MS012604 (gene) Bitter gourd (TR) v1

Overview


Name	MS012604
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Transcription factor bhlh
Location	scaffold63: 1976837 .. 1978102 (+)
RNA-Seq Expression	MS012604
Synteny	MS012604

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGGCGGCGAAGAGAGGGCGGCGAAAGCGGCGGAGGGGAAAGATGGTGAAGAATAGTGAAGAAATTGAGAACCAGAGAATGACCCACATCGCCGTCGAACGCAATCGGAGAAAGCAAATGAATGAGTACCTTTCTATGCTGCGTACCATGATGCCTTCTTCTTATACCCAAAGGGTAAGATTATGCTTCTTAATCCTCCTCTCCTACCCTCCTCCTCAATTTATCTTTTATGACTCTGTAATAGAAATCGTGTTGGCTTTGTCAGTTGGATCCTTGTAACAGGCGTTGTAGCACTGTCCTGAATAGAAAGAAAATCACGTTCTGCAGGACTTGAATGGGAGAAGGAGTATCCTCATTCGACCAGAAATCCACTAAGCCACTGTCTATTGGTAGTTACCACTTCAATTTTTAAAATATCTATATTTAATAGATATTTAAATTTTAGAAAATATCTAATAAATAAAAAATTTATGGACACAAGCTTACTTTCTTGATTTTTTCTTTTTAATTCTTGAACCGGGACTTTTAAAATTATGAATGTCTAGTCACGTAGTTTAAAAAAATTAACCTTTCATAATATCTAATAAAATTTTGTTAATGTGTAACTCTCAATCTCACGCCATAAAAATGTCTTAATTTTCTTTTCTCCCAACTAATATGTTGAAAGGATCAAATAAATTGTCAACATGAGTATAATTCAACGATAATTAACACCTATTTCAAATCGAGAGACTGTGAGTTCAAATCTCTCACCCCACCTAATATCCTAAAAAATATCAAGTACAGTAAATATATCATATAACAACGAACAAAACTAAACTAAAGGTAGAAAAATTATTAGACACAAAATTTAAAGTTCTCAAGTGGGTGGAAGAATTAAACAGAGAAGATCGCAAAATCTTAATTTAATCTGAAAAATGGTGAAATGGGCAGGGAGACCAGGCATCGATCGTGGGAGGCACGATCAACTTTGTGAAGGAGCTGGAACAACTTGTGCAATGCTTAGAGGCTGAGAAGCAAACCCATAATTTTTCCTCCGGCCGTGACTCGGTCAACTCGGCCGCGGAGAATCGGGCGATGACGGTGGACGTGGAGGTGACGGTGATAGAAAGCTACGCCAATATCAAGATGATAGCAGAGAAGCGGCCGAGGCAGCTTCTAAAAGTGGTGGTGGAATTACATTCTCTTCACCTTTTAGTTCTTCACGTTAACGTCACAACTATTCGCGAAACGGTTCTCTATTGTTTCAGCGTTAAGGTAAATCAA

mRNA sequence

CCGGCGGCGAAGAGAGGGCGGCGAAAGCGGCGGAGGGGAAAGATGGTGAAGAATAGTGAAGAAATTGAGAACCAGAGAATGACCCACATCGCCGTCGAACGCAATCGGAGAAAGCAAATGAATGAGTACCTTTCTATGCTGCGTACCATGATGCCTTCTTCTTATACCCAAAGGGGAGACCAGGCATCGATCGTGGGAGGCACGATCAACTTTGTGAAGGAGCTGGAACAACTTGTGCAATGCTTAGAGGCTGAGAAGCAAACCCATAATTTTTCCTCCGGCCGTGACTCGGTCAACTCGGCCGCGGAGAATCGGGCGATGACGGTGGACGTGGAGGTGACGGTGATAGAAAGCTACGCCAATATCAAGATGATAGCAGAGAAGCGGCCGAGGCAGCTTCTAAAAGTGGTGGTGGAATTACATTCTCTTCACCTTTTAGTTCTTCACGTTAACGTCACAACTATTCGCGAAACGGTTCTCTATTGTTTCAGCGTTAAGGTAAATCAA

Coding sequence (CDS)

CCGGCGGCGAAGAGAGGGCGGCGAAAGCGGCGGAGGGGAAAGATGGTGAAGAATAGTGAAGAAATTGAGAACCAGAGAATGACCCACATCGCCGTCGAACGCAATCGGAGAAAGCAAATGAATGAGTACCTTTCTATGCTGCGTACCATGATGCCTTCTTCTTATACCCAAAGGGGAGACCAGGCATCGATCGTGGGAGGCACGATCAACTTTGTGAAGGAGCTGGAACAACTTGTGCAATGCTTAGAGGCTGAGAAGCAAACCCATAATTTTTCCTCCGGCCGTGACTCGGTCAACTCGGCCGCGGAGAATCGGGCGATGACGGTGGACGTGGAGGTGACGGTGATAGAAAGCTACGCCAATATCAAGATGATAGCAGAGAAGCGGCCGAGGCAGCTTCTAAAAGTGGTGGTGGAATTACATTCTCTTCACCTTTTAGTTCTTCACGTTAACGTCACAACTATTCGCGAAACGGTTCTCTATTGTTTCAGCGTTAAGGTAAATCAA

Protein sequence

PAAKRGRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGDQASIVGGTINFVKELEQLVQCLEAEKQTHNFSSGRDSVNSAAENRAMTVDVEVTVIESYANIKMIAEKRPRQLLKVVVELHSLHLLVLHVNVTTIRETVLYCFSVKVNQ

Homology

[Close]

BLAST of MS012604 vs. NCBI nr
Match: XP_022136403.1 (transcription factor bHLH94-like [Momordica charantia])

HSP 1 Score: 300.1 bits (767), Expect = 1.2e-77
Identity = 162/167 (97.01%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 1   PAAKRGRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGD 60
           PAAKRGRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGD
Sbjct: 84  PAAKRGRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGD 143

Query: 61  QASIVGGTINFVKELEQLVQCLEAEKQTHNFSSGRDSVNSAAENRAMTVDVEVTVIESYA 120
           QASIVGGTINFVKELEQLVQCLEAEKQTHNF SGRDSVNSAAENRAMTVDVEVTVIESYA
Sbjct: 144 QASIVGGTINFVKELEQLVQCLEAEKQTHNFFSGRDSVNSAAENRAMTVDVEVTVIESYA 203

Query: 121 NIKMIAEKRPRQLLKVVVELHSLHLLVLHVNVTTIRETVLYCFSVKV 168
           NIKMIAEKRPRQLLKVVVELHSLHLLVLH+NVTTIRE VLY FSVK+
Sbjct: 204 NIKMIAEKRPRQLLKVVVELHSLHLLVLHINVTTIREMVLYYFSVKI 250

[Close]

BLAST of MS012604 vs. NCBI nr
Match: XP_023001108.1 (transcription factor bHLH94-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 203.8 bits (517), Expect = 1.2e-48
Identity = 119/164 (72.56%), Postives = 129/164 (78.66%), Query Frame = 0


Query: 6   GRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGDQASIV 65
           G+R R RGKMVK  EEIE QRM HIAVERNRRKQMNEYL +LR+MMPSSYTQRGDQASIV
Sbjct: 53  GKRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIV 112

Query: 66  GGTINFVKELEQLVQCLEAEKQTHN--FSSGRDSVNSAAENRAMTVDVEVTVIESYANIK 125
           GGTI FVKELEQLVQ LE +KQ H     SG+DS  S          VEV VIESYANIK
Sbjct: 113 GGTIKFVKELEQLVQWLEGKKQRHERICYSGQDSGES---------KVEVRVIESYANIK 172

Query: 126 MIAEKRPRQLLKVVVELHSLHLLVLHVNVTTIRETVLYCFSVKV 168
           M AE RP+QLLKV +ELHSL LL+LHVNVTTIR+ V YCFSVK+
Sbjct: 173 MRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFSVKI 207

[Close]

BLAST of MS012604 vs. NCBI nr
Match: XP_023001192.1 (transcription factor bHLH94-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 203.8 bits (517), Expect = 1.2e-48
Identity = 119/164 (72.56%), Postives = 129/164 (78.66%), Query Frame = 0


Query: 6   GRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGDQASIV 65
           G+R R RGKMVK  EEIE QRM HIAVERNRRKQMNEYL +LR+MMPSSYTQRGDQASIV
Sbjct: 17  GKRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIV 76

Query: 66  GGTINFVKELEQLVQCLEAEKQTHN--FSSGRDSVNSAAENRAMTVDVEVTVIESYANIK 125
           GGTI FVKELEQLVQ LE +KQ H     SG+DS  S          VEV VIESYANIK
Sbjct: 77  GGTIKFVKELEQLVQWLEGKKQRHERICYSGQDSGES---------KVEVRVIESYANIK 136

Query: 126 MIAEKRPRQLLKVVVELHSLHLLVLHVNVTTIRETVLYCFSVKV 168
           M AE RP+QLLKV +ELHSL LL+LHVNVTTIR+ V YCFSVK+
Sbjct: 137 MRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFSVKI 171

[Close]

BLAST of MS012604 vs. NCBI nr
Match: KAG7031312.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 199.1 bits (505), Expect = 3.0e-47
Identity = 113/162 (69.75%), Postives = 128/162 (79.01%), Query Frame = 0


Query: 6   GRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGDQASIV 65
           G+R  RRGKMVK  EEIE QRM HIAVERNRRKQMNEYL +LR+MMPSSYTQRGDQASIV
Sbjct: 44  GKRWGRRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIV 103

Query: 66  GGTINFVKELEQLVQCLEAEKQTHNFSSGRDSVNSAAENRAMTVDVEVTVIESYANIKMI 125
           GGTI FVKELEQLVQ LE +KQ H      + +  + ++ +    VEV VIE YANIKM 
Sbjct: 104 GGTIKFVKELEQLVQWLEGKKQRH------EHICYSGQDYSGESKVEVRVIERYANIKMR 163

Query: 126 AEKRPRQLLKVVVELHSLHLLVLHVNVTTIRETVLYCFSVKV 168
           AE RP+QLLKV +ELHSL LL+LHVNVTTIR+ V YCFSVK+
Sbjct: 164 AENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFSVKI 199

[Close]

BLAST of MS012604 vs. NCBI nr
Match: XP_022943243.1 (transcription factor bHLH94-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 199.1 bits (505), Expect = 3.0e-47
Identity = 113/162 (69.75%), Postives = 128/162 (79.01%), Query Frame = 0


Query: 6   GRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGDQASIV 65
           G+R  RRGKMVK  EEIE QRM HIAVERNRRKQMNEYL +LR+MMPSSYTQRGDQASIV
Sbjct: 17  GKRWGRRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIV 76

Query: 66  GGTINFVKELEQLVQCLEAEKQTHNFSSGRDSVNSAAENRAMTVDVEVTVIESYANIKMI 125
           GGTI FVKELEQLVQ LE +KQ H      + +  + ++ +    VEV VIE YANIKM 
Sbjct: 77  GGTIKFVKELEQLVQWLEGKKQRH------EHICYSGQDYSGESKVEVRVIERYANIKMR 136

Query: 126 AEKRPRQLLKVVVELHSLHLLVLHVNVTTIRETVLYCFSVKV 168
           AE RP+QLLKV +ELHSL LL+LHVNVTTIR+ V YCFSVK+
Sbjct: 137 AENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFSVKI 172

[Close]

BLAST of MS012604 vs. ExPASy Swiss-Prot
Match: Q9SK91 (Transcription factor bHLH94 OS=Arabidopsis thaliana OX=3702 GN=BHLH94 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 8.7e-42
Identity = 97/185 (52.43%), Postives = 130/185 (70.27%), Query Frame = 0


Query: 7   RRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGDQASIVG 66
           RRKRRR +  KN EEIENQRMTHIAVERNRRKQMNEYL++LR++MPSSY QRGDQASIVG
Sbjct: 95  RRKRRRTRNCKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVG 154

Query: 67  GTINFVKELEQLVQCLEAEK-QTHNFSSGRDSVNS---------------------AAEN 126
           G IN+VKELE ++Q +E ++ +TH+    + S +S                       E+
Sbjct: 155 GAINYVKELEHILQSMEPKRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPES 214

Query: 127 RAMTVDVEVTVIESYANIKMIAEKRPRQLLKVVVELHSLHLLVLHVNVTTIRETVLYCFS 170
            +   ++EVTV ES+ANIK++ +K+PRQLLK++  L SL L +LH+NVTT+  ++LY  S
Sbjct: 215 SSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSIS 274

[Close]

BLAST of MS012604 vs. ExPASy Swiss-Prot
Match: Q9C7T4 (Transcription factor bHLH96 OS=Arabidopsis thaliana OX=3702 GN=BHLH96 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.3e-39
Identity = 100/194 (51.55%), Postives = 129/194 (66.49%), Query Frame = 0


Query: 2   AAKRGRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGDQ 61
           AA  GRRKRRR +  KN EEIENQRMTHIAVERNRRKQMNEYL++LR++MP  Y QRGDQ
Sbjct: 100 AAGGGRRKRRRTRSSKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQ 159

Query: 62  ASIVGGTINFVKELEQLVQCLE--AEKQTHNFSSGRDSV--------------------- 121
           ASIVGG IN++KELE  +Q +E   +  T +  +G D                       
Sbjct: 160 ASIVGGAINYLKELEHHLQSMEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYS 219

Query: 122 ---NSAAENRAMTVDVEVTVIESYANIKMIAEKRPRQLLKVVVELHSLHLLVLHVNVTTI 170
               SAA    M  ++EVT++ES+A++K++A+KRPRQLLK+V  + SL L +LH+NVTT 
Sbjct: 220 NRPTSAAAAEGM-AEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTR 279

[Close]

BLAST of MS012604 vs. ExPASy Swiss-Prot
Match: Q56YJ8 (Transcription factor FAMA OS=Arabidopsis thaliana OX=3702 GN=FAMA PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-36
Identity = 91/201 (45.27%), Postives = 124/201 (61.69%), Query Frame = 0


Query: 4   KRGRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGDQAS 63
           K  + KR+R +  K SEE+E+QRMTHIAVERNRRKQMNE+L +LR++MP SY QRGDQAS
Sbjct: 174 KEVKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQAS 233

Query: 64  IVGGTINFVKELEQLVQCLEAEKQTHNF-SSGRDSVNS---------------------- 123
           I+GG I FV+ELEQL+QCLE++K+      +GRD   +                      
Sbjct: 234 IIGGAIEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITG 293

Query: 124 --------------AAENRAMTVDVEVTVIESYANIKMIAEKRPRQLLKVVVELHSLHLL 168
                          AEN++   DVEV ++   A IK+++ +RP QL+K +  L  LHL 
Sbjct: 294 NVTELEGGGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLS 353

[Close]

BLAST of MS012604 vs. ExPASy Swiss-Prot
Match: Q700E4 (Transcription factor bHLH67 OS=Arabidopsis thaliana OX=3702 GN=BHLH67 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.6e-32
Identity = 85/178 (47.75%), Postives = 121/178 (67.98%), Query Frame = 0


Query: 5   RGRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGDQASI 64
           R +RKRR+ K  KN+EEIENQR+ HIAVERNRR+QMNE+++ LR ++P SY QRGDQASI
Sbjct: 156 REKRKRRKTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASI 215

Query: 65  VGGTINFVKELEQLVQCLEAEKQTH------------NFSSGRDSVN--SAAENRAMTVD 124
           VGG IN+VK LEQ++Q LE++K+T             N  SG  S +  +  E++     
Sbjct: 216 VGGAINYVKVLEQIIQSLESQKRTQQQSNSEVVENALNHLSGISSNDLWTTLEDQTCIPK 275

Query: 125 VEVTVIESYANIKMIAEKRPRQLLKVVVELHSLHLLVLHVNVTT-IRETVLYCFSVKV 168
           +E TVI+++ ++K+  EK+  QLLK ++ L  L L VLH+N+TT    +V Y F++K+
Sbjct: 276 IEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKM 333

[Close]

BLAST of MS012604 vs. ExPASy Swiss-Prot
Match: Q9M128 (Transcription factor bHLH57 OS=Arabidopsis thaliana OX=3702 GN=BHLH57 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.8e-32
Identity = 82/186 (44.09%), Postives = 123/186 (66.13%), Query Frame = 0


Query: 7   RRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGDQASIVG 66
           +RKR+R +  KN +E+ENQRMTHIAVERNRR+QMNE+L+ LR++MP S+ QRGDQASIVG
Sbjct: 95  KRKRKRTRAPKNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVG 154

Query: 67  GTINFVKELEQLVQCLEAEKQTHN------------------FSSGRDSVNSAAEN---- 126
           G I+F+KELEQL+Q LEAEK+                      +S   SV++ +EN    
Sbjct: 155 GAIDFIKELEQLLQSLEAEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTA 214

Query: 127 ---RAMTVDVEVTVIESYANIKMIAEKRPRQLLKVVVELHSLHLLVLHVNVTTIRETVLY 168
                 T +VE TVI+++ ++K+  ++  RQ+LK +V +  L L +LH+ +++  + V+Y
Sbjct: 215 RFGGGDTTEVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIY 274

[Close]

BLAST of MS012604 vs. ExPASy TrEMBL
Match: A0A6J1C7H5 (transcription factor bHLH94-like OS=Momordica charantia OX=3673 GN=LOC111008122 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 6.0e-78
Identity = 162/167 (97.01%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 1   PAAKRGRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGD 60
           PAAKRGRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGD
Sbjct: 84  PAAKRGRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGD 143

Query: 61  QASIVGGTINFVKELEQLVQCLEAEKQTHNFSSGRDSVNSAAENRAMTVDVEVTVIESYA 120
           QASIVGGTINFVKELEQLVQCLEAEKQTHNF SGRDSVNSAAENRAMTVDVEVTVIESYA
Sbjct: 144 QASIVGGTINFVKELEQLVQCLEAEKQTHNFFSGRDSVNSAAENRAMTVDVEVTVIESYA 203

Query: 121 NIKMIAEKRPRQLLKVVVELHSLHLLVLHVNVTTIRETVLYCFSVKV 168
           NIKMIAEKRPRQLLKVVVELHSLHLLVLH+NVTTIRE VLY FSVK+
Sbjct: 204 NIKMIAEKRPRQLLKVVVELHSLHLLVLHINVTTIREMVLYYFSVKI 250

[Close]

BLAST of MS012604 vs. ExPASy TrEMBL
Match: A0A6J1KPK0 (transcription factor bHLH94-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495321 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 5.9e-49
Identity = 119/164 (72.56%), Postives = 129/164 (78.66%), Query Frame = 0


Query: 6   GRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGDQASIV 65
           G+R R RGKMVK  EEIE QRM HIAVERNRRKQMNEYL +LR+MMPSSYTQRGDQASIV
Sbjct: 53  GKRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIV 112

Query: 66  GGTINFVKELEQLVQCLEAEKQTHN--FSSGRDSVNSAAENRAMTVDVEVTVIESYANIK 125
           GGTI FVKELEQLVQ LE +KQ H     SG+DS  S          VEV VIESYANIK
Sbjct: 113 GGTIKFVKELEQLVQWLEGKKQRHERICYSGQDSGES---------KVEVRVIESYANIK 172

Query: 126 MIAEKRPRQLLKVVVELHSLHLLVLHVNVTTIRETVLYCFSVKV 168
           M AE RP+QLLKV +ELHSL LL+LHVNVTTIR+ V YCFSVK+
Sbjct: 173 MRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFSVKI 207

[Close]

BLAST of MS012604 vs. ExPASy TrEMBL
Match: A0A6J1KFT5 (transcription factor bHLH94-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495321 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 5.9e-49
Identity = 119/164 (72.56%), Postives = 129/164 (78.66%), Query Frame = 0


Query: 6   GRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGDQASIV 65
           G+R R RGKMVK  EEIE QRM HIAVERNRRKQMNEYL +LR+MMPSSYTQRGDQASIV
Sbjct: 17  GKRWRGRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIV 76

Query: 66  GGTINFVKELEQLVQCLEAEKQTHN--FSSGRDSVNSAAENRAMTVDVEVTVIESYANIK 125
           GGTI FVKELEQLVQ LE +KQ H     SG+DS  S          VEV VIESYANIK
Sbjct: 77  GGTIKFVKELEQLVQWLEGKKQRHERICYSGQDSGES---------KVEVRVIESYANIK 136

Query: 126 MIAEKRPRQLLKVVVELHSLHLLVLHVNVTTIRETVLYCFSVKV 168
           M AE RP+QLLKV +ELHSL LL+LHVNVTTIR+ V YCFSVK+
Sbjct: 137 MRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFSVKI 171

[Close]

BLAST of MS012604 vs. ExPASy TrEMBL
Match: A0A6J1FWL3 (transcription factor bHLH94-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448031 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.4e-47
Identity = 113/162 (69.75%), Postives = 128/162 (79.01%), Query Frame = 0


Query: 6   GRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGDQASIV 65
           G+R  RRGKMVK  EEIE QRM HIAVERNRRKQMNEYL +LR+MMPSSYTQRGDQASIV
Sbjct: 17  GKRWGRRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIV 76

Query: 66  GGTINFVKELEQLVQCLEAEKQTHNFSSGRDSVNSAAENRAMTVDVEVTVIESYANIKMI 125
           GGTI FVKELEQLVQ LE +KQ H      + +  + ++ +    VEV VIE YANIKM 
Sbjct: 77  GGTIKFVKELEQLVQWLEGKKQRH------EHICYSGQDYSGESKVEVRVIERYANIKMR 136

Query: 126 AEKRPRQLLKVVVELHSLHLLVLHVNVTTIRETVLYCFSVKV 168
           AE RP+QLLKV +ELHSL LL+LHVNVTTIR+ V YCFSVK+
Sbjct: 137 AENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFSVKI 172

[Close]

BLAST of MS012604 vs. ExPASy TrEMBL
Match: A0A6J1FSH7 (transcription factor bHLH94-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448031 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.4e-47
Identity = 113/162 (69.75%), Postives = 128/162 (79.01%), Query Frame = 0


Query: 6   GRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGDQASIV 65
           G+R  RRGKMVK  EEIE QRM HIAVERNRRKQMNEYL +LR+MMPSSYTQRGDQASIV
Sbjct: 44  GKRWGRRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIV 103

Query: 66  GGTINFVKELEQLVQCLEAEKQTHNFSSGRDSVNSAAENRAMTVDVEVTVIESYANIKMI 125
           GGTI FVKELEQLVQ LE +KQ H      + +  + ++ +    VEV VIE YANIKM 
Sbjct: 104 GGTIKFVKELEQLVQWLEGKKQRH------EHICYSGQDYSGESKVEVRVIERYANIKMR 163

Query: 126 AEKRPRQLLKVVVELHSLHLLVLHVNVTTIRETVLYCFSVKV 168
           AE RP+QLLKV +ELHSL LL+LHVNVTTIR+ V YCFSVK+
Sbjct: 164 AENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFSVKI 199

[Close]

BLAST of MS012604 vs. TAIR 10
Match: AT1G22490.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 171.4 bits (433), Expect = 6.2e-43
Identity = 97/185 (52.43%), Postives = 130/185 (70.27%), Query Frame = 0


Query: 7   RRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGDQASIVG 66
           RRKRRR +  KN EEIENQRMTHIAVERNRRKQMNEYL++LR++MPSSY QRGDQASIVG
Sbjct: 95  RRKRRRTRNCKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVG 154

Query: 67  GTINFVKELEQLVQCLEAEK-QTHNFSSGRDSVNS---------------------AAEN 126
           G IN+VKELE ++Q +E ++ +TH+    + S +S                       E+
Sbjct: 155 GAINYVKELEHILQSMEPKRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPES 214

Query: 127 RAMTVDVEVTVIESYANIKMIAEKRPRQLLKVVVELHSLHLLVLHVNVTTIRETVLYCFS 170
            +   ++EVTV ES+ANIK++ +K+PRQLLK++  L SL L +LH+NVTT+  ++LY  S
Sbjct: 215 SSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSIS 274

[Close]

BLAST of MS012604 vs. TAIR 10
Match: AT1G72210.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 162.2 bits (409), Expect = 3.8e-40
Identity = 100/194 (51.55%), Postives = 129/194 (66.49%), Query Frame = 0


Query: 2   AAKRGRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGDQ 61
           AA  GRRKRRR +  KN EEIENQRMTHIAVERNRRKQMNEYL++LR++MP  Y QRGDQ
Sbjct: 100 AAGGGRRKRRRTRSSKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQ 159

Query: 62  ASIVGGTINFVKELEQLVQCLE--AEKQTHNFSSGRDSV--------------------- 121
           ASIVGG IN++KELE  +Q +E   +  T +  +G D                       
Sbjct: 160 ASIVGGAINYLKELEHHLQSMEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYS 219

Query: 122 ---NSAAENRAMTVDVEVTVIESYANIKMIAEKRPRQLLKVVVELHSLHLLVLHVNVTTI 170
               SAA    M  ++EVT++ES+A++K++A+KRPRQLLK+V  + SL L +LH+NVTT 
Sbjct: 220 NRPTSAAAAEGM-AEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTR 279

[Close]

BLAST of MS012604 vs. TAIR 10
Match: AT3G24140.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 154.1 bits (388), Expect = 1.0e-37
Identity = 91/201 (45.27%), Postives = 124/201 (61.69%), Query Frame = 0


Query: 4   KRGRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGDQAS 63
           K  + KR+R +  K SEE+E+QRMTHIAVERNRRKQMNE+L +LR++MP SY QRGDQAS
Sbjct: 174 KEVKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQAS 233

Query: 64  IVGGTINFVKELEQLVQCLEAEKQTHNF-SSGRDSVNS---------------------- 123
           I+GG I FV+ELEQL+QCLE++K+      +GRD   +                      
Sbjct: 234 IIGGAIEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITG 293

Query: 124 --------------AAENRAMTVDVEVTVIESYANIKMIAEKRPRQLLKVVVELHSLHLL 168
                          AEN++   DVEV ++   A IK+++ +RP QL+K +  L  LHL 
Sbjct: 294 NVTELEGGGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLS 353

[Close]

BLAST of MS012604 vs. TAIR 10
Match: AT3G61950.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-33
Identity = 85/178 (47.75%), Postives = 121/178 (67.98%), Query Frame = 0


Query: 5   RGRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGDQASI 64
           R +RKRR+ K  KN+EEIENQR+ HIAVERNRR+QMNE+++ LR ++P SY QRGDQASI
Sbjct: 156 REKRKRRKTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASI 215

Query: 65  VGGTINFVKELEQLVQCLEAEKQTH------------NFSSGRDSVN--SAAENRAMTVD 124
           VGG IN+VK LEQ++Q LE++K+T             N  SG  S +  +  E++     
Sbjct: 216 VGGAINYVKVLEQIIQSLESQKRTQQQSNSEVVENALNHLSGISSNDLWTTLEDQTCIPK 275

Query: 125 VEVTVIESYANIKMIAEKRPRQLLKVVVELHSLHLLVLHVNVTT-IRETVLYCFSVKV 168
           +E TVI+++ ++K+  EK+  QLLK ++ L  L L VLH+N+TT    +V Y F++K+
Sbjct: 276 IEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKM 333

[Close]

BLAST of MS012604 vs. TAIR 10
Match: AT3G61950.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-33
Identity = 85/178 (47.75%), Postives = 121/178 (67.98%), Query Frame = 0


Query: 5   RGRRKRRRGKMVKNSEEIENQRMTHIAVERNRRKQMNEYLSMLRTMMPSSYTQRGDQASI 64
           R +RKRR+ K  KN+EEIENQR+ HIAVERNRR+QMNE+++ LR ++P SY QRGDQASI
Sbjct: 105 REKRKRRKTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASI 164

Query: 65  VGGTINFVKELEQLVQCLEAEKQTH------------NFSSGRDSVN--SAAENRAMTVD 124
           VGG IN+VK LEQ++Q LE++K+T             N  SG  S +  +  E++     
Sbjct: 165 VGGAINYVKVLEQIIQSLESQKRTQQQSNSEVVENALNHLSGISSNDLWTTLEDQTCIPK 224

Query: 125 VEVTVIESYANIKMIAEKRPRQLLKVVVELHSLHLLVLHVNVTT-IRETVLYCFSVKV 168
           +E TVI+++ ++K+  EK+  QLLK ++ L  L L VLH+N+TT    +V Y F++K+
Sbjct: 225 IEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKM 282

The following BLAST results are available for this feature:

BLAST of MS012604 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136403.1	1.2e-77	97.01	transcription factor bHLH94-like [Momordica charantia]	[more]
XP_023001108.1	1.2e-48	72.56	transcription factor bHLH94-like isoform X1 [Cucurbita maxima]	[more]
XP_023001192.1	1.2e-48	72.56	transcription factor bHLH94-like isoform X2 [Cucurbita maxima]	[more]
KAG7031312.1	3.0e-47	69.75	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022943243.1	3.0e-47	69.75	transcription factor bHLH94-like isoform X2 [Cucurbita moschata]	[more]

BLAST of MS012604 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SK91	8.7e-42	52.43	Transcription factor bHLH94 OS=Arabidopsis thaliana OX=3702 GN=BHLH94 PE=1 SV=2	[more]
Q9C7T4	5.3e-39	51.55	Transcription factor bHLH96 OS=Arabidopsis thaliana OX=3702 GN=BHLH96 PE=1 SV=1	[more]
Q56YJ8	1.4e-36	45.27	Transcription factor FAMA OS=Arabidopsis thaliana OX=3702 GN=FAMA PE=1 SV=1	[more]
Q700E4	1.6e-32	47.75	Transcription factor bHLH67 OS=Arabidopsis thaliana OX=3702 GN=BHLH67 PE=2 SV=1	[more]
Q9M128	2.8e-32	44.09	Transcription factor bHLH57 OS=Arabidopsis thaliana OX=3702 GN=BHLH57 PE=1 SV=1	[more]

BLAST of MS012604 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C7H5	6.0e-78	97.01	transcription factor bHLH94-like OS=Momordica charantia OX=3673 GN=LOC111008122 ...	[more]
A0A6J1KPK0	5.9e-49	72.56	transcription factor bHLH94-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1KFT5	5.9e-49	72.56	transcription factor bHLH94-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1FWL3	1.4e-47	69.75	transcription factor bHLH94-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1FSH7	1.4e-47	69.75	transcription factor bHLH94-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of MS012604 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22490.1	6.2e-43	52.43	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G72210.1	3.8e-40	51.55	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G24140.1	1.0e-37	45.27	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G61950.1	1.2e-33	47.75	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G61950.2	1.2e-33	47.75	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 72..92
None	No IPR available	PANTHER	PTHR11969	MAX DIMERIZATION, MAD	coord: 4..94
None	No IPR available	PANTHER	PTHR11969:SF26	HELIX-LOOP-HELIX-LIKE PROTEIN	coord: 98..168
None	No IPR available	PANTHER	PTHR11969:SF26	HELIX-LOOP-HELIX-LIKE PROTEIN	coord: 4..94
None	No IPR available	PANTHER	PTHR11969	MAX DIMERIZATION, MAD	coord: 98..168
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 30..81 e-value: 3.8E-9 score: 46.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 25..76 e-value: 1.0E-10 score: 41.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 24..75 score: 14.805142
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 15..90 e-value: 9.7E-14 score: 53.0
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 24..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012604.1	MS012604.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity