postives = 91/109 (83.49%), Query Frame = 0
BLAST of MS012659 vs. NCBI nr
Match: KAG7015362.1 (hypothetical protein SDJN02_22997, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 156.8 bits (395), Expect = 1.1e-34 Identity = 81/109 (74.31%), Postives = 91/109 (83.49%), Query Frame = 0
BLAST of MS012659 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 5.5e-10 Identity = 47/114 (41.23%), Postives = 59/114 (51.75%), Query Frame = 0
BLAST of MS012659 vs. ExPASy Swiss-Prot
Match: F4JW68 (FCS-Like Zinc finger 7 OS=Arabidopsis thaliana OX=3702 GN=FLZ7 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 5.1e-08 Identity = 38/104 (36.54%), Postives = 51/104 (49.04%), Query Frame = 0
BLAST of MS012659 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 8.7e-08 Identity = 39/103 (37.86%), Postives = 51/103 (49.51%), Query Frame = 0
BLAST of MS012659 vs. ExPASy TrEMBL
Match: A0A6J1C5J8 (uncharacterized protein LOC111008457 OS=Momordica charantia OX=3673 GN=LOC111008457 PE=3 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 7.1e-53 Identity = 102/104 (98.08%), Postives = 103/104 (99.04%), Query Frame = 0
BLAST of MS012659 vs. ExPASy TrEMBL
Match: A0A6J1EN49 (uncharacterized protein LOC111436011 OS=Cucurbita moschata OX=3662 GN=LOC111436011 PE=3 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 2.3e-35 Identity = 81/109 (74.31%), Postives = 91/109 (83.49%), Query Frame = 0
BLAST of MS012659 vs. ExPASy TrEMBL
Match: A0A6J1J657 (uncharacterized protein LOC111482935 OS=Cucurbita maxima OX=3661 GN=LOC111482935 PE=3 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.1e-33 Identity = 78/109 (71.56%), Postives = 89/109 (81.65%), Query Frame = 0
BLAST of MS012659 vs. ExPASy TrEMBL
Match: A0A5D3D0I1 (DUF581 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005730 PE=3 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 1.0e-27 Identity = 72/112 (64.29%), Postives = 83/112 (74.11%), Query Frame = 0
BLAST of MS012659 vs. ExPASy TrEMBL
Match: A0A1S3BYA3 (uncharacterized protein LOC103494409 OS=Cucumis melo OX=3656 GN=LOC103494409 PE=3 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 1.0e-27 Identity = 72/112 (64.29%), Postives = 83/112 (74.11%), Query Frame = 0
BLAST of MS012659 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 65.1 bits (157), Expect = 3.9e-11 Identity = 47/114 (41.23%), Postives = 59/114 (51.75%), Query Frame = 0
BLAST of MS012659 vs. TAIR 10
Match: AT4G39795.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 58.5 bits (140), Expect = 3.6e-09 Identity = 38/104 (36.54%), Postives = 51/104 (49.04%), Query Frame = 0
BLAST of MS012659 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 57.8 bits (138), Expect = 6.2e-09 Identity = 39/103 (37.86%), Postives = 51/103 (49.51%), Query Frame = 0
BLAST of MS012659 vs. TAIR 10
Match: AT5G65040.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 42.0 bits (97), Expect = 3.5e-04 Identity = 37/107 (34.58%), Postives = 47/107 (43.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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