MS012479 (gene) Bitter gourd (TR) v1

Overview


Name	MS012479
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	WRKY protein
Location	scaffold63: 995469 .. 996957 (-)
RNA-Seq Expression	MS012479
Synteny	MS012479

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGATGGTTGCCAATGGAGGAAATATGGTCAGAAAATTGCTAAAGGGAATCCATGCCCTCGAGCCTATTATCGTTGCACAGTTGCACCAGGATGCCCAGTTAGAAAGCAGGTATCTTTTTTATTTTTTATATACCACAGAATTACAAATAATTAAATACTATAATAATTTTAAAAATATAAGTACGTTGGATTTATAGTTGATTCTTTAAAAATAATTATAATAATAATAACCAAATTCAAAATTCAAAATAGGTTTAAAATGTTAGCTTATTTAATTACTATTCGATTATTATTTTCTTTTACTTTACTCTTTAGAAACCACTTTTGAAATTGGGATATATTTCAAAAATAAAAATATTAAAACAATATATATTCTCATCTCTTAACATTTGACTGATGTTTTTTTTTTCTAATAAAAATTATAAAATGAAGCAATTGTTAGTAGCAACGTAATTTTAAAAAAAAATACAACTAAAAATAGAATCAATCATATTAGGTTCTTAAAATAGGTTAATTTTCCCTAAAATATTCTTTTAAGAAAACTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTTCAAGAACATATATATACACATATACCTGACAAACGTGGAACTTAAATCTTTATCAGTCAAATTTTTTTCTTTTTTCTTTCTCTTTGTTTTTGGCCATTGTAGTAATACCAACTTCATTTTTTGTGCATAAGCGGGTTTCCAAAAGAACTCTACCCCAACTGATAGTAGTTGGCACCTAGTCAACGATAATATTAGGCTTAAATACTAATCTAATCCTCTAATTTTTCCTTTTAATTCATTTTGGTACTTTTCGAAAGATTAATTTTGATCTATGTACTGAAAATGAGATAGTTTTTATCCCTTTATTTTCATTTTCATCTCGTTTATTTCACTAAAAAATTTTCACTAAATTGGAAACTGTACCAAAATAGTATTTGAAACATATATGATCTTATGAAGTTGTTAAAATGTGTTACTACAATGTTTTAATGATCTATATATATAATTTAGGTACAAAGATGTTTGGAAGACATGTCGATTCTGATAACAACGTACGAAGGAACACACAACCATCCACTCCCTGTTGGAGCCACAGCCATGGCTTCCACAGCCTCAGCACCACCTTCTTCTTCTTCTTCTTTCATGTTCTTAAACTCTCTTCCAAACCCTAATATTAATATCTTGAATTCCTCTTCATATTCTACAAACCCTAATCTCTACCCCTCACCCTCCAATAATTGGATCAACCCCTCTCATTCTTATTACCACACCAACAATCATTTTCAGCCTCATGATCTTTTGAAACCGCCCGAAGATCACAAGCCCCCGTTGACGCCAGAGAGCGTCTCCGCCATTGCTTCCGACCCCAAGTTTCGAGTCGCGGTCGCAGCCGCCATTTCGTCGCTCATTAACAAAGACGGCCAGCATCAGGACGGCGGCGGAGAA

mRNA sequence

ATGAATGATGGTTGCCAATGGAGGAAATATGGTCAGAAAATTGCTAAAGGGAATCCATGCCCTCGAGCCTATTATCGTTGCACAGTTGCACCAGGATGCCCAGTTAGAAAGCAGGTACAAAGATGTTTGGAAGACATGTCGATTCTGATAACAACGTACGAAGGAACACACAACCATCCACTCCCTGTTGGAGCCACAGCCATGGCTTCCACAGCCTCAGCACCACCTTCTTCTTCTTCTTCTTTCATGTTCTTAAACTCTCTTCCAAACCCTAATATTAATATCTTGAATTCCTCTTCATATTCTACAAACCCTAATCTCTACCCCTCACCCTCCAATAATTGGATCAACCCCTCTCATTCTTATTACCACACCAACAATCATTTTCAGCCTCATGATCTTTTGAAACCGCCCGAAGATCACAAGCCCCCGTTGACGCCAGAGAGCGTCTCCGCCATTGCTTCCGACCCCAAGTTTCGAGTCGCGGTCGCAGCCGCCATTTCGTCGCTCATTAACAAAGACGGCCAGCATCAGGACGGCGGCGGAGAA

Coding sequence (CDS)

ATGAATGATGGTTGCCAATGGAGGAAATATGGTCAGAAAATTGCTAAAGGGAATCCATGCCCTCGAGCCTATTATCGTTGCACAGTTGCACCAGGATGCCCAGTTAGAAAGCAGGTACAAAGATGTTTGGAAGACATGTCGATTCTGATAACAACGTACGAAGGAACACACAACCATCCACTCCCTGTTGGAGCCACAGCCATGGCTTCCACAGCCTCAGCACCACCTTCTTCTTCTTCTTCTTTCATGTTCTTAAACTCTCTTCCAAACCCTAATATTAATATCTTGAATTCCTCTTCATATTCTACAAACCCTAATCTCTACCCCTCACCCTCCAATAATTGGATCAACCCCTCTCATTCTTATTACCACACCAACAATCATTTTCAGCCTCATGATCTTTTGAAACCGCCCGAAGATCACAAGCCCCCGTTGACGCCAGAGAGCGTCTCCGCCATTGCTTCCGACCCCAAGTTTCGAGTCGCGGTCGCAGCCGCCATTTCGTCGCTCATTAACAAAGACGGCCAGCATCAGGACGGCGGCGGAGAA

Protein sequence

MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTASAPPSSSSSFMFLNSLPNPNINILNSSSYSTNPNLYPSPSNNWINPSHSYYHTNNHFQPHDLLKPPEDHKPPLTPESVSAIASDPKFRVAVAAAISSLINKDGQHQDGGGE

Homology

[Close]

BLAST of MS012479 vs. NCBI nr
Match: XP_022149157.1 (probable WRKY transcription factor 9 [Momordica charantia])

HSP 1 Score: 370.2 bits (949), Expect = 1.1e-98
Identity = 181/183 (98.91%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 1   MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 60
           MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP
Sbjct: 251 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 310

Query: 61  LPVGATAMASTASAPPSSSSSFMFLNSLPNPNINILNSSSYSTNPNLYPSPSNNWINPSH 120
           LPVGATAMAS ASAPPSSSSSFMFLNSLPNPNINILNSSSYSTNPNLYPSPSNNWINPSH
Sbjct: 311 LPVGATAMASIASAPPSSSSSFMFLNSLPNPNINILNSSSYSTNPNLYPSPSNNWINPSH 370

Query: 121 SYYHTNNHFQPHDLLKPPEDHKPPLTPESVSAIASDPKFRVAVAAAISSLINKDGQHQDG 180
           SYYHTNNHFQPHDLLKP EDHKPPLTPESVSAIASDPKFRVAVAAAISSLINKDGQHQDG
Sbjct: 371 SYYHTNNHFQPHDLLKPSEDHKPPLTPESVSAIASDPKFRVAVAAAISSLINKDGQHQDG 430

Query: 181 GGE 184
           GGE
Sbjct: 431 GGE 433

[Close]

BLAST of MS012479 vs. NCBI nr
Match: XP_022984384.1 (probable WRKY transcription factor 9 [Cucurbita maxima])

HSP 1 Score: 235.0 bits (598), Expect = 5.3e-58
Identity = 136/192 (70.83%), Postives = 150/192 (78.12%), Query Frame = 0


Query: 1   MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 60
           MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP
Sbjct: 195 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 254

Query: 61  LPVGATAMASTASAPPSSSSSFMFLNSLPNPNINILNSSSYSTNPNLYPSPSNNWINP-- 120
           LPVGATAMASTASA    ++SFM L+S  N N NILNSSSYS NPN  PS +N + +P  
Sbjct: 255 LPVGATAMASTASA----AASFMLLDS-ANTNPNILNSSSYSPNPN-EPS-ANRFYSPLM 314

Query: 121 --------SHSYYHTNNHFQPHDLL--------KPPEDHKPPLTPESVSAIASDPKFRVA 175
                    HS++H N  FQP+ L+         P + +KPPLT ESVSAIASDPKFRVA
Sbjct: 315 ATSSTSDLPHSFFHRN--FQPNHLMGSLHGRSWNPTDGNKPPLTAESVSAIASDPKFRVA 374

[Close]

BLAST of MS012479 vs. NCBI nr
Match: XP_038906408.1 (probable WRKY transcription factor 9 [Benincasa hispida])

HSP 1 Score: 234.6 bits (597), Expect = 6.9e-58
Identity = 137/207 (66.18%), Postives = 153/207 (73.91%), Query Frame = 0


Query: 1   MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 60
           MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP
Sbjct: 240 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 299

Query: 61  LPVGATAMASTASAPPS-----SSSSFMFLNSLPNPNINILNSSSYS------TNPNLY- 120
           LPVGATAMASTASA  S     S+++ + L+SLPNPNI   +SSSYS       NPN + 
Sbjct: 300 LPVGATAMASTASAAASFMHLDSTNNNINLSSLPNPNILNSSSSSYSPTFLQTQNPNNHQ 359

Query: 121 PSPSNNWINP----------SHSYYHTNNHFQPHDLL--------KPPEDHKPPLTPESV 178
           PS +N +  P           HS+ +  N FQP+ L         KP +++KPP TPESV
Sbjct: 360 PSTNNTFYTPLIPTSSTSHFPHSFNYPTN-FQPNHLFNPLHRRTWKPADNNKPPFTPESV 419

[Close]

BLAST of MS012479 vs. NCBI nr
Match: XP_008456102.1 (PREDICTED: probable WRKY transcription factor 9 [Cucumis melo])

HSP 1 Score: 234.6 bits (597), Expect = 6.9e-58
Identity = 141/212 (66.51%), Postives = 157/212 (74.06%), Query Frame = 0


Query: 1   MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 60
           MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP
Sbjct: 261 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 320

Query: 61  LPVGATAMASTASAPPSSSSSFMFLNSLPNPNI----------NILNSSSYS----TNPN 120
           LPVGATAMASTASA   +S+SFM L+S  N N           NILNSSS S     NPN
Sbjct: 321 LPVGATAMASTASA---ASASFMLLDSSNNNNTNLSNSLHQNPNILNSSSPSFLQTQNPN 380

Query: 121 ------LYPSPSNNWINPSHSYYHTNNHFQPHDLL--------KPPEDHK-PPLTPESVS 180
                 L+P+ S +     HS+YH+N  FQP+ L+        KP +D+K PPLTP++VS
Sbjct: 381 NHLFTPLFPTSSTSHF--PHSFYHSN--FQPNHLVSPLDRRTWKPVDDNKPPPLTPDAVS 440

Query: 181 AIASDPKFRVAVAAAISSLINKDGQHQDGGGE 184
           AIASDPKFRVAVAAAISSLINK+ +H    GE
Sbjct: 441 AIASDPKFRVAVAAAISSLINKENEHVTTTGE 465

[Close]

BLAST of MS012479 vs. NCBI nr
Match: XP_022922941.1 (probable WRKY transcription factor 9 [Cucurbita moschata])

HSP 1 Score: 234.2 bits (596), Expect = 9.1e-58
Identity = 136/192 (70.83%), Postives = 151/192 (78.65%), Query Frame = 0


Query: 1   MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 60
           MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP
Sbjct: 200 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 259

Query: 61  LPVGATAMASTASAPPSSSSSFMFLNSLPNPNINILNSSSYSTNPNLYPSPSNNWINPS- 120
           LPVGATAMASTASA    ++SFM L+S  N N NILNSSSYS NPN  PS +N++ +PS 
Sbjct: 260 LPVGATAMASTASA----AASFMLLDS-ANTNPNILNSSSYSPNPN-EPS-ANSFYSPSM 319

Query: 121 ---------HSYYHTNNHFQPHDLL--------KPPEDHKPPLTPESVSAIASDPKFRVA 175
                    HS++H N  FQP+ L+           + +KPPLT ESVSAIASDPKFRVA
Sbjct: 320 ANSSTSDLPHSFFHRN--FQPNHLMGSLHGRSWNATDGNKPPLTAESVSAIASDPKFRVA 379

[Close]

BLAST of MS012479 vs. ExPASy Swiss-Prot
Match: Q9C9F0 (Probable WRKY transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=WRKY9 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 8.3e-38
Identity = 81/117 (69.23%), Postives = 89/117 (76.07%), Query Frame = 0


Query: 1   MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 60
           MNDGCQWRKYGQK AKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP
Sbjct: 234 MNDGCQWRKYGQKTAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 293

Query: 61  LPVGATAMASTASAPPSSSSSFMFLNSLPNPNINILNSSSYSTNPNLYPSPSNNWIN 118
           LPVGATAMASTAS  P     F+ L+S  N +      +  + + +L   P N+  N
Sbjct: 294 LPVGATAMASTASTSP-----FLLLDSSDNLSHPSYYQTPQAIDSSLITYPQNSSYN 345

[Close]

BLAST of MS012479 vs. ExPASy Swiss-Prot
Match: Q9LXG8 (Probable WRKY transcription factor 72 OS=Arabidopsis thaliana OX=3702 GN=WRKY72 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.5e-36
Identity = 101/246 (41.06%), Postives = 126/246 (51.22%), Query Frame = 0


Query: 1   MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 60
           MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRC +DMSILITTYEGTH+H 
Sbjct: 226 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCADDMSILITTYEGTHSHS 285

Query: 61  LPVGATAMASTASA---------------------------------------------- 120
           LP+ AT MAST SA                                              
Sbjct: 286 LPLSATTMASTTSAAASMLLSGSSSSPAAEMIGNNLYDNSRFNNNNKSFYSPTLHSPLHP 345

Query: 121 -----------PPSSSSSFMFLN---------SLPNPNINILNSSSYSTNPNLYPSPS-- 179
                        SSSSS + LN           P+ ++N  ++SS S+NP+    P+  
Sbjct: 346 TVTLDLTAPQHSSSSSSSLLSLNFNKFSNSFQRFPSTSLNFSSTSSTSSNPSTLNLPAIW 405

[Close]

BLAST of MS012479 vs. ExPASy Swiss-Prot
Match: D8VNC6 (WRKY transcription factor 72B OS=Solanum lycopersicum OX=4081 GN=WRKY72B PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.9e-36
Identity = 82/157 (52.23%), Postives = 104/157 (66.24%), Query Frame = 0


Query: 1   MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 60
           MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAP CPVRKQVQRC EDMSILITTYEGTHNH 
Sbjct: 278 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPNCPVRKQVQRCAEDMSILITTYEGTHNHT 337

Query: 61  LPVGATAMASTASAPPSSSSSFMFLNSLPNPNINILNSSSYSTNPNLYPSPSNNWINPSH 120
           LP+ ATAMAST SA  S   S    +S PNP +    +++ +T  +   +  N +++ + 
Sbjct: 338 LPLSATAMASTTSAAASMLLSGSSNSSDPNPQVTATTTTTPTTTTSANINGLNFYLSDTS 397

Query: 121 SYYHTNNHFQPHDLLKPPEDHKPPLTPESVSAIASDP 158
            ++ +  +F    +     +  P +T +  S  +S P
Sbjct: 398 KHHKSPYYFPNSSISASAPNSLPTITLDLTSTSSSSP 434

[Close]

BLAST of MS012479 vs. ExPASy Swiss-Prot
Match: A0A3Q7GFB5 (WRKY transcription factor 72A OS=Solanum lycopersicum OX=4081 GN=WRKY72A PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 3.8e-35
Identity = 107/257 (41.63%), Postives = 136/257 (52.92%), Query Frame = 0


Query: 1   MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 60
           MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAP CPVRKQVQRC++DMSILITTYEGTHNHP
Sbjct: 237 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPNCPVRKQVQRCIQDMSILITTYEGTHNHP 296

Query: 61  LPVGATAMASTASA---------------PPSSSSS-------FMFL-NSLPNPNINI-- 120
           LP  AT+MA T SA               P SS++S       + F  NS PNP  N+  
Sbjct: 297 LPHSATSMAFTTSAAASMLLSGSSSSGSGPTSSTASATTSALNYCFSDNSKPNPFYNLPH 356

Query: 121 --LNSSSYS--------------------------TNPNLYPSPSNN------------- 178
             ++SSS+S                           N N YP   NN             
Sbjct: 357 SSISSSSHSQYPTITLDLTSNSSTSSFPGQNYRTIANSNNYPPRYNNNNSSTNILNFSSF 416

[Close]

BLAST of MS012479 vs. ExPASy Swiss-Prot
Match: Q8VWV6 (Probable WRKY transcription factor 61 OS=Arabidopsis thaliana OX=3702 GN=WRKY61 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.1e-33
Identity = 88/167 (52.69%), Postives = 101/167 (60.48%), Query Frame = 0


Query: 1   MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 60
           MNDGCQWRKYGQKIAKGNPCPRAYYRCT+A  CPVRKQVQRC EDMSILI+TYEGTHNHP
Sbjct: 190 MNDGCQWRKYGQKIAKGNPCPRAYYRCTIAASCPVRKQVQRCSEDMSILISTYEGTHNHP 249

Query: 61  LPVGATAMASTASA--------PPSSSSSFMFLNSL----------PNPNINILNSSSYS 120
           LP+ ATAMAS  SA          SSSS+   L+ L          P P  + L S S S
Sbjct: 250 LPMSATAMASATSAAASMLLSGASSSSSAAADLHGLNFSLSGNNITPKPKTHFLQSPSSS 309

Query: 121 TNP--------------------NLYPSPSNNWINPSHSYYHTNNHF 130
            +P                    N + SP +N ++ S+SY  TN +F
Sbjct: 310 GHPTVTLDLTTSSSSQQPFLSMLNRFSSPPSN-VSRSNSYPSTNLNF 355

[Close]

BLAST of MS012479 vs. ExPASy TrEMBL
Match: A0A6J1D728 (probable WRKY transcription factor 9 OS=Momordica charantia OX=3673 GN=LOC111017647 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 5.1e-99
Identity = 181/183 (98.91%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 1   MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 60
           MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP
Sbjct: 251 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 310

Query: 61  LPVGATAMASTASAPPSSSSSFMFLNSLPNPNINILNSSSYSTNPNLYPSPSNNWINPSH 120
           LPVGATAMAS ASAPPSSSSSFMFLNSLPNPNINILNSSSYSTNPNLYPSPSNNWINPSH
Sbjct: 311 LPVGATAMASIASAPPSSSSSFMFLNSLPNPNINILNSSSYSTNPNLYPSPSNNWINPSH 370

Query: 121 SYYHTNNHFQPHDLLKPPEDHKPPLTPESVSAIASDPKFRVAVAAAISSLINKDGQHQDG 180
           SYYHTNNHFQPHDLLKP EDHKPPLTPESVSAIASDPKFRVAVAAAISSLINKDGQHQDG
Sbjct: 371 SYYHTNNHFQPHDLLKPSEDHKPPLTPESVSAIASDPKFRVAVAAAISSLINKDGQHQDG 430

Query: 181 GGE 184
           GGE
Sbjct: 431 GGE 433

[Close]

BLAST of MS012479 vs. ExPASy TrEMBL
Match: A0A6J1JAC6 (probable WRKY transcription factor 9 OS=Cucurbita maxima OX=3661 GN=LOC111482700 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.6e-58
Identity = 136/192 (70.83%), Postives = 150/192 (78.12%), Query Frame = 0


Query: 1   MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 60
           MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP
Sbjct: 195 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 254

Query: 61  LPVGATAMASTASAPPSSSSSFMFLNSLPNPNINILNSSSYSTNPNLYPSPSNNWINP-- 120
           LPVGATAMASTASA    ++SFM L+S  N N NILNSSSYS NPN  PS +N + +P  
Sbjct: 255 LPVGATAMASTASA----AASFMLLDS-ANTNPNILNSSSYSPNPN-EPS-ANRFYSPLM 314

Query: 121 --------SHSYYHTNNHFQPHDLL--------KPPEDHKPPLTPESVSAIASDPKFRVA 175
                    HS++H N  FQP+ L+         P + +KPPLT ESVSAIASDPKFRVA
Sbjct: 315 ATSSTSDLPHSFFHRN--FQPNHLMGSLHGRSWNPTDGNKPPLTAESVSAIASDPKFRVA 374

[Close]

BLAST of MS012479 vs. ExPASy TrEMBL
Match: A0A1S3C2F5 (probable WRKY transcription factor 9 OS=Cucumis melo OX=3656 GN=LOC103496139 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 3.4e-58
Identity = 141/212 (66.51%), Postives = 157/212 (74.06%), Query Frame = 0


Query: 1   MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 60
           MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP
Sbjct: 261 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 320

Query: 61  LPVGATAMASTASAPPSSSSSFMFLNSLPNPNI----------NILNSSSYS----TNPN 120
           LPVGATAMASTASA   +S+SFM L+S  N N           NILNSSS S     NPN
Sbjct: 321 LPVGATAMASTASA---ASASFMLLDSSNNNNTNLSNSLHQNPNILNSSSPSFLQTQNPN 380

Query: 121 ------LYPSPSNNWINPSHSYYHTNNHFQPHDLL--------KPPEDHK-PPLTPESVS 180
                 L+P+ S +     HS+YH+N  FQP+ L+        KP +D+K PPLTP++VS
Sbjct: 381 NHLFTPLFPTSSTSHF--PHSFYHSN--FQPNHLVSPLDRRTWKPVDDNKPPPLTPDAVS 440

Query: 181 AIASDPKFRVAVAAAISSLINKDGQHQDGGGE 184
           AIASDPKFRVAVAAAISSLINK+ +H    GE
Sbjct: 441 AIASDPKFRVAVAAAISSLINKENEHVTTTGE 465

[Close]

BLAST of MS012479 vs. ExPASy TrEMBL
Match: A0A6J1E5H7 (probable WRKY transcription factor 9 OS=Cucurbita moschata OX=3662 GN=LOC111430769 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 4.4e-58
Identity = 136/192 (70.83%), Postives = 151/192 (78.65%), Query Frame = 0


Query: 1   MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 60
           MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP
Sbjct: 200 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 259

Query: 61  LPVGATAMASTASAPPSSSSSFMFLNSLPNPNINILNSSSYSTNPNLYPSPSNNWINPS- 120
           LPVGATAMASTASA    ++SFM L+S  N N NILNSSSYS NPN  PS +N++ +PS 
Sbjct: 260 LPVGATAMASTASA----AASFMLLDS-ANTNPNILNSSSYSPNPN-EPS-ANSFYSPSM 319

Query: 121 ---------HSYYHTNNHFQPHDLL--------KPPEDHKPPLTPESVSAIASDPKFRVA 175
                    HS++H N  FQP+ L+           + +KPPLT ESVSAIASDPKFRVA
Sbjct: 320 ANSSTSDLPHSFFHRN--FQPNHLMGSLHGRSWNATDGNKPPLTAESVSAIASDPKFRVA 379

[Close]

BLAST of MS012479 vs. ExPASy TrEMBL
Match: E7CEW8 (WRKY protein OS=Cucumis sativus OX=3659 GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 8.3e-57
Identity = 133/206 (64.56%), Postives = 151/206 (73.30%), Query Frame = 0


Query: 1   MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 60
           MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP
Sbjct: 103 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 162

Query: 61  LPVGATAMASTASAPPSSSSSFMFLNSLPNPNINILNSSSYSTNPNLYPS---------- 120
           LPVGATAMASTASA   +S+SFM L+S    N N+  S+S   NPN+  S          
Sbjct: 163 LPVGATAMASTASA---ASASFMLLDSSNTNNTNL--SNSLHLNPNILNSSSPSFLQTQN 222

Query: 121 PSNNWINP----------SHSYYHTNNHFQPHDLL--------KPPEDHK-PPLTPESVS 178
           P+N+   P           HS+YH+N  FQP+ L+        KP +D+K PP TP++VS
Sbjct: 223 PTNHLFTPLFPTSSTSHFPHSFYHSN--FQPNHLVGPLDRRTWKPTDDNKPPPFTPDAVS 282

[Close]

BLAST of MS012479 vs. TAIR 10
Match: AT1G68150.1 (WRKY DNA-binding protein 9 )

HSP 1 Score: 158.3 bits (399), Expect = 5.9e-39
Identity = 81/117 (69.23%), Postives = 89/117 (76.07%), Query Frame = 0


Query: 1   MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 60
           MNDGCQWRKYGQK AKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP
Sbjct: 234 MNDGCQWRKYGQKTAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 293

Query: 61  LPVGATAMASTASAPPSSSSSFMFLNSLPNPNINILNSSSYSTNPNLYPSPSNNWIN 118
           LPVGATAMASTAS  P     F+ L+S  N +      +  + + +L   P N+  N
Sbjct: 294 LPVGATAMASTASTSP-----FLLLDSSDNLSHPSYYQTPQAIDSSLITYPQNSSYN 345

[Close]

BLAST of MS012479 vs. TAIR 10
Match: AT5G15130.1 (WRKY DNA-binding protein 72 )

HSP 1 Score: 152.5 bits (384), Expect = 3.2e-37
Identity = 101/246 (41.06%), Postives = 126/246 (51.22%), Query Frame = 0


Query: 1   MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 60
           MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRC +DMSILITTYEGTH+H 
Sbjct: 226 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCADDMSILITTYEGTHSHS 285

Query: 61  LPVGATAMASTASA---------------------------------------------- 120
           LP+ AT MAST SA                                              
Sbjct: 286 LPLSATTMASTTSAAASMLLSGSSSSPAAEMIGNNLYDNSRFNNNNKSFYSPTLHSPLHP 345

Query: 121 -----------PPSSSSSFMFLN---------SLPNPNINILNSSSYSTNPNLYPSPS-- 179
                        SSSSS + LN           P+ ++N  ++SS S+NP+    P+  
Sbjct: 346 TVTLDLTAPQHSSSSSSSLLSLNFNKFSNSFQRFPSTSLNFSSTSSTSSNPSTLNLPAIW 405

[Close]

BLAST of MS012479 vs. TAIR 10
Match: AT1G18860.1 (WRKY DNA-binding protein 61 )

HSP 1 Score: 143.7 bits (361), Expect = 1.5e-34
Identity = 88/167 (52.69%), Postives = 101/167 (60.48%), Query Frame = 0


Query: 1   MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 60
           MNDGCQWRKYGQKIAKGNPCPRAYYRCT+A  CPVRKQVQRC EDMSILI+TYEGTHNHP
Sbjct: 190 MNDGCQWRKYGQKIAKGNPCPRAYYRCTIAASCPVRKQVQRCSEDMSILISTYEGTHNHP 249

Query: 61  LPVGATAMASTASA--------PPSSSSSFMFLNSL----------PNPNINILNSSSYS 120
           LP+ ATAMAS  SA          SSSS+   L+ L          P P  + L S S S
Sbjct: 250 LPMSATAMASATSAAASMLLSGASSSSSAAADLHGLNFSLSGNNITPKPKTHFLQSPSSS 309

Query: 121 TNP--------------------NLYPSPSNNWINPSHSYYHTNNHF 130
            +P                    N + SP +N ++ S+SY  TN +F
Sbjct: 310 GHPTVTLDLTTSSSSQQPFLSMLNRFSSPPSN-VSRSNSYPSTNLNF 355

[Close]

BLAST of MS012479 vs. TAIR 10
Match: AT4G22070.1 (WRKY DNA-binding protein 31 )

HSP 1 Score: 142.1 bits (357), Expect = 4.4e-34
Identity = 102/227 (44.93%), Postives = 120/227 (52.86%), Query Frame = 0


Query: 1   MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 60
           ++DGCQWRKYGQK+AKGNPCPRAYYRCT+A GCPVRKQVQRC ED SILITTYEG HNHP
Sbjct: 296 ISDGCQWRKYGQKMAKGNPCPRAYYRCTMAGGCPVRKQVQRCAEDRSILITTYEGNHNHP 355

Query: 61  LPVGATAMASTASAP---------------------------PSSSSSFMFLNSLPNPNI 120
           LP  ATAMAST +A                            P SSS      S P P I
Sbjct: 356 LPPAATAMASTTTAAASMLLSGSMSSQDGLMNPTNLLARAILPCSSSMATISASAPFPTI 415

Query: 121 NI-LNSSSYSTNPN------LYPSPSNNWINPS-------HSYYHTNNHFQPHDLLKPPE 180
            + L +S    NPN      L         NP+        + Y+     +   L  P +
Sbjct: 416 TLDLTNSPNGNNPNMTTNNPLMQFAQRPGFNPAVLPQVVGQAMYNNQQQSKFSGLQLPAQ 475

[Close]

BLAST of MS012479 vs. TAIR 10
Match: AT1G62300.1 (WRKY family transcription factor )

HSP 1 Score: 139.8 bits (351), Expect = 2.2e-33
Identity = 99/243 (40.74%), Postives = 125/243 (51.44%), Query Frame = 0


Query: 1   MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHP 60
           ++DGCQWRKYGQK+AKGNPCPRAYYRCT+A GCPVRKQVQRC ED SILITTYEG HNHP
Sbjct: 311 ISDGCQWRKYGQKMAKGNPCPRAYYRCTMATGCPVRKQVQRCAEDRSILITTYEGNHNHP 370

Query: 61  LPVGATAMASTASAPPSS--SSSFMFLNSLPNPNINILN------SSSYSTNPNLYPSPS 120
           LP  A AMAST +A  +   S S    + + NP  N+L       S+S +T     P P+
Sbjct: 371 LPPAAVAMASTTTAAANMLLSGSMSSHDGMMNPT-NLLARAVLPCSTSMATISASAPFPT 430

Query: 121 -----------NNWINPSHSYYHTNNHFQPHDLLKPPEDHKPPLT--------------- 180
                       N  NPS S    NNH   + L++ P+  +  +T               
Sbjct: 431 VTLDLTHSPPPPNGSNPSSSAATNNNH---NSLMQRPQQQQQQMTNLPPGMLPHVIGQAL 490

Query: 181 ---------------------------PESVSAIASDPKFRVAVAAAISSLINKDGQHQD 183
                                       ++++A+ +DP F  A+AA ISS+IN    H D
Sbjct: 491 YNQSKFSGLQFSGGSPSTAAFSQSHAVADTITALTADPNFTAALAAVISSMIN-GTNHHD 548

The following BLAST results are available for this feature:

BLAST of MS012479 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149157.1	1.1e-98	98.91	probable WRKY transcription factor 9 [Momordica charantia]	[more]
XP_022984384.1	5.3e-58	70.83	probable WRKY transcription factor 9 [Cucurbita maxima]	[more]
XP_038906408.1	6.9e-58	66.18	probable WRKY transcription factor 9 [Benincasa hispida]	[more]
XP_008456102.1	6.9e-58	66.51	PREDICTED: probable WRKY transcription factor 9 [Cucumis melo]	[more]
XP_022922941.1	9.1e-58	70.83	probable WRKY transcription factor 9 [Cucurbita moschata]	[more]

BLAST of MS012479 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9F0	8.3e-38	69.23	Probable WRKY transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=WRKY9 PE...	[more]
Q9LXG8	4.5e-36	41.06	Probable WRKY transcription factor 72 OS=Arabidopsis thaliana OX=3702 GN=WRKY72 ...	[more]
D8VNC6	5.9e-36	52.23	WRKY transcription factor 72B OS=Solanum lycopersicum OX=4081 GN=WRKY72B PE=2 SV...	[more]
A0A3Q7GFB5	3.8e-35	41.63	WRKY transcription factor 72A OS=Solanum lycopersicum OX=4081 GN=WRKY72A PE=2 SV...	[more]
Q8VWV6	2.1e-33	52.69	Probable WRKY transcription factor 61 OS=Arabidopsis thaliana OX=3702 GN=WRKY61 ...	[more]

BLAST of MS012479 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D728	5.1e-99	98.91	probable WRKY transcription factor 9 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1JAC6	2.6e-58	70.83	probable WRKY transcription factor 9 OS=Cucurbita maxima OX=3661 GN=LOC111482700...	[more]
A0A1S3C2F5	3.4e-58	66.51	probable WRKY transcription factor 9 OS=Cucumis melo OX=3656 GN=LOC103496139 PE=...	[more]
A0A6J1E5H7	4.4e-58	70.83	probable WRKY transcription factor 9 OS=Cucurbita moschata OX=3662 GN=LOC1114307...	[more]
E7CEW8	8.3e-57	64.56	WRKY protein OS=Cucumis sativus OX=3659 GN=WRKY19 PE=2 SV=1	[more]

BLAST of MS012479 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68150.1	5.9e-39	69.23	WRKY DNA-binding protein 9	[more]
AT5G15130.1	3.2e-37	41.06	WRKY DNA-binding protein 72	[more]
AT1G18860.1	1.5e-34	52.69	WRKY DNA-binding protein 61	[more]
AT4G22070.1	4.4e-34	44.93	WRKY DNA-binding protein 31	[more]
AT1G62300.1	2.2e-33	40.74	WRKY family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 1..61 e-value: 3.2E-37 score: 139.6
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 2..60 e-value: 3.8E-25 score: 87.9
IPR003657	WRKY domain	PROSITE	PS50811	WRKY	coord: 1..62 score: 29.183645
IPR036576	WRKY domain superfamily	GENE3D	2.20.25.80	WRKY domain	coord: 1..63 e-value: 4.5E-31 score: 108.5
IPR036576	WRKY domain superfamily	SUPERFAMILY	118290	WRKY DNA-binding domain	coord: 1..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..150
None	No IPR available	PANTHER	PTHR31429:SF54	WRKY TRANSCRIPTION FACTOR 9-RELATED	coord: 1..127 coord: 111..178
IPR044810	WRKY transcription factor, plant	PANTHER	PTHR31429	WRKY TRANSCRIPTION FACTOR 36-RELATED	coord: 111..178
IPR044810	WRKY transcription factor, plant	PANTHER	PTHR31429	WRKY TRANSCRIPTION FACTOR 36-RELATED	coord: 1..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012479.1	MS012479.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding