MS012376 (gene) Bitter gourd (TR) v1

Overview


Name	MS012376
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Tubulin alpha chain
Location	scaffold63: 286429 .. 290698 (+)
RNA-Seq Expression	MS012376
Synteny	MS012376

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCTTGCAAGTTCTGAAATCGGCCGTCTCTCCACTTTCGATCTCCCAGCCGAATTTTGGCTGCCGATCAAGCCGCTTTCTCTCTCAGTCGGATTCCACGAGGAGGTTTGTGCGGTTCCATGGCCGTCGGAGGAGTTTGAGATATGGTTGCGTTTGTAGAAGGTTGAGTTTCCGCTGCGCTGCTCAGGATGCTGATAAGGAAAGCAATGGCAAGTTTTAACTGCTCTTCTTCTTCTGCTTCTTGCTCTGCCTTCTTTTTGTTCTATGTTTTTTCATTCTCAGTGCATTCGCCTTGCTTGGATCTTGCTGAATTGATGTTCGTTATCGTGAACTTTGTCTTGCTTAATTTCAAAGCGAAACTAACTTGCTTAGATGAGGCAATAGTTCCTGATGTGGTGTTGTTCGTCGGATGGTTCGTCACTCTCACTCCTCAATTATCTTGTTCTATAGACAATCGTGCGAGCATCCGTCCGTCAATTCGTCCGTCATTTCTGGATTGTCTCTCTCAATGCATTTGCCTCGCCCGGATGTCTTGATGAATTGATGTTTGTTATCATTGACTTCCGCGAGACATAGTGAGGCAACTTAAGTAGCTTAGATGAGGCAGGAGTTGCACGGTGTAGTTTGTACTTTGTTGTTCAGATGGTCTGTCACTTCTGAGTTATCTTTATTTTGTCGACAGTGGCAGAATCGTGCGAGATCCATACAACTATTCGTCCATCGTTCCTTAATTCTCATTCTCAGTGCATTTGCCTCACTCTGATGTCTGATGAATTGATGTTCGTTATCGTAGACTTTGTCATGCTTATTTTCAAAGTGAGACATAGATTGGAAAATGCACAGAGAAAGATAGTTCAGGAATGGACGAGTAGCTGGACGGATCTCGCATGATTTTGCTAGATGATTGTGTTACAATCTACGGAGCAAGATAATGGATGTTCGTTATTGTAGCATTCGTCTTGCTTATTATTTTCAAAGAGAGAGGTCACGAATTAGTTTAGAAGAGGCAGAAGTTTCGTAGTGTAGTTTGTTGTTCAGATGGTCCGTCATTCCTGAGTTATCTTGCTCTGTTTAGTTGGCACTCCAATTCTTTAGAGCTTGAGTCAATATAGGCAGCAGCAAAGATTAAATTTAAACCCGGAATCTGAAATTTTAAGCTGGGAATTTTGATGATATTTAACATTTTTTTTAGTAGTAGAGGAAGATTTTCACGTCAAGCTGTTAACCAAAAAACTTTTTTTGTTCAGCCAGCAAACACTTGGCAGAGGGATAAAACCTGTCATTTATCAATATCTGCATAAACCATCACCTGAATCTATAATCTTAGATTATATTGGTCCAATTTTTATAGTTGAAGCTTTTAGGAAGCGACATTCTGTGCCAAGCCAACAGTTGTAATGCCCGTACCTGTACTGAAACTACCTGTATTAGGAGTGCTCGCTGGCTATGCTCCTTTAGATTGTCTGAACAGCTTTTACAATAGGCCATTGCTCCTCCTAGAAGAGTTTTCATTTCGGGCATTGAGTTTTATTCAGCTGGTGCGACAGTGCACAGTTTGCTCTGGCCCTCCTAAAAATAGAGGCTGAGAAGGCTTAAGCTCGTTTCCTATGAAGTTCCTGACAAGTCTGTTTTGTGTCTTCCTACCATGTTGCACCTGGCCTCTCCTTTCTGGGTTCATTATAGAAATAATTTTTACTTATTAGAGCAGAGCTTTTAGAGTTCACCTGATTAGATGTTCCAAGCAAGTTGTATCAACCGTACATTCCCAGAATCCCAATAATTTGTTTCCTATAAATCAAGTTACACGTGCACCGTACCAGAAGACCGTAATGTTGAGTTGTAATATTGAGTCAGGATCTGTTGAAGCTAACTAGAACACTTTCAATTTTGAAGGACTCCTAATGTTTTCTAAGGTTAGAGGAAGTTTTTTGGTCGCTCTCATTTGTCATCGTGTGAACCAATCATGATATGACATGACCATATTATTCCCTGCTTCCCATTTTTCATAGTTTGAATAATTCAAGCATTCTTAGTAGTTTTTCCATTTAGTTTGTGACTAGTAATGGAATATTCAACACCTTATATTATTTGAATTGAATTTATTAAAGAGAGTGTTTCTTTTGGGAGCTCCGATTATGTCTTTTTAAGGTGCTTTACATTATCTTTTGCAGGAGAAGAACCTCCGGAATCATTATTCATGAAGGAACTGAAGAAGAGAGGTTTAACTCCCACCTCCTTGCTTGAGGATAGTAACAGCAATGACTTCGGACTTGGTGGTGAGATGACGGGAGAAGGAAGAGATTTCTCCAGTAGAAGTGCTGTTTCAACTGAAGTTAACAAGAGCCTGTCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGTTAATTTCCTTATGGTTTTATTGGAGTTTATTGAATATGCTGTTCAAATGGCTAAATCCATTTTGTCTGATCTATTTTGTTTTCAATTATTCCCTTGCTCGACGAGTTATGACCAAAATAACCAGACAGGGTGACCAGTTAATGAAATCAATATTCCTGTTCGCCAAGAATTATGAAAACCTGAGCCCATCCAAAACCGAAAGCCTAGACAAATAAGGAATCTACAAAAAATGGTTCCAATCGTTTAGGATCATCCACAACAAAGGGACCACCAAAAACTCTTTGAAGCAAAAGTCTAAAGGTAAGCATTGTAGTGAGCCAAGCTTCAAACATCCCCTCATGTCTCCGTCCCCATAAAAATTATCAGGTTTCTTTCTAACCAACTTCAATGAAAACGAAATAATCCGCCTGCCAAAGAACCTTCCCTTTGTTGCAAAAGAGGATGAAAAACAACCTCCTCCATCAGATCATGAAATGTCTAATTCCCCATAGGCCCAAAATTTTATTCCAAATCTTCTCGGCAAACATGCACTTCAGTGGATTATGATCAAGCTCTTCATACCGTACCATTTAAGTTTAACCACTGAGGACTTCTCAAAAATCCAAAATAGAAGAACTTAGCCAAGAAAAGAGTCGACAGCAAGACCTTCCCAAGTTTAGTGAAAGAAAAAGGGTAAGTGGTTGAGACTGGACAGAAGTATGATTCAGATGCGTAAAAAAGGATTTGCAGTAAACACACTAGAAGATTCACGGGCAAGGAAACCTGGTCGATGTAAAGCACAGAAACCAACTCCCTAGCTTCTCTGTCAAAAAAGTTATCTTGGAAGGGAAGTTAATTTGAACCAAACCCAAAAGAAGAAAAGAAAGAAACTACAAAAAGTTTCTTCATTGAAGAGAGAGATTATAAAGCGGGGAAATAGAGAGTTAAAAATCCAATGCCAATTGAATGGCTAGCCCTCCCGAAAATAAATAATGGAGTCGTTCGGGACTGAAAGATTAGACAATATATAGAATGAGGAATAATAGAACGATCCTTCCCAATAGAAGTTGAAAATAAGTTTATGAACAGTGGTTGGAGGTTTGAAGATTGAAGGTGCTTTTCCTCTTTCTAATACCTCTAGTCCCAAATTTCACCCATCTAATCAGTAGAGAAACACCGACGAATCTGGAAAATATGCTCTTATTGTCTTGCTTAAAATAGAAATCTGGGGTACAAAGCAAAATTTGAGTCTCCTACACATCTCTGGAACCCTATTCTGTTTCCTAACTAAAACCAGGAAATATAACCGAAAACTTCATTTCCAAATTTATGCTCGGTCAAACACAATAAATTCAAACTAGTTAAGATTCATTAATGGTTATACCTTTAAGAGAGAGAAAAGTCTGGCTGTCTCATTGATTTTCCATCTTGAAATCAATTTCTGCTGTTGCTTTTGTACTCTTCCAATTGCAAGTGACTATTATTTCTGCTGCTCCATACTCGAATGATCGGCATTGGTACTCTGGTGTTTAATCGCATATTTTGGTTTCAGGGGTTGATCCCTCGTGCCAAACTTTTGCTAACAATTGGGGGAACATTCTTCTTAGGATTCTGGCCGTTGATCGTCATCACTGTTTCATTCTTTTTTGCTTTATACTTCGTAAGATTTCTCTCTTACTGCTACGATTTCAGTTTAACATTGAAGCTGGACTTTGTGCTTGATTTTAAGATGAAAACTAACGGTTGCAATTGGTATCTATCTCTTGATGCAGTTTTTTGGACCGTCTTTTGTTCATAATGGCGAAACGCCAATATCTCCTCCACCATATGTTGATCCATATGCTCTGTTAGAAGACGAGAGAATTTCGCAAACAGCTCCTCGTGTAAAT

mRNA sequence

ATGGCTGCCTTGCAAGTTCTGAAATCGGCCGTCTCTCCACTTTCGATCTCCCAGCCGAATTTTGGCTGCCGATCAAGCCGCTTTCTCTCTCAGTCGGATTCCACGAGGAGGTTTGTGCGGTTCCATGGCCGTCGGAGGAGTTTGAGATATGGTTGCGTTTGTAGAAGGTTGAGTTTCCGCTGCGCTGCTCAGGATGCTGATAAGGAAAGCAATