MS012606 (gene) Bitter gourd (TR) v1

Overview


Name	MS012606
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold63: 1988661 .. 1989206 (-)
RNA-Seq Expression	MS012606
Synteny	MS012606

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAAACTACCGCCGATCATGAACCCCAAAGCCATGGATTCGGCCGACATGCTCCTCATGGGGCTCGAATTTTCCCACAAACCCGGCGTTGACCTAATTCGGAATTGCGATCTCCCGCCGCCGCAGAAGATATTCACGGGCATGGCCAGAGTTAAAGATCGGGAGCGGGATGAGGCGGAATCCGGCGGCGTGGAGGAGAAATTGGAGCTACTGAAGGCTCTGAGGCTGTCGCAGACGCGGGCGAGAGAAGCGGAGAGAAAGGCCGCGAAATTGATGGAGGAGAGGGATTGTATCAGTAGGGCTTTCGAAGACGAGGCCAGATTGATTTTCTTTTACCGCCAATCGGTGAAGTTGCTGCAGCTTCGGCTCTCCAATTTGCAGAAAATGCACGACGAGGAAGAGAGCAGGAGAAATGGGGATTCCGATGCGCCGGCGGCCGGCGGCGGAGGCGGGGGCGGCGAAGCTATGAAATGGGTTTGGGCTTTGGCAATTTGCTTCACTGTTGTGGGAGTGGGCTTTCTCTACGGCTACACCTGTAATGTCGAT

mRNA sequence

CCCAAACTACCGCCGATCATGAACCCCAAAGCCATGGATTCGGCCGACATGCTCCTCATGGGGCTCGAATTTTCCCACAAACCCGGCGTTGACCTAATTCGGAATTGCGATCTCCCGCCGCCGCAGAAGATATTCACGGGCATGGCCAGAGTTAAAGATCGGGAGCGGGATGAGGCGGAATCCGGCGGCGTGGAGGAGAAATTGGAGCTACTGAAGGCTCTGAGGCTGTCGCAGACGCGGGCGAGAGAAGCGGAGAGAAAGGCCGCGAAATTGATGGAGGAGAGGGATTGTATCAGTAGGGCTTTCGAAGACGAGGCCAGATTGATTTTCTTTTACCGCCAATCGGTGAAGTTGCTGCAGCTTCGGCTCTCCAATTTGCAGAAAATGCACGACGAGGAAGAGAGCAGGAGAAATGGGGATTCCGATGCGCCGGCGGCCGGCGGCGGAGGCGGGGGCGGCGAAGCTATGAAATGGGTTTGGGCTTTGGCAATTTGCTTCACTGTTGTGGGAGTGGGCTTTCTCTACGGCTACACCTGTAATGTCGAT

Coding sequence (CDS)

CCCAAACTACCGCCGATCATGAACCCCAAAGCCATGGATTCGGCCGACATGCTCCTCATGGGGCTCGAATTTTCCCACAAACCCGGCGTTGACCTAATTCGGAATTGCGATCTCCCGCCGCCGCAGAAGATATTCACGGGCATGGCCAGAGTTAAAGATCGGGAGCGGGATGAGGCGGAATCCGGCGGCGTGGAGGAGAAATTGGAGCTACTGAAGGCTCTGAGGCTGTCGCAGACGCGGGCGAGAGAAGCGGAGAGAAAGGCCGCGAAATTGATGGAGGAGAGGGATTGTATCAGTAGGGCTTTCGAAGACGAGGCCAGATTGATTTTCTTTTACCGCCAATCGGTGAAGTTGCTGCAGCTTCGGCTCTCCAATTTGCAGAAAATGCACGACGAGGAAGAGAGCAGGAGAAATGGGGATTCCGATGCGCCGGCGGCCGGCGGCGGAGGCGGGGGCGGCGAAGCTATGAAATGGGTTTGGGCTTTGGCAATTTGCTTCACTGTTGTGGGAGTGGGCTTTCTCTACGGCTACACCTGTAATGTCGAT

Protein sequence

PKLPPIMNPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFTGMARVKDRERDEAESGGVEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVKLLQLRLSNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCNVD

Homology

[Close]

BLAST of MS012606 vs. NCBI nr
Match: XP_022136673.1 (uncharacterized protein LOC111008325 [Momordica charantia])

HSP 1 Score: 339.3 bits (869), Expect = 2.0e-89
Identity = 175/176 (99.43%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 7   MNPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFTGMARVKDRERDEAESGGVEE 66
           MNPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFTGMARVKDRERDEAESGGVEE
Sbjct: 1   MNPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFTGMARVKDRERDEAESGGVEE 60

Query: 67  KLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVKLLQLRLSNL 126
           KLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVKLLQLRLSNL
Sbjct: 61  KLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVKLLQLRLSNL 120

Query: 127 QKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCNVD 183
           QKMHDEEESRRNGDSDAPAA GGGGGGEAMKWVWALAICFTVVGVGFLYGYTCNVD
Sbjct: 121 QKMHDEEESRRNGDSDAPAA-GGGGGGEAMKWVWALAICFTVVGVGFLYGYTCNVD 175

[Close]

BLAST of MS012606 vs. NCBI nr
Match: KAG6600670.1 (hypothetical protein SDJN03_05903, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 222.2 bits (565), Expect = 3.5e-54
Identity = 123/180 (68.33%), Postives = 140/180 (77.78%), Query Frame = 0


Query: 8   NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFT----GMARVKDRERDEAESGG 67
           NP+A+DS DML   LEF +KPGVDLIRNCDLPPPQK+FT    G    + R R+E E+GG
Sbjct: 19  NPEALDSTDML---LEFPYKPGVDLIRNCDLPPPQKLFTASDKGAMAGRGRGREEVETGG 78

Query: 68  VEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVKLLQLRL 127
           +EEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIF YRQS+KL++LR+
Sbjct: 79  MEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRV 138

Query: 128 SNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTC-NVD 183
           S L+K  +EEE   NG+         G G   +KWVWALAIC +VVGVG L GYTC NVD
Sbjct: 139 SKLKKRKEEEEDNGNGN---------GNGNRGVKWVWALAICLSVVGVGILLGYTCSNVD 186

[Close]

BLAST of MS012606 vs. NCBI nr
Match: XP_022970087.1 (uncharacterized protein LOC111469054 [Cucurbita maxima])

HSP 1 Score: 218.4 bits (555), Expect = 5.1e-53
Identity = 123/180 (68.33%), Postives = 139/180 (77.22%), Query Frame = 0


Query: 8   NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFT----GMARVKDRERDEAESGG 67
           NP+A+DS DML   LEF +KPGVDLIRNCDLPPPQK+FT    G    + R R+E E+GG
Sbjct: 61  NPEALDSTDML---LEFPYKPGVDLIRNCDLPPPQKLFTASDKGAMAARGRGREEVEAGG 120

Query: 68  VEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVKLLQLRL 127
           +EEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIF YRQS+KL++LR+
Sbjct: 121 MEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRV 180

Query: 128 SNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTC-NVD 183
           S L+K  +EEE            G G GGG  +KWVWALAIC +VVGVG L GY C NVD
Sbjct: 181 SKLKKRKEEEEDN----------GNGNGGG--VKWVWALAICLSVVGVGILLGYACSNVD 225

[Close]

BLAST of MS012606 vs. NCBI nr
Match: KAG7031309.1 (hypothetical protein SDJN02_05349, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 215.7 bits (548), Expect = 3.3e-52
Identity = 118/177 (66.67%), Postives = 135/177 (76.27%), Query Frame = 0


Query: 8   NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFT----GMARVKDRERDEAESGG 67
           NP+A+DS DML   LEF +KPGVDLIRNCDLPPPQK+FT    G    + R R+E E+GG
Sbjct: 19  NPEALDSTDML---LEFPYKPGVDLIRNCDLPPPQKLFTASDKGAMAGRGRGREEVETGG 78

Query: 68  VEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVKLLQLRL 127
           +EEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIF YRQS+KL++LR+
Sbjct: 79  MEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRV 138

Query: 128 SNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCN 181
           S L+K  +EEE               G G   +KWVWALAIC +VVGVG L GYTC+
Sbjct: 139 SKLKKRKEEEED-------------NGNGNRGVKWVWALAICLSVVGVGILLGYTCS 179

[Close]

BLAST of MS012606 vs. NCBI nr
Match: XP_022943244.1 (uncharacterized protein LOC111448032 [Cucurbita moschata])

HSP 1 Score: 213.4 bits (542), Expect = 1.6e-51
Identity = 117/177 (66.10%), Postives = 134/177 (75.71%), Query Frame = 0


Query: 8   NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFT----GMARVKDRERDEAESGG 67
           NP+A+DS DML   LEF +KP VDLIRNCDLPPPQK+FT    G    + R R+E E+GG
Sbjct: 19  NPEALDSTDML---LEFPYKPCVDLIRNCDLPPPQKLFTASDKGAMAARGRGREEVETGG 78

Query: 68  VEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVKLLQLRL 127
           +EEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIF YRQS+KL++LR+
Sbjct: 79  MEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRV 138

Query: 128 SNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCN 181
           S L+K  +EEE               G G   +KWVWALAIC +VVGVG L GYTC+
Sbjct: 139 SKLKKRKEEEED-------------NGNGNRGVKWVWALAICLSVVGVGILLGYTCS 179

[Close]

BLAST of MS012606 vs. ExPASy TrEMBL
Match: A0A6J1C873 (uncharacterized protein LOC111008325 OS=Momordica charantia OX=3673 GN=LOC111008325 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 9.6e-90
Identity = 175/176 (99.43%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 7   MNPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFTGMARVKDRERDEAESGGVEE 66
           MNPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFTGMARVKDRERDEAESGGVEE
Sbjct: 1   MNPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFTGMARVKDRERDEAESGGVEE 60

Query: 67  KLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVKLLQLRLSNL 126
           KLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVKLLQLRLSNL
Sbjct: 61  KLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVKLLQLRLSNL 120

Query: 127 QKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCNVD 183
           QKMHDEEESRRNGDSDAPAA GGGGGGEAMKWVWALAICFTVVGVGFLYGYTCNVD
Sbjct: 121 QKMHDEEESRRNGDSDAPAA-GGGGGGEAMKWVWALAICFTVVGVGFLYGYTCNVD 175

[Close]

BLAST of MS012606 vs. ExPASy TrEMBL
Match: A0A6J1HY55 (uncharacterized protein LOC111469054 OS=Cucurbita maxima OX=3661 GN=LOC111469054 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.5e-53
Identity = 123/180 (68.33%), Postives = 139/180 (77.22%), Query Frame = 0


Query: 8   NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFT----GMARVKDRERDEAESGG 67
           NP+A+DS DML   LEF +KPGVDLIRNCDLPPPQK+FT    G    + R R+E E+GG
Sbjct: 61  NPEALDSTDML---LEFPYKPGVDLIRNCDLPPPQKLFTASDKGAMAARGRGREEVEAGG 120

Query: 68  VEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVKLLQLRL 127
           +EEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIF YRQS+KL++LR+
Sbjct: 121 MEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRV 180

Query: 128 SNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTC-NVD 183
           S L+K  +EEE            G G GGG  +KWVWALAIC +VVGVG L GY C NVD
Sbjct: 181 SKLKKRKEEEEDN----------GNGNGGG--VKWVWALAICLSVVGVGILLGYACSNVD 225

[Close]

BLAST of MS012606 vs. ExPASy TrEMBL
Match: A0A6J1FTQ9 (uncharacterized protein LOC111448032 OS=Cucurbita moschata OX=3662 GN=LOC111448032 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 8.0e-52
Identity = 117/177 (66.10%), Postives = 134/177 (75.71%), Query Frame = 0


Query: 8   NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFT----GMARVKDRERDEAESGG 67
           NP+A+DS DML   LEF +KP VDLIRNCDLPPPQK+FT    G    + R R+E E+GG
Sbjct: 19  NPEALDSTDML---LEFPYKPCVDLIRNCDLPPPQKLFTASDKGAMAARGRGREEVETGG 78

Query: 68  VEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVKLLQLRL 127
           +EEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIF YRQS+KL++LR+
Sbjct: 79  MEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRV 138

Query: 128 SNLQKMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCN 181
           S L+K  +EEE               G G   +KWVWALAIC +VVGVG L GYTC+
Sbjct: 139 SKLKKRKEEEED-------------NGNGNRGVKWVWALAICLSVVGVGILLGYTCS 179

[Close]

BLAST of MS012606 vs. ExPASy TrEMBL
Match: A0A5D3BEN7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00050 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.4e-43
Identity = 105/173 (60.69%), Postives = 121/173 (69.94%), Query Frame = 0


Query: 8   NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFTGMARVKDRERDEAESGGVEEK 67
           N +++DS DM+        + GV+LIRNCDLPPPQK+F                 G+EEK
Sbjct: 8   NRQSLDSRDMV-------QRDGVELIRNCDLPPPQKVF---------------KSGMEEK 67

Query: 68  LELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVKLLQLRLSNLQ 127
           +ELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL+F YRQS+KLL+LR+  LQ
Sbjct: 68  IELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLMFCYRQSLKLLELRVCKLQ 127

Query: 128 KMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCN 181
           K   EE      + +    GG GG    MKWVWALAIC +VVGVGFL GYTCN
Sbjct: 128 KQEVEEVEEEEEEEERDENGGNGG----MKWVWALAICLSVVGVGFLLGYTCN 154

[Close]

BLAST of MS012606 vs. ExPASy TrEMBL
Match: A0A1S3C2P7 (uncharacterized protein LOC103495794 OS=Cucumis melo OX=3656 GN=LOC103495794 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.4e-43
Identity = 105/173 (60.69%), Postives = 121/173 (69.94%), Query Frame = 0


Query: 8   NPKAMDSADMLLMGLEFSHKPGVDLIRNCDLPPPQKIFTGMARVKDRERDEAESGGVEEK 67
           N +++DS DM+        + GV+LIRNCDLPPPQK+F                 G+EEK
Sbjct: 8   NRQSLDSRDMV-------QRDGVELIRNCDLPPPQKVF---------------KSGMEEK 67

Query: 68  LELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVKLLQLRLSNLQ 127
           +ELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARL+F YRQS+KLL+LR+  LQ
Sbjct: 68  IELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLMFCYRQSLKLLELRVCKLQ 127

Query: 128 KMHDEEESRRNGDSDAPAAGGGGGGGEAMKWVWALAICFTVVGVGFLYGYTCN 181
           K   EE      + +    GG GG    MKWVWALAIC +VVGVGFL GYTCN
Sbjct: 128 KQEVEEVEEEEEEEERDENGGNGG----MKWVWALAICLSVVGVGFLLGYTCN 154

[Close]

BLAST of MS012606 vs. TAIR 10
Match: AT1G01240.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 95 Blast hits to 78 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 9.7e-10
Identity = 59/184 (32.07%), Postives = 87/184 (47.28%), Query Frame = 0


Query: 33  IRNCDLPPPQKIFTGMARV-------------------KDR-ERDEAESGGVEEKL---- 92
           I+NCDLPPPQK+   +                      KDR ER  + +G  E K     
Sbjct: 141 IQNCDLPPPQKLHKSIHSSSGEKGFKTAVKSPWKQGVWKDRFERSLSYNGSTESKNTSPM 200

Query: 93  -----------ELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVK 152
                      +LL+ALR SQTRAREAER A +   E+D +      +A  +  Y+Q +K
Sbjct: 201 SSPRSDDLSKGQLLEALRHSQTRAREAERAAREACAEKDRVITILLKQASQMLAYKQWLK 260

Query: 153 LLQLRLSNLQ-KMHDEEESRRNGDS--DAPAAGGGGGGGEAMKWVWALAICFTVVGVGFL 179
           LL++    LQ K  +E+E +  G +       G     GE  +++ A A+ F+++G G L
Sbjct: 261 LLEMEALYLQMKKEEEQEEQVKGMNLKKRKQRGEKKKKGETGRYMMAFALGFSLIGAGLL 320

[Close]

BLAST of MS012606 vs. TAIR 10
Match: AT1G01240.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 9.7e-10
Identity = 59/184 (32.07%), Postives = 87/184 (47.28%), Query Frame = 0


Query: 33  IRNCDLPPPQKIFTGMARV-------------------KDR-ERDEAESGGVEEKL---- 92
           I+NCDLPPPQK+   +                      KDR ER  + +G  E K     
Sbjct: 141 IQNCDLPPPQKLHKSIHSSSGEKGFKTAVKSPWKQGVWKDRFERSLSYNGSTESKNTSPM 200

Query: 93  -----------ELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVK 152
                      +LL+ALR SQTRAREAER A +   E+D +      +A  +  Y+Q +K
Sbjct: 201 SSPRSDDLSKGQLLEALRHSQTRAREAERAAREACAEKDRVITILLKQASQMLAYKQWLK 260

Query: 153 LLQLRLSNLQ-KMHDEEESRRNGDS--DAPAAGGGGGGGEAMKWVWALAICFTVVGVGFL 179
           LL++    LQ K  +E+E +  G +       G     GE  +++ A A+ F+++G G L
Sbjct: 261 LLEMEALYLQMKKEEEQEEQVKGMNLKKRKQRGEKKKKGETGRYMMAFALGFSLIGAGLL 320

[Close]

BLAST of MS012606 vs. TAIR 10
Match: AT1G01240.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 9.7e-10
Identity = 59/184 (32.07%), Postives = 87/184 (47.28%), Query Frame = 0


Query: 33  IRNCDLPPPQKIFTGMARV-------------------KDR-ERDEAESGGVEEKL---- 92
           I+NCDLPPPQK+   +                      KDR ER  + +G  E K     
Sbjct: 141 IQNCDLPPPQKLHKSIHSSSGEKGFKTAVKSPWKQGVWKDRFERSLSYNGSTESKNTSPM 200

Query: 93  -----------ELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVK 152
                      +LL+ALR SQTRAREAER A +   E+D +      +A  +  Y+Q +K
Sbjct: 201 SSPRSDDLSKGQLLEALRHSQTRAREAERAAREACAEKDRVITILLKQASQMLAYKQWLK 260

Query: 153 LLQLRLSNLQ-KMHDEEESRRNGDS--DAPAAGGGGGGGEAMKWVWALAICFTVVGVGFL 179
           LL++    LQ K  +E+E +  G +       G     GE  +++ A A+ F+++G G L
Sbjct: 261 LLEMEALYLQMKKEEEQEEQVKGMNLKKRKQRGEKKKKGETGRYMMAFALGFSLIGAGLL 320

[Close]

BLAST of MS012606 vs. TAIR 10
Match: AT2G46550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-09
Identity = 60/189 (31.75%), Postives = 86/189 (45.50%), Query Frame = 0


Query: 30  VDLIRNCDLPPPQKI---FTGMARVKD-----------------------RERDEAESGG 89
           +D + NCDLP PQK+   + G  R  D                       + R EA S  
Sbjct: 200 LDYVENCDLPTPQKMKRSYYGSPRGFDSDGLRDYSVSGQTIKGTSKGSSCKNRPEASSES 259

Query: 90  VEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVKLLQLRL 149
              K ELL+ALR SQTRAREAE  A +   E++ + +    +A  +F Y+Q ++LLQL  
Sbjct: 260 DLSKSELLEALRRSQTRAREAENMAKEAYAEKEHLVKILLKQAAELFGYKQWLQLLQLEA 319

Query: 150 SNLQKMHDEEESRRNGD--------SDAPAAGGG------GGGGEAMKWVWALAICFTVV 179
             LQ  + E +++ N D        S+  A   G       G     K+   LA+  ++V
Sbjct: 320 LYLQIKNKEIDNKNNDDPGVSIPCWSNGKARKEGRKRRSKRGKPNGAKYAVGLALGMSLV 379

[Close]

BLAST of MS012606 vs. TAIR 10
Match: AT2G46550.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3). )

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-09
Identity = 60/189 (31.75%), Postives = 86/189 (45.50%), Query Frame = 0


Query: 30  VDLIRNCDLPPPQKI---FTGMARVKD-----------------------RERDEAESGG 89
           +D + NCDLP PQK+   + G  R  D                       + R EA S  
Sbjct: 60  LDYVENCDLPTPQKMKRSYYGSPRGFDSDGLRDYSVSGQTIKGTSKGSSCKNRPEASSES 119

Query: 90  VEEKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFFYRQSVKLLQLRL 149
              K ELL+ALR SQTRAREAE  A +   E++ + +    +A  +F Y+Q ++LLQL  
Sbjct: 120 DLSKSELLEALRRSQTRAREAENMAKEAYAEKEHLVKILLKQAAELFGYKQWLQLLQLEA 179

Query: 150 SNLQKMHDEEESRRNGD--------SDAPAAGGG------GGGGEAMKWVWALAICFTVV 179
             LQ  + E +++ N D        S+  A   G       G     K+   LA+  ++V
Sbjct: 180 LYLQIKNKEIDNKNNDDPGVSIPCWSNGKARKEGRKRRSKRGKPNGAKYAVGLALGMSLV 239

The following BLAST results are available for this feature:

BLAST of MS012606 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136673.1	2.0e-89	99.43	uncharacterized protein LOC111008325 [Momordica charantia]	[more]
KAG6600670.1	3.5e-54	68.33	hypothetical protein SDJN03_05903, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022970087.1	5.1e-53	68.33	uncharacterized protein LOC111469054 [Cucurbita maxima]	[more]
KAG7031309.1	3.3e-52	66.67	hypothetical protein SDJN02_05349, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022943244.1	1.6e-51	66.10	uncharacterized protein LOC111448032 [Cucurbita moschata]	[more]

BLAST of MS012606 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS012606 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C873	9.6e-90	99.43	uncharacterized protein LOC111008325 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A6J1HY55	2.5e-53	68.33	uncharacterized protein LOC111469054 OS=Cucurbita maxima OX=3661 GN=LOC111469054...	[more]
A0A6J1FTQ9	8.0e-52	66.10	uncharacterized protein LOC111448032 OS=Cucurbita moschata OX=3662 GN=LOC1114480...	[more]
A0A5D3BEN7	1.4e-43	60.69	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C2P7	1.4e-43	60.69	uncharacterized protein LOC103495794 OS=Cucumis melo OX=3656 GN=LOC103495794 PE=...	[more]

BLAST of MS012606 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01240.1	9.7e-10	32.07	unknown protein; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 1...	[more]
AT1G01240.2	9.7e-10	32.07	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G01240.3	9.7e-10	32.07	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G46550.1	1.3e-09	31.75	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G46550.2	1.3e-09	31.75	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 74..101
None	No IPR available	COILS	Coil	Coil	coord: 116..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..149
None	No IPR available	PANTHER	PTHR33868	EXPRESSED PROTEIN	coord: 12..180
None	No IPR available	PANTHER	PTHR33868:SF10	OS08G0483100 PROTEIN	coord: 12..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012606.1	MS012606.1	mRNA