MS012590 (gene) Bitter gourd (TR) v1

Overview
NameMS012590
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Locationscaffold63: 1847979 .. 1848581 (-)
RNA-Seq ExpressionMS012590
SyntenyMS012590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGTCGACTAATAATAATATTCCTGAAAAGAGAAAGCCGGCTCCGACCACGGCGCATGCACAAGATCACGTCCTCGCCGAGAGGAAACGCCGGGAGAAACTCAGCCAGCGATTCATCGCTCTTTCTGCCCTTTTACCCGGCCTTAAGAAGGTAAGGCCCATTTTAAACATGATTAAATTATCAATAAATCTAAAAGCTCAAGCTAAGAGGCAATTGATTATTTTTTGTGAACAGATGGACAAAGCCTCGGTTCTTGGAGATGCAATAAAGTACATAAAACAAGTAGAAGAAAGAGTGAGAGTGCTGGAGGAAAAGGCAAAGAAGAGAAGCATTGAATCTGCCATTTTGGTTAACAAATCCCATTTATATAATGACTGTGATGAGGAAATTAGTAGGTTTTCCGACCAAAAACAGCTGCCGGAAATCGAGGCAAGAATCTCAGACGACAAGAATAATGTTCTTGTTCGAATCCACTGTGAGAAAAATGAGGGTTTGTTCGCAAAGTTATTGGGGGAAATGGAGAAGATGAATCTCACCATCGTTAATGCCAATTTCTTCCCCTTTGGCCCTTCAACTCAATATATGGTTCTTGTCGCTCAGGTA

mRNA sequence

CCGTCGACTAATAATAATATTCCTGAAAAGAGAAAGCCGGCTCCGACCACGGCGCATGCACAAGATCACGTCCTCGCCGAGAGGAAACGCCGGGAGAAACTCAGCCAGCGATTCATCGCTCTTTCTGCCCTTTTACCCGGCCTTAAGAAGATGGACAAAGCCTCGGTTCTTGGAGATGCAATAAAGTACATAAAACAAGTAGAAGAAAGAGTGAGAGTGCTGGAGGAAAAGGCAAAGAAGAGAAGCATTGAATCTGCCATTTTGGTTAACAAATCCCATTTATATAATGACTGTGATGAGGAAATTAGTAGGTTTTCCGACCAAAAACAGCTGCCGGAAATCGAGGCAAGAATCTCAGACGACAAGAATAATGTTCTTGTTCGAATCCACTGTGAGAAAAATGAGGGTTTGTTCGCAAAGTTATTGGGGGAAATGGAGAAGATGAATCTCACCATCGTTAATGCCAATTTCTTCCCCTTTGGCCCTTCAACTCAATATATGGTTCTTGTCGCTCAGGTA

Coding sequence (CDS)

CCGTCGACTAATAATAATATTCCTGAAAAGAGAAAGCCGGCTCCGACCACGGCGCATGCACAAGATCACGTCCTCGCCGAGAGGAAACGCCGGGAGAAACTCAGCCAGCGATTCATCGCTCTTTCTGCCCTTTTACCCGGCCTTAAGAAGATGGACAAAGCCTCGGTTCTTGGAGATGCAATAAAGTACATAAAACAAGTAGAAGAAAGAGTGAGAGTGCTGGAGGAAAAGGCAAAGAAGAGAAGCATTGAATCTGCCATTTTGGTTAACAAATCCCATTTATATAATGACTGTGATGAGGAAATTAGTAGGTTTTCCGACCAAAAACAGCTGCCGGAAATCGAGGCAAGAATCTCAGACGACAAGAATAATGTTCTTGTTCGAATCCACTGTGAGAAAAATGAGGGTTTGTTCGCAAAGTTATTGGGGGAAATGGAGAAGATGAATCTCACCATCGTTAATGCCAATTTCTTCCCCTTTGGCCCTTCAACTCAATATATGGTTCTTGTCGCTCAGGTA

Protein sequence

PSTNNNIPEKRKPAPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDAIKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISDDKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGPSTQYMVLVAQV
Homology
BLAST of MS012590 vs. NCBI nr
Match: XP_022136753.1 (transcription factor bHLH18-like isoform X3 [Momordica charantia])

