MS012545 (gene) Bitter gourd (TR) v1

Overview


Name	MS012545
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	KH domain-containing protein
Location	scaffold63: 1461644 .. 1466221 (+)
RNA-Seq Expression	MS012545
Synteny	MS012545

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCGGCCCACGCATCTCCTCACAGGACCCCTTCAATTCCCTCCTCAGATCGGGAGAGGTATTCTTTCTTTGCCCATCTTCTCAATTCTGGATGATTATTTGCTTGTTTTCCCTTTTCATTTTTTTTTTTAATTTGGGTTCCTTGTTTGATTGATCGTACATAACATGATTTTTTCTTCAACTTTTTAATTTCTTGCGGTGTTTTATAATTCTCGTTGTGGCATGTTGTTTTGTACCTTTTGGACACGATGGGTTACATGTGACTGTGATTTGTGTTGTGTGATAATGGCAGGTATCTAACTGAATTGCTATCGGAGAGACAAAAGTTGGGTCCCTTCGTGCAAGTTTTACCTCATTGTAGCAGACTTCTGAATCAGGGTGGGTTTAATTGTTATTATTTCTTCTGCTGGCAGTATTGGAATTATAATTTCCTCCTGGAACTATTGTTGGGATATTTCATCCTTTTAAATGTATTATAGGTTGACACTGTTCTTGTAATCACTTGAACAAATGTAATTACAACTAAGCATACGAGTTTCCATATGTTCTCGTGATTTTAATAAGCATGCAACGTTAACAACGTACTTGGAATTCTTGTATAAAAAAAATGTACTTGGAATTGTAGCTGACTTGCTATATTTTTCTATTATATGCTACTAACAATTGGTTGCTATGAAGTTGTATCGAAGCATCAACCTTGGTGTTAATTTGTTGTATGAACGAAAAGCTTGAAGCACAAGTGGATTTGCTGGAGAGGAAAATTTAACGTGTTGAAACTGAAAGAAGTAGGTGATGAGAATTCATTCTCTAGAAGTTGCTAGCTCAATAATGGTGAAGTGTAAATCGTGCTCAATATGGTAGAATAAACATTGAAGGAGATATGGCAATTTGCTGTAGGGGAAGAAACCATTAACGAGGAATCTGGAGGGGTGGGAATATTTGATGCGCTTCAATGAAGAAATGGATTTGCTACTCAAGAATGGACAGTCACATGAGTTATATGACAAGAATCACTGGGATTAACGAAGTAGGTCAGGTGGCAACAGAGAATAACAAAGGTTTGGTGGAAAGGAAGGTGCGAGAAGATTGTAAATTTGAGCTGTGCAAAAGAAAGTGTCAAGGGGTGGATTAACAAAAGGCAATGCAAGTTTAGGATTTCTTGGGGAGAAACTATTTGCAACCCTTCCGTATGTAGTGGCATTTAGTTTCAGGGATTGGGAAGGAGAAAGCTTCAGTCAAGAACCATTCTTTGATCCACACCTTGAGGACAAGGTGTGATTTTTTGGAAGTATGATAGGATTTGTAGCAAGGTGTAGTATAGCAATTGCTATTGGTAATTTAAGAGGTGTGGTTCGTGTTGGGGACCATCAGCTGTTAGTTTAGGTGGGGTGGTTGAGAGAGATGGAATTTTGTGGTTGTTTGGAAATGAGGAACCCATGTTATCTTAAAATACATGAAACCTATCTTGCTATATTTTTCCTATTACATACAGTTAAGAGTCCCCATTGCTTGCCAGTGCCTATATGACCAAGTTCTGACCTGGGTCGAGGTCAAACTAAGTTTAGGCTAAGCCAGTTATGTCCAAGAGTGTCACTCTCTCCATATGGACAGAGGCAAAAAGATGTATCCTACTGTCCTATTCAGCACTTTGTCAACTCATATTAATTAGACAAAGTCAAGAACAATTTTTCCTACTGTCCTACCCCATCAAAAAATGATGTTAACTTGACGATGACATGAATCTGAGCCACGTTCTTATAATTTTTTGGATTATTTTTCTCTGCTCCACATGAATAGTCATGTGGTGATAGTTTTCTGAGATTTTGACGGAAGTTCCTAATGACTCGTAATTTTCATGAATAACAAGCCATTCATCTCCAGAGTTCTCGTCTTAAACAGAGTATTTTCTTAGTCAATTGCATGAGCATCCCTTTATTTATTTCATCTCATTGCAGAAATCAGACGGCTATCAGGCCTTAATCAAACTTCTGTGGATCATGAGAGATTTGAGCATGGGAGTCCTTACAGATCACTAGGCCAGCTATCGAATGGAAGACCAATGGACTTGGAAGGATGGCCTCCAATGCAAATGGAGGTAAATATATTAATATCCTACTAGGCTGGAAAATTATGCGATAATGGATAATAATGGGTTTAAATTTTTGCCTTTGCATTGACTATATCAAGTGTCCTCGATCTATATTTTTCTTTCTCAGTTTGGGTAGTTTCTCAATATGAAGGCTTTCTCTTTCATCACTACTTTCTATATATAAGGATTTTTATTGTGAAAATGGAAAACCAGGCTTTCATTAAGATGAATGATAGAATACAATGCAAACTGATAATGGCCACCTCCAAGATTCAACGGTTTTAGGTTATTAAATCTGTACTTTGGGGGCTTGAATCCAGAAATTTGCAGGGTATCTCCAAACATCCCTTGCTCTTACCAGCTGGCACTCCATGGGTCTCTCGGTTTTAACTTGAGCATTCTCAAAATATAAAAAGTAGGCCTTTCATATTTTTGACTCGTGTGGTTTAGTAATGTGATTTTTTTACTGCAGGGAAGTGGACACGTCCATGGGATGGCTCCCCTTCAAGCTCATTCAATGGGTTGGCCGAGGGTGCAAGGAATTCCTACTACGCCAATAGTGAAGCGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAATGTAAGTTAAAATATTTTTATGTTAGGTAGTGATGGTACTGACCTTCTGCCTCTCTGATGTTAGTAGTTTCTTGCTCAAATCACGGCAGTATAATTTTGTTGGACGACTTCTGGGACCACGTGGAAACTCCTTGAAAAGAGTTGAAGCCTTGACAGAGTGTAGGGTGTACATAAGAGGCAAGGGCTCTATCAAAGATGCTTTAGAGGTACTGTAAAATTTTTCCTTTGTGTGGCTAAAATCTTACTAATTGCATCGGTTAGACTTCATTCATGGTTTTCTGGTCGATCTTTACTAACTTATGCTATACAATTTTTACTCTCCCTTTTTCTTACGTGTTCTCCCAACTTTGAAATAATCACTCAATTTATAGATTTCTAGATTTTCGAGGAACACCGTGAGAATCCTTTTCACTAATACTTCTTTTAATTTGTTAGGGCTCGTTTGGTATGTTCTCGTTTCTGGTTTTTCGTAATGTTTTCACTCCCTCTCACTGGAAATGAGGAACCCATGTTATCTTTGAAATAATCGCTCAATTATAGATTTCCAGATTTTCACTCCCTCTAATTGTTTCTATATTTTGTGATGTTTTTAAATTTAATTCTTTGCAACAAATGGGGTAAATATTTCTATACCTTTTTTGTGGCTTGTTCGGTGGTAAGGAAATCAGATAATCGCTAACTTGAACATAGCTCAACTGGTTAAGGTATATATCTTCGATATTTGAATTCTCACATCCACTAATAAATAAATAAATAATCTTTTCACGGAAAAAAAAGAGACTATAGATAGTTCTTGTGTGGTCTCTAGTAGGGGTGGATTGAAGAAAGAAGGCTGCCCCTATCGGTTTGTCTTAGATTAAAAAAAAAAGTTAATAATTTAAAGTTTTCTGCCTCATTTGTCTCCAAGTTTTAGAATTTGAAAGATTATATATAAAAAGCTTTTGCCCCTCTTTGGTAAAAAATTTCTAGCTCAGCTTAGCTCATTTTAATCTCCGGTGTGAGATTACACCACTCTTTTGATAACCAAGATTGGAAGGTTTCTCTGGTAAAAATATATAGAGTACAATATACTTTTGGTTTTTGAAATTTGAAATTTGAGGTTGGTATCTATTTGGTCCGTAAAGTTCCAAAAGTAACACTTTACATTCTTAAGTTTGAAAAGTTGTTCTAAATGGTTGGGGGCCGGAGGAGATGAAGGAAAGGAGGGAGAAGAAAGAAAATAGTGCCAACGCATCAAGATTAATATAATTTTCTATATTAGCGATGCCACGTCGTCATCTTTTCATTAGTCAAACTAATGGTCGAATGAGCTCAAGGACCATTTAAAATCATTTTTCAAACTCTAGTCCCGTGTGTTACTTTCAGATCTTTAGGGATCAAATAGACGTCAATCTCAAATTTCATGGATCAAAAGTGTATTTTACCTGAATGTATATACACCTTTTAATAATACTTACAATGGATCTGAATGTTGTGCTTTAGGAAGAGAAACTAAAGGACAAGCCTGGATATGAGCATCTTAATGAGCCATTGCATCTGTTGGTTGAGGCAGAATTCCCCGAGGATACAATAAACTCACGCTTGGATAATGCAGTGGCAGTTTTAGAAAGCCTTTTGAAGCCTGTGGTATGAACAAAAAAACCCCTCATGTCATTCCTTTCTATGAAGTTTTCTGAAGTTTCTGTTATTTCAGGATGAATTGCTGGATCAATACAAGAAGCAACAACTTAGAGAACTGGCATTACTAAATGGCACCCTAAGGGAGGAAAGTCCGAGTATGAGCCCGAGCATGTCCCCGTTTAACAGCACGGGGCTCAAACGGGCCAAGACGGGAAGG

mRNA sequence

ATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCGGCCCACGCATCTCCTCACAGGACCCCTTCAATTCCCTCCTCAGATCGGGAGAGGTATCTAACTGAATTGCTATCGGAGAGACAAAAGTTGGGTCCCTTCGTGCAAGTTTTACCTCATTGTAGCAGACTTCTGAATCAGGAAATCAGACGGCTATCAGGCCTTAATCAAACTTCTGTGGATCATGAGAGATTTGAGCATGGGAGTCCTTACAGATCACTAGGCCAGCTATCGAATGGAAGACCAATGGACTTGGAAGGATGGCCTCCAATGCAAATGGAGGGAAGTGGACACGTCCATGGGATGGCTCCCCTTCAAGCTCATTCAATGGGTTGGCCGAGGGTGCAAGGAATTCCTACTACGCCAATAGTGAAGCGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAATTATAATTTTGTTGGACGACTTCTGGGACCACGTGGAAACTCCTTGAAAAGAGTTGAAGCCTTGACAGAGTGTAGGGTGTACATAAGAGGCAAGGGCTCTATCAAAGATGCTTTAGAGGAAGAGAAACTAAAGGACAAGCCTGGATATGAGCATCTTAATGAGCCATTGCATCTGTTGGTTGAGGCAGAATTCCCCGAGGATACAATAAACTCACGCTTGGATAATGCAGTGGCAGTTTTAGAAAGCCTTTTGAAGCCTGTGGATGAATTGCTGGATCAATACAAGAAGCAACAACTTAGAGAACTGGCATTACTAAATGGCACCCTAAGGGAGGAAAGTCCGAGTATGAGCCCGAGCATGTCCCCGTTTAACAGCACGGGGCTCAAACGGGCCAAGACGGGAAGG

Coding sequence (CDS)

ATGGGGGAGAGAACCCCACCTGGGAGTTACTTCCATTACCCTCCCCCTTCGGCCCACGCATCTCCTCACAGGACCCCTTCAATTCCCTCCTCAGATCGGGAGAGGTATCTAACTGAATTGCTATCGGAGAGACAAAAGTTGGGTCCCTTCGTGCAAGTTTTACCTCATTGTAGCAGACTTCTGAATCAGGAAATCAGACGGCTATCAGGCCTTAATCAAACTTCTGTGGATCATGAGAGATTTGAGCATGGGAGTCCTTACAGATCACTAGGCCAGCTATCGAATGGAAGACCAATGGACTTGGAAGGATGGCCTCCAATGCAAATGGAGGGAAGTGGACACGTCCATGGGATGGCTCCCCTTCAAGCTCATTCAATGGGTTGGCCGAGGGTGCAAGGAATTCCTACTACGCCAATAGTGAAGCGAGTCGTTAGACTTGATGTACCTGTTGACAAATATCCAAATTATAATTTTGTTGGACGACTTCTGGGACCACGTGGAAACTCCTTGAAAAGAGTTGAAGCCTTGACAGAGTGTAGGGTGTACATAAGAGGCAAGGGCTCTATCAAAGATGCTTTAGAGGAAGAGAAACTAAAGGACAAGCCTGGATATGAGCATCTTAATGAGCCATTGCATCTGTTGGTTGAGGCAGAATTCCCCGAGGATACAATAAACTCACGCTTGGATAATGCAGTGGCAGTTTTAGAAAGCCTTTTGAAGCCTGTGGATGAATTGCTGGATCAATACAAGAAGCAACAACTTAGAGAACTGGCATTACTAAATGGCACCCTAAGGGAGGAAAGTCCGAGTATGAGCCCGAGCATGTCCCCGTTTAACAGCACGGGGCTCAAACGGGCCAAGACGGGAAGG

Protein sequence

MGERTPPGSYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAPLQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR

Homology

[Close]

BLAST of MS012545 vs. NCBI nr
Match: XP_022136599.1 (KH domain-containing protein At1g09660/At1g09670 [Momordica charantia])

HSP 1 Score: 588.6 bits (1516), Expect = 3.0e-164
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRL 60

Query: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAP 120
           LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAP
Sbjct: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAP 120

Query: 121 LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLK 240
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLK 240

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290

[Close]

BLAST of MS012545 vs. NCBI nr
Match: XP_038904738.1 (KH domain-containing protein At1g09660/At1g09670 isoform X1 [Benincasa hispida])

HSP 1 Score: 573.5 bits (1477), Expect = 1.0e-159
Identity = 284/290 (97.93%), Postives = 286/290 (98.62%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIP  DRERYL ELLSERQKLGPFVQVLPHCSRL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIP-LDRERYLAELLSERQKLGPFVQVLPHCSRL 60

Query: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAP 120
           LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEG+GHVHGM P
Sbjct: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGTGHVHGMGP 120

Query: 121 LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLK 240
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLD+AVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 240

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 289

[Close]

BLAST of MS012545 vs. NCBI nr
Match: XP_004133720.1 (KH domain-containing protein At1g09660/At1g09670 [Cucumis sativus] >XP_008452242.1 PREDICTED: KH domain-containing protein At1g09660/At1g09670 [Cucumis melo] >KAE8650188.1 hypothetical protein Csa_010365 [Cucumis sativus])

HSP 1 Score: 569.3 bits (1466), Expect = 1.9e-158
Identity = 282/290 (97.24%), Postives = 285/290 (98.28%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIP  DRER L ELLSERQKLGPFVQVLPHCSRL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIP-LDRERCLAELLSERQKLGPFVQVLPHCSRL 60

Query: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAP 120
           LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPPMQMEGSGHVHGM P
Sbjct: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGP 120

Query: 121 LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLK 240
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLD+AVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLK 240

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 289

[Close]

BLAST of MS012545 vs. NCBI nr
Match: KAA0060582.1 (KH domain-containing protein [Cucumis melo var. makuwa] >TYK02290.1 KH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 569.3 bits (1466), Expect = 1.9e-158
Identity = 282/290 (97.24%), Postives = 285/290 (98.28%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIP  DRER L ELLSERQKLGPFVQVLPHCSRL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIP-LDRERCLAELLSERQKLGPFVQVLPHCSRL 60

Query: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAP 120
           LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPPMQMEGSGHVHGM P
Sbjct: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGP 120

Query: 121 LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLK 240
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLD+AVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLK 240

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 289

[Close]

BLAST of MS012545 vs. NCBI nr
Match: KAG6600718.1 (KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 567.8 bits (1462), Expect = 5.5e-158
Identity = 281/290 (96.90%), Postives = 284/290 (97.93%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIP  DRERYL ELLSERQKLGPFVQVLPHCSRL
Sbjct: 39  MGERTPPGSYFHYPPPSAHASPHRTPSIP-LDRERYLAELLSERQKLGPFVQVLPHCSRL 98

Query: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAP 120
           LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVH + P
Sbjct: 99  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGP 158

Query: 121 LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           LQAHSM WPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 159 LQAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 218

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLK 240
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLD+AVAVLESLLK
Sbjct: 219 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 278

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFN+TGLKRAKTGR
Sbjct: 279 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 327

[Close]

BLAST of MS012545 vs. ExPASy Swiss-Prot
Match: Q8GWR3 (KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana OX=3702 GN=At1g09660/At1g09670 PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.2e-100
Identity = 192/295 (65.08%), Postives = 231/295 (78.31%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRL 60
           M ER  PGS+F YP     ASP+R+P  P SDRERYLTELL ERQKLGPF+QV+P+C RL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSP-CPPSDRERYLTELLQERQKLGPFLQVMPNCCRL 70

Query: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAP 120
           LN EIRR+S       D +R+EHGSP+RSLGQ +NG+ +DLEGW  MQ E + H+   +P
Sbjct: 71  LNHEIRRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASP 130

Query: 121 LQAHS-MGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC 180
            +  S +GW  + G+P  PIVK+V+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVE  T C
Sbjct: 131 FRGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHC 190

Query: 181 RVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLL 240
           RV+IRG+GS+KD ++EEKLK KPGYEHL EPLH+L+EAE PED INSRL++AV  LESLL
Sbjct: 191 RVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLL 250

Query: 241 KPVDELLDQYKKQQLRELALLNGTLREESPS------MSPSMSPFNSTGLKRAKT 289
           KP+DE +D YK++QL+ELA LNGTLREESPS      +SPSMSPFNS   KRAKT
Sbjct: 251 KPMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSPSMSPFNS---KRAKT 296

[Close]

BLAST of MS012545 vs. ExPASy Swiss-Prot
Match: Q8GYR4 (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 5.4e-76
Identity = 160/286 (55.94%), Postives = 195/286 (68.18%), Query Frame = 0


Query: 9   SYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRLLNQEIRRL 68
           +Y ++ P  A +   RTPS  S    +Y+++LL+E QKLGPF+QVLP CSRLLNQEI R+
Sbjct: 6   NYNNFSPSRAASPQIRTPS--SDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRI 65

Query: 69  SGL--NQTSVDHERFEH--GSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAPLQAH 128
           +G+  NQ   D +R  H   SP  S   +SN     L GW  +  E  G  HGMA     
Sbjct: 66  TGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMA----- 125

Query: 129 SMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIR 188
            M W      P++  VKR++RLD+PVD YPN+NFVGRLLGPRGNSLKRVEA T CRVYIR
Sbjct: 126 -MEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIR 185

Query: 189 GKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLKPVDE 248
           GKGSIKD  +EEKLK KPGYEHLNE LH+L+EA+ P D ++ +L  A  ++E L+KPVDE
Sbjct: 186 GKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDE 245

Query: 249 LLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
             D  K+QQLRELALLN  LRE SP  S S+SPFNS  +KR KTGR
Sbjct: 246 SQDYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of MS012545 vs. ExPASy Swiss-Prot
Match: Q0WLR1 (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 7.9e-75
Identity = 155/291 (53.26%), Postives = 196/291 (67.35%), Query Frame = 0


Query: 8   GSYFHYP-----PPSAHASPHRTPSIPSS-----DRERYLTELLSERQKLGPFVQVLPHC 67
           G +  YP     PPSA  SP+ +  + S      ++E+YL+ELL+ER KL PF+ VLPH 
Sbjct: 23  GRFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHV 82

Query: 68  SRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHG 127
            RL+NQEI R++ L + ++   RF+H SP  S G   N R  D+ GW             
Sbjct: 83  CRLMNQEILRVTTLLENALSQSRFDHPSPLASGGIFQNSR-ADMNGWASQFPSERSVSSS 142

Query: 128 MAPLQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALT 187
            AP       W    G  +  IVKR +R+D+PVDKYPNYNFVGRLLGPRGNSLKRVEA T
Sbjct: 143 PAP------NWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEAST 202

Query: 188 ECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLES 247
           +CRV IRG+GSIKD ++E+ ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ 
Sbjct: 203 DCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDD 262

Query: 248 LLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKT 289
           LL PV+E  D YKKQQLRELALLNG+LREE   MS S+SP+NS G+KRAKT
Sbjct: 263 LLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of MS012545 vs. ExPASy Swiss-Prot
Match: Q75GR5 (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 6.2e-72
Identity = 150/279 (53.76%), Postives = 190/279 (68.10%), Query Frame = 0


Query: 16  PSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRLLNQEIRRLSGLNQT- 75
           P+ + SP +  S P+    +YL ELL+E QKLGPF+QVLP CS+LL+QEI R+S +    
Sbjct: 11  PARNLSP-QIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVSSIVHNH 70

Query: 76  ---SVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAPLQAHSMGWPRV 135
                D  RF   SP  S    SN        W  +  E  G   G       SM W   
Sbjct: 71  GFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGLHQERLGFPQGT------SMDWQGA 130

Query: 136 QGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKGSIKD 195
              P++ +VK+++RLDVPVD YPN+NFVGR+LGPRGNSLKRVEA T CRV+IRGKGSIKD
Sbjct: 131 PPSPSSHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKD 190

Query: 196 ALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLKPVDELLDQYKK 255
             +E+KL+ KPGYEHL++PLH+L+EAEFP   I++RL +A  V+E LLKPVDE  D YK+
Sbjct: 191 PGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDFYKR 250

Query: 256 QQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           QQLRELA+LN TLRE+SP    S+SPF++ G+KRAKTG+
Sbjct: 251 QQLRELAMLNSTLREDSPHPG-SVSPFSNGGMKRAKTGQ 281

[Close]

BLAST of MS012545 vs. ExPASy Swiss-Prot
Match: Q9FKT4 (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.1e-71
Identity = 151/281 (53.74%), Postives = 187/281 (66.55%), Query Frame = 0


Query: 15  PPSAHASPH-----RTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 74
           PPSA  SP+     R+ S    ++E+YL+ELL+ER KL PF+ VLPH  RLLNQEI R++
Sbjct: 39  PPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVT 98

Query: 75  GL--NQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAPLQAHSMG 134
            L  N T +     +H SP  S G   N R  D+ GW               P       
Sbjct: 99  TLLENATVLSQSGLDHPSPLASGGIFQNAR-ADMNGWASQFPSERSVPSSPGP------N 158

Query: 135 WPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKG 194
           W    G  +  I KR +R+D+PVD YPN+NFVGRLLGPRGNSLKRVEA T+CRV IRG+G
Sbjct: 159 WLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRG 218

Query: 195 SIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLKPVDELLD 254
           SIKD ++EE ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ LL P++E  D
Sbjct: 219 SIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHD 278

Query: 255 QYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKT 289
            YKKQQLRELALLNGTLREE   MS S+SP+NS G+KRAKT
Sbjct: 279 MYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

[Close]

BLAST of MS012545 vs. ExPASy TrEMBL
Match: A0A6J1C4S3 (KH domain-containing protein At1g09660/At1g09670 OS=Momordica charantia OX=3673 GN=LOC111008264 PE=4 SV=1)

HSP 1 Score: 588.6 bits (1516), Expect = 1.5e-164
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRL 60

Query: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAP 120
           LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAP
Sbjct: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAP 120

Query: 121 LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLK 240
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLK 240

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 290

[Close]

BLAST of MS012545 vs. ExPASy TrEMBL
Match: A0A5D3BT43 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00980 PE=4 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 9.1e-159
Identity = 282/290 (97.24%), Postives = 285/290 (98.28%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIP  DRER L ELLSERQKLGPFVQVLPHCSRL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIP-LDRERCLAELLSERQKLGPFVQVLPHCSRL 60

Query: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAP 120
           LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPPMQMEGSGHVHGM P
Sbjct: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGP 120

Query: 121 LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLK 240
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLD+AVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLK 240

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 289

[Close]

BLAST of MS012545 vs. ExPASy TrEMBL
Match: A0A0A0L3B7 (KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G110600 PE=4 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 9.1e-159
Identity = 282/290 (97.24%), Postives = 285/290 (98.28%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIP  DRER L ELLSERQKLGPFVQVLPHCSRL
Sbjct: 111 MGERTPPGSYFHYPPPSAHASPHRTPSIP-LDRERCLAELLSERQKLGPFVQVLPHCSRL 170

Query: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAP 120
           LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPPMQMEGSGHVHGM P
Sbjct: 171 LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGP 230

Query: 121 LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 231 LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 290

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLK 240
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLD+AVAVLESLLK
Sbjct: 291 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLK 350

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 351 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 399

[Close]

BLAST of MS012545 vs. ExPASy TrEMBL
Match: A0A1S3BST0 (KH domain-containing protein At1g09660/At1g09670 OS=Cucumis melo OX=3656 GN=LOC103493316 PE=4 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 9.1e-159
Identity = 282/290 (97.24%), Postives = 285/290 (98.28%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIP  DRER L ELLSERQKLGPFVQVLPHCSRL
Sbjct: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIP-LDRERCLAELLSERQKLGPFVQVLPHCSRL 60

Query: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAP 120
           LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMD+EGWPPMQMEGSGHVHGM P
Sbjct: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDMEGWPPMQMEGSGHVHGMGP 120

Query: 121 LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 121 LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLK 240
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTIN+RLD+AVAVLESLLK
Sbjct: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINARLDHAVAVLESLLK 240

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR
Sbjct: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 289

[Close]

BLAST of MS012545 vs. ExPASy TrEMBL
Match: A0A6J1FX42 (KH domain-containing protein At1g09660/At1g09670-like OS=Cucurbita moschata OX=3662 GN=LOC111447793 PE=4 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 2.6e-158
Identity = 281/290 (96.90%), Postives = 284/290 (97.93%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRL 60
           MGERTPPGSYFHYPPPSAHASPHRTPSIP  DRERYL ELLSERQKLGPFVQVLPHCSRL
Sbjct: 2   MGERTPPGSYFHYPPPSAHASPHRTPSIP-LDRERYLAELLSERQKLGPFVQVLPHCSRL 61

Query: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAP 120
           LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVH + P
Sbjct: 62  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHSLGP 121

Query: 121 LQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 180
           LQAHSM WPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR
Sbjct: 122 LQAHSMAWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECR 181

Query: 181 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLK 240
           VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLD+AVAVLESLLK
Sbjct: 182 VYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDHAVAVLESLLK 241

Query: 241 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
           PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFN+TGLKRAKTGR
Sbjct: 242 PVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNTTGLKRAKTGR 290

[Close]

BLAST of MS012545 vs. TAIR 10
Match: AT1G09660.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 366.3 bits (939), Expect = 2.3e-101
Identity = 192/295 (65.08%), Postives = 231/295 (78.31%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRL 60
           M ER  PGS+F YP     ASP+R+P  P SDRERYLTELL ERQKLGPF+QV+P+C RL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSP-CPPSDRERYLTELLQERQKLGPFLQVMPNCCRL 70

Query: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAP 120
           LN EIRR+S       D +R+EHGSP+RSLGQ +NG+ +DLEGW  MQ E + H+   +P
Sbjct: 71  LNHEIRRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASP 130

Query: 121 LQAHS-MGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC 180
            +  S +GW  + G+P  PIVK+V+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVE  T C
Sbjct: 131 FRGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHC 190

Query: 181 RVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLL 240
           RV+IRG+GS+KD ++EEKLK KPGYEHL EPLH+L+EAE PED INSRL++AV  LESLL
Sbjct: 191 RVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLL 250

Query: 241 KPVDELLDQYKKQQLRELALLNGTLREESPS------MSPSMSPFNSTGLKRAKT 289
           KP+DE +D YK++QL+ELA LNGTLREESPS      +SPSMSPFNS   KRAKT
Sbjct: 251 KPMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSPSMSPFNS---KRAKT 296

[Close]

BLAST of MS012545 vs. TAIR 10
Match: AT1G09660.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 310.5 bits (794), Expect = 1.5e-84
Identity = 157/243 (64.61%), Postives = 191/243 (78.60%), Query Frame = 0


Query: 1   MGERTPPGSYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRL 60
           M ER  PGS+F YP     ASP+R+P  P SDRERYLTELL ERQKLGPF+QV+P+C RL
Sbjct: 11  MEERISPGSFFQYPLSGFRASPNRSP-CPPSDRERYLTELLQERQKLGPFLQVMPNCCRL 70

Query: 61  LNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAP 120
           LN EIRR+S       D +R+EHGSP+RSLGQ +NG+ +DLEGW  MQ E + H+   +P
Sbjct: 71  LNHEIRRVSSF----PDLDRYEHGSPFRSLGQPTNGK-LDLEGWSMMQAEENCHLQRASP 130

Query: 121 LQAHS-MGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTEC 180
            +  S +GW  + G+P  PIVK+V+RLDVPVDKYP+YNFVGR+LGPRGNSLKRVE  T C
Sbjct: 131 FRGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHC 190

Query: 181 RVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLL 240
           RV+IRG+GS+KD ++EEKLK KPGYEHL EPLH+L+EAE PED INSRL++AV  LESLL
Sbjct: 191 RVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLL 247

Query: 241 KPV 243
           KP+
Sbjct: 251 KPM 247

[Close]

BLAST of MS012545 vs. TAIR 10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 285.8 bits (730), Expect = 3.9e-77
Identity = 160/286 (55.94%), Postives = 195/286 (68.18%), Query Frame = 0


Query: 9   SYFHYPPPSAHASPHRTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRLLNQEIRRL 68
           +Y ++ P  A +   RTPS  S    +Y+++LL+E QKLGPF+QVLP CSRLLNQEI R+
Sbjct: 6   NYNNFSPSRAASPQIRTPS--SDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRI 65

Query: 69  SGL--NQTSVDHERFEH--GSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAPLQAH 128
           +G+  NQ   D +R  H   SP  S   +SN     L GW  +  E  G  HGMA     
Sbjct: 66  TGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMA----- 125

Query: 129 SMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIR 188
            M W      P++  VKR++RLD+PVD YPN+NFVGRLLGPRGNSLKRVEA T CRVYIR
Sbjct: 126 -MEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIR 185

Query: 189 GKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLKPVDE 248
           GKGSIKD  +EEKLK KPGYEHLNE LH+L+EA+ P D ++ +L  A  ++E L+KPVDE
Sbjct: 186 GKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDE 245

Query: 249 LLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKTGR 291
             D  K+QQLRELALLN  LRE SP  S S+SPFNS  +KR KTGR
Sbjct: 246 SQDYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of MS012545 vs. TAIR 10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 282.0 bits (720), Expect = 5.6e-76
Identity = 155/291 (53.26%), Postives = 196/291 (67.35%), Query Frame = 0


Query: 8   GSYFHYP-----PPSAHASPHRTPSIPSS-----DRERYLTELLSERQKLGPFVQVLPHC 67
           G +  YP     PPSA  SP+ +  + S      ++E+YL+ELL+ER KL PF+ VLPH 
Sbjct: 23  GRFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHV 82

Query: 68  SRLLNQEIRRLSGLNQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHG 127
            RL+NQEI R++ L + ++   RF+H SP  S G   N R  D+ GW             
Sbjct: 83  CRLMNQEILRVTTLLENALSQSRFDHPSPLASGGIFQNSR-ADMNGWASQFPSERSVSSS 142

Query: 128 MAPLQAHSMGWPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALT 187
            AP       W    G  +  IVKR +R+D+PVDKYPNYNFVGRLLGPRGNSLKRVEA T
Sbjct: 143 PAP------NWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEAST 202

Query: 188 ECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLES 247
           +CRV IRG+GSIKD ++E+ ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ 
Sbjct: 203 DCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDD 262

Query: 248 LLKPVDELLDQYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKT 289
           LL PV+E  D YKKQQLRELALLNG+LREE   MS S+SP+NS G+KRAKT
Sbjct: 263 LLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of MS012545 vs. TAIR 10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 271.6 bits (693), Expect = 7.6e-73
Identity = 151/281 (53.74%), Postives = 187/281 (66.55%), Query Frame = 0


Query: 15  PPSAHASPH-----RTPSIPSSDRERYLTELLSERQKLGPFVQVLPHCSRLLNQEIRRLS 74
           PPSA  SP+     R+ S    ++E+YL+ELL+ER KL PF+ VLPH  RLLNQEI R++
Sbjct: 39  PPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVT 98

Query: 75  GL--NQTSVDHERFEHGSPYRSLGQLSNGRPMDLEGWPPMQMEGSGHVHGMAPLQAHSMG 134
            L  N T +     +H SP  S G   N R  D+ GW               P       
Sbjct: 99  TLLENATVLSQSGLDHPSPLASGGIFQNAR-ADMNGWASQFPSERSVPSSPGP------N 158

Query: 135 WPRVQGIPTTPIVKRVVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEALTECRVYIRGKG 194
           W    G  +  I KR +R+D+PVD YPN+NFVGRLLGPRGNSLKRVEA T+CRV IRG+G
Sbjct: 159 WLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRG 218

Query: 195 SIKDALEEEKLKDKPGYEHLNEPLHLLVEAEFPEDTINSRLDNAVAVLESLLKPVDELLD 254
           SIKD ++EE ++ KPGYEHLNEPLH+LVEAE P + +++RL  A  +L+ LL P++E  D
Sbjct: 219 SIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHD 278

Query: 255 QYKKQQLRELALLNGTLREESPSMSPSMSPFNSTGLKRAKT 289
            YKKQQLRELALLNGTLREE   MS S+SP+NS G+KRAKT
Sbjct: 279 MYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

The following BLAST results are available for this feature:

BLAST of MS012545 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136599.1	3.0e-164	100.00	KH domain-containing protein At1g09660/At1g09670 [Momordica charantia]	[more]
XP_038904738.1	1.0e-159	97.93	KH domain-containing protein At1g09660/At1g09670 isoform X1 [Benincasa hispida]	[more]
XP_004133720.1	1.9e-158	97.24	KH domain-containing protein At1g09660/At1g09670 [Cucumis sativus] >XP_008452242...	[more]
KAA0060582.1	1.9e-158	97.24	KH domain-containing protein [Cucumis melo var. makuwa] >TYK02290.1 KH domain-co...	[more]
KAG6600718.1	5.5e-158	96.90	KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MS012545 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWR3	3.2e-100	65.08	KH domain-containing protein At1g09660/At1g09670 OS=Arabidopsis thaliana OX=3702...	[more]
Q8GYR4	5.4e-76	55.94	KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08...	[more]
Q0WLR1	7.9e-75	53.26	KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26...	[more]
Q75GR5	6.2e-72	53.76	KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
Q9FKT4	1.1e-71	53.74	KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56...	[more]

BLAST of MS012545 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C4S3	1.5e-164	100.00	KH domain-containing protein At1g09660/At1g09670 OS=Momordica charantia OX=3673 ...	[more]
A0A5D3BT43	9.1e-159	97.24	KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0L3B7	9.1e-159	97.24	KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G110600 PE=4 SV=...	[more]
A0A1S3BST0	9.1e-159	97.24	KH domain-containing protein At1g09660/At1g09670 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1FX42	2.6e-158	96.90	KH domain-containing protein At1g09660/At1g09670-like OS=Cucurbita moschata OX=3...	[more]

BLAST of MS012545 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09660.1	2.3e-101	65.08	RNA-binding KH domain-containing protein	[more]
AT1G09660.2	1.5e-84	64.61	RNA-binding KH domain-containing protein	[more]
AT3G08620.1	3.9e-77	55.94	RNA-binding KH domain-containing protein	[more]
AT4G26480.1	5.6e-76	53.26	RNA-binding KH domain-containing protein	[more]
AT5G56140.1	7.6e-73	53.74	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 140..243 e-value: 0.0013 score: 28.0
IPR032377	STAR protein, homodimerisation region	PFAM	PF16544	STAR_dimer	coord: 35..69 e-value: 5.1E-10 score: 38.8
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 29..272 e-value: 2.9E-68 score: 231.9
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 146..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR11208:SF101	OS01G0886300 PROTEIN	coord: 8..290
None	No IPR available	CDD	cd02395	SF1_like-KH	coord: 145..265 e-value: 1.07981E-50 score: 161.258
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 8..290

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012545.1	MS012545.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding