MS012552 (gene) Bitter gourd (TR) v1

Overview


Name	MS012552
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	GYF domain-containing protein
Location	scaffold63: 1500148 .. 1503853 (+)
RNA-Seq Expression	MS012552
Synteny	MS012552

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAAAGACTTCTACTTCAAAAGTCATCAGAACAAGCACGGTTGATAAATGAACTTCCAAAAGTGATAGCAGATATTCCTGAACCCACATTTGATGATTTATTAGAGAGGGATGAACAAGTAAGTCATAAGCATGAAGCACAACCGCCCATATGGGGTTTACAGCACAAGGCCCTGGTTGATACAAGAGACGACGGAAAAGATGTCACAGGTTACTGGCCTTTGTCTTAATTACTTGATTTTTTTTTTTTTGGATCTTGCTCTTTGCTTATAATTATTTGAATAATTCATGTTCAGATGTTCTCTTTTACCTTTGAAAAAGTACTCACTTTTGGATGTCTCTTCTATACTAGTTGCGACATTGAATTTAAGAGCCATTGATCCATTAAATTTAGTTTGTCCCGTATCATGATCCATTTAATTTATGAGCCAGGCCGTAGCTTGTTTTCTACCTTTGATGATTTATTAGAGAGGGATGAACAAGTAAGTCATAAGCATGAAGGACAACTGCCCATATGGGGTTTACAGCACAAGGCCGTGGTTGATACAAGAGATGACAGAAAAGATGTCAGAGGTTAGTGGCCTTTGTCTTAATTACTTGATTTTTTTTGGAACTTGCTCTTTGCTTATAATTGTTTTAATAATTGATGTTCAGATGTTCTCTTTTACCTTTGAAAAAGTACTCACTTTTGGATGTCTCTTCTATCCTAGTTGCTACATTGAATTTAAGAGCCATTGATCCGTTAAATTTAGTTTGTCCGATATCATGATCCATTGAAGTTATGAGCCAGGCCGTAGCTTGTTTTCTACCTTCCAAGTTGTATGTGTCTTTTCTATCCTTACTTCTTAGTGCTGCCTGTGTAGGTCGTACCGTTAAGATAACCATACATCCCCCTTCTCATAGTGAACATCTTCATTTATTGTTTCCTTTAGAGGTAGTTCAATCCTTTGAACATGTGGGTTGTAATTTGGAGGCTAAGTTACCTTGATAGGTGACTGATTTTTGAGACATATTTTTCAGTTTTCTCTTTCACTTACCTCCTTAAACTGACTGGTAGAACATAAGGAGCTATTGGGGCTTTCTTTTAGTGTTGATCAGGCTTGAGTCCCGGGTTGTTTCCTGAATCTGCAGCAGCTGGGTCTTAGTGTTGGTTGGGTTTCTGTTTAAGGGTGCAGCTGCTGGTGGTTTTAGTTTGCCAAAGAATTTAGTTGACTCTGATTTGACGGACAGGGAAAAATTCTCATTCAATTTAATAATCTGATGGAAAATACTTTTATGTTCTACCTAAAGTACTGAGATATCCTAGATACAGAAGGAAAGTGAAAATATCGTACCTATCTAATAACATATACAAGAGATATAACCACTCAATTACGACCATGGTAGATGGTATTCTTTAAAGAGGCGGCCCAACCCCATGGGTTGCCAAGGAGTATTTTCTCCTCTAGGGGCCGACTCTTTTATTAGCTTTTTCTAGGCTAAACCCTTCAGCTTCATGGAACTTACCTTAAGGGAAGTACAACCTATGCTCCTAAACTGATGAATAGAGTGAGGCAGCTAACTGGTGCCTAAGGCTAATATATTTCTTTTGGGTAGGACAGTGGGTATATCTCAAATTACAAGCATACCGGCACCAACCGATAGCTAAAAGAGTCAATAAGTTCACCCACGCTATTATGGGCGCCCTTTGAAATTGATACAAAGGTAGGGCCAGCTGGTTATAAATTGAAACTTCCGCCTCTTCTAAGATCCATCAGTTGTCCGCGTTTCAAAGTTGCCCAGGTCAGAGGGGACAGACCTGCAAAGCTTTAACCCCTACCTTCATCGACCTCTTTAATACCTACAATGGGAATGGACACAGAACCAAGATGCATTGTTGGTGCATGAATCAGCCTCTTTAAGAAAAACGATCTTGAGGTATCTATTTGGGGGCATGGATTTTAAAGAACCTAGCAACATTCCTACTCAAATTTCTCATCTCCCCTTTCAGACTAGGTGGATATTTGGCGCAGAGTATTGATAAACATAAACCGCAATTATATATAACTTATTCGTGTAAGAGTGTGGATGATGTAAAGGGAACATTAGGGGGACTTGGCTATTATGGGCAGTTTTTGGTATTGTTGAAGATTCTGCTTAGGCGAGGGAGAAGCATGCGAAAGGGAAGTAAGTTTTTTGGGGCAGAGGAATAAAGTAAAGGCAAGATAGCGGAGTTCGTAAGTTTCTCGGGGAGACAATAAGAAAACCTCACATCAAGTAGTGAAATAGGGCTCTCATATTTTCTCTTCTACTATTTGAGTTCAGTGAATAAGAATTTGTCCTTGAGACTGTCAGAAAGTATAAAAATTGGAAGATTAGTTATTTTTCCCCACCACAAAGCCAAAAGAGATCATAAATAAGTTCTCAGATGGATTGGCATTATAGAAATGAGAGTAATTGCTTAACCCTTAGACAATCAGCTCCATCTAAAGCTTCAAATAATTTAGAGGGAGTACACTTTACACTTGGTATTCAGAGCCCAGTTAATTCCTCTCAAGCCATAGAACCAAGAAGTTGTGATCAAGACTCCGAATTCAAAGGGATGTCCTGTCAATAGTTACATCAGAGTGCTTTGAGTATTCTTCTGGTAGCAGTTAGCAACCATTTCATCTCAAACTAGCTGAAAGTGGTGCAACTATTTTCATGTTAAAAGTCAAAAAATTAACTTCAAATCGTTGAATGCTATTTATATAATTTTTAATTTAATAGTCTTTAATGTTCAACAATTAGTTCAGTTCAAGAGCTTCAGTGAATCTAGAAATACTTTTAATTCATTATTTTCATTTGTGCAATTCATATATGATAAAAATAATAATAATCATAATCAAGAGTCTCCAAAATACCCATCTCGAGACCATCACAGAGGATGGTCAATGAATTACAGAAGGCAGGCCTCAAATGCAACTGAACTGTTTCCCTTGGATCATGTTCCAACATTGTTGAGTCACATATACATAAAATTTCTTCAGAGAGATTTACATTGATATTGTATGCTTGTTCGAGAGCCAGAATAGCCTCCCTTTGACTTCAAATGCATATTTATCAGAAAGGTTCTAATTAGCATCAAGCATCAAAATTTTAGCTCAACTGTTTTGAAGTGGTTAATTTAAGAAAGTATGTTTGTTTTATATTCTGACTTGATCCTCAGCTGTTGAGGTAGAAGAATGTCAGGTTGGTGTCCCAACTATCTCAGAGAAGCAGCAACACTTTGATGTGCCCACTTGTAAAGATTTTGCTAAAAAATCTTGTATATCAGCTGCAAAATCTCAAACCCATCAAGAGCAGCATCAATCCATTCTGCCAAAGGAGCATCCATGTTCCGAAACGTTGGTTTCCTGCAGAAGTAAGCAAGACGAGGCGACTGTCATTCAAGAATCGAAGTTAAAAAGCGAAGGCCCTTCTGAAGTTCAGTTGATTGAGCTGAGTGACGACGACGGGCATTTGAGGGTTGAAGATAAAAAGCAGAACTCAGAGAATCCAAATTGCCCCATGTGGTATTGTGCAAGTCCTCAAGGTGAGACGAGGGGACCGTTGCCGTTGTCGTTACTGAAGCAATGGAGGGACAGCAGTGCATTCGAGTTGAAATGTAAAGTTTGGAAGAGTGGTCAGAGCTCAGCAGAGGCTATCCTTTTAAGCGACGCCATCCGGTTGCTTTTTCCTGAA

mRNA sequence

ATGGAAAAAAGACTTCTACTTCAAAAGTCATCAGAACAAGCACGGTTGATAAATGAACTTCCAAAAGTGATAGCAGATATTCCTGAACCCACATTTGATGATTTATTAGAGAGGGATGAACAAGTAAGTCATAAGCATGAAGCACAACCGCCCATATGGGGTTTACAGCACAAGGCCCTGGTTGATACAAGAGACGACGGAAAAGATGTCACAGCTGTTGAGGTAGAAGAATGTCAGGTTGGTGTCCCAACTATCTCAGAGAAGCAGCAACACTTTGATGTGCCCACTTGTAAAGATTTTGCTAAAAAATCTTGTATATCAGCTGCAAAATCTCAAACCCATCAAGAGCAGCATCAATCCATTCTGCCAAAGGAGCATCCATGTTCCGAAACGTTGGTTTCCTGCAGAAGTAAGCAAGACGAGGCGACTGTCATTCAAGAATCGAAGTTAAAAAGCGAAGGCCCTTCTGAAGTTCAGTTGATTGAGCTGAGTGACGACGACGGGCATTTGAGGGTTGAAGATAAAAAGCAGAACTCAGAGAATCCAAATTGCCCCATGTGGTATTGTGCAAGTCCTCAAGGTGAGACGAGGGGACCGTTGCCGTTGTCGTTACTGAAGCAATGGAGGGACAGCAGTGCATTCGAGTTGAAATGTAAAGTTTGGAAGAGTGGTCAGAGCTCAGCAGAGGCTATCCTTTTAAGCGACGCCATCCGGTTGCTTTTTCCTGAA

Coding sequence (CDS)

ATGGAAAAAAGACTTCTACTTCAAAAGTCATCAGAACAAGCACGGTTGATAAATGAACTTCCAAAAGTGATAGCAGATATTCCTGAACCCACATTTGATGATTTATTAGAGAGGGATGAACAAGTAAGTCATAAGCATGAAGCACAACCGCCCATATGGGGTTTACAGCACAAGGCCCTGGTTGATACAAGAGACGACGGAAAAGATGTCACAGCTGTTGAGGTAGAAGAATGTCAGGTTGGTGTCCCAACTATCTCAGAGAAGCAGCAACACTTTGATGTGCCCACTTGTAAAGATTTTGCTAAAAAATCTTGTATATCAGCTGCAAAATCTCAAACCCATCAAGAGCAGCATCAATCCATTCTGCCAAAGGAGCATCCATGTTCCGAAACGTTGGTTTCCTGCAGAAGTAAGCAAGACGAGGCGACTGTCATTCAAGAATCGAAGTTAAAAAGCGAAGGCCCTTCTGAAGTTCAGTTGATTGAGCTGAGTGACGACGACGGGCATTTGAGGGTTGAAGATAAAAAGCAGAACTCAGAGAATCCAAATTGCCCCATGTGGTATTGTGCAAGTCCTCAAGGTGAGACGAGGGGACCGTTGCCGTTGTCGTTACTGAAGCAATGGAGGGACAGCAGTGCATTCGAGTTGAAATGTAAAGTTTGGAAGAGTGGTCAGAGCTCAGCAGAGGCTATCCTTTTAAGCGACGCCATCCGGTTGCTTTTTCCTGAA

Protein sequence

MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVSHKHEAQPPIWGLQHKALVDTRDDGKDVTAVEVEECQVGVPTISEKQQHFDVPTCKDFAKKSCISAAKSQTHQEQHQSILPKEHPCSETLVSCRSKQDEATVIQESKLKSEGPSEVQLIELSDDDGHLRVEDKKQNSENPNCPMWYCASPQGETRGPLPLSLLKQWRDSSAFELKCKVWKSGQSSAEAILLSDAIRLLFPE

Homology

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BLAST of MS012552 vs. NCBI nr
Match: XP_022136876.1 (uncharacterized protein At5g08430-like isoform X1 [Momordica charantia])

HSP 1 Score: 464.9 bits (1195), Expect = 4.2e-127
Identity = 242/290 (83.45%), Postives = 242/290 (83.45%), Query Frame = 0


Query: 1   MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVSHKHEAQPPIWGLQHKAL 60
           MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVSHKHEAQPPIWGLQHKAL
Sbjct: 517 MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVSHKHEAQPPIWGLQHKAL 576

Query: 61  VDTRDDGKDVT-----------------------------------------------AV 120
           VDTRDDGKDVT                                               AV
Sbjct: 577 VDTRDDGKDVTGRSLFSTFDDLLERDEQVSHKHEGQLPIWGLQHKAVVDTRDDRKDVRAV 636

Query: 121 EVEECQVGVPTISEKQQHFDVPTCKDFAKKSCISAAKSQTHQEQHQSILPKEHPCSETLV 180
           EVEECQVGVPTISEKQQHFDVPTCKDFAKKSCISAAKSQTHQEQHQSILPKEHPCSETLV
Sbjct: 637 EVEECQVGVPTISEKQQHFDVPTCKDFAKKSCISAAKSQTHQEQHQSILPKEHPCSETLV 696

Query: 181 SCRSKQDEATVIQESKLKSEGPSEVQLIELSDDDGHLRVEDKKQNSENPNCPMWYCASPQ 240
           SC SKQDEATVIQESKLKSEGPSEVQLIELSDDDGHLRVEDKKQNSENPNCPMWYCASPQ
Sbjct: 697 SCTSKQDEATVIQESKLKSEGPSEVQLIELSDDDGHLRVEDKKQNSENPNCPMWYCASPQ 756

Query: 241 GETRGPLPLSLLKQWRDSSAFELKCKVWKSGQSSAEAILLSDAIRLLFPE 244
           GETRGPLPLSLLKQWRDSSAFELKCKVWKSGQSSAEAILLSDAIRLLFPE
Sbjct: 757 GETRGPLPLSLLKQWRDSSAFELKCKVWKSGQSSAEAILLSDAIRLLFPE 806

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BLAST of MS012552 vs. NCBI nr
Match: XP_022136877.1 (uncharacterized protein At5g08430-like isoform X2 [Momordica charantia])

HSP 1 Score: 464.9 bits (1195), Expect = 4.2e-127
Identity = 242/290 (83.45%), Postives = 242/290 (83.45%), Query Frame = 0


Query: 1   MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVSHKHEAQPPIWGLQHKAL 60
           MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVSHKHEAQPPIWGLQHKAL
Sbjct: 496 MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVSHKHEAQPPIWGLQHKAL 555

Query: 61  VDTRDDGKDVT-----------------------------------------------AV 120
           VDTRDDGKDVT                                               AV
Sbjct: 556 VDTRDDGKDVTGRSLFSTFDDLLERDEQVSHKHEGQLPIWGLQHKAVVDTRDDRKDVRAV 615

Query: 121 EVEECQVGVPTISEKQQHFDVPTCKDFAKKSCISAAKSQTHQEQHQSILPKEHPCSETLV 180
           EVEECQVGVPTISEKQQHFDVPTCKDFAKKSCISAAKSQTHQEQHQSILPKEHPCSETLV
Sbjct: 616 EVEECQVGVPTISEKQQHFDVPTCKDFAKKSCISAAKSQTHQEQHQSILPKEHPCSETLV 675

Query: 181 SCRSKQDEATVIQESKLKSEGPSEVQLIELSDDDGHLRVEDKKQNSENPNCPMWYCASPQ 240
           SC SKQDEATVIQESKLKSEGPSEVQLIELSDDDGHLRVEDKKQNSENPNCPMWYCASPQ
Sbjct: 676 SCTSKQDEATVIQESKLKSEGPSEVQLIELSDDDGHLRVEDKKQNSENPNCPMWYCASPQ 735

Query: 241 GETRGPLPLSLLKQWRDSSAFELKCKVWKSGQSSAEAILLSDAIRLLFPE 244
           GETRGPLPLSLLKQWRDSSAFELKCKVWKSGQSSAEAILLSDAIRLLFPE
Sbjct: 736 GETRGPLPLSLLKQWRDSSAFELKCKVWKSGQSSAEAILLSDAIRLLFPE 785

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BLAST of MS012552 vs. NCBI nr
Match: XP_008452231.1 (PREDICTED: uncharacterized protein At5g08430 isoform X1 [Cucumis melo])

HSP 1 Score: 305.1 bits (780), Expect = 5.5e-79
Identity = 164/246 (66.67%), Postives = 187/246 (76.02%), Query Frame = 0


Query: 1   MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVSHKHEAQPPIWGLQHKAL 60
           MEKR+LLQK SEQARLI+ELPKVI DIPEPTF+DLLE DE+V+H               L
Sbjct: 522 MEKRILLQKPSEQARLIHELPKVIPDIPEPTFEDLLEEDEEVNH--------------VL 581

Query: 61  VDTRDDGKDVTAVEVEECQVGVPTISEKQQHFDVPTCKDFAKKSCISAAKSQTHQEQHQS 120
           VD  D  K  T  +VEEC +G P ISEKQQHF V +C+DFAK+SCISA + Q   EQHQS
Sbjct: 582 VDRSDHRKVATVADVEECLIGEPNISEKQQHFKVSSCEDFAKESCISATEFQADGEQHQS 641

