Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATGGTTTCTTTAGAAGCTTTGGCCATGGCGGGGATGGATTCTGATTTGTGGGCTATGGATGCTGAAGAATGGGAAAGAAATGAGACCGAGAATCATGTCATTCCGCCGCATTTGTTATTAGCGGACGAGGACGAAGACGAAGGAGACATGACGAGTACGACGGGTAACTGTAAGTTTCCGGCCGTTGGATTATTCGGCAGCGGGCGGAGGAAAGATGACGGTGCTGGTGGTGTGTACTGCTTTCCGGCGATTATGTGCCAATATTTCAGAAAAAGCATAGAGAAGAGAGCGTGGAATTTTCTGAGGTCAATGGGAACAATGGTCGGAGCTATTGTAGGGTTTCTTATGGTGATGACTACGAAGATAATAACTTCACAAGGATCCAAGTCC
mRNA sequence
AAAATGGTTTCTTTAGAAGCTTTGGCCATGGCGGGGATGGATTCTGATTTGTGGGCTATGGATGCTGAAGAATGGGAAAGAAATGAGACCGAGAATCATGTCATTCCGCCGCATTTGTTATTAGCGGACGAGGACGAAGACGAAGGAGACATGACGAGTACGACGGGTAACTGTAAGTTTCCGGCCGTTGGATTATTCGGCAGCGGGCGGAGGAAAGATGACGGTGCTGGTGGTGTGTACTGCTTTCCGGCGATTATGTGCCAATATTTCAGAAAAAGCATAGAGAAGAGAGCGTGGAATTTTCTGAGGTCAATGGGAACAATGGTCGGAGCTATTGTAGGGTTTCTTATGGTGATGACTACGAAGATAATAACTTCACAAGGATCCAAGTCC
Coding sequence (CDS)
AAAATGGTTTCTTTAGAAGCTTTGGCCATGGCGGGGATGGATTCTGATTTGTGGGCTATGGATGCTGAAGAATGGGAAAGAAATGAGACCGAGAATCATGTCATTCCGCCGCATTTGTTATTAGCGGACGAGGACGAAGACGAAGGAGACATGACGAGTACGACGGGTAACTGTAAGTTTCCGGCCGTTGGATTATTCGGCAGCGGGCGGAGGAAAGATGACGGTGCTGGTGGTGTGTACTGCTTTCCGGCGATTATGTGCCAATATTTCAGAAAAAGCATAGAGAAGAGAGCGTGGAATTTTCTGAGGTCAATGGGAACAATGGTCGGAGCTATTGTAGGGTTTCTTATGGTGATGACTACGAAGATAATAACTTCACAAGGATCCAAGTCC
Protein sequence
KMVSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLLADEDEDEGDMTSTTGNCKFPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAWNFLRSMGTMVGAIVGFLMVMTTKIITSQGSKS
Homology
BLAST of MS012635 vs. NCBI nr
Match:
KAG6577295.1 (hypothetical protein SDJN03_24869, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 131.0 bits (328), Expect = 7.7e-27
Identity = 72/127 (56.69%), Postives = 90/127 (70.87%), Query Frame = 0
Query: 3 VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLLADEDEDEGDMTSTTGNCKFPA 62
VSLEALAMAG+ S+ WAMDAEEWERNE EN V PPH LLADED+D+ ++TST N FP
Sbjct: 3 VSLEALAMAGITSNEWAMDAEEWERNEIENDV-PPH-LLADEDDDDDNVTSTVSNYSFPV 62
Query: 63 VGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAWNFLRSMGTMVGAIVGFLMVMTTK 122
G F S RR+D GA ++CF I+C KS+EKRA N + S+ +V I+GFL+V K
Sbjct: 63 AGFFDSLRREDGGAHDIHCFWGILCS-LSKSLEKRASNGMSSVRIIVRTILGFLLVKILK 122
Query: 123 IITSQGS 130
II++ S
Sbjct: 123 IISAHTS 126
BLAST of MS012635 vs. NCBI nr
Match:
KAG7015383.1 (hypothetical protein SDJN02_23018, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 129.4 bits (324), Expect = 2.2e-26
Identity = 71/127 (55.91%), Postives = 89/127 (70.08%), Query Frame = 0
Query: 3 VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLLADEDEDEGDMTSTTGNCKFPA 62
VSLEALAMAG+ S+ WAMDAEEWERNE EN V PPH LLADED+D+ ++TST N FP
Sbjct: 3 VSLEALAMAGITSNEWAMDAEEWERNEIENDV-PPH-LLADEDDDDDNVTSTVSNYSFPV 62
Query: 63 VGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAWNFLRSMGTMVGAIVGFLMVMTTK 122
G F S R+D GA ++CF I+C KS+EKRA N + S+ +V I+GFL+V K
Sbjct: 63 AGFFDSLHREDGGADDIHCFWGILCS-LSKSLEKRASNGMSSVRIIVRTILGFLLVKILK 122
Query: 123 IITSQGS 130
II++ S
Sbjct: 123 IISAHTS 126
BLAST of MS012635 vs. NCBI nr
Match:
XP_022943015.1 (uncharacterized protein LOC111447880 [Cucurbita moschata])
HSP 1 Score: 127.1 bits (318), Expect = 1.1e-25
Identity = 78/129 (60.47%), Postives = 89/129 (68.99%), Query Frame = 0
Query: 3 VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLLADEDEDEGDMTSTTGNCKFPA 62
VSLEALAMAG+DS+ WAMDAEEWERNE E IPPH LLADED++E +M++ KFPA
Sbjct: 3 VSLEALAMAGIDSNEWAMDAEEWERNEMEKD-IPPH-LLADEDDEEDEMST-----KFPA 62
Query: 63 VGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAWNFLRSMGTMVGAIVGFLMVMTTK 122
S RKDDG GGV C P IM + RK EKR N L SM + A+VGFLM MT K
Sbjct: 63 TRC--SCCRKDDGVGGVSCSPTIM-WHLRKITEKRDLNCLSSMEIVTSAVVGFLMFMTIK 121
Query: 123 IITSQGSKS 132
II S+ SKS
Sbjct: 123 IIASKRSKS 121
BLAST of MS012635 vs. NCBI nr
Match:
KAG6600647.1 (hypothetical protein SDJN03_05880, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 120.2 bits (300), Expect = 1.4e-23
Identity = 76/129 (58.91%), Postives = 88/129 (68.22%), Query Frame = 0
Query: 3 VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLLADEDEDEGDMTSTTGNCKFPA 62
VSLEALAMAG+DS+ AMDAEEWERNE E + IPPH LLADED +E +M++ KFPA
Sbjct: 3 VSLEALAMAGIDSNERAMDAEEWERNEMEKN-IPPH-LLADEDNEEDEMST-----KFPA 62
Query: 63 VGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAWNFLRSMGTMVGAIVGFLMVMTTK 122
S RKD+G GGV C P IM + RK EKR N L SM + A+VGFLM MT K
Sbjct: 63 TRC--SCCRKDEGVGGVSCSPTIM-WHLRKITEKRDLNCLSSMEIVTSAVVGFLMFMTIK 121
Query: 123 IITSQGSKS 132
II S+ SKS
Sbjct: 123 IIASKRSKS 121
BLAST of MS012635 vs. NCBI nr
Match:
TYK16880.1 (Tetratricopeptide-like helical [Cucumis melo var. makuwa])
HSP 1 Score: 115.2 bits (287), Expect = 4.4e-22
Identity = 68/129 (52.71%), Postives = 86/129 (66.67%), Query Frame = 0
Query: 3 VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLLADEDEDEGD-MTSTTGNCKFP 62
VSLEALAMAG+DS+ W MDA+EWERNE + V+PPHLL +ED+++G+ +TST N F
Sbjct: 3 VSLEALAMAGIDSNEWGMDAQEWERNEID--VVPPHLLADEEDDEDGEYVTSTISNYCFR 62
Query: 63 AVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAWNFLRSMGTMVGAIVGFLMVMTT 122
G FG RR+D A G I K IEKRA N + S+ +V I+GFLMVMT
Sbjct: 63 VDGSFGGWRRRDWKADGALRILGIFYS-LSKVIEKRASNGMNSVRIIVRTILGFLMVMTM 122
Query: 123 KIITSQGSK 131
KII++Q SK
Sbjct: 123 KIISAQRSK 128
BLAST of MS012635 vs. ExPASy TrEMBL
Match:
A0A6J1FX98 (uncharacterized protein LOC111447880 OS=Cucurbita moschata OX=3662 GN=LOC111447880 PE=4 SV=1)
HSP 1 Score: 127.1 bits (318), Expect = 5.4e-26
Identity = 78/129 (60.47%), Postives = 89/129 (68.99%), Query Frame = 0
Query: 3 VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLLADEDEDEGDMTSTTGNCKFPA 62
VSLEALAMAG+DS+ WAMDAEEWERNE E IPPH LLADED++E +M++ KFPA
Sbjct: 3 VSLEALAMAGIDSNEWAMDAEEWERNEMEKD-IPPH-LLADEDDEEDEMST-----KFPA 62
Query: 63 VGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAWNFLRSMGTMVGAIVGFLMVMTTK 122
S RKDDG GGV C P IM + RK EKR N L SM + A+VGFLM MT K
Sbjct: 63 TRC--SCCRKDDGVGGVSCSPTIM-WHLRKITEKRDLNCLSSMEIVTSAVVGFLMFMTIK 121
Query: 123 IITSQGSKS 132
II S+ SKS
Sbjct: 123 IIASKRSKS 121
BLAST of MS012635 vs. ExPASy TrEMBL
Match:
A0A0A0KWE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026810 PE=4 SV=1)
HSP 1 Score: 115.5 bits (288), Expect = 1.6e-22
Identity = 72/134 (53.73%), Postives = 88/134 (65.67%), Query Frame = 0
Query: 3 VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLLADEDEDEGD---MTSTTGNCK 62
VSLEALAMAG+DS+ WAMDAEEWERNE + V+PPHLL +ED+++GD TST N
Sbjct: 3 VSLEALAMAGIDSNEWAMDAEEWERNEID--VVPPHLLADEEDDEDGDEHVTTSTISNYC 62
Query: 63 FPAVGLFGSGRRKD---DGAGGVYCFPAIMCQYFRKSIEKRAWNFLRSMGTMVGAIVGFL 122
FP G F R +D DG G + I C K IEKRA N + S+ +V I+GFL
Sbjct: 63 FPVDGSFEGWRGRDCKADGGHG-HGILGIFCS-LSKVIEKRASNGMSSVRIIVRTILGFL 122
Query: 123 MVMTTKIITSQGSK 131
MVMT KII++Q SK
Sbjct: 123 MVMTMKIISAQRSK 132
BLAST of MS012635 vs. ExPASy TrEMBL
Match:
A0A5D3CZU0 (Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00110 PE=4 SV=1)
HSP 1 Score: 115.2 bits (287), Expect = 2.1e-22
Identity = 68/129 (52.71%), Postives = 86/129 (66.67%), Query Frame = 0
Query: 3 VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLLADEDEDEGD-MTSTTGNCKFP 62
VSLEALAMAG+DS+ W MDA+EWERNE + V+PPHLL +ED+++G+ +TST N F
Sbjct: 3 VSLEALAMAGIDSNEWGMDAQEWERNEID--VVPPHLLADEEDDEDGEYVTSTISNYCFR 62
Query: 63 AVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAWNFLRSMGTMVGAIVGFLMVMTT 122
G FG RR+D A G I K IEKRA N + S+ +V I+GFLMVMT
Sbjct: 63 VDGSFGGWRRRDWKADGALRILGIFYS-LSKVIEKRASNGMNSVRIIVRTILGFLMVMTM 122
Query: 123 KIITSQGSK 131
KII++Q SK
Sbjct: 123 KIISAQRSK 128
BLAST of MS012635 vs. ExPASy TrEMBL
Match:
A0A5A7TS68 (Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004640 PE=4 SV=1)
HSP 1 Score: 106.7 bits (265), Expect = 7.6e-20
Identity = 62/121 (51.24%), Postives = 80/121 (66.12%), Query Frame = 0
Query: 3 VSLEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLLADEDEDEGD-MTSTTGNCKFP 62
VSLEALAMAG+DS+ W MDA+EWERNE + V+PPHLL +ED+++G+ +TST N F
Sbjct: 3 VSLEALAMAGIDSNEWGMDAQEWERNEID--VVPPHLLADEEDDEDGEYVTSTISNYCFR 62
Query: 63 AVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRAWNFLRSMGTMVGAIVGFLMVMTT 122
G FG RR+D A G + I K IEKRA N + S+ +V I+GFLMVMT
Sbjct: 63 VDGSFGGWRRRDWKADGAHRILGIFYS-LSKVIEKRASNGMNSVRIIVRTILGFLMVMTN 120
BLAST of MS012635 vs. ExPASy TrEMBL
Match:
A0A0A0KU90 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026820 PE=4 SV=1)
HSP 1 Score: 73.6 bits (179), Expect = 7.1e-10
Identity = 51/99 (51.52%), Postives = 59/99 (59.60%), Query Frame = 0
Query: 3 VSLEALAMAGMDSDLWAMDAEEWERN--ETEN-HVIPPHLLLADEDEDEGDMTSTTGNCK 62
VSLEALAMAG+DS+ WAMDAEEW+ N + EN +IPPH LLADEDE+
Sbjct: 3 VSLEALAMAGIDSNEWAMDAEEWKTNTHQMENDDIIPPH-LLADEDEE-----------N 62
Query: 63 FPAVGLFGSGRRKDDGAGGVYCFPAIMCQYFRKSIEKRA 99
A L SG RKDDG V+C RK +EKRA
Sbjct: 63 IAAKELCISGHRKDDGL-VVFCAFRRSYAILRKMMEKRA 88
BLAST of MS012635 vs. TAIR 10
Match:
AT2G22320.1 (unknown protein; Has 7 Blast hits to 7 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 43.5 bits (101), Expect = 1.5e-04
Identity = 22/44 (50.00%), Postives = 28/44 (63.64%), Query Frame = 0
Query: 5 LEALAMAGMDSDLWAMDAEEWERNETENHVIPPHLLLADEDEDE 49
+EALAMAG+D W + EEWE E+ V+P HLL D E+E
Sbjct: 1 MEALAMAGVDYQEWGLSIEEWELQES---VVPLHLLADDFKEEE 41
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6577295.1 | 7.7e-27 | 56.69 | hypothetical protein SDJN03_24869, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7015383.1 | 2.2e-26 | 55.91 | hypothetical protein SDJN02_23018, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022943015.1 | 1.1e-25 | 60.47 | uncharacterized protein LOC111447880 [Cucurbita moschata] | [more] |
KAG6600647.1 | 1.4e-23 | 58.91 | hypothetical protein SDJN03_05880, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
TYK16880.1 | 4.4e-22 | 52.71 | Tetratricopeptide-like helical [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1FX98 | 5.4e-26 | 60.47 | uncharacterized protein LOC111447880 OS=Cucurbita moschata OX=3662 GN=LOC1114478... | [more] |
A0A0A0KWE7 | 1.6e-22 | 53.73 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026810 PE=4 SV=1 | [more] |
A0A5D3CZU0 | 2.1e-22 | 52.71 | Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
A0A5A7TS68 | 7.6e-20 | 51.24 | Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... | [more] |
A0A0A0KU90 | 7.1e-10 | 51.52 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026820 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT2G22320.1 | 1.5e-04 | 50.00 | unknown protein; Has 7 Blast hits to 7 proteins in 4 species: Archae - 0; Bacter... | [more] |