MS012632 (gene) Bitter gourd (TR) v1

Overview
NameMS012632
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEGF-like domain-containing protein
Locationscaffold63: 2193036 .. 2193833 (-)
RNA-Seq ExpressionMS012632
SyntenyMS012632
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGCGCTTTCTCATTTTTACCTTTCACGTTATCGTATGCACCTCCATCTCAAGCCACCGTTCCGTCGCCGCCAGTCCTCCATGCCGGAGCACATGCGGTTCGCTCATCGTAAAGTACCCGTTCGGCACCGGCTACGGCTGCGGTTCGCCGAGATTCTCCTCACACGTGACCTGCTCGTCCGACGACCGCCTCCTCCTCACCACTCACACCGGCGATTATCCGATCACTTCCATTTCATACTCCGCCTCCACCGTCATAATCTCCCCGCCGTTAATGTCCACCTGCTCTCTGATGCACGAATCGCAAACCCTAGGCATCGATTGGACCGGCCCATTCCAACTCGGCTCATCGGCGTTCCTCCTCCTCGATTGCGAATCTTCCTCCGCCTCCCTCACGATTCGAGGCTCCGCCGTGTGCGATTTGTCCTTCTCTCACCTCTGCGCTTCGATCTACTCCTGTCCGGCCGTCGTCAAGCTCGGATTGCCGCTCTTCCCGCCGACGAACAGCTGCTGTGTGTACTCGCCGGCGAACTTCAACGGCAAGGGCGAGCTCGAACTGCGCGAGCTCAAGTGCGGCGGATACTCGTCGGTGGTGTCGCTGGGCCAGTATCAGACGGATCCGACGCGGTGGGAGTACGGAGTGGAATTGAAGTACGGATATGGCGCGTTGGAGAACAGTGTGGTGGAAAATAAATGCAACGGCTGCGAAATGAGCGGCGGCGCGTGTGGATTTACTCCGCCGGATAACTCGTTCGTGTGCGTCTGCGGTGAAAAAGGATTCAACACCACGACGGACTGC

mRNA sequence

TTGCGCTTTCTCATTTTTACCTTTCACGTTATCGTATGCACCTCCATCTCAAGCCACCGTTCCGTCGCCGCCAGTCCTCCATGCCGGAGCACATGCGGTTCGCTCATCGTAAAGTACCCGTTCGGCACCGGCTACGGCTGCGGTTCGCCGAGATTCTCCTCACACGTGACCTGCTCGTCCGACGACCGCCTCCTCCTCACCACTCACACCGGCGATTATCCGATCACTTCCATTTCATACTCCGCCTCCACCGTCATAATCTCCCCGCCGTTAATGTCCACCTGCTCTCTGATGCACGAATCGCAAACCCTAGGCATCGATTGGACCGGCCCATTCCAACTCGGCTCATCGGCGTTCCTCCTCCTCGATTGCGAATCTTCCTCCGCCTCCCTCACGATTCGAGGCTCCGCCGTGTGCGATTTGTCCTTCTCTCACCTCTGCGCTTCGATCTACTCCTGTCCGGCCGTCGTCAAGCTCGGATTGCCGCTCTTCCCGCCGACGAACAGCTGCTGTGTGTACTCGCCGGCGAACTTCAACGGCAAGGGCGAGCTCGAACTGCGCGAGCTCAAGTGCGGCGGATACTCGTCGGTGGTGTCGCTGGGCCAGTATCAGACGGATCCGACGCGGTGGGAGTACGGAGTGGAATTGAAGTACGGATATGGCGCGTTGGAGAACAGTGTGGTGGAAAATAAATGCAACGGCTGCGAAATGAGCGGCGGCGCGTGTGGATTTACTCCGCCGGATAACTCGTTCGTGTGCGTCTGCGGTGAAAAAGGATTCAACACCACGACGGACTGC

Coding sequence (CDS)

TTGCGCTTTCTCATTTTTACCTTTCACGTTATCGTATGCACCTCCATCTCAAGCCACCGTTCCGTCGCCGCCAGTCCTCCATGCCGGAGCACATGCGGTTCGCTCATCGTAAAGTACCCGTTCGGCACCGGCTACGGCTGCGGTTCGCCGAGATTCTCCTCACACGTGACCTGCTCGTCCGACGACCGCCTCCTCCTCACCACTCACACCGGCGATTATCCGATCACTTCCATTTCATACTCCGCCTCCACCGTCATAATCTCCCCGCCGTTAATGTCCACCTGCTCTCTGATGCACGAATCGCAAACCCTAGGCATCGATTGGACCGGCCCATTCCAACTCGGCTCATCGGCGTTCCTCCTCCTCGATTGCGAATCTTCCTCCGCCTCCCTCACGATTCGAGGCTCCGCCGTGTGCGATTTGTCCTTCTCTCACCTCTGCGCTTCGATCTACTCCTGTCCGGCCGTCGTCAAGCTCGGATTGCCGCTCTTCCCGCCGACGAACAGCTGCTGTGTGTACTCGCCGGCGAACTTCAACGGCAAGGGCGAGCTCGAACTGCGCGAGCTCAAGTGCGGCGGATACTCGTCGGTGGTGTCGCTGGGCCAGTATCAGACGGATCCGACGCGGTGGGAGTACGGAGTGGAATTGAAGTACGGATATGGCGCGTTGGAGAACAGTGTGGTGGAAAATAAATGCAACGGCTGCGAAATGAGCGGCGGCGCGTGTGGATTTACTCCGCCGGATAACTCGTTCGTGTGCGTCTGCGGTGAAAAAGGATTCAACACCACGACGGACTGC

Protein sequence

LRFLIFTFHVIVCTSISSHRSVAASPPCRSTCGSLIVKYPFGTGYGCGSPRFSSHVTCSSDDRLLLTTHTGDYPITSISYSASTVIISPPLMSTCSLMHESQTLGIDWTGPFQLGSSAFLLLDCESSSASLTIRGSAVCDLSFSHLCASIYSCPAVVKLGLPLFPPTNSCCVYSPANFNGKGELELRELKCGGYSSVVSLGQYQTDPTRWEYGVELKYGYGALENSVVENKCNGCEMSGGACGFTPPDNSFVCVCGEKGFNTTTDC
Homology
BLAST of MS012632 vs. NCBI nr
Match: XP_038903465.1 (uncharacterized protein LOC120090047 [Benincasa hispida])

HSP 1 Score: 468.4 bits (1204), Expect = 4.1e-128
Identity = 219/264 (82.95%), Postives = 243/264 (92.05%), Query Frame = 0

Query: 4   LIFTFHVIVCTSISSHRSVAASPPCRSTCGSLIVKYPFGTGYGCGSPRFSSHVTCSSDDR 63
           LIFTFH++   SIS+HRS A SPPCR+TCG+L +KYPFGTGYGCGSPRFSS VTCSSDDR
Sbjct: 22  LIFTFHILTSISISAHRSAAVSPPCRTTCGTLSIKYPFGTGYGCGSPRFSSQVTCSSDDR 81

Query: 64  LLLTTHTGDYPITSISYSASTVIISPPLMSTCSLMHE-SQTLGIDWTGPFQLGSSAFLLL 123
            LL THTG+YPITSISYS STV+ISPP MSTCS MHE SQTLGIDWTGPFQLGSSAFLLL
Sbjct: 82  FLLNTHTGNYPITSISYSDSTVVISPPSMSTCSKMHESSQTLGIDWTGPFQLGSSAFLLL 141

Query: 124 DCESSSASLTIRGSAVCDLSFSHLCASIYSCPAVVKLGLPLFPPTNSCCVYSPANFNGKG 183
           DC+S S SL+IRGS VCDLS++HLCASIYSCP+VV LGLPLFPPTNSCCVYSPANF+GKG
Sbjct: 142 DCKSPSVSLSIRGSGVCDLSYAHLCASIYSCPSVVDLGLPLFPPTNSCCVYSPANFDGKG 201

Query: 184 ELELRELKCGGYSSVVSLGQYQTDPTRWEYGVELKYGYGALENSVVENKCNGCEMSGGAC 243
           EL+LRELKCGG+SS+VSLG+Y+T+P RWEYGVELKYGYGALENSV+E+KC GCEMSGGAC
Sbjct: 202 ELDLRELKCGGFSSIVSLGEYETNPMRWEYGVELKYGYGALENSVMESKCKGCEMSGGAC 261

Query: 244 GFTPPDNSFVCVCGEKGFNTTTDC 267
           GFTPP+N FVCVC E+GFNTTTDC
Sbjct: 262 GFTPPENLFVCVC-ERGFNTTTDC 284

BLAST of MS012632 vs. NCBI nr
Match: XP_041005755.1 (uncharacterized protein LOC121250645 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 359.0 bits (920), Expect = 3.5e-95
Identity = 164/262 (62.60%), Postives = 208/262 (79.39%), Query Frame = 0

Query: 8   FHVI-VCTSISSHRSVAASPPCRSTCGSLIVKYPFGTGYGCGSPRFSSHVTCSSD-DRLL 67
           FH++ V    ++  ++A  P C+ TCGS+ VKYPFGTG GCGSPRF  +VTC SD D+L+
Sbjct: 10  FHLLPVMILFTAQLTLAPDPVCKGTCGSVQVKYPFGTGTGCGSPRFQPYVTCKSDEDQLV 69

Query: 68  LTTHTGDYPITSISYSASTVIISPPLMSTCSLMHE-SQTLGIDWTGPFQLGSSAFLLLDC 127
            TTHTG YPITSISY+ ST+IISP  MSTC  M + S +LG+DW  PFQLG S F+L+ C
Sbjct: 70  FTTHTGSYPITSISYTTSTLIISPSDMSTCISMRQCSSSLGVDWASPFQLGPSTFILISC 129

Query: 128 ESSSASLTIRGSAVCDLSFSHLCASIYSCPAVVKLGLPLFPPTNSCCVYSPANFNGKGEL 187
              ++SLT++G+ +CD S+SHLCAS+Y+CPAVV LGLPLFPPTNSCCVYSPAN NGKGEL
Sbjct: 130 TPPTSSLTLKGTPICDPSYSHLCASLYTCPAVVSLGLPLFPPTNSCCVYSPANLNGKGEL 189

Query: 188 ELRELKCGGYSSVVSLGQYQTDPTRWEYGVELKYGYGALENSVVENKCNGCEMSGGACGF 247
           +LR+LKC GY+SV+SLG Y TDP++W+YGV LKY  G L+N++++ KCN CEMSGG CG+
Sbjct: 190 DLRKLKCEGYASVLSLGMYPTDPSQWQYGVALKYVNGVLDNNIIDTKCNACEMSGGVCGY 249

Query: 248 TPPDNSFVCVCGEKGFNTTTDC 267
            PP NSFVC+C + G+NT+ DC
Sbjct: 250 APPSNSFVCIC-KNGYNTSMDC 270

BLAST of MS012632 vs. NCBI nr
Match: XP_042971433.1 (wall-associated receptor kinase-like 15 [Carya illinoinensis] >KAG6660986.1 hypothetical protein CIPAW_03G143400 [Carya illinoinensis])

HSP 1 Score: 359.0 bits (920), Expect = 3.5e-95
Identity = 164/261 (62.84%), Postives = 205/261 (78.54%), Query Frame = 0

Query: 8   FHVIVCTSISSHRSVAASPPCRSTCGSLIVKYPFGTGYGCGSPRFSSHVTCSSD-DRLLL 67
           FH++     ++  ++A  P C+ TCGS+ VKYPFGTG GCGSPRF  +VTC SD D L+ 
Sbjct: 10  FHLLPVILFTAQLTLAPDPVCKGTCGSVQVKYPFGTGTGCGSPRFQPYVTCKSDEDLLVF 69

Query: 68  TTHTGDYPITSISYSASTVIISPPLMSTCSLMHE-SQTLGIDWTGPFQLGSSAFLLLDCE 127
           TTHTG YPITSISY+ ST+IISP  MSTC+ M + S +LG+DW  PFQLG S F+L+ C 
Sbjct: 70  TTHTGSYPITSISYTTSTLIISPSDMSTCTSMRQCSSSLGVDWASPFQLGPSTFILISCT 129

Query: 128 SSSASLTIRGSAVCDLSFSHLCASIYSCPAVVKLGLPLFPPTNSCCVYSPANFNGKGELE 187
             ++SLT++G+ +CD S+SHLCAS+Y+CPAVV LGLPLFPPTNSCCVYSPAN NGKGEL+
Sbjct: 130 PPTSSLTLKGTPICDPSYSHLCASLYTCPAVVSLGLPLFPPTNSCCVYSPANLNGKGELD 189

Query: 188 LRELKCGGYSSVVSLGQYQTDPTRWEYGVELKYGYGALENSVVENKCNGCEMSGGACGFT 247
           LR LKC GY+SV+SLG Y TDP++W YGV LKY  G L+N++++ KCN CEMSGG CG+ 
Sbjct: 190 LRALKCEGYASVLSLGMYPTDPSQWLYGVALKYVNGVLDNNIIDTKCNACEMSGGVCGYA 249

Query: 248 PPDNSFVCVCGEKGFNTTTDC 267
           PP NSFVCVC + G+NT+ DC
Sbjct: 250 PPSNSFVCVC-KNGYNTSMDC 269

BLAST of MS012632 vs. NCBI nr
Match: KAG2716665.1 (hypothetical protein I3760_03G137500 [Carya illinoinensis])

HSP 1 Score: 358.6 bits (919), Expect = 4.6e-95
Identity = 164/261 (62.84%), Postives = 205/261 (78.54%), Query Frame = 0

Query: 8   FHVIVCTSISSHRSVAASPPCRSTCGSLIVKYPFGTGYGCGSPRFSSHVTCSSD-DRLLL 67
           FH++     ++  ++A  P C+ TCGS+ VKYPFGTG GCGSPRF  +VTC SD D L+ 
Sbjct: 10  FHLLPVILFTAKLTLAPDPVCKGTCGSVQVKYPFGTGTGCGSPRFQPYVTCKSDEDLLVF 69

Query: 68  TTHTGDYPITSISYSASTVIISPPLMSTCSLMHE-SQTLGIDWTGPFQLGSSAFLLLDCE 127
           TTHTG YPITSISY+ ST+IISP  MSTC+ M + S +LG+DW  PFQLG S F+L+ C 
Sbjct: 70  TTHTGSYPITSISYTTSTLIISPSDMSTCTSMRQCSSSLGVDWASPFQLGPSTFILISCT 129

Query: 128 SSSASLTIRGSAVCDLSFSHLCASIYSCPAVVKLGLPLFPPTNSCCVYSPANFNGKGELE 187
             ++SLT++G+ +CD S+SHLCAS+Y+CPAVV LGLPLFPPTNSCCVYSPAN NGKGEL+
Sbjct: 130 PPTSSLTLKGTPICDPSYSHLCASLYTCPAVVSLGLPLFPPTNSCCVYSPANLNGKGELD 189

Query: 188 LRELKCGGYSSVVSLGQYQTDPTRWEYGVELKYGYGALENSVVENKCNGCEMSGGACGFT 247
           LR LKC GY+SV+SLG Y TDP++W YGV LKY  G L+N++++ KCN CEMSGG CG+ 
Sbjct: 190 LRALKCEGYTSVLSLGMYPTDPSQWLYGVALKYVNGVLDNNIIDTKCNACEMSGGVCGYA 249

Query: 248 PPDNSFVCVCGEKGFNTTTDC 267
           PP NSFVCVC + G+NT+ DC
Sbjct: 250 PPSNSFVCVC-KNGYNTSMDC 269

BLAST of MS012632 vs. NCBI nr
Match: KAG7987547.1 (hypothetical protein I3843_03G139400 [Carya illinoinensis])

HSP 1 Score: 357.5 bits (916), Expect = 1.0e-94
Identity = 163/261 (62.45%), Postives = 204/261 (78.16%), Query Frame = 0

Query: 8   FHVIVCTSISSHRSVAASPPCRSTCGSLIVKYPFGTGYGCGSPRFSSHVTCSSD-DRLLL 67
           FH++     ++  ++A  P C+ TCGS+ VKYPFGTG GCGSPRF  +VTC SD D L+ 
Sbjct: 10  FHLLPVILFTAQLTLAPDPVCKGTCGSVQVKYPFGTGTGCGSPRFQPYVTCKSDEDLLVF 69

Query: 68  TTHTGDYPITSISYSASTVIISPPLMSTCSLMHE-SQTLGIDWTGPFQLGSSAFLLLDCE 127
           TTH G YPITSISYS ST+IISP  MSTC+ M + S +LG+DW  PFQLG S F+L+ C 
Sbjct: 70  TTHRGSYPITSISYSTSTLIISPSDMSTCTSMRQCSSSLGVDWASPFQLGPSTFILISCT 129

Query: 128 SSSASLTIRGSAVCDLSFSHLCASIYSCPAVVKLGLPLFPPTNSCCVYSPANFNGKGELE 187
             ++SLT++G+ +CD S+SHLCAS+Y+CPAV+ LGLPLFPPTNSCCVYSPAN NGKGEL+
Sbjct: 130 PPTSSLTLKGTPICDPSYSHLCASLYTCPAVISLGLPLFPPTNSCCVYSPANLNGKGELD 189

Query: 188 LRELKCGGYSSVVSLGQYQTDPTRWEYGVELKYGYGALENSVVENKCNGCEMSGGACGFT 247
           LR LKC GY+SV+SLG Y TDP++W YGV LKY  G L+N++++ KCN CEMSGG CG+ 
Sbjct: 190 LRALKCEGYASVLSLGMYPTDPSQWLYGVALKYVNGVLDNNIIDTKCNACEMSGGVCGYA 249

Query: 248 PPDNSFVCVCGEKGFNTTTDC 267
           PP NSFVCVC + G+NT+ DC
Sbjct: 250 PPSNSFVCVC-KNGYNTSMDC 269

BLAST of MS012632 vs. ExPASy TrEMBL
Match: A0A2I4HW38 (uncharacterized protein LOC109022025 OS=Juglans regia OX=51240 GN=LOC109022025 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 6.5e-95
Identity = 161/261 (61.69%), Postives = 206/261 (78.93%), Query Frame = 0

Query: 8   FHVIVCTSISSHRSVAASPPCRSTCGSLIVKYPFGTGYGCGSPRFSSHVTCSSD-DRLLL 67
           FH++     ++  ++A  P C+ TCGS+ VKYPFGTG GCGSPRF  +VTC SD D+L+ 
Sbjct: 10  FHLLPVILFTAQITLAPDPVCKGTCGSVQVKYPFGTGTGCGSPRFQPYVTCKSDEDQLVF 69

Query: 68  TTHTGDYPITSISYSASTVIISPPLMSTCSLMHE-SQTLGIDWTGPFQLGSSAFLLLDCE 127
           TTHTG YPITSISY+ ST+IISP  MSTC  M + S  LG+DW  PFQLG S F+L+ C 
Sbjct: 70  TTHTGSYPITSISYTTSTLIISPSDMSTCISMRQCSSILGVDWASPFQLGPSTFILISCT 129

Query: 128 SSSASLTIRGSAVCDLSFSHLCASIYSCPAVVKLGLPLFPPTNSCCVYSPANFNGKGELE 187
             ++SLT++G+ +CD S+SHLCAS+Y+CPAV+ LGLPLFPPTNSCCVYSPAN NGKGEL+
Sbjct: 130 PPTSSLTLKGTPICDPSYSHLCASLYTCPAVLSLGLPLFPPTNSCCVYSPANLNGKGELD 189

Query: 188 LRELKCGGYSSVVSLGQYQTDPTRWEYGVELKYGYGALENSVVENKCNGCEMSGGACGFT 247
           LR+LKC GY+SV+SLG Y TDP++W+YGV LKY  G L++++++ KCN CEMSGG CG+ 
Sbjct: 190 LRKLKCEGYASVLSLGMYPTDPSQWQYGVALKYVNGVLDSNIIDTKCNACEMSGGVCGYA 249

Query: 248 PPDNSFVCVCGEKGFNTTTDC 267
           PP NSFVC+C + G+NT+ DC
Sbjct: 250 PPSNSFVCIC-KNGYNTSMDC 269

BLAST of MS012632 vs. ExPASy TrEMBL
Match: A0A2C9UW97 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G133100 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.2e-94
Identity = 163/245 (66.53%), Postives = 193/245 (78.78%), Query Frame = 0

Query: 23  AASPPCRSTCGSLIVKYPFGTGYGCGSPRFSSHVTC-SSDDRLLLTTHTGDYPITSISYS 82
           A  PPCR+TCGSL VKYPFGT YGCGSPRF  ++TC SS D+LLLTTHTG YP+ SISY+
Sbjct: 22  ATDPPCRTTCGSLQVKYPFGTAYGCGSPRFYPYITCASSGDQLLLTTHTGSYPVISISYA 81

Query: 83  ASTVIISPPLMSTCSLMHESQTLGIDWTGPFQLGSSAFLLLDCESSSASLTIRGSAVCDL 142
           AST+ I+PP MSTC+ MH+S   G+DW  PFQLG S F+LL C   ++SLT++GS VCD 
Sbjct: 82  ASTITIAPPSMSTCTSMHQSLNFGLDWASPFQLGPSTFILLSCPPPTSSLTMKGSPVCDS 141

Query: 143 SFSHLCASIYSCPAVVKLGLPLFPPTNSCCVYSPANFNGKGELELRELKCGGYSSVVSLG 202
           S S+LCASIY+CPAV+ LGLPLFPPTN+CCVY+PANFNGK EL+L  LKC GY+SV SL 
Sbjct: 142 SSSYLCASIYTCPAVIGLGLPLFPPTNTCCVYAPANFNGKSELDLHMLKCLGYASVASLE 201

Query: 203 QYQTDPTRWEYGVELKYGYGALENSVVENKCNGCEMSGGACGFTPPDNSFVCVCGEKGFN 262
            Y TDP+RWEYGV L Y  GA ++  V+NKCN CE SGG CG+ PP+NSF C+C   G N
Sbjct: 202 DYPTDPSRWEYGVVLNYRSGAFDDFDVDNKCNTCESSGGVCGYAPPENSFTCLC-SGGIN 261

Query: 263 TTTDC 267
           TTTDC
Sbjct: 262 TTTDC 265

BLAST of MS012632 vs. ExPASy TrEMBL
Match: A0A061DHT7 (Membrane lipoprotein OS=Theobroma cacao OX=3641 GN=TCM_001086 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 9.4e-94
Identity = 173/266 (65.04%), Postives = 199/266 (74.81%), Query Frame = 0

Query: 1   LRFLIFTFHVIVCTSISSHRSVAASPPCRSTCGSLIVKYPFGTGYGCGSPRFSSHVTCSS 60
           L F+IF    ++      H S A    CRSTCGSL VKYPFGTGYGCGSPRF  +VTCSS
Sbjct: 6   LPFIIF----LITLFTPLHTSSAPGSACRSTCGSLQVKYPFGTGYGCGSPRFQPYVTCSS 65

Query: 61  DDRLLLTTHTGDYPITSISYSASTVIISPPLMSTCSLMHESQTLGIDWTGPFQLGSSAFL 120
            DRLLLTTHTG YPITS+SY  ST+II+PP MSTCS M +S  LG+DW  PFQLG S FL
Sbjct: 66  -DRLLLTTHTGSYPITSVSYKDSTLIITPPYMSTCSSMQQSPNLGLDWASPFQLGPSIFL 125

Query: 121 LLDCESSSASLTIRGSAVCDLSFSHLCASIYSCPAVVKLGLPLFPPTNSCCVYSPANFNG 180
           LL C   ++SLTI+GS VCD S S LCASIYSCP+VV LGL LFPPTN+CCVYSPANFN 
Sbjct: 126 LLSCTPPTSSLTIKGSPVCDPSSSDLCASIYSCPSVVSLGLHLFPPTNTCCVYSPANFNS 185

Query: 181 KGELELRELKCGGYSSVVSLGQYQTDPTRWEYGVELKYGYGALENSVVENKCNGCEMSGG 240
           KGEL+LR +KC GY+S+ S     TDP+RW+YGV LKY  GA ++  + NKCN CE SGG
Sbjct: 186 KGELDLRAMKCIGYASIASFQDSPTDPSRWQYGVTLKYTNGAFDDYYMNNKCNTCEDSGG 245

Query: 241 ACGFTPPDNSFVCVCGEKGFNTTTDC 267
            CG++PP NSFVC C + GFNTTT C
Sbjct: 246 LCGYSPPSNSFVCAC-KNGFNTTTAC 265

BLAST of MS012632 vs. ExPASy TrEMBL
Match: A0A5N5LZF2 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_011586 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.7e-93
Identity = 166/268 (61.94%), Postives = 210/268 (78.36%), Query Frame = 0

Query: 7   TFHVIVCTSISSH-------RSVAASPPCRSTCGSLIVKYPFGTGYGCGSPRFSSHVTCS 66
           +F++I+   + SH       +++A   PCR+TCGS+ VKYPFG+G+GCGSPRF  ++ CS
Sbjct: 6   SFNIIIFIVLCSHVTQFIPWQTLAKDLPCRTTCGSIQVKYPFGSGHGCGSPRFHPYIACS 65

Query: 67  SD-DRLLLTTHTGDYPITSISYSASTVIISPPLMSTCSLMHESQTLGIDWTGPFQLGSSA 126
            + D+LLLTTHTG YP+TSISY+ ST+II+PP MSTC+ M +S  LGIDW  PFQLG S 
Sbjct: 66  PEGDQLLLTTHTGSYPVTSISYTTSTLIITPPQMSTCTSMQQSPGLGIDWASPFQLGQST 125

Query: 127 FLLLDCESSSASLTIRGSAVCDLSFSHLCASIYSCPAVVKLGLPLFPPTNSCCVYSPANF 186
           FLLL C   ++SLTI+GS VCD S SHLCASIY+CP+V+ LGLPLFPPTN+CCVYSPANF
Sbjct: 126 FLLLSCTPPTSSLTIKGSPVCDTS-SHLCASIYTCPSVIGLGLPLFPPTNTCCVYSPANF 185

Query: 187 NGKGELELRELKCGGYSSVVSLGQYQTDPTRWEYGVELKYGYGALENSVVENKCNGCEMS 246
           N KGEL+L++LKC GY+SVVSL +Y TDP+RW+YGVEL+   GAL++   +NKCN CE+S
Sbjct: 186 NSKGELDLQKLKCMGYASVVSLQEYPTDPSRWQYGVELQSRGGALDDYYTDNKCNACEIS 245

Query: 247 GGACGFTPPDNSFVCVCGEKGFNTTTDC 267
           GG CG+ PP NSFVC+C +   NTT DC
Sbjct: 246 GGLCGYAPPVNSFVCLCSDT-INTTIDC 271

BLAST of MS012632 vs. ExPASy TrEMBL
Match: A0A6A1UJJ2 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G007265 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 4.7e-93
Identity = 159/260 (61.15%), Postives = 202/260 (77.69%), Query Frame = 0

Query: 9   HVIVCTSISSHRSVAASPPCRSTCGSLIVKYPFGTGYGCGSPRFSSHVTCS-SDDRLLLT 68
           H+++    +S  ++A+ P C+STCGSL +K+PFGTGYGCGSPRF  +VTC    D+LLLT
Sbjct: 17  HLLLIILFTSPLTLASDPACQSTCGSLQIKFPFGTGYGCGSPRFQPYVTCKPGGDQLLLT 76

Query: 69  THTGDYPITSISYSASTVIISPPLMSTCSLMHE-SQTLGIDWTGPFQLGSSAFLLLDCES 128
           THTG YP++SISY+ ST+ I+P  MSTC+ MH  S  LG+DWT PFQLG S F+L+ C  
Sbjct: 77  THTGSYPVSSISYTTSTITINPSDMSTCTSMHPCSSILGLDWTSPFQLGPSTFILVSCPP 136

Query: 129 SSASLTIRGSAVCDLSFSHLCASIYSCPAVVKLGLPLFPPTNSCCVYSPANFNGKGELEL 188
            ++SLT++G+ +CD S++ LCASIY+CPAVV LGLPLFPPTN+CCVYSP N N KGEL+L
Sbjct: 137 PTSSLTLKGTPICDPSYAFLCASIYTCPAVVSLGLPLFPPTNTCCVYSPGNLNNKGELDL 196

Query: 189 RELKCGGYSSVVSLGQYQTDPTRWEYGVELKYGYGALENSVVENKCNGCEMSGGACGFTP 248
             LKC GY+SVVSLG Y TDP++W YGV LKY  G L+N+++E +C  CEMSGG CG+ P
Sbjct: 197 HALKCDGYASVVSLGDYPTDPSQWVYGVALKYINGVLDNNIIETQCKACEMSGGVCGYAP 256

Query: 249 PDNSFVCVCGEKGFNTTTDC 267
           P NSFVCVC + G+NTT DC
Sbjct: 257 PSNSFVCVC-KNGYNTTMDC 275

BLAST of MS012632 vs. TAIR 10
Match: AT1G10380.1 (Putative membrane lipoprotein )

HSP 1 Score: 195.7 bits (496), Expect = 4.8e-50
Identity = 111/274 (40.51%), Postives = 149/274 (54.38%), Query Frame = 0

Query: 3   FLIFTFHVIVCTSISSHRSVAASPPCRSTCGSLIVKYPFGTGYGCGSPRFSSHVTCSSDD 62
           F IF F       +SSH    +S  C+ TCG + +KYP GTG GCG PRF+ ++TC  D 
Sbjct: 10  FFIFLFSFFF---LSSH---VSSQACQKTCGQIPIKYPLGTGSGCGDPRFTRYITCDPDQ 69

Query: 63  R-LLLTTHTGDYPITSISYSASTVIISPPLMSTCSLMHESQTLGIDWTGPFQL-GSSAFL 122
           + L LTTHTG YPITS+ Y+   + ++ P MSTC+    S   G+DW  PF     + F 
Sbjct: 70  QTLTLTTHTGSYPITSVDYAKQEIYVTDPSMSTCACTRPSHGFGLDWDAPFSFHDDTVFT 129

Query: 123 LLDC---ESSSASLTIRGS---AVCDLSFSHLCASIYS-CPAVVKLGLPLFPPTNSCCVY 182
           LLDC   ES   +    GS   ++CD   S +C  +YS C A+  + L +    ++CCVY
Sbjct: 130 LLDCSVDESPVFTPLSNGSGRVSLCDRQSSSICTFLYSNCRAISLINLQV----STCCVY 189

Query: 183 SPANFNGKGELELRELKCGGYSSVVSLGQYQ-TDPTRWEYGVELKYGYGALENSVVENKC 242
            P +     E++L +LKC  YS   +LG  Q + P  W YG+ LKY +   +       C
Sbjct: 190 VPLDLGPSFEMDLNKLKCSSYSGFYNLGPGQESHPENWNYGIALKYKFNVFDE--YPGVC 249

Query: 243 NGCEMSGGACGFTPPDNSFVCVCGEKGFNTTTDC 267
             CE S GACGF    +SFVC C   G NTT+DC
Sbjct: 250 GSCERSNGACGFNTQSSSFVCNC-PGGINTTSDC 270

BLAST of MS012632 vs. TAIR 10
Match: AT3G17350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50290.1); Has 203 Blast hits to 203 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 129.8 bits (325), Expect = 3.3e-30
Identity = 84/275 (30.55%), Postives = 130/275 (47.27%), Query Frame = 0

Query: 1   LRFLIFTFHVIVCTSISSHRSVAASPPCRSTCGSLIVKYPFGTGYGCGSPRFSSHVTCSS 60
           L F  F+F   + T      + +A+  CR+ CG++ + YPFG   GCGSP++     CS+
Sbjct: 4   LFFFFFSFLYTITTLTFPPLTTSAATSCRTLCGNIPINYPFGIDGGCGSPQYRGMFNCST 63

Query: 61  DDRLLLTTHTGDYPITSISYSASTVIISPPLMSTCSLM---HESQTLGIDWTGPFQLGSS 120
           D  L  TT +G Y + SI Y   T++I  P MSTCS++   H+ +   I  T       +
Sbjct: 64  D--LYFTTPSGSYKVQSIDYEKKTMVIFDPAMSTCSILQPHHDFKMADIQNTLIRPSYDT 123

Query: 121 AFLLLDCESSSASLTIRGSAVCDLSFSHLCASIYSCPAVVKLGLPLFPPTNSCCVYSP-- 180
            F L +C S+ + +  R   +C  +  H C  +YS     ++     P  N+  V++   
Sbjct: 124 VFALFNC-SNDSPVHNRYRNLCFNAAGHSCDELYSSCTSFRIFNTTSPYGNNSTVHTTPY 183

Query: 181 ---ANFNGKGELELRELKCGGYSSVVSLGQYQ-TDPTRWEYGVELKYGYGALENSVVENK 240
               N++    + +  L C  Y++V+  G+ +   P  W YG+EL Y       SV E  
Sbjct: 184 CCFTNYDTVRVMSMNILDCSHYTTVIDNGKMRGVGPLDWSYGIELSY-------SVTEIG 243

Query: 241 CNGCEMSGGACGFTPPDNSFVCVCGEKGFNTTTDC 267
           C+ C  SGG CGF      F+C C     N T +C
Sbjct: 244 CDRCRKSGGTCGFDAETEIFLCQCSGSNNNPTREC 268

BLAST of MS012632 vs. TAIR 10
Match: AT1G11915.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 261 Blast hits to 261 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.3 bits (238), Expect = 4.0e-20
Identity = 83/287 (28.92%), Postives = 124/287 (43.21%), Query Frame = 0

Query: 1   LRFLIFTFHVIVCTSISSHRSVAASPPCRSTCGSLIVKYPFGTGYGCGSPRFSSHVTCSS 60
           L   I  F +++   + S  + + S  CRS+CG++ + YPF    GCGSP +   + CS 
Sbjct: 4   LHSYIIFFSLLMTILLQSSTTSSQSNLCRSSCGNIPINYPFSIDDGCGSPYYRHMLICSD 63

Query: 61  DD-RLLLTTHTGDYPITSISYSASTVIISPPLMSTC---SLMHESQTLGIDWTGPFQLG- 120
           +D +L L T +G YP+ SISYS   +++S P M  C        +++  ID +  F +  
Sbjct: 64  NDTKLELRTPSGKYPVKSISYSDPHLLVSDPFMWNCQDRDNFRPTRSFSIDSSTHFTVSP 123

Query: 121 SSAFLLLDCESSSA----------SLTIRGSAVCDLSFSHLCASIYSCPAVVKLGLPLFP 180
            + +L  +C +                 R  + CD S S+LC  +  C +   LG  +  
Sbjct: 124 QNDYLFFNCNTDKVIVEPKPLFCERFPDRCDSSCD-SSSYLCRHLPECGSA--LGSRV-- 183

Query: 181 PTNSCCVYSPANFNGKGELELRELKCGGYSSV------VSLGQYQTDPTRWEYGVELKYG 240
              SCC Y P        L L    C  Y+SV      V    Y   P   EYG+ + Y 
Sbjct: 184 ---SCCSYYP---KATQSLRLMLQDCATYTSVYWRSTGVENAPYDQFP---EYGIRVDYE 243

Query: 241 YGALENSVVENKCNGCEMSGGACGFTPPDNSFVCVCGEKGFNTTTDC 267
           +      ++   C      GG CGF      F+C+C  K  N TT C
Sbjct: 244 FPVTMKCLL---CQETTKGGGVCGFNTRTRDFLCLC--KQGNVTTYC 271

BLAST of MS012632 vs. TAIR 10
Match: AT5G50290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 300 Blast hits to 300 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 95.5 bits (236), Expect = 6.8e-20
Identity = 77/261 (29.50%), Postives = 111/261 (42.53%), Query Frame = 0

Query: 28  CRSTCGSLIVKYPFGTGYGCGSPRFSSHVTCSSDDRLLLTTHTGDYPITSISYSASTVII 87
           CRS CG++ V YPFG   GCG P +   + C  +D L+    +G Y +  I Y+  ++ +
Sbjct: 22  CRSYCGNITVDYPFGIRNGCGHPGYRDLLFC-MNDVLMFHISSGSYRVLDIDYAYQSITL 81

Query: 88  SPPLMSTCSLMHESQTLG--------IDWTGPF--QLGSSAFLLLDCESSSASLT--IRG 147
             P MS C    E+  LG         DW  P+      + F+L+ C   S         
Sbjct: 82  HDPHMSNC----ETIVLGGKGNGFEAEDWRTPYFNPTSDNVFMLIGCSPKSPIFQGFPEK 141

Query: 148 SAVCDLSFSHLCASIYSCPAVVKLGLPLFPPTNS------CCVYSPANFNGKGELELREL 207
              C       C    SCPA   +G    P  +S      CC      F     + L +L
Sbjct: 142 KVPCRNISGMSCEEYMSCPAWDMVGYRQ-PGIHSGSGPPMCC---GVGFESVKAINLSKL 201

Query: 208 KCGGYSSVVSLGQYQ-TDPTRWEYGVELKYGYGALENSVVENKCNGCEMSGGACGFTPPD 267
           +C GYSS  +L   +   P+ W YG+ +KY    L+ S  +  C  C  + G CG+ P D
Sbjct: 202 ECEGYSSAYNLAPLKLRGPSDWAYGIRVKY---ELQGS--DAFCRACVATSGTCGYEPAD 261

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038903465.14.1e-12882.95uncharacterized protein LOC120090047 [Benincasa hispida][more]
XP_041005755.13.5e-9562.60uncharacterized protein LOC121250645 [Juglans microcarpa x Juglans regia][more]
XP_042971433.13.5e-9562.84wall-associated receptor kinase-like 15 [Carya illinoinensis] >KAG6660986.1 hypo... [more]
KAG2716665.14.6e-9562.84hypothetical protein I3760_03G137500 [Carya illinoinensis][more]
KAG7987547.11.0e-9462.45hypothetical protein I3843_03G139400 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2I4HW386.5e-9561.69uncharacterized protein LOC109022025 OS=Juglans regia OX=51240 GN=LOC109022025 P... [more]
A0A2C9UW973.2e-9466.53Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_12G133100 PE=4 SV=... [more]
A0A061DHT79.4e-9465.04Membrane lipoprotein OS=Theobroma cacao OX=3641 GN=TCM_001086 PE=4 SV=1[more]
A0A5N5LZF22.7e-9361.94Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_011586 PE=4 SV=1[more]
A0A6A1UJJ24.7e-9361.15Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G007265 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G10380.14.8e-5040.51Putative membrane lipoprotein [more]
AT3G17350.13.3e-3030.55unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G11915.14.0e-2028.92unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G50290.16.8e-2029.50unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025287Wall-associated receptor kinase, galacturonan-binding domainPFAMPF13947GUB_WAK_bindcoord: 28..87
e-value: 8.6E-12
score: 45.3
IPR032872Wall-associated receptor kinase, C-terminalPFAMPF14380WAK_assoccoord: 201..257
e-value: 3.4E-6
score: 27.7
NoneNo IPR availablePANTHERPTHR33355:SF1WALL-ASSOCIATED RECEPTOR KINASE-LIKE 15coord: 5..266
NoneNo IPR availablePANTHERPTHR33355WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATEDcoord: 5..266

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS012632.1MS012632.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0030247 polysaccharide binding