HSP 1 Score: 325.1 bits (832), Expect = 3.7e-85
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0

Query: 1   PSTNNNIPEKRKPAPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 60
           PS NNNIPEKRKP PTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA
Sbjct: 42  PSINNNIPEKRKPTPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 101

Query: 61  IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 120
           IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD
Sbjct: 102 IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 161

Query: 121 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGPSTQYMVLVAQV 174
           DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFG STQYMVLVAQV
Sbjct: 162 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGTSTQYMVLVAQV 214

BLAST of MS012590 vs. NCBI nr
Match: XP_022136751.1 (transcription factor bHLH18-like isoform X1 [Momordica charantia])

HSP 1 Score: 324.7 bits (831), Expect = 4.8e-85
Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 0

Query: 1   PSTNNNIPEKRKPAPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 60
           PS NNNIPEKRKP PTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA
Sbjct: 42  PSINNNIPEKRKPTPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 101

Query: 61  IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 120
           IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD
Sbjct: 102 IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 161

Query: 121 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGPSTQYMVLVAQV 174
           DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFG STQYMVLVAQ+
Sbjct: 162 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGTSTQYMVLVAQI 214

BLAST of MS012590 vs. NCBI nr
Match: XP_022136754.1 (transcription factor bHLH18-like isoform X4 [Momordica charantia])

HSP 1 Score: 324.7 bits (831), Expect = 4.8e-85
Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 0

Query: 1   PSTNNNIPEKRKPAPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 60
           PS NNNIPEKRKP PTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA
Sbjct: 42  PSINNNIPEKRKPTPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 101

Query: 61  IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 120
           IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD
Sbjct: 102 IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 161

Query: 121 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGPSTQYMVLVAQV 174
           DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFG STQYMVLVAQ+
Sbjct: 162 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGTSTQYMVLVAQI 214

BLAST of MS012590 vs. NCBI nr
Match: XP_022136755.1 (transcription factor bHLH18-like isoform X5 [Momordica charantia])

HSP 1 Score: 323.6 bits (828), Expect = 1.1e-84
Identity = 169/172 (98.26%), Postives = 169/172 (98.26%), Query Frame = 0

Query: 1   PSTNNNIPEKRKPAPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 60
           PS NNNIPEKRKP PTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA
Sbjct: 42  PSINNNIPEKRKPTPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 101

Query: 61  IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 120
           IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD
Sbjct: 102 IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 161

Query: 121 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGPSTQYMVLVAQ 173
           DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFG STQYMVLVAQ
Sbjct: 162 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGTSTQYMVLVAQ 213

BLAST of MS012590 vs. NCBI nr
Match: XP_022136752.1 (transcription factor bHLH18-like isoform X2 [Momordica charantia])

HSP 1 Score: 323.6 bits (828), Expect = 1.1e-84
Identity = 169/172 (98.26%), Postives = 169/172 (98.26%), Query Frame = 0

Query: 1   PSTNNNIPEKRKPAPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 60
           PS NNNIPEKRKP PTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA
Sbjct: 42  PSINNNIPEKRKPTPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 101

Query: 61  IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 120
           IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD
Sbjct: 102 IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 161

Query: 121 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGPSTQYMVLVAQ 173
           DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFG STQYMVLVAQ
Sbjct: 162 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGTSTQYMVLVAQ 213

BLAST of MS012590 vs. ExPASy Swiss-Prot
Match: Q1PF17 (Transcription factor bHLH18 OS=Arabidopsis thaliana OX=3702 GN=BHLH18 PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-36
Identity = 84/160 (52.50%), Postives = 116/160 (72.50%), Query Frame = 0

Query: 18  AHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDAIKYIKQVEERVRVLEEK 77
           ++AQDH+LAERKRREKL+QRF+ALSAL+PGLKKMDKASVLGDAIK+IK ++E V+  EE+
Sbjct: 122 SNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQ 181

Query: 78  AKKRSIESAILVNKSHLYNDCDEEIS--------RFSDQKQLPEIEARISDDKNNVLVRI 137
            K++++ES +LV KS L  D + + S        R S    LPEIE R+S    +VL++I
Sbjct: 182 KKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSG--KDVLIKI 241

Query: 138 HCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGPSTQYMVL 170
            CEK +G   K++GE+EK+ L+I N+N  PFGP+    ++
Sbjct: 242 LCEKQKGNVIKIMGEIEKLGLSITNSNVLPFGPTFDISII 279

BLAST of MS012590 vs. ExPASy Swiss-Prot
Match: Q9T072 (Transcription factor bHLH25 OS=Arabidopsis thaliana OX=3702 GN=BHLH25 PE=2 SV=2)

HSP 1 Score: 149.4 bits (376), Expect = 3.6e-35
Identity = 83/158 (52.53%), Postives = 116/158 (73.42%), Query Frame = 0

Query: 18  AHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDAIKYIKQVEERVRVLEEK 77
           ++AQDH++AERKRREKL+QRF+ALSAL+PGLKKMDKASVLGDA+K+IK ++ERV  LEE+
Sbjct: 148 SNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQ 207

Query: 78  AKKRSIESAILVNKSHLYNDCDEEI------SRFSDQKQLPEIEARISDDKNNVLVRIHC 137
            K+R +ES +LV KS L  D + +         FSD   LPEIE R SD+  +VL++I C
Sbjct: 208 KKERRLESMVLVKKSKLILDDNNQSFSSSCEDGFSD-LDLPEIEVRFSDE--DVLIKILC 267

Query: 138 EKNEGLFAKLLGEMEKMNLTIVNANFFPFGPSTQYMVL 170
           EK +G  AK++ E+EK+++ I N++   FGP+    ++
Sbjct: 268 EKQKGHLAKIMAEIEKLHILITNSSVLNFGPTLDITII 302

BLAST of MS012590 vs. ExPASy Swiss-Prot
Match: Q8S3F1 (Transcription factor NAI1 OS=Arabidopsis thaliana OX=3702 GN=NAI1 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.2e-31
Identity = 80/171 (46.78%), Postives = 115/171 (67.25%), Query Frame = 0

Query: 21  QDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDAIKYIKQVEERVRVLEEK--A 80
           ++HVLAERKRR+KL++R IALSALLPGLKK DKA+VL DAIK++KQ++ERV+ LEE+   
Sbjct: 131 KEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVV 190

Query: 81  KKRSIESAILVNKSHLYNDCDEE-----------ISRFSDQ-----KQLPEIEARISDDK 140
            K+  +S ILV +S +Y D D             +S  SD+     + +P IEAR+SD  
Sbjct: 191 TKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIEARVSD-- 250

Query: 141 NNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGPSTQYMVLVAQV 174
            ++L+R+HCEKN+G   K+L  +EK  L +VN+   PFG ST  + ++ ++
Sbjct: 251 RDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNSTLVITILTKM 299

BLAST of MS012590 vs. ExPASy Swiss-Prot
Match: Q1PF16 (Transcription factor bHLH19 OS=Arabidopsis thaliana OX=3702 GN=BHLH19 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.7e-30
Identity = 79/160 (49.38%), Postives = 110/160 (68.75%), Query Frame = 0

Query: 20  AQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDAIKYIKQVEERVRVL-EEKA 79
           A++HVLAERKRREKLS++FIALSALLPGLKK DK ++L DAI  +KQ++E++R L EEK 
Sbjct: 117 AKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKE 176

Query: 80  KKRSIESAILVNKSHLYNDCDEEIS-----RFSDQKQLPEIEARISDDKNNVLVRIHCEK 139
             R +ES ILV KS ++ D +  +S          + LPEIEA+IS  +N++L+RI CEK
Sbjct: 177 ATRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAKIS--QNDILIRILCEK 236

Query: 140 NEGLFAKLLGEMEKMNLTIVNANFFPFGPSTQYMVLVAQV 174
           ++G    +L  +E   L I N+   PFG ST  + ++AQ+
Sbjct: 237 SKGCMINILNTIENFQLRIENSIVLPFGDSTLDITVLAQM 274

BLAST of MS012590 vs. ExPASy Swiss-Prot
Match: Q9LNJ5 (Transcription factor bHLH13 OS=Arabidopsis thaliana OX=3702 GN=BHLH13 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-13
Identity = 52/156 (33.33%), Postives = 84/156 (53.85%), Query Frame = 0

Query: 3   TNNNIPEK--RKPAPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 62
           + NN P K  R+PA   A A +HV AER+RREKL+QRF AL +++P + KMDKAS+LGDA
Sbjct: 412 SGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDA 471

Query: 63  IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 122
           + YI ++  +++V+E + ++    S             +  IS  SD          +  
Sbjct: 472 VSYINELHAKLKVMEAERERLGYSS-------------NPPISLDSD--------INVQT 531

Query: 123 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNAN 157
              +V VRI+C       +++    E+  + ++N+N
Sbjct: 532 SGEDVTVRINCPLESHPASRIFHAFEESKVEVINSN 546

BLAST of MS012590 vs. ExPASy TrEMBL
Match: A0A6J1C8F2 (transcription factor bHLH18-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111008381 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.8e-85
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0

Query: 1   PSTNNNIPEKRKPAPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 60
           PS NNNIPEKRKP PTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA
Sbjct: 42  PSINNNIPEKRKPTPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 101

Query: 61  IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 120
           IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD
Sbjct: 102 IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 161

Query: 121 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGPSTQYMVLVAQV 174
           DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFG STQYMVLVAQV
Sbjct: 162 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGTSTQYMVLVAQV 214

BLAST of MS012590 vs. ExPASy TrEMBL
Match: A0A6J1C4D8 (transcription factor bHLH18-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008381 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.3e-85
Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 0

Query: 1   PSTNNNIPEKRKPAPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 60
           PS NNNIPEKRKP PTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA
Sbjct: 42  PSINNNIPEKRKPTPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 101

Query: 61  IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 120
           IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD
Sbjct: 102 IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 161

Query: 121 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGPSTQYMVLVAQV 174
           DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFG STQYMVLVAQ+
Sbjct: 162 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGTSTQYMVLVAQI 214

BLAST of MS012590 vs. ExPASy TrEMBL
Match: A0A6J1C590 (transcription factor bHLH18-like isoform X4 OS=Momordica charantia OX=3673 GN=LOC111008381 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.3e-85
Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 0

Query: 1   PSTNNNIPEKRKPAPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 60
           PS NNNIPEKRKP PTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA
Sbjct: 42  PSINNNIPEKRKPTPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 101

Query: 61  IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 120
           IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD
Sbjct: 102 IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 161

Query: 121 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGPSTQYMVLVAQV 174
           DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFG STQYMVLVAQ+
Sbjct: 162 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGTSTQYMVLVAQI 214

BLAST of MS012590 vs. ExPASy TrEMBL
Match: A0A6J1C4V4 (transcription factor bHLH18-like isoform X5 OS=Momordica charantia OX=3673 GN=LOC111008381 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.2e-85
Identity = 169/172 (98.26%), Postives = 169/172 (98.26%), Query Frame = 0

Query: 1   PSTNNNIPEKRKPAPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 60
           PS NNNIPEKRKP PTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA
Sbjct: 42  PSINNNIPEKRKPTPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 101

Query: 61  IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 120
           IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD
Sbjct: 102 IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 161

Query: 121 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGPSTQYMVLVAQ 173
           DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFG STQYMVLVAQ
Sbjct: 162 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGTSTQYMVLVAQ 213

BLAST of MS012590 vs. ExPASy TrEMBL
Match: A0A6J1C6B6 (transcription factor bHLH18-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008381 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 5.2e-85
Identity = 169/172 (98.26%), Postives = 169/172 (98.26%), Query Frame = 0

Query: 1   PSTNNNIPEKRKPAPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 60
           PS NNNIPEKRKP PTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA
Sbjct: 42  PSINNNIPEKRKPTPTTAHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDA 101

Query: 61  IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 120
           IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD
Sbjct: 102 IKYIKQVEERVRVLEEKAKKRSIESAILVNKSHLYNDCDEEISRFSDQKQLPEIEARISD 161

Query: 121 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGPSTQYMVLVAQ 173
           DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFG STQYMVLVAQ
Sbjct: 162 DKNNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGTSTQYMVLVAQ 213

BLAST of MS012590 vs. TAIR 10
Match: AT2G22750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 154.5 bits (389), Expect = 8.0e-38
Identity = 84/160 (52.50%), Postives = 116/160 (72.50%), Query Frame = 0

Query: 18  AHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDAIKYIKQVEERVRVLEEK 77
           ++AQDH+LAERKRREKL+QRF+ALSAL+PGLKKMDKASVLGDAIK+IK ++E V+  EE+
Sbjct: 122 SNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQ 181

Query: 78  AKKRSIESAILVNKSHLYNDCDEEIS--------RFSDQKQLPEIEARISDDKNNVLVRI 137
            K++++ES +LV KS L  D + + S        R S    LPEIE R+S    +VL++I
Sbjct: 182 KKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSG--KDVLIKI 241

Query: 138 HCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGPSTQYMVL 170
            CEK +G   K++GE+EK+ L+I N+N  PFGP+    ++
Sbjct: 242 LCEKQKGNVIKIMGEIEKLGLSITNSNVLPFGPTFDISII 279

BLAST of MS012590 vs. TAIR 10
Match: AT2G22750.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 154.5 bits (389), Expect = 8.0e-38
Identity = 84/160 (52.50%), Postives = 116/160 (72.50%), Query Frame = 0

Query: 18  AHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDAIKYIKQVEERVRVLEEK 77
           ++AQDH+LAERKRREKL+QRF+ALSAL+PGLKKMDKASVLGDAIK+IK ++E V+  EE+
Sbjct: 122 SNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQ 181

Query: 78  AKKRSIESAILVNKSHLYNDCDEEIS--------RFSDQKQLPEIEARISDDKNNVLVRI 137
            K++++ES +LV KS L  D + + S        R S    LPEIE R+S    +VL++I
Sbjct: 182 KKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSG--KDVLIKI 241

Query: 138 HCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGPSTQYMVL 170
            CEK +G   K++GE+EK+ L+I N+N  PFGP+    ++
Sbjct: 242 LCEKQKGNVIKIMGEIEKLGLSITNSNVLPFGPTFDISII 279

BLAST of MS012590 vs. TAIR 10
Match: AT4G37850.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 149.4 bits (376), Expect = 2.6e-36
Identity = 83/158 (52.53%), Postives = 116/158 (73.42%), Query Frame = 0

Query: 18  AHAQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDAIKYIKQVEERVRVLEEK 77
           ++AQDH++AERKRREKL+QRF+ALSAL+PGLKKMDKASVLGDA+K+IK ++ERV  LEE+
Sbjct: 148 SNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQ 207

Query: 78  AKKRSIESAILVNKSHLYNDCDEEI------SRFSDQKQLPEIEARISDDKNNVLVRIHC 137
            K+R +ES +LV KS L  D + +         FSD   LPEIE R SD+  +VL++I C
Sbjct: 208 KKERRLESMVLVKKSKLILDDNNQSFSSSCEDGFSD-LDLPEIEVRFSDE--DVLIKILC 267

Query: 138 EKNEGLFAKLLGEMEKMNLTIVNANFFPFGPSTQYMVL 170
           EK +G  AK++ E+EK+++ I N++   FGP+    ++
Sbjct: 268 EKQKGHLAKIMAEIEKLHILITNSSVLNFGPTLDITII 302

BLAST of MS012590 vs. TAIR 10
Match: AT2G22770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 3.0e-32
Identity = 80/171 (46.78%), Postives = 115/171 (67.25%), Query Frame = 0

Query: 21  QDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDAIKYIKQVEERVRVLEEK--A 80
           ++HVLAERKRR+KL++R IALSALLPGLKK DKA+VL DAIK++KQ++ERV+ LEE+   
Sbjct: 131 KEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVV 190

Query: 81  KKRSIESAILVNKSHLYNDCDEE-----------ISRFSDQ-----KQLPEIEARISDDK 140
            K+  +S ILV +S +Y D D             +S  SD+     + +P IEAR+SD  
Sbjct: 191 TKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIEARVSD-- 250

Query: 141 NNVLVRIHCEKNEGLFAKLLGEMEKMNLTIVNANFFPFGPSTQYMVLVAQV 174
            ++L+R+HCEKN+G   K+L  +EK  L +VN+   PFG ST  + ++ ++
Sbjct: 251 RDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNSTLVITILTKM 299

BLAST of MS012590 vs. TAIR 10
Match: AT2G22760.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 1.9e-31
Identity = 79/160 (49.38%), Postives = 110/160 (68.75%), Query Frame = 0

Query: 20  AQDHVLAERKRREKLSQRFIALSALLPGLKKMDKASVLGDAIKYIKQVEERVRVL-EEKA 79
           A++HVLAERKRREKLS++FIALSALLPGLKK DK ++L DAI  +KQ++E++R L EEK 
Sbjct: 117 AKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKE 176

Query: 80  KKRSIESAILVNKSHLYNDCDEEIS-----RFSDQKQLPEIEARISDDKNNVLVRIHCEK 139
             R +ES ILV KS ++ D +  +S          + LPEIEA+IS  +N++L+RI CEK
Sbjct: 177 ATRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAKIS--QNDILIRILCEK 236

Query: 140 NEGLFAKLLGEMEKMNLTIVNANFFPFGPSTQYMVLVAQV 174
           ++G    +L  +E   L I N+   PFG ST  + ++AQ+
Sbjct: 237 SKGCMINILNTIENFQLRIENSIVLPFGDSTLDITVLAQM 274

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022136753.13.7e-8598.27transcription factor bHLH18-like isoform X3 [Momordica charantia][more]
XP_022136751.14.8e-8597.69transcription factor bHLH18-like isoform X1 [Momordica charantia][more]
XP_022136754.14.8e-8597.69transcription factor bHLH18-like isoform X4 [Momordica charantia][more]
XP_022136755.11.1e-8498.26transcription factor bHLH18-like isoform X5 [Momordica charantia][more]
XP_022136752.11.1e-8498.26transcription factor bHLH18-like isoform X2 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Q1PF171.1e-3652.50Transcription factor bHLH18 OS=Arabidopsis thaliana OX=3702 GN=BHLH18 PE=1 SV=1[more]
Q9T0723.6e-3552.53Transcription factor bHLH25 OS=Arabidopsis thaliana OX=3702 GN=BHLH25 PE=2 SV=2[more]
Q8S3F14.2e-3146.78Transcription factor NAI1 OS=Arabidopsis thaliana OX=3702 GN=NAI1 PE=2 SV=1[more]
Q1PF162.7e-3049.38Transcription factor bHLH19 OS=Arabidopsis thaliana OX=3702 GN=BHLH19 PE=1 SV=1[more]
Q9LNJ51.8e-1333.33Transcription factor bHLH13 OS=Arabidopsis thaliana OX=3702 GN=BHLH13 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1C8F21.8e-8598.27transcription factor bHLH18-like isoform X3 OS=Momordica charantia OX=3673 GN=LO... [more]
A0A6J1C4D82.3e-8597.69transcription factor bHLH18-like isoform X1 OS=Momordica charantia OX=3673 GN=LO... [more]
A0A6J1C5902.3e-8597.69transcription factor bHLH18-like isoform X4 OS=Momordica charantia OX=3673 GN=LO... [more]
A0A6J1C4V45.2e-8598.26transcription factor bHLH18-like isoform X5 OS=Momordica charantia OX=3673 GN=LO... [more]
A0A6J1C6B65.2e-8598.26transcription factor bHLH18-like isoform X2 OS=Momordica charantia OX=3673 GN=LO... [more]
Match NameE-valueIdentityDescription
AT2G22750.18.0e-3852.50basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
AT2G22750.28.0e-3852.50basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
AT4G37850.12.6e-3652.53basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
AT2G22770.13.0e-3246.78basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
AT2G22760.11.9e-3149.38basic helix-loop-helix (bHLH) DNA-binding superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 57..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR45959:SF36TRANSCRIPTION FACTOR NAI1coord: 10..173
NoneNo IPR availablePANTHERPTHR45959BHLH TRANSCRIPTION FACTORcoord: 10..173
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 24..73
e-value: 1.8E-13
score: 60.7
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 23..67
e-value: 5.9E-10
score: 39.0
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 18..67
score: 15.256057
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 10..82
e-value: 1.6E-15
score: 58.7
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 23..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS012590.1MS012590.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity