MS012402 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTGGAAGAAATTTGCTTTGGTGGCGATTGTGGGGATGTTGCTGATGGGCGCCTCGGCGCAGGCTGGCGGCGCCGAAACGGTGGCGACCGAAATCCAAGGACGGCCAAGAAGGATGATGAGAGGAGGAATATGCCCAAGAATCCTTATGAAGTGCAAAAAGACCTCCGACTGTATGGCTCAGTGCAAGTGCCTCTCCAACGGCTTTTGTGGC ATGGGGTGGAAGAAATTTGCTTTGGTGGCGATTGTGGGGATGTTGCTGATGGGCGCCTCGGCGCAGGCTGGCGGCGCCGAAACGGTGGCGACCGAAATCCAAGGACGGCCAAGAAGGATGATGAGAGGAGGAATATGCCCAAGAATCCTTATGAAGTGCAAAAAGACCTCCGACTGTATGGCTCAGTGCAAGTGCCTCTCCAACGGCTTTTGTGGC ATGGGGTGGAAGAAATTTGCTTTGGTGGCGATTGTGGGGATGTTGCTGATGGGCGCCTCGGCGCAGGCTGGCGGCGCCGAAACGGTGGCGACCGAAATCCAAGGACGGCCAAGAAGGATGATGAGAGGAGGAATATGCCCAAGAATCCTTATGAAGTGCAAAAAGACCTCCGACTGTATGGCTCAGTGCAAGTGCCTCTCCAACGGCTTTTGTGGC MGWKKFALVAIVGMLLMGASAQAGGAETVATEIQGRPRRMMRGGICPRILMKCKKTSDCMAQCKCLSNGFCG Homology
BLAST of MS012402 vs. NCBI nr
Match: KAG6576915.1 (hypothetical protein SDJN03_24489, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 68.6 bits (166), Expect = 2.6e-08 Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 0
BLAST of MS012402 vs. NCBI nr
Match: KAG7014942.1 (hypothetical protein SDJN02_22573, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 68.6 bits (166), Expect = 2.6e-08 Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 0
BLAST of MS012402 vs. NCBI nr
Match: XP_023552845.1 (uncharacterized protein LOC111810370 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 66.2 bits (160), Expect = 1.3e-07 Identity = 38/79 (48.10%), Postives = 49/79 (62.03%), Query Frame = 0
BLAST of MS012402 vs. NCBI nr
Match: XP_022984819.1 (trypsin inhibitor 1-like [Cucurbita maxima]) HSP 1 Score: 65.5 bits (158), Expect = 2.2e-07 Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 0
BLAST of MS012402 vs. NCBI nr
Match: KAG6576914.1 (hypothetical protein SDJN03_24488, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 63.5 bits (153), Expect = 8.3e-07 Identity = 35/81 (43.21%), Postives = 48/81 (59.26%), Query Frame = 0
BLAST of MS012402 vs. ExPASy Swiss-Prot
Match: P34950 (Trypsin inhibitor 5 OS=Luffa aegyptiaca OX=3670 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 4.6e-08 Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 0
BLAST of MS012402 vs. ExPASy Swiss-Prot
Match: P07853 (Trypsin inhibitor 4 OS=Cucurbita maxima OX=3661 PE=1 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 8.6e-07 Identity = 20/28 (71.43%), Postives = 25/28 (89.29%), Query Frame = 0
BLAST of MS012402 vs. ExPASy Swiss-Prot
Match: P83398 (Trypsin inhibitor 7 OS=Cyclanthera pedata OX=198836 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 1.9e-06 Identity = 21/28 (75.00%), Postives = 24/28 (85.71%), Query Frame = 0
BLAST of MS012402 vs. ExPASy Swiss-Prot
Match: P01074 (Trypsin inhibitor 1 OS=Cucurbita maxima OX=3661 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 2.5e-06 Identity = 19/28 (67.86%), Postives = 25/28 (89.29%), Query Frame = 0
BLAST of MS012402 vs. ExPASy Swiss-Prot
Match: P83397 (Trypsin inhibitor 6 OS=Cyclanthera pedata OX=198836 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 2.5e-06 Identity = 21/28 (75.00%), Postives = 24/28 (85.71%), Query Frame = 0
BLAST of MS012402 vs. ExPASy TrEMBL
Match: A0A6J1JBL8 (trypsin inhibitor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111482991 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.1e-07 Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 0
BLAST of MS012402 vs. ExPASy TrEMBL
Match: A0A0A0KT01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000805 PE=3 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 5.3e-07 Identity = 35/79 (44.30%), Postives = 46/79 (58.23%), Query Frame = 0
BLAST of MS012402 vs. ExPASy TrEMBL
Match: J3R9Z5 (Two inhibitor peptide topologies 3 OS=Momordica cochinchinensis OX=3674 GN=TIPTOP3 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 4.5e-06 Identity = 27/69 (39.13%), Postives = 40/69 (57.97%), Query Frame = 0
BLAST of MS012402 vs. ExPASy TrEMBL
Match: A0A5D3E0W0 (Trypsin inhibitor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00600 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 5.8e-06 Identity = 33/75 (44.00%), Postives = 41/75 (54.67%), Query Frame = 0
BLAST of MS012402 vs. ExPASy TrEMBL
Match: A0A5D3E148 (Trypsin inhibitor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00640 PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.3e-05 Identity = 37/92 (40.22%), Postives = 52/92 (56.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|