MS012544 (gene) Bitter gourd (TR) v1

Overview


Name	MS012544
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RAB GTPase 11C
Location	scaffold63: 1458301 .. 1460153 (+)
RNA-Seq Expression	MS012544
Synteny	MS012544

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCGGAGACCCGACGACGACTACGATTACCTCTTCAAAGTTGTGTTAATCGGCGATTCCGGCGTTGGGAAATCCAACTTGCTTTCCCGATTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTCTCTCTCTCTCTCTTGTTTTCTCCCTCATTCTGCATCTATATCTGCGTACATTCGTTTGCGTTGTATGTTCTGCATTCTCGATCTATGAGTAAATCTGCATTTGGATTGATTTTGGAACTCCAATTTTCTTGGATGCATTTGTTTGTTTCTCATTTGATGAAATGATCTGATTTCTTTTCGTTTAACGAAGGCGGTTTTGTCTGAGTTGAGTTTCTGAATCTTCTCATGCGGATCTGTGTTCTCAATTGGTTGTTCTGGTTGTTCACATTTTGATTTAGAGGAATGGGGGAAGTTATTCGTCGAATTATGGAAAATGCCTTTAAATTTTAATTAGGTTTAACTTTTAATGGAAATAAATCAAATTATGATCTGGGTATGGGTAAGATATTTCGTCCCAACTTGCAGAGAGTGAGGACAAATCCAAATCTGTTCATGCCAATGATTTTAGTCCACAGAACTTTAATGCCATTCTTTATAAATCCAAATCTGAATTAATGAGTTATTTTCTGCAAATTCGATTAGTATCTTGGTTTTTATTCAAATCTTGATAACATCTCCCGCCTCTCCTCCATTCCTTCTATTTTGATTGCGCGTATTTGACAGTTTCAAACCATTCCAGATCAATCCTAAAGAAGACCAGAATTTCACAAGTATTTAAACAATGAAGCAGCGTATACGGATCTTGCTGCATCCCTTGATTTACACCGTCAATATGTGGTCATTTAATTCTTAGTTTCTTGGATATGGTTGGTAGTTGGAGAATGTTATTTAGTATCCAGTTCTAACATATAGACGTTATGCTCATAGATTTTGGAACTTCTTGGATCATCTTATTTCTTTGTTATATTGATACAGCTATGTGATTTTAGTGGCCCCTTTGATGAACTTAATGTTGCAATAATTTGATGGCCACCAGTCTTGTGAAATGGTGATATCCTTTCATTGGCCCTCTTAGGCTAAAATTACAGGCACAGACGCATAGTTTCCAATTTATTCTCCGATACTTGCATATGAAGTTTGTCTTTGCTTTATAAAATCAACAAGGCGTTTTGGATCATCCAAACAGAATAGCTTTTGATCATTTGTCTGTGCCCTTTTAGCCTTTAGGTGTGTTTTTTGGTTCATTGATGAAGCGATCTCGTTTATTTATTGTTCTTTGATTATCAAAGTTACGAAGAAGAGAAATGCTGCATGTTTAATAGGTCGAGGGAAGAACCGTGAAAGCACAGATATGGGACACGGCTGGTCAAGAGCGATACAGAGCAATCACCAGTGCTTACTACAGGGGCGCCCTTGGAGCTCTTCTAGTTTACGACACAACGAAAGCAATGACTTTCGACAATGTAAGCCGTTGGTTGAAGGAACTTAGGGACCATGCAGATTCCAACATAGTCATCATGTTAATCGGAAACAAGACTGATCTAAAACACCTCCGAGCGGTTGCGACAGAGGATGCTCAGAGCTACGCCGAGAAAGAAGGGCTATCTTTCCTTGAAACTTCTGCTCTTGAAGCAACAAACGTGGAGAAGGCTTTCCAAACTATTCTCTCAGAGATATATAGGATAATCAGTAAGAAGTCCCTCAATTCGAATGAGCCAGCTGCTGCTAGCAGCATTAAAGAAGGAAAAACCATTGTGGTTGGGGAATCTGAGGCCAATACAAAGAAATCTTGCTGCTCCTCTTCT

mRNA sequence

ATGGCCCGGAGACCCGACGACGACTACGATTACCTCTTCAAAGTTGTGTTAATCGGCGATTCCGGCGTTGGGAAATCCAACTTGCTTTCCCGATTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTCGAGGGAAGAACCGTGAAAGCACAGATATGGGACACGGCTGGTCAAGAGCGATACAGAGCAATCACCAGTGCTTACTACAGGGGCGCCCTTGGAGCTCTTCTAGTTTACGACACAACGAAAGCAATGACTTTCGACAATGTAAGCCGTTGGTTGAAGGAACTTAGGGACCATGCAGATTCCAACATAGTCATCATGTTAATCGGAAACAAGACTGATCTAAAACACCTCCGAGCGGTTGCGACAGAGGATGCTCAGAGCTACGCCGAGAAAGAAGGGCTATCTTTCCTTGAAACTTCTGCTCTTGAAGCAACAAACGTGGAGAAGGCTTTCCAAACTATTCTCTCAGAGATATATAGGATAATCAGTAAGAAGTCCCTCAATTCGAATGAGCCAGCTGCTGCTAGCAGCATTAAAGAAGGAAAAACCATTGTGGTTGGGGAATCTGAGGCCAATACAAAGAAATCTTGCTGCTCCTCTTCT

Coding sequence (CDS)

ATGGCCCGGAGACCCGACGACGACTACGATTACCTCTTCAAAGTTGTGTTAATCGGCGATTCCGGCGTTGGGAAATCCAACTTGCTTTCCCGATTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCCACTCGTACTCTTCAGGTCGAGGGAAGAACCGTGAAAGCACAGATATGGGACACGGCTGGTCAAGAGCGATACAGAGCAATCACCAGTGCTTACTACAGGGGCGCCCTTGGAGCTCTTCTAGTTTACGACACAACGAAAGCAATGACTTTCGACAATGTAAGCCGTTGGTTGAAGGAACTTAGGGACCATGCAGATTCCAACATAGTCATCATGTTAATCGGAAACAAGACTGATCTAAAACACCTCCGAGCGGTTGCGACAGAGGATGCTCAGAGCTACGCCGAGAAAGAAGGGCTATCTTTCCTTGAAACTTCTGCTCTTGAAGCAACAAACGTGGAGAAGGCTTTCCAAACTATTCTCTCAGAGATATATAGGATAATCAGTAAGAAGTCCCTCAATTCGAATGAGCCAGCTGCTGCTAGCAGCATTAAAGAAGGAAAAACCATTGTGGTTGGGGAATCTGAGGCCAATACAAAGAAATCTTGCTGCTCCTCTTCT

Protein sequence

MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKKSLNSNEPAAASSIKEGKTIVVGESEANTKKSCCSSS

Homology

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BLAST of MS012544 vs. NCBI nr
Match: XP_022136956.1 (ras-related protein RABA2a [Momordica charantia])

HSP 1 Score: 417.2 bits (1071), Expect = 8.9e-113
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSNEPAAASSIKEGKTIVVGESEANTKKSCCSSS 217
           SLNSNEPAAASSIKEGKTIVVGESEANTKKSCCSSS
Sbjct: 181 SLNSNEPAAASSIKEGKTIVVGESEANTKKSCCSSS 216

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BLAST of MS012544 vs. NCBI nr
Match: XP_004133721.1 (ras-related protein RABA2a [Cucumis sativus] >XP_031739127.1 ras-related protein RABA2a [Cucumis sativus] >KGN56262.1 hypothetical protein Csa_009772 [Cucumis sativus])

HSP 1 Score: 406.8 bits (1044), Expect = 1.2e-109
Identity = 209/216 (96.76%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYD TK MTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSF+ETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSNEPAAASSIKEGKTIVVGESEANTKKSCCSSS 217
           SLNS EPAAA++IKEGKTIVVGESEANTKK+CCSSS
Sbjct: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSSS 216

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BLAST of MS012544 vs. NCBI nr
Match: XP_008452243.1 (PREDICTED: ras-related protein RABA2a [Cucumis melo] >XP_008452244.1 PREDICTED: ras-related protein RABA2a [Cucumis melo])

HSP 1 Score: 405.6 bits (1041), Expect = 2.7e-109
Identity = 208/216 (96.30%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYD TK MTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSF+ETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSNEPAAASSIKEGKTIVVGESEANTKKSCCSSS 217
           SLNS EP+AA++IKEGKTIVVGESEANTKK+CCSSS
Sbjct: 181 SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSSS 216

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BLAST of MS012544 vs. NCBI nr
Match: XP_038905598.1 (ras-related protein RABA2a [Benincasa hispida])

HSP 1 Score: 401.4 bits (1030), Expect = 5.1e-108
Identity = 208/216 (96.30%), Postives = 212/216 (98.15%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGALGALLVYD TK MTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSF+ETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSNEPAAASSIKEGKTIVVGESEANTKKSCCSSS 217
           SLNS EPAAA +IKEGKTIVVGESEANTKK+CCSSS
Sbjct: 181 SLNSEEPAAA-NIKEGKTIVVGESEANTKKACCSSS 215

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BLAST of MS012544 vs. NCBI nr
Match: XP_023517501.1 (ras-related protein RABA2a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 400.6 bits (1028), Expect = 8.6e-108
Identity = 205/216 (94.91%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYD TK MTFDNV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLS +ETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSNEPAAASSIKEGKTIVVGESEANTKKSCCSSS 217
           SLNS+EPAAA++IKEGK+IVVGESEAN+KK+CCSSS
Sbjct: 181 SLNSDEPAAAANIKEGKSIVVGESEANSKKACCSSS 216

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BLAST of MS012544 vs. ExPASy Swiss-Prot
Match: O04486 (Ras-related protein RABA2a OS=Arabidopsis thaliana OX=3702 GN=RABA2A PE=2 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.3e-101
Identity = 191/217 (88.02%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYD TK  TF+NVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSF+ETSALEA NVEKAFQTILSE+YRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 SLNSNEPAAASSIKEGKTI-VVGESEANTKKSCCSSS 217
           S++S++  A ++IKEG+TI V   SE+N KK CCSSS
Sbjct: 181 SISSDQTTANANIKEGQTIDVAATSESNAKKPCCSSS 217

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BLAST of MS012544 vs. ExPASy Swiss-Prot
Match: Q40193 (Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 1.9e-89
Identity = 166/216 (76.85%), Postives = 189/216 (87.50%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLRAV+ +D  + +EKEGLSFLETSALEATN+EKAFQTIL+EIY I+SKK
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180

Query: 181 SLNSNEPAAASSIK-EGKTIVVGESEANTKKSCCSS 216
           +L + E  A +S+  +G TI V ++  NTKK CCS+
Sbjct: 181 ALAAQEATAGASVPGQGTTINVADTSGNTKKGCCST 216

[Close]

BLAST of MS012544 vs. ExPASy Swiss-Prot
Match: Q39434 (Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 1.9e-89
Identity = 168/215 (78.14%), Postives = 191/215 (88.84%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DLKHLRAV+ ED Q+ AEKEGLSFLETSALEA N+EKAFQTIL+EIY IISKK
Sbjct: 121 MMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKK 180

Query: 181 SLNSNEPAAASSIKEGKTIVVGESEANTKKSCCSS 216
           +L + E A+++   +G TI V ++ AN ++SCCS+
Sbjct: 181 ALAAQE-ASSNLPGQGTTINVADASANQRRSCCST 214

[Close]

BLAST of MS012544 vs. ExPASy Swiss-Prot
Match: Q96283 (Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4)

HSP 1 Score: 328.9 bits (842), Expect = 4.2e-89
Identity = 169/217 (77.88%), Postives = 187/217 (86.18%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           M  R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT QVEG+T
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGA+GALLVYD TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED QS AEKEGLSFLETSALEATNVEKAFQTIL EIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 SLNSNEPAAASSI--KEGKTIVVGESEANTKKSCCSS 216
           +L + E AAA+S    +G TI V ++    K++CCSS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGAKRACCSS 217

[Close]

BLAST of MS012544 vs. ExPASy Swiss-Prot
Match: Q9LNW1 (Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2)

HSP 1 Score: 325.5 bits (833), Expect = 4.6e-88
Identity = 167/215 (77.67%), Postives = 187/215 (86.98%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD TK  TF+NV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED +S AEKEGLSFLETSALEATN+EKAFQTILSEIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 SLNSNEPAAASSIKEGKTIVVGESEANTKKSCCSS 216
           +L + E AA +   +G  I + +S A  +K CCS+
Sbjct: 181 ALAAQE-AAGNLPGQGTAINISDSSATNRKGCCST 214

[Close]

BLAST of MS012544 vs. ExPASy TrEMBL
Match: A0A6J1C4Z3 (ras-related protein RABA2a OS=Momordica charantia OX=3673 GN=LOC111008523 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 4.3e-113
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSNEPAAASSIKEGKTIVVGESEANTKKSCCSSS 217
           SLNSNEPAAASSIKEGKTIVVGESEANTKKSCCSSS
Sbjct: 181 SLNSNEPAAASSIKEGKTIVVGESEANTKKSCCSSS 216

[Close]

BLAST of MS012544 vs. ExPASy TrEMBL
Match: A0A0A0L6P8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110590 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 5.8e-110
Identity = 209/216 (96.76%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYD TK MTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSF+ETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSNEPAAASSIKEGKTIVVGESEANTKKSCCSSS 217
           SLNS EPAAA++IKEGKTIVVGESEANTKK+CCSSS
Sbjct: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of MS012544 vs. ExPASy TrEMBL
Match: A0A1S3BTD1 (ras-related protein RABA2a OS=Cucumis melo OX=3656 GN=LOC103493317 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.3e-109
Identity = 208/216 (96.30%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYD TK MTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSF+ETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSNEPAAASSIKEGKTIVVGESEANTKKSCCSSS 217
           SLNS EP+AA++IKEGKTIVVGESEANTKK+CCSSS
Sbjct: 181 SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of MS012544 vs. ExPASy TrEMBL
Match: A0A6J1EU78 (ras-related protein RABA2a OS=Cucurbita moschata OX=3662 GN=LOC111435963 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 7.1e-108
Identity = 208/217 (95.85%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYD TK MTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSF+ETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSNEP-AAASSIKEGKTIVVGESEANTKKSCCSSS 217
           SLNS EP AAA++IKEGKTIVVGESEAN+KK CCSSS
Sbjct: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 217

[Close]

BLAST of MS012544 vs. ExPASy TrEMBL
Match: A0A6J1J221 (ras-related protein RABA2a OS=Cucurbita maxima OX=3661 GN=LOC111482705 PE=4 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 2.7e-107
Identity = 207/217 (95.39%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYD TK MTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSF+ETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSNEP-AAASSIKEGKTIVVGESEANTKKSCCSSS 217
           SLNS EP AAA++IKEGK IVVGESEAN+KK CCSSS
Sbjct: 181 SLNSEEPAAAAANIKEGKAIVVGESEANSKKPCCSSS 217

[Close]

BLAST of MS012544 vs. TAIR 10
Match: AT1G09630.1 (RAB GTPase 11C )

HSP 1 Score: 370.5 bits (950), Expect = 8.9e-103
Identity = 191/217 (88.02%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYD TK  TF+NVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSF+ETSALEA NVEKAFQTILSE+YRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 SLNSNEPAAASSIKEGKTI-VVGESEANTKKSCCSSS 217
           S++S++  A ++IKEG+TI V   SE+N KK CCSSS
Sbjct: 181 SISSDQTTANANIKEGQTIDVAATSESNAKKPCCSSS 217

[Close]

BLAST of MS012544 vs. TAIR 10
Match: AT3G46830.1 (RAB GTPase homolog A2C )

HSP 1 Score: 328.9 bits (842), Expect = 3.0e-90
Identity = 169/217 (77.88%), Postives = 187/217 (86.18%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           M  R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT QVEG+T
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGA+GALLVYD TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED QS AEKEGLSFLETSALEATNVEKAFQTIL EIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 SLNSNEPAAASSI--KEGKTIVVGESEANTKKSCCSS 216
           +L + E AAA+S    +G TI V ++    K++CCSS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGAKRACCSS 217

[Close]

BLAST of MS012544 vs. TAIR 10
Match: AT1G07410.1 (RAB GTPase homolog A2B )

HSP 1 Score: 325.5 bits (833), Expect = 3.3e-89
Identity = 167/215 (77.67%), Postives = 187/215 (86.98%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD TK  TF+NV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED +S AEKEGLSFLETSALEATN+EKAFQTILSEIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 SLNSNEPAAASSIKEGKTIVVGESEANTKKSCCSS 216
           +L + E AA +   +G  I + +S A  +K CCS+
Sbjct: 181 ALAAQE-AAGNLPGQGTAINISDSSATNRKGCCST 214

[Close]

BLAST of MS012544 vs. TAIR 10
Match: AT5G59150.1 (RAB GTPase homolog A2D )

HSP 1 Score: 324.3 bits (830), Expect = 7.3e-89
Identity = 167/217 (76.96%), Postives = 187/217 (86.18%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R + DYDYLFK+VLIGDSGVGK+N+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK DL HLR+VA ED Q+ AE EGLSFLETSALEATNVEKAFQT+L+EIY IISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 SLNSNEPAAASSI--KEGKTIVVGESEANTKKSCCSS 216
           +L + E AAA+S    +G TI V ++    K+ CCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSGAGKRGCCST 217

[Close]

BLAST of MS012544 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 293.5 bits (750), Expect = 1.4e-79
Identity = 150/212 (70.75%), Postives = 174/212 (82.08%), Query Frame = 0


Query: 4   RPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA 63
           R +DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRTL+V+G+ VKA
Sbjct: 5   RVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKA 64

Query: 64  QIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVIMLI 123
           QIWDTAGQERYRAITSAYYRGA+GALLVYD T+  TF+NV RWLKEL++H D NIV+ML+
Sbjct: 65  QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLV 124

Query: 124 GNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKKSLN 183
           GNK+DL+HL AV TED +SYAE+E L F+ETSALEATNVE AF  +L++IYRI SKK + 
Sbjct: 125 GNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVE 184

Query: 184 SNEPAAASSIKEGKTIVVGESEANTKKSCCSS 216
           + E   AS  K  K  V  +  A  K  CCS+
Sbjct: 185 AGEDGNASVPKGEKIEVKNDVSALKKLGCCSN 216

The following BLAST results are available for this feature:

BLAST of MS012544 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136956.1	8.9e-113	100.00	ras-related protein RABA2a [Momordica charantia]	[more]
XP_004133721.1	1.2e-109	96.76	ras-related protein RABA2a [Cucumis sativus] >XP_031739127.1 ras-related protein...	[more]
XP_008452243.1	2.7e-109	96.30	PREDICTED: ras-related protein RABA2a [Cucumis melo] >XP_008452244.1 PREDICTED: ...	[more]
XP_038905598.1	5.1e-108	96.30	ras-related protein RABA2a [Benincasa hispida]	[more]
XP_023517501.1	8.6e-108	94.91	ras-related protein RABA2a-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS012544 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04486	1.3e-101	88.02	Ras-related protein RABA2a OS=Arabidopsis thaliana OX=3702 GN=RABA2A PE=2 SV=1	[more]
Q40193	1.9e-89	76.85	Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1	[more]
Q39434	1.9e-89	78.14	Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1	[more]
Q96283	4.2e-89	77.88	Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4	[more]
Q9LNW1	4.6e-88	77.67	Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2	[more]

BLAST of MS012544 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C4Z3	4.3e-113	100.00	ras-related protein RABA2a OS=Momordica charantia OX=3673 GN=LOC111008523 PE=4 S...	[more]
A0A0A0L6P8	5.8e-110	96.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110590 PE=4 SV=1	[more]
A0A1S3BTD1	1.3e-109	96.30	ras-related protein RABA2a OS=Cucumis melo OX=3656 GN=LOC103493317 PE=4 SV=1	[more]
A0A6J1EU78	7.1e-108	95.85	ras-related protein RABA2a OS=Cucurbita moschata OX=3662 GN=LOC111435963 PE=4 SV...	[more]
A0A6J1J221	2.7e-107	95.39	ras-related protein RABA2a OS=Cucurbita maxima OX=3661 GN=LOC111482705 PE=4 SV=1	[more]

BLAST of MS012544 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09630.1	8.9e-103	88.02	RAB GTPase 11C	[more]
AT3G46830.1	3.0e-90	77.88	RAB GTPase homolog A2C	[more]
AT1G07410.1	3.3e-89	77.67	RAB GTPase homolog A2B	[more]
AT5G59150.1	7.3e-89	76.96	RAB GTPase homolog A2D	[more]
AT1G16920.1	1.4e-79	70.75	RAB GTPase homolog A1B	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 151..173 score: 43.72 coord: 54..76 score: 52.08 coord: 116..129 score: 50.58 coord: 36..52 score: 36.23 coord: 13..34 score: 55.2
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..176 e-value: 1.6E-25 score: 100.8
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..176 e-value: 4.2E-110 score: 381.8
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 18..215 e-value: 8.2E-6 score: 33.0
None	No IPR available	PANTHER	PTHR47979:SF18	RAS-RELATED PROTEIN YPTC6	coord: 1..216
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..216
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..213 score: 36.220936
None	No IPR available	CDD	cd01868	Rab11_like	coord: 10..174 e-value: 8.38479E-128 score: 355.329
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 15..172 e-value: 2.9E-11 score: 24.8
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 14..174 e-value: 1.2E-60 score: 203.8
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..216 score: 16.732254
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..213 e-value: 2.1E-73 score: 247.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..182
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 11..170 e-value: 1.3E-39 score: 133.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012544.1	MS012544.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding