MS012636 (gene) Bitter gourd (TR) v1

Overview


Name	MS012636
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Myb transcription factor
Location	scaffold63: 2234629 .. 2235401 (-)
RNA-Seq Expression	MS012636
Synteny	MS012636

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGATCTCCTTCTTATTCTTCTTCCTGTGATGGAATTGGGGTGAAACGAGGCGCTTGGACTCCGCAAGAAGATCACAAACTTGTTGCCTTTATTACTCAACATGGCCATCGTAGCTGGCGAGCCCTCCCCAAGCTCGCTGGTAATCCAATCTCTGCCTTTCACTTTACTGCACTTTAGTTGTTCCCGAGTATCTTTGTGTTAGTACGATATTACTTCTTTTTTTATTTCACTCAAAAGGGTCTCGTACCAATTAAGATAGTTGTCTTCTCCTATATATCATAGATATATCACTTCCTTTCTAAGCTAACGTGAAACTTTATGTTTGCATTCTTTGTAACCCCAACAAAGTAGTTTCTTGGACAAAAAAATTTTTGAGTTTCTTTCTCTTAGTTTTCAAATTTTTTTTTGTTTAGGGCTTAATCGATGTGGGAAGAGTTGCAGACTGCGATGGACAAACTACCTTCGGCCAGGCATAAAGAGAGGAAAATTCTCTCAAGAAGAGCAACAAACCATCCTCAATCTCCATTCAATCCTTGGAAACAAGTAATATATATATAACATCATTCATTTCTCTCTTTATCAACCTTTTTTTATGTCTATGTATACAATTTTTTTTTATCATGTGTTCTTCCTGTTGAAGATGGTCCGTGATTGCAAGCCATCTTCCCGGACGAACGGATAACGAAATAAAGAATTTATGGAACACCCATCTGAAGAAGAAGCTCATTCAAATGGGGTTTGATCCCATCACTCACATGCCCACCACT

mRNA sequence

ATGGGAAGATCTCCTTCTTATTCTTCTTCCTGTGATGGAATTGGGGTGAAACGAGGCGCTTGGACTCCGCAAGAAGATCACAAACTTGTTGCCTTTATTACTCAACATGGCCATCGTAGCTGGCGAGCCCTCCCCAAGCTCGCTGGGCTTAATCGATGTGGGAAGAGTTGCAGACTGCGATGGACAAACTACCTTCGGCCAGGCATAAAGAGAGGAAAATTCTCTCAAGAAGAGCAACAAACCATCCTCAATCTCCATTCAATCCTTGGAAACAAATGGTCCGTGATTGCAAGCCATCTTCCCGGACGAACGGATAACGAAATAAAGAATTTATGGAACACCCATCTGAAGAAGAAGCTCATTCAAATGGGGTTTGATCCCATCACTCACATGCCCACCACT

Coding sequence (CDS)

ATGGGAAGATCTCCTTCTTATTCTTCTTCCTGTGATGGAATTGGGGTGAAACGAGGCGCTTGGACTCCGCAAGAAGATCACAAACTTGTTGCCTTTATTACTCAACATGGCCATCGTAGCTGGCGAGCCCTCCCCAAGCTCGCTGGGCTTAATCGATGTGGGAAGAGTTGCAGACTGCGATGGACAAACTACCTTCGGCCAGGCATAAAGAGAGGAAAATTCTCTCAAGAAGAGCAACAAACCATCCTCAATCTCCATTCAATCCTTGGAAACAAATGGTCCGTGATTGCAAGCCATCTTCCCGGACGAACGGATAACGAAATAAAGAATTTATGGAACACCCATCTGAAGAAGAAGCTCATTCAAATGGGGTTTGATCCCATCACTCACATGCCCACCACT

Protein sequence

MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLRWTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKLIQMGFDPITHMPTT

Homology

[Close]

BLAST of MS012636 vs. NCBI nr
Match: XP_028776582.1 (transcription factor MYB53 [Prosopis alba])

HSP 1 Score: 242.7 bits (618), Expect = 1.9e-60
Identity = 111/134 (82.84%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLR 60
           MGRSP     CD IG+K+G WTP+ED KLV FI +HGHRSWRALPKLAGLNRCGKSCRLR
Sbjct: 1   MGRSP----CCDEIGLKKGPWTPEEDQKLVNFIQEHGHRSWRALPKLAGLNRCGKSCRLR 60

Query: 61  WTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKL 120
           WTNYLRP IKRGKFSQEEQQTILNLH+ILGNKWS IAS LPGRTDNEIKN WNTHLKKKL
Sbjct: 61  WTNYLRPDIKRGKFSQEEQQTILNLHAILGNKWSAIASQLPGRTDNEIKNFWNTHLKKKL 120

Query: 121 IQMGFDPITHMPTT 135
           IQMG+DP+TH P T
Sbjct: 121 IQMGYDPMTHQPRT 130

[Close]

BLAST of MS012636 vs. NCBI nr
Match: XP_028056542.1 (transcription factor MYB93-like [Camellia sinensis] >THG20106.1 hypothetical protein TEA_007189 [Camellia sinensis var. sinensis])

HSP 1 Score: 241.5 bits (615), Expect = 4.2e-60
Identity = 110/134 (82.09%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLR 60
           MGRSP     CD  G+K+G WTP+EDHKLV +I +HGH SWRALPKLAGLNRCGKSCRLR
Sbjct: 1   MGRSP----CCDERGLKKGPWTPEEDHKLVKYIHKHGHGSWRALPKLAGLNRCGKSCRLR 60

Query: 61  WTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKL 120
           WTNYLRP IKRGKFSQEE+QTILNLHSILGNKWS IA+HLPGRTDNEIKN WNTHLKKKL
Sbjct: 61  WTNYLRPDIKRGKFSQEEEQTILNLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKL 120

Query: 121 IQMGFDPITHMPTT 135
           IQMGFDP+TH P T
Sbjct: 121 IQMGFDPMTHRPRT 130

[Close]

BLAST of MS012636 vs. NCBI nr
Match: KAF5961907.1 (hypothetical protein HYC85_003116 [Camellia sinensis])

HSP 1 Score: 241.5 bits (615), Expect = 4.2e-60
Identity = 110/134 (82.09%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLR 60
           MGRSP     CD  G+K+G WTP+EDHKLV +I +HGH SWRALPKLAGLNRCGKSCRLR
Sbjct: 1   MGRSP----CCDERGLKKGPWTPEEDHKLVKYIHKHGHGSWRALPKLAGLNRCGKSCRLR 60

Query: 61  WTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKL 120
           WTNYLRP IKRGKFSQEE+QTILNLHSILGNKWS IA+HLPGRTDNEIKN WNTHLKKKL
Sbjct: 61  WTNYLRPDIKRGKFSQEEEQTILNLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKL 120

Query: 121 IQMGFDPITHMPTT 135
           IQMGFDP+TH P T
Sbjct: 121 IQMGFDPMTHRPRT 130

[Close]

BLAST of MS012636 vs. NCBI nr
Match: XP_028069886.1 (transcription factor MYB93-like [Camellia sinensis] >THG14500.1 hypothetical protein TEA_014207 [Camellia sinensis var. sinensis])

HSP 1 Score: 241.5 bits (615), Expect = 4.2e-60
Identity = 110/134 (82.09%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLR 60
           MGRSP     CD  G+K+G WTP+EDHKLV +I +HGH SWRALPKLAGLNRCGKSCRLR
Sbjct: 1   MGRSP----CCDERGLKKGPWTPEEDHKLVKYIHKHGHGSWRALPKLAGLNRCGKSCRLR 60

Query: 61  WTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKL 120
           WTNYLRP IKRGKFSQEE+QTILNLHSILGNKWS IA+HLPGRTDNEIKN WNTHLKKKL
Sbjct: 61  WTNYLRPDIKRGKFSQEEEQTILNLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKL 120

Query: 121 IQMGFDPITHMPTT 135
           IQMGFDP+TH P T
Sbjct: 121 IQMGFDPMTHRPRT 130

[Close]

BLAST of MS012636 vs. NCBI nr
Match: XP_021685650.1 (transcription factor MYB16-like [Hevea brasiliensis])

HSP 1 Score: 241.1 bits (614), Expect = 5.4e-60
Identity = 109/134 (81.34%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLR 60
           MGRSP     CD  G+K+G WTP+ED KLV +I +HGHRSWRALP+LAGLNRCGKSCRLR
Sbjct: 1   MGRSP----CCDENGLKKGPWTPEEDQKLVDYIQKHGHRSWRALPRLAGLNRCGKSCRLR 60

Query: 61  WTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKL 120
           WTNYLRP IKRGKFSQEE+QTILNLHS+LGNKWS IASHLPGRTDNEIKN WNTHLKKKL
Sbjct: 61  WTNYLRPDIKRGKFSQEEEQTILNLHSVLGNKWSAIASHLPGRTDNEIKNFWNTHLKKKL 120

Query: 121 IQMGFDPITHMPTT 135
           IQMGFDP+TH P T
Sbjct: 121 IQMGFDPMTHQPRT 130

[Close]

BLAST of MS012636 vs. ExPASy Swiss-Prot
Match: Q9FJP2 (Transcription factor MYB53 OS=Arabidopsis thaliana OX=3702 GN=MYB53 PE=1 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 3.7e-59
Identity = 103/134 (76.87%), Postives = 115/134 (85.82%), Query Frame = 0


Query: 1   MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLR 60
           MGRSP    S D  G+K+G W P+ED KL+ +I +HGH SW ALPKLAGLNRCGKSCRLR
Sbjct: 1   MGRSP----SSDETGLKKGPWLPEEDDKLINYIHKHGHSSWSALPKLAGLNRCGKSCRLR 60

Query: 61  WTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKL 120
           WTNYLRP IKRGKFS EE++TILNLH++LGNKWS+IASHLPGRTDNEIKN WNTHLKKKL
Sbjct: 61  WTNYLRPDIKRGKFSAEEEETILNLHAVLGNKWSMIASHLPGRTDNEIKNFWNTHLKKKL 120

Query: 121 IQMGFDPITHMPTT 135
           IQMGFDP+TH P T
Sbjct: 121 IQMGFDPMTHQPRT 130

[Close]

BLAST of MS012636 vs. ExPASy Swiss-Prot
Match: Q9S9Z2 (Transcription factor MYB93 OS=Arabidopsis thaliana OX=3702 GN=MYB93 PE=1 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.8e-58
Identity = 103/134 (76.87%), Postives = 113/134 (84.33%), Query Frame = 0


Query: 1   MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLR 60
           MGRSP     CD  G+K+G WTP+ED KL+ +I +HGH SWRALPKLA LNRCGKSCRLR
Sbjct: 1   MGRSP----CCDENGLKKGPWTPEEDQKLIDYIHKHGHGSWRALPKLADLNRCGKSCRLR 60

Query: 61  WTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKL 120
           WTNYLRP IKRGKFS EE+QTIL+LHSILGNKWS IA+HL GRTDNEIKN WNTHLKKKL
Sbjct: 61  WTNYLRPDIKRGKFSAEEEQTILHLHSILGNKWSAIATHLQGRTDNEIKNFWNTHLKKKL 120

Query: 121 IQMGFDPITHMPTT 135
           IQMG DP+TH P T
Sbjct: 121 IQMGIDPVTHQPRT 130

[Close]

BLAST of MS012636 vs. ExPASy Swiss-Prot
Match: Q9SBF3 (Transcription factor MYB92 OS=Arabidopsis thaliana OX=3702 GN=MYB92 PE=1 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.4e-58
Identity = 102/134 (76.12%), Postives = 113/134 (84.33%), Query Frame = 0


Query: 1   MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLR 60
           MGRSP      D  G+K+G WTP ED KLV ++ +HGH SWRALPKLAGLNRCGKSCRLR
Sbjct: 1   MGRSP----ISDDSGLKKGPWTPDEDEKLVNYVQKHGHSSWRALPKLAGLNRCGKSCRLR 60

Query: 61  WTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKL 120
           WTNYLRP IKRG+FS +E+QTILNLHS+LGNKWS IA+ LPGRTDNEIKN WNTHLKKKL
Sbjct: 61  WTNYLRPDIKRGRFSPDEEQTILNLHSVLGNKWSTIANQLPGRTDNEIKNFWNTHLKKKL 120

Query: 121 IQMGFDPITHMPTT 135
           IQMGFDP+TH P T
Sbjct: 121 IQMGFDPMTHRPRT 130

[Close]

BLAST of MS012636 vs. ExPASy Swiss-Prot
Match: Q9LXF1 (Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 9.3e-55
Identity = 91/132 (68.94%), Postives = 113/132 (85.61%), Query Frame = 0


Query: 1   MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLR 60
           MGRSP     CD +G+K+G WTP+ED KL+A+I +HGH SWR+LP+ AGL+RCGKSCRLR
Sbjct: 1   MGRSP----CCDKLGLKKGPWTPEEDQKLLAYIEEHGHGSWRSLPEKAGLHRCGKSCRLR 60

Query: 61  WTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKL 120
           WTNYLRP IKRGKF+ +E+QTI+ LH++LGN+WS IA+HLP RTDNEIKN WNTHLKK+L
Sbjct: 61  WTNYLRPDIKRGKFNLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRL 120

Query: 121 IQMGFDPITHMP 133
           ++MG DP+TH P
Sbjct: 121 VKMGIDPVTHKP 128

[Close]

BLAST of MS012636 vs. ExPASy Swiss-Prot
Match: Q9LE63 (Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.0e-53
Identity = 91/130 (70.00%), Postives = 110/130 (84.62%), Query Frame = 0


Query: 1   MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLR 60
           MGRSP     CD  G+K+G WTP+ED KL+A+I +HGH SWR+LP+ AGL RCGKSCRLR
Sbjct: 1   MGRSP----CCDKAGLKKGPWTPEEDQKLLAYIEEHGHGSWRSLPEKAGLQRCGKSCRLR 60

Query: 61  WTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKL 120
           WTNYLRP IKRGKF+ +E+QTI+ LH++LGN+WS IA+HLP RTDNEIKN WNTHLKK+L
Sbjct: 61  WTNYLRPDIKRGKFTVQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRL 120

Query: 121 IQMGFDPITH 131
           I+MG DP+TH
Sbjct: 121 IKMGIDPVTH 126

[Close]

BLAST of MS012636 vs. ExPASy TrEMBL
Match: A0A7J7IBE5 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_003116 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.0e-60
Identity = 110/134 (82.09%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLR 60
           MGRSP     CD  G+K+G WTP+EDHKLV +I +HGH SWRALPKLAGLNRCGKSCRLR
Sbjct: 1   MGRSP----CCDERGLKKGPWTPEEDHKLVKYIHKHGHGSWRALPKLAGLNRCGKSCRLR 60

Query: 61  WTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKL 120
           WTNYLRP IKRGKFSQEE+QTILNLHSILGNKWS IA+HLPGRTDNEIKN WNTHLKKKL
Sbjct: 61  WTNYLRPDIKRGKFSQEEEQTILNLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKL 120

Query: 121 IQMGFDPITHMPTT 135
           IQMGFDP+TH P T
Sbjct: 121 IQMGFDPMTHRPRT 130

[Close]

BLAST of MS012636 vs. ExPASy TrEMBL
Match: A0A4S4EUY9 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_007189 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.0e-60
Identity = 110/134 (82.09%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLR 60
           MGRSP     CD  G+K+G WTP+EDHKLV +I +HGH SWRALPKLAGLNRCGKSCRLR
Sbjct: 1   MGRSP----CCDERGLKKGPWTPEEDHKLVKYIHKHGHGSWRALPKLAGLNRCGKSCRLR 60

Query: 61  WTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKL 120
           WTNYLRP IKRGKFSQEE+QTILNLHSILGNKWS IA+HLPGRTDNEIKN WNTHLKKKL
Sbjct: 61  WTNYLRPDIKRGKFSQEEEQTILNLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKL 120

Query: 121 IQMGFDPITHMPTT 135
           IQMGFDP+TH P T
Sbjct: 121 IQMGFDPMTHRPRT 130

[Close]

BLAST of MS012636 vs. ExPASy TrEMBL
Match: A0A4S4EDS7 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_014207 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.0e-60
Identity = 110/134 (82.09%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLR 60
           MGRSP     CD  G+K+G WTP+EDHKLV +I +HGH SWRALPKLAGLNRCGKSCRLR
Sbjct: 1   MGRSP----CCDERGLKKGPWTPEEDHKLVKYIHKHGHGSWRALPKLAGLNRCGKSCRLR 60

Query: 61  WTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKL 120
           WTNYLRP IKRGKFSQEE+QTILNLHSILGNKWS IA+HLPGRTDNEIKN WNTHLKKKL
Sbjct: 61  WTNYLRPDIKRGKFSQEEEQTILNLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKL 120

Query: 121 IQMGFDPITHMPTT 135
           IQMGFDP+TH P T
Sbjct: 121 IQMGFDPMTHRPRT 130

[Close]

BLAST of MS012636 vs. ExPASy TrEMBL
Match: A0A6A6LHW6 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_002487 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.6e-60
Identity = 109/134 (81.34%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLR 60
           MGRSP     CD  G+K+G WTP+ED KLV +I +HGHRSWRALP+LAGLNRCGKSCRLR
Sbjct: 1   MGRSP----CCDENGLKKGPWTPEEDQKLVDYIQKHGHRSWRALPRLAGLNRCGKSCRLR 60

Query: 61  WTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKL 120
           WTNYLRP IKRGKFSQEE+QTILNLHS+LGNKWS IASHLPGRTDNEIKN WNTHLKKKL
Sbjct: 61  WTNYLRPDIKRGKFSQEEEQTILNLHSVLGNKWSAIASHLPGRTDNEIKNFWNTHLKKKL 120

Query: 121 IQMGFDPITHMPTT 135
           IQMGFDP+TH P T
Sbjct: 121 IQMGFDPMTHQPRT 130

[Close]

BLAST of MS012636 vs. ExPASy TrEMBL
Match: A0A067LQI0 (MYB family protein OS=Jatropha curcas OX=180498 GN=JCGZ_24028 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.5e-60
Identity = 109/134 (81.34%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 1   MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLR 60
           MGRSP     CD  G+K+G WTP+ED KLV FI QHGH SWRALPKLAGLNRCGKSCRLR
Sbjct: 1   MGRSP----CCDESGLKKGPWTPEEDQKLVKFIQQHGHGSWRALPKLAGLNRCGKSCRLR 60

Query: 61  WTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKL 120
           WTNYLRP IKRGKFSQ+E+QTILNLHS+LGNKWS IASHLPGRTDNEIKN WNTHLKKKL
Sbjct: 61  WTNYLRPDIKRGKFSQDEEQTILNLHSVLGNKWSAIASHLPGRTDNEIKNFWNTHLKKKL 120

Query: 121 IQMGFDPITHMPTT 135
           IQMG+DP+TH P T
Sbjct: 121 IQMGYDPMTHRPRT 130

[Close]

BLAST of MS012636 vs. TAIR 10
Match: AT5G65230.1 (myb domain protein 53 )

HSP 1 Score: 228.8 bits (582), Expect = 2.6e-60
Identity = 103/134 (76.87%), Postives = 115/134 (85.82%), Query Frame = 0


Query: 1   MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLR 60
           MGRSP    S D  G+K+G W P+ED KL+ +I +HGH SW ALPKLAGLNRCGKSCRLR
Sbjct: 1   MGRSP----SSDETGLKKGPWLPEEDDKLINYIHKHGHSSWSALPKLAGLNRCGKSCRLR 60

Query: 61  WTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKL 120
           WTNYLRP IKRGKFS EE++TILNLH++LGNKWS+IASHLPGRTDNEIKN WNTHLKKKL
Sbjct: 61  WTNYLRPDIKRGKFSAEEEETILNLHAVLGNKWSMIASHLPGRTDNEIKNFWNTHLKKKL 120

Query: 121 IQMGFDPITHMPTT 135
           IQMGFDP+TH P T
Sbjct: 121 IQMGFDPMTHQPRT 130

[Close]

BLAST of MS012636 vs. TAIR 10
Match: AT1G34670.1 (myb domain protein 93 )

HSP 1 Score: 226.5 bits (576), Expect = 1.3e-59
Identity = 103/134 (76.87%), Postives = 113/134 (84.33%), Query Frame = 0


Query: 1   MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLR 60
           MGRSP     CD  G+K+G WTP+ED KL+ +I +HGH SWRALPKLA LNRCGKSCRLR
Sbjct: 1   MGRSP----CCDENGLKKGPWTPEEDQKLIDYIHKHGHGSWRALPKLADLNRCGKSCRLR 60

Query: 61  WTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKL 120
           WTNYLRP IKRGKFS EE+QTIL+LHSILGNKWS IA+HL GRTDNEIKN WNTHLKKKL
Sbjct: 61  WTNYLRPDIKRGKFSAEEEQTILHLHSILGNKWSAIATHLQGRTDNEIKNFWNTHLKKKL 120

Query: 121 IQMGFDPITHMPTT 135
           IQMG DP+TH P T
Sbjct: 121 IQMGIDPVTHQPRT 130

[Close]

BLAST of MS012636 vs. TAIR 10
Match: AT5G10280.1 (myb domain protein 92 )

HSP 1 Score: 226.1 bits (575), Expect = 1.7e-59
Identity = 102/134 (76.12%), Postives = 113/134 (84.33%), Query Frame = 0


Query: 1   MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLR 60
           MGRSP      D  G+K+G WTP ED KLV ++ +HGH SWRALPKLAGLNRCGKSCRLR
Sbjct: 1   MGRSP----ISDDSGLKKGPWTPDEDEKLVNYVQKHGHSSWRALPKLAGLNRCGKSCRLR 60

Query: 61  WTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKL 120
           WTNYLRP IKRG+FS +E+QTILNLHS+LGNKWS IA+ LPGRTDNEIKN WNTHLKKKL
Sbjct: 61  WTNYLRPDIKRGRFSPDEEQTILNLHSVLGNKWSTIANQLPGRTDNEIKNFWNTHLKKKL 120

Query: 121 IQMGFDPITHMPTT 135
           IQMGFDP+TH P T
Sbjct: 121 IQMGFDPMTHRPRT 130

[Close]

BLAST of MS012636 vs. TAIR 10
Match: AT3G02940.1 (myb domain protein 107 )

HSP 1 Score: 222.6 bits (566), Expect = 1.9e-58
Identity = 99/134 (73.88%), Postives = 111/134 (82.84%), Query Frame = 0


Query: 1   MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLR 60
           MGRSP     CD  G+K+G WTP+ED KL+  I +HGH SWRALPK AGLNRCGKSCRLR
Sbjct: 1   MGRSP----CCDESGLKKGPWTPEEDQKLINHIRKHGHGSWRALPKQAGLNRCGKSCRLR 60

Query: 61  WTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKL 120
           WTNYLRP IKRG F+ EE+QTI+NLHS+LGNKWS IA HLPGRTDNEIKN WNTH++KKL
Sbjct: 61  WTNYLRPDIKRGNFTAEEEQTIINLHSLLGNKWSSIAGHLPGRTDNEIKNYWNTHIRKKL 120

Query: 121 IQMGFDPITHMPTT 135
           IQMG DP+TH P T
Sbjct: 121 IQMGIDPVTHRPRT 130

[Close]

BLAST of MS012636 vs. TAIR 10
Match: AT5G16770.1 (myb domain protein 9 )

HSP 1 Score: 217.2 bits (552), Expect = 7.8e-57
Identity = 97/134 (72.39%), Postives = 111/134 (82.84%), Query Frame = 0


Query: 1   MGRSPSYSSSCDGIGVKRGAWTPQEDHKLVAFITQHGHRSWRALPKLAGLNRCGKSCRLR 60
           MGRSP     CD  G+K+G WT +ED KL+  I +HGH SWRALPK AGLNRCGKSCRLR
Sbjct: 1   MGRSP----CCDENGLKKGPWTQEEDDKLIDHIQKHGHGSWRALPKQAGLNRCGKSCRLR 60

Query: 61  WTNYLRPGIKRGKFSQEEQQTILNLHSILGNKWSVIASHLPGRTDNEIKNLWNTHLKKKL 120
           WTNYLRP IKRG F++EE+QTI+NLHS+LGNKWS IA +LPGRTDNEIKN WNTHL+KKL
Sbjct: 61  WTNYLRPDIKRGNFTEEEEQTIINLHSLLGNKWSSIAGNLPGRTDNEIKNYWNTHLRKKL 120

Query: 121 IQMGFDPITHMPTT 135
           +QMG DP+TH P T
Sbjct: 121 LQMGIDPVTHRPRT 130

The following BLAST results are available for this feature:

BLAST of MS012636 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_028776582.1	1.9e-60	82.84	transcription factor MYB53 [Prosopis alba]	[more]
XP_028056542.1	4.2e-60	82.09	transcription factor MYB93-like [Camellia sinensis] >THG20106.1 hypothetical pro...	[more]
KAF5961907.1	4.2e-60	82.09	hypothetical protein HYC85_003116 [Camellia sinensis]	[more]
XP_028069886.1	4.2e-60	82.09	transcription factor MYB93-like [Camellia sinensis] >THG14500.1 hypothetical pro...	[more]
XP_021685650.1	5.4e-60	81.34	transcription factor MYB16-like [Hevea brasiliensis]	[more]

BLAST of MS012636 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJP2	3.7e-59	76.87	Transcription factor MYB53 OS=Arabidopsis thaliana OX=3702 GN=MYB53 PE=1 SV=1	[more]
Q9S9Z2	1.8e-58	76.87	Transcription factor MYB93 OS=Arabidopsis thaliana OX=3702 GN=MYB93 PE=1 SV=1	[more]
Q9SBF3	2.4e-58	76.12	Transcription factor MYB92 OS=Arabidopsis thaliana OX=3702 GN=MYB92 PE=1 SV=1	[more]
Q9LXF1	9.3e-55	68.94	Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1	[more]
Q9LE63	1.0e-53	70.00	Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1	[more]

BLAST of MS012636 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J7IBE5	2.0e-60	82.09	Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_003116 PE=4 SV=1	[more]
A0A4S4EUY9	2.0e-60	82.09	Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0071...	[more]
A0A4S4EDS7	2.0e-60	82.09	Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0142...	[more]
A0A6A6LHW6	2.6e-60	81.34	Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_002487 PE=4 SV=1	[more]
A0A067LQI0	4.5e-60	81.34	MYB family protein OS=Jatropha curcas OX=180498 GN=JCGZ_24028 PE=4 SV=1	[more]

BLAST of MS012636 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65230.1	2.6e-60	76.87	myb domain protein 53	[more]
AT1G34670.1	1.3e-59	76.87	myb domain protein 93	[more]
AT5G10280.1	1.7e-59	76.12	myb domain protein 92	[more]
AT3G02940.1	1.9e-58	73.88	myb domain protein 107	[more]
AT5G16770.1	7.8e-57	72.39	myb domain protein 9	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 70..118 e-value: 5.0E-14 score: 62.6 coord: 17..67 e-value: 4.8E-12 score: 56.0
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 66..116 score: 10.336444
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 13..65 score: 10.928677
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 73..116 e-value: 7.42403E-11 score: 51.8074
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 20..65 e-value: 1.41707E-9 score: 48.3406
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 18..65 e-value: 3.8E-15 score: 55.8 coord: 71..116 e-value: 3.9E-14 score: 52.6
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 13..65 score: 18.187794
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 66..120 score: 24.451271
None	No IPR available	GENE3D	1.10.10.60		coord: 18..70 e-value: 6.7E-19 score: 69.6
None	No IPR available	GENE3D	1.10.10.60		coord: 73..120 e-value: 3.4E-21 score: 76.9
None	No IPR available	PANTHER	PTHR10641:SF1296	TRANSCRIPTION FACTOR MYB53	coord: 1..132
None	No IPR available	PANTHER	PTHR10641	MYB FAMILY TRANSCRIPTION FACTOR	coord: 1..132
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 15..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012636.1	MS012636.1	mRNA