Query: 121 ILPKEHPCSETLVSCRSKQDEATVIQESKLKSEGPSEVQLIELSDD---DGHLRVEDKKQ 180
           ILPKE+ CS+TL S  +   E+  IQESK K++  +EVQLIELSDD   DG L+V +KK+
Sbjct: 642 ILPKENVCSKTLPSSNNIPIESIKIQESKSKNKIATEVQLIELSDDDNEDGDLKVAEKKR 701

Query: 181 NSENPNCPMWYCASPQGETRGPLPLSLLKQWRDSSAFELKCKVWKSGQSSAEAILLSDAI 240
           N ENPN  MWYC SPQGETRGPLP+SLLKQWRDSSAFELKCKVWKS QSS EA+LLSDAI
Sbjct: 702 NLENPNFSMWYCTSPQGETRGPLPMSLLKQWRDSSAFELKCKVWKSDQSSQEAMLLSDAI 753

Query: 241 RLLFPE 244
           RLLFPE
Sbjct: 762 RLLFPE 753

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BLAST of MS012552 vs. NCBI nr
Match: XP_022984438.1 (uncharacterized protein At5g08430-like [Cucurbita maxima])

HSP 1 Score: 304.3 bits (778), Expect = 9.5e-79
Identity = 163/243 (67.08%), Postives = 189/243 (77.78%), Query Frame = 0


Query: 1   MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVSHKHEAQPPIWGLQHKAL 60
           MEKRLLLQKSSEQARLI+ELP+VIADI EPTFDDLL+++EQ +H               L
Sbjct: 515 MEKRLLLQKSSEQARLIHELPEVIADILEPTFDDLLKQNEQENH--------------ML 574

Query: 61  VDTRDDGKDVTAVEVEECQVGVPTISEKQQHFDVPTCKDFAKKSCISAAKSQTHQEQHQS 120
           VD RDD K  TA  VEEC +G+ TISEKQQHF+V TCK FAKKSC+SAA+ Q H+EQHQS
Sbjct: 575 VDGRDDRKVATAAMVEECLIGMQTISEKQQHFEVSTCKGFAKKSCVSAAEFQPHKEQHQS 634

Query: 121 ILPKEHPCSETLVSCRSKQDEATVIQESKLKSEGPSEVQLIELSDDDGHLRVEDKKQNSE 180
           ILPK+H  S+ L+S   +Q E   IQ+SK KS+  S+V+LIELSD++  L+ EDK Q SE
Sbjct: 635 ILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASDVELIELSDNE-DLKAEDKMQTSE 694

Query: 181 NPNCPMWYCASPQGETRGPLPLSLLKQWRDSSAFELKCKVWKSGQSSAEAILLSDAIRLL 240
           NPN  +WYCASPQGETRGPLPLSLLKQWRD S+FELKCKVWK+GQSS E I LSDAIRL 
Sbjct: 695 NPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKNGQSSQEGIPLSDAIRLF 742

Query: 241 FPE 244
           FPE
Sbjct: 755 FPE 742

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BLAST of MS012552 vs. NCBI nr
Match: XP_004133728.1 (uncharacterized protein At5g08430 [Cucumis sativus])

HSP 1 Score: 298.1 bits (762), Expect = 6.8e-77
Identity = 164/246 (66.67%), Postives = 187/246 (76.02%), Query Frame = 0


Query: 1   MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVSHKHEAQPPIWGLQHKAL 60
           MEKR LLQK SEQARLI+ELPKVI DIPEPTF+DLLE DE+V+H               L
Sbjct: 518 MEKRTLLQKPSEQARLIHELPKVIPDIPEPTFEDLLEEDEEVNH--------------VL 577

Query: 61  VDTRDDGKDVTAVEVEECQVGVPTISEKQQHFDVPTCKDFAKKSCISAAKSQTHQEQHQS 120
           VD  D  K  T  +VEE  +G P ISEKQQHF+V TC+DFAK+SCISAA+ Q H EQHQS
Sbjct: 578 VDRSDQRKVATVADVEESLIGEPNISEKQQHFEVSTCEDFAKESCISAAEFQAHGEQHQS 637

Query: 121 ILPKEHPCSETLVSCRSKQDEATVIQESKLKSEGPSEVQLIELS---DDDGHLRVEDKKQ 180
           ILPK++ CS+TL S  +   E+  IQESK K++  SEVQLIELS   D+D +L+V    +
Sbjct: 638 ILPKKNVCSKTLPSSNNIPIESIKIQESKAKNKICSEVQLIELSDVDDEDDNLKV---AK 697

Query: 181 NSENPNCPMWYCASPQGETRGPLPLSLLKQWRDSSAFELKCKVWKSGQSSAEAILLSDAI 240
           NSENPN  MWYCASPQGETRGPLP+SLLKQW+DSSAFELKCKVWKS QSS EAILLSDAI
Sbjct: 698 NSENPNFSMWYCASPQGETRGPLPMSLLKQWKDSSAFELKCKVWKSDQSSQEAILLSDAI 746

Query: 241 RLLFPE 244
           RLLFPE
Sbjct: 758 RLLFPE 746

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BLAST of MS012552 vs. ExPASy Swiss-Prot
Match: Q9FT92 (Uncharacterized protein At5g08430 OS=Arabidopsis thaliana OX=3702 GN=At5g08430 PE=1 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 3.9e-11
Identity = 72/259 (27.80%), Postives = 113/259 (43.63%), Query Frame = 0


Query: 1   MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVS---HKHEAQPPIWGLQH 60
           ++KR LLQ   EQARL+ E+P+VI        ++L++  E  S   HK + +  +     
Sbjct: 306 LDKRELLQNPDEQARLLREVPEVIG-------EELVQNPEVSSPEAHKSDNEQRLSESPL 365

Query: 61  KALVDTRDDGKDVTAVEVEECQVGVPTISEKQQHFDVPTCKDFAKKS----CISAAKSQT 120
             + +T  + +++   E ++   G   +S       + +C     K       SA     
Sbjct: 366 SCIHET-PEARNLFGGEDQQFNNGY-VMSNPITTPGITSCATEINKGLPTWIASAGAEYL 425

Query: 121 HQEQHQ---SILPKEHPCSETLVSCRSKQDEATVIQESKLKSEGPSEVQLIELSDDDG-- 180
           H +  Q    I+  E P  E+ VS          +         PSEV  IELSDDD   
Sbjct: 426 HVDVEQPANGIIGGETPTEESKVSQLQSSIPVNNVDNGSQVQPNPSEV--IELSDDDEDD 485

Query: 181 -------HLRVEDKKQNSENPNCPMWYCASPQGETRGPLPLSLLKQWRDSSAFELKCKVW 240
                    +VED +  S +     W    PQG  +GP  L+ LK W D+  F  + +VW
Sbjct: 486 NGDGETLDPKVEDVRVLSYDKEKLNWLYKDPQGLVQGPFSLTQLKAWSDAEYFTKQFRVW 545

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BLAST of MS012552 vs. ExPASy Swiss-Prot
Match: Q9SD34 (Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana OX=3702 GN=At3g51120 PE=2 SV=3)

HSP 1 Score: 46.6 bits (109), Expect = 4.7e-04
Identity = 20/79 (25.32%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 164 SDDDGHLRVEDKKQN-----SENPNCPMWYCASPQGETRGPLPLSLLKQWRDSSAFELKC 223
           +D D   +V +   N      ++    +W+   P G+T+GP  +  L++W+ S  F    
Sbjct: 691 ADKDDCSKVHNNSSNIQETGKDDEESEIWHYRDPTGKTQGPFSMVQLRRWKSSGHFPPYL 750

Query: 224 KVWKSGQSSAEAILLSDAI 238
           ++W++ ++  E++LL+DA+
Sbjct: 751 RIWRAHENQDESVLLTDAL 769

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BLAST of MS012552 vs. ExPASy Swiss-Prot
Match: Q9SIV5 (Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=NERD PE=1 SV=3)

HSP 1 Score: 46.2 bits (108), Expect = 6.1e-04
Identity = 53/257 (20.62%), Postives = 106/257 (41.25%), Query Frame = 0


Query: 1    MEKRLLLQKSSEQARLINELPKVIAD---IPEPTFDDLLERDEQVSHKH-EAQPPIWGLQ 60
            +EK  LL+   E+ R + E+P++ AD    P+   +D  E++E+   K    +   +  +
Sbjct: 1122 VEKLQLLKSPEERQRRLEEIPEIHADPKMDPDCESEDEDEKEEKEKEKQLRPRSSSFNRR 1181

Query: 61   HKALVDTRDDGKDVTAVEVEECQVGVPTISEKQQHFDVPTC---------KDFAKKSCIS 120
             +  +  R  G         E   G    S    + ++             D+   S   
Sbjct: 1182 GRDPISPRKGG-----FSSNESWTGTSNYSNTSANRELSRSYSGRGSTGRGDYLGSSDDK 1241

Query: 121  AAKS---QTHQEQHQSILPKEHPCSETLVSCRSKQDEATVIQESKLKSEGPSEVQLIELS 180
             + S      + + Q  L  E P S ++    ++   A  I   +L     SE+ +   +
Sbjct: 1242 VSDSMWTSAREREVQPSLGSEKPRSVSIPETPARSSRA--IAPPELSPRIASEISMAPPA 1301

Query: 181  DDDGHLRVEDKKQNSENPNCPMWYCASPQGETRGPLPLSLLKQWRDSSAFELKCKVWKSG 240
                   V  +     N +  +W+   P G+ +GP  ++ L++W ++  F  K ++WK+ 
Sbjct: 1302 -------VVSQPVPKSNDSEKIWHYKDPSGKVQGPFSMAQLRKWNNTGYFPAKLEIWKAN 1361

Query: 241  QSSAEAILLSDAIRLLF 242
            +S  +++LL+DA+  LF
Sbjct: 1362 ESPLDSVLLTDALAGLF 1364

[Close]

BLAST of MS012552 vs. ExPASy TrEMBL
Match: A0A6J1C6N4 (uncharacterized protein At5g08430-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008459 PE=4 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.0e-127
Identity = 242/290 (83.45%), Postives = 242/290 (83.45%), Query Frame = 0


Query: 1   MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVSHKHEAQPPIWGLQHKAL 60
           MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVSHKHEAQPPIWGLQHKAL
Sbjct: 496 MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVSHKHEAQPPIWGLQHKAL 555

Query: 61  VDTRDDGKDVT-----------------------------------------------AV 120
           VDTRDDGKDVT                                               AV
Sbjct: 556 VDTRDDGKDVTGRSLFSTFDDLLERDEQVSHKHEGQLPIWGLQHKAVVDTRDDRKDVRAV 615

Query: 121 EVEECQVGVPTISEKQQHFDVPTCKDFAKKSCISAAKSQTHQEQHQSILPKEHPCSETLV 180
           EVEECQVGVPTISEKQQHFDVPTCKDFAKKSCISAAKSQTHQEQHQSILPKEHPCSETLV
Sbjct: 616 EVEECQVGVPTISEKQQHFDVPTCKDFAKKSCISAAKSQTHQEQHQSILPKEHPCSETLV 675

Query: 181 SCRSKQDEATVIQESKLKSEGPSEVQLIELSDDDGHLRVEDKKQNSENPNCPMWYCASPQ 240
           SC SKQDEATVIQESKLKSEGPSEVQLIELSDDDGHLRVEDKKQNSENPNCPMWYCASPQ
Sbjct: 676 SCTSKQDEATVIQESKLKSEGPSEVQLIELSDDDGHLRVEDKKQNSENPNCPMWYCASPQ 735

Query: 241 GETRGPLPLSLLKQWRDSSAFELKCKVWKSGQSSAEAILLSDAIRLLFPE 244
           GETRGPLPLSLLKQWRDSSAFELKCKVWKSGQSSAEAILLSDAIRLLFPE
Sbjct: 736 GETRGPLPLSLLKQWRDSSAFELKCKVWKSGQSSAEAILLSDAIRLLFPE 785

[Close]

BLAST of MS012552 vs. ExPASy TrEMBL
Match: A0A6J1C4Q9 (uncharacterized protein At5g08430-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008459 PE=4 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.0e-127
Identity = 242/290 (83.45%), Postives = 242/290 (83.45%), Query Frame = 0


Query: 1   MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVSHKHEAQPPIWGLQHKAL 60
           MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVSHKHEAQPPIWGLQHKAL
Sbjct: 517 MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVSHKHEAQPPIWGLQHKAL 576

Query: 61  VDTRDDGKDVT-----------------------------------------------AV 120
           VDTRDDGKDVT                                               AV
Sbjct: 577 VDTRDDGKDVTGRSLFSTFDDLLERDEQVSHKHEGQLPIWGLQHKAVVDTRDDRKDVRAV 636

Query: 121 EVEECQVGVPTISEKQQHFDVPTCKDFAKKSCISAAKSQTHQEQHQSILPKEHPCSETLV 180
           EVEECQVGVPTISEKQQHFDVPTCKDFAKKSCISAAKSQTHQEQHQSILPKEHPCSETLV
Sbjct: 637 EVEECQVGVPTISEKQQHFDVPTCKDFAKKSCISAAKSQTHQEQHQSILPKEHPCSETLV 696

Query: 181 SCRSKQDEATVIQESKLKSEGPSEVQLIELSDDDGHLRVEDKKQNSENPNCPMWYCASPQ 240
           SC SKQDEATVIQESKLKSEGPSEVQLIELSDDDGHLRVEDKKQNSENPNCPMWYCASPQ
Sbjct: 697 SCTSKQDEATVIQESKLKSEGPSEVQLIELSDDDGHLRVEDKKQNSENPNCPMWYCASPQ 756

Query: 241 GETRGPLPLSLLKQWRDSSAFELKCKVWKSGQSSAEAILLSDAIRLLFPE 244
           GETRGPLPLSLLKQWRDSSAFELKCKVWKSGQSSAEAILLSDAIRLLFPE
Sbjct: 757 GETRGPLPLSLLKQWRDSSAFELKCKVWKSGQSSAEAILLSDAIRLLFPE 806

[Close]

BLAST of MS012552 vs. ExPASy TrEMBL
Match: A0A1S3BSR8 (uncharacterized protein At5g08430 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493309 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.7e-79
Identity = 164/246 (66.67%), Postives = 187/246 (76.02%), Query Frame = 0


Query: 1   MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVSHKHEAQPPIWGLQHKAL 60
           MEKR+LLQK SEQARLI+ELPKVI DIPEPTF+DLLE DE+V+H               L
Sbjct: 522 MEKRILLQKPSEQARLIHELPKVIPDIPEPTFEDLLEEDEEVNH--------------VL 581

Query: 61  VDTRDDGKDVTAVEVEECQVGVPTISEKQQHFDVPTCKDFAKKSCISAAKSQTHQEQHQS 120
           VD  D  K  T  +VEEC +G P ISEKQQHF V +C+DFAK+SCISA + Q   EQHQS
Sbjct: 582 VDRSDHRKVATVADVEECLIGEPNISEKQQHFKVSSCEDFAKESCISATEFQADGEQHQS 641

Query: 121 ILPKEHPCSETLVSCRSKQDEATVIQESKLKSEGPSEVQLIELSDD---DGHLRVEDKKQ 180
           ILPKE+ CS+TL S  +   E+  IQESK K++  +EVQLIELSDD   DG L+V +KK+
Sbjct: 642 ILPKENVCSKTLPSSNNIPIESIKIQESKSKNKIATEVQLIELSDDDNEDGDLKVAEKKR 701

Query: 181 NSENPNCPMWYCASPQGETRGPLPLSLLKQWRDSSAFELKCKVWKSGQSSAEAILLSDAI 240
           N ENPN  MWYC SPQGETRGPLP+SLLKQWRDSSAFELKCKVWKS QSS EA+LLSDAI
Sbjct: 702 NLENPNFSMWYCTSPQGETRGPLPMSLLKQWRDSSAFELKCKVWKSDQSSQEAMLLSDAI 753

Query: 241 RLLFPE 244
           RLLFPE
Sbjct: 762 RLLFPE 753

[Close]

BLAST of MS012552 vs. ExPASy TrEMBL
Match: A0A6J1JAH4 (uncharacterized protein At5g08430-like OS=Cucurbita maxima OX=3661 GN=LOC111482736 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 4.6e-79
Identity = 163/243 (67.08%), Postives = 189/243 (77.78%), Query Frame = 0


Query: 1   MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVSHKHEAQPPIWGLQHKAL 60
           MEKRLLLQKSSEQARLI+ELP+VIADI EPTFDDLL+++EQ +H               L
Sbjct: 515 MEKRLLLQKSSEQARLIHELPEVIADILEPTFDDLLKQNEQENH--------------ML 574

Query: 61  VDTRDDGKDVTAVEVEECQVGVPTISEKQQHFDVPTCKDFAKKSCISAAKSQTHQEQHQS 120
           VD RDD K  TA  VEEC +G+ TISEKQQHF+V TCK FAKKSC+SAA+ Q H+EQHQS
Sbjct: 575 VDGRDDRKVATAAMVEECLIGMQTISEKQQHFEVSTCKGFAKKSCVSAAEFQPHKEQHQS 634

Query: 121 ILPKEHPCSETLVSCRSKQDEATVIQESKLKSEGPSEVQLIELSDDDGHLRVEDKKQNSE 180
           ILPK+H  S+ L+S   +Q E   IQ+SK KS+  S+V+LIELSD++  L+ EDK Q SE
Sbjct: 635 ILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASDVELIELSDNE-DLKAEDKMQTSE 694

Query: 181 NPNCPMWYCASPQGETRGPLPLSLLKQWRDSSAFELKCKVWKSGQSSAEAILLSDAIRLL 240
           NPN  +WYCASPQGETRGPLPLSLLKQWRD S+FELKCKVWK+GQSS E I LSDAIRL 
Sbjct: 695 NPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKNGQSSQEGIPLSDAIRLF 742

Query: 241 FPE 244
           FPE
Sbjct: 755 FPE 742

[Close]

BLAST of MS012552 vs. ExPASy TrEMBL
Match: A0A0A0L6Q8 (GYF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G110690 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 3.3e-77
Identity = 164/246 (66.67%), Postives = 187/246 (76.02%), Query Frame = 0


Query: 1   MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVSHKHEAQPPIWGLQHKAL 60
           MEKR LLQK SEQARLI+ELPKVI DIPEPTF+DLLE DE+V+H               L
Sbjct: 1   MEKRTLLQKPSEQARLIHELPKVIPDIPEPTFEDLLEEDEEVNH--------------VL 60

Query: 61  VDTRDDGKDVTAVEVEECQVGVPTISEKQQHFDVPTCKDFAKKSCISAAKSQTHQEQHQS 120
           VD  D  K  T  +VEE  +G P ISEKQQHF+V TC+DFAK+SCISAA+ Q H EQHQS
Sbjct: 61  VDRSDQRKVATVADVEESLIGEPNISEKQQHFEVSTCEDFAKESCISAAEFQAHGEQHQS 120

Query: 121 ILPKEHPCSETLVSCRSKQDEATVIQESKLKSEGPSEVQLIELS---DDDGHLRVEDKKQ 180
           ILPK++ CS+TL S  +   E+  IQESK K++  SEVQLIELS   D+D +L+V    +
Sbjct: 121 ILPKKNVCSKTLPSSNNIPIESIKIQESKAKNKICSEVQLIELSDVDDEDDNLKV---AK 180

Query: 181 NSENPNCPMWYCASPQGETRGPLPLSLLKQWRDSSAFELKCKVWKSGQSSAEAILLSDAI 240
           NSENPN  MWYCASPQGETRGPLP+SLLKQW+DSSAFELKCKVWKS QSS EAILLSDAI
Sbjct: 181 NSENPNFSMWYCASPQGETRGPLPMSLLKQWKDSSAFELKCKVWKSDQSSQEAILLSDAI 229

Query: 241 RLLFPE 244
           RLLFPE
Sbjct: 241 RLLFPE 229

[Close]

BLAST of MS012552 vs. TAIR 10
Match: AT5G08430.1 (SWIB/MDM2 domain;Plus-3;GYF )

HSP 1 Score: 70.1 bits (170), Expect = 2.8e-12
Identity = 72/259 (27.80%), Postives = 113/259 (43.63%), Query Frame = 0


Query: 1   MEKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVS---HKHEAQPPIWGLQH 60
           ++KR LLQ   EQARL+ E+P+VI        ++L++  E  S   HK + +  +     
Sbjct: 306 LDKRELLQNPDEQARLLREVPEVIG-------EELVQNPEVSSPEAHKSDNEQRLSESPL 365

Query: 61  KALVDTRDDGKDVTAVEVEECQVGVPTISEKQQHFDVPTCKDFAKKS----CISAAKSQT 120
             + +T  + +++   E ++   G   +S       + +C     K       SA     
Sbjct: 366 SCIHET-PEARNLFGGEDQQFNNGY-VMSNPITTPGITSCATEINKGLPTWIASAGAEYL 425

Query: 121 HQEQHQ---SILPKEHPCSETLVSCRSKQDEATVIQESKLKSEGPSEVQLIELSDDDG-- 180
           H +  Q    I+  E P  E+ VS          +         PSEV  IELSDDD   
Sbjct: 426 HVDVEQPANGIIGGETPTEESKVSQLQSSIPVNNVDNGSQVQPNPSEV--IELSDDDEDD 485

Query: 181 -------HLRVEDKKQNSENPNCPMWYCASPQGETRGPLPLSLLKQWRDSSAFELKCKVW 240
                    +VED +  S +     W    PQG  +GP  L+ LK W D+  F  + +VW
Sbjct: 486 NGDGETLDPKVEDVRVLSYDKEKLNWLYKDPQGLVQGPFSLTQLKAWSDAEYFTKQFRVW 545

[Close]

BLAST of MS012552 vs. TAIR 10
Match: AT5G23480.1 (SWIB/MDM2 domain;Plus-3;GYF )

HSP 1 Score: 67.0 bits (162), Expect = 2.4e-11
Identity = 66/242 (27.27%), Postives = 105/242 (43.39%), Query Frame = 0


Query: 2   EKRLLLQKSSEQARLINELPKVIADIPEPTFDDLLERDEQVSHKHEAQPPIWGLQHKALV 61
           E  LLL+   EQ RL+ ++P V+A+  EP F D  +  + V+      P  +   H++  
Sbjct: 346 ENSLLLKNPEEQLRLLCDVPDVVAEKLEPEFVD--DDGKLVNDATVPNPEAFTEAHQSDE 405

Query: 62  DTRDDGKDVTAVE--VEECQVGVPTISEKQQHFDV---PTCKDFAKKSCISAAKSQTHQE 121
           + +      ++++  +E+  +   +   K  H DV   P          I+  +  T   
Sbjct: 406 EIQPSDLPDSSIQKTLEDQPIWTASAGNKDLHEDVYEPPANGITLNTDSITEGEMNTKVS 465

Query: 122 QHQSILPKEHPCSETLVSCRSKQDEATVIQESKLKSEGPSEVQLIELSDDDGHLRVE--D 181
           QHQS  P                    VI  S       + +++IELSDDD     +  D
Sbjct: 466 QHQSSTP--------------------VIDLSNKTQAHSNPIEIIELSDDDDDDEKDKND 525

Query: 182 KKQNSENPNCPMWYCASPQGETRGPLPLSLLKQWRDSSAF--ELKCKVWKSGQSSAEAIL 235
           +   S +P   MW+   P+G+T GP  L+ LK W D   F      KVWK+G+S   A+L
Sbjct: 526 QAYQSYDPKKVMWFYEYPKGKTHGPFSLTDLKTWSDEEYFVGVPDFKVWKTGES---AVL 562

[Close]

BLAST of MS012552 vs. TAIR 10
Match: AT3G51120.1 (DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding )

HSP 1 Score: 46.6 bits (109), Expect = 3.3e-05
Identity = 20/79 (25.32%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 164 SDDDGHLRVEDKKQN-----SENPNCPMWYCASPQGETRGPLPLSLLKQWRDSSAFELKC 223
           +D D   +V +   N      ++    +W+   P G+T+GP  +  L++W+ S  F    
Sbjct: 691 ADKDDCSKVHNNSSNIQETGKDDEESEIWHYRDPTGKTQGPFSMVQLRRWKSSGHFPPYL 750

Query: 224 KVWKSGQSSAEAILLSDAI 238
           ++W++ ++  E++LL+DA+
Sbjct: 751 RIWRAHENQDESVLLTDAL 769

[Close]

BLAST of MS012552 vs. TAIR 10
Match: AT2G16485.1 (nucleic acid binding;zinc ion binding;DNA binding )

HSP 1 Score: 46.2 bits (108), Expect = 4.3e-05
Identity = 53/257 (20.62%), Postives = 106/257 (41.25%), Query Frame = 0


Query: 1    MEKRLLLQKSSEQARLINELPKVIAD---IPEPTFDDLLERDEQVSHKH-EAQPPIWGLQ 60
            +EK  LL+   E+ R + E+P++ AD    P+   +D  E++E+   K    +   +  +
Sbjct: 1122 VEKLQLLKSPEERQRRLEEIPEIHADPKMDPDCESEDEDEKEEKEKEKQLRPRSSSFNRR 1181

Query: 61   HKALVDTRDDGKDVTAVEVEECQVGVPTISEKQQHFDVPTC---------KDFAKKSCIS 120
             +  +  R  G         E   G    S    + ++             D+   S   
Sbjct: 1182 GRDPISPRKGG-----FSSNESWTGTSNYSNTSANRELSRSYSGRGSTGRGDYLGSSDDK 1241

Query: 121  AAKS---QTHQEQHQSILPKEHPCSETLVSCRSKQDEATVIQESKLKSEGPSEVQLIELS 180
             + S      + + Q  L  E P S ++    ++   A  I   +L     SE+ +   +
Sbjct: 1242 VSDSMWTSAREREVQPSLGSEKPRSVSIPETPARSSRA--IAPPELSPRIASEISMAPPA 1301

Query: 181  DDDGHLRVEDKKQNSENPNCPMWYCASPQGETRGPLPLSLLKQWRDSSAFELKCKVWKSG 240
                   V  +     N +  +W+   P G+ +GP  ++ L++W ++  F  K ++WK+ 
Sbjct: 1302 -------VVSQPVPKSNDSEKIWHYKDPSGKVQGPFSMAQLRKWNNTGYFPAKLEIWKAN 1361

Query: 241  QSSAEAILLSDAIRLLF 242
            +S  +++LL+DA+  LF
Sbjct: 1362 ESPLDSVLLTDALAGLF 1364

The following BLAST results are available for this feature:

BLAST of MS012552 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136876.1	4.2e-127	83.45	uncharacterized protein At5g08430-like isoform X1 [Momordica charantia]	[more]
XP_022136877.1	4.2e-127	83.45	uncharacterized protein At5g08430-like isoform X2 [Momordica charantia]	[more]
XP_008452231.1	5.5e-79	66.67	PREDICTED: uncharacterized protein At5g08430 isoform X1 [Cucumis melo]	[more]
XP_022984438.1	9.5e-79	67.08	uncharacterized protein At5g08430-like [Cucurbita maxima]	[more]
XP_004133728.1	6.8e-77	66.67	uncharacterized protein At5g08430 [Cucumis sativus]	[more]

BLAST of MS012552 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FT92	3.9e-11	27.80	Uncharacterized protein At5g08430 OS=Arabidopsis thaliana OX=3702 GN=At5g08430 P...	[more]
Q9SD34	4.7e-04	25.32	Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9SIV5	6.1e-04	20.62	Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of MS012552 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C6N4	2.0e-127	83.45	uncharacterized protein At5g08430-like isoform X2 OS=Momordica charantia OX=3673...	[more]
A0A6J1C4Q9	2.0e-127	83.45	uncharacterized protein At5g08430-like isoform X1 OS=Momordica charantia OX=3673...	[more]
A0A1S3BSR8	2.7e-79	66.67	uncharacterized protein At5g08430 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A6J1JAH4	4.6e-79	67.08	uncharacterized protein At5g08430-like OS=Cucurbita maxima OX=3661 GN=LOC1114827...	[more]
A0A0A0L6Q8	3.3e-77	66.67	GYF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G110690 PE=4 SV...	[more]

BLAST of MS012552 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08430.1	2.8e-12	27.80	SWIB/MDM2 domain;Plus-3;GYF	[more]
AT5G23480.1	2.4e-11	27.27	SWIB/MDM2 domain;Plus-3;GYF	[more]
AT3G51120.1	3.3e-05	25.32	DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding	[more]
AT2G16485.1	4.3e-05	20.62	nucleic acid binding;zinc ion binding;DNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035445	GYF-like domain superfamily	GENE3D	3.30.1490.40		coord: 186..243 e-value: 2.1E-18 score: 67.7
IPR035445	GYF-like domain superfamily	SUPERFAMILY	55277	GYF domain	coord: 176..239
None	No IPR available	PANTHER	PTHR46851	OS01G0884500 PROTEIN	coord: 1..239
None	No IPR available	PANTHER	PTHR46851:SF11	OS01G0884500 PROTEIN	coord: 1..239
IPR003169	GYF domain	PROSITE	PS50829	GYF	coord: 184..238 score: 9.117294

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012552.1	MS012552.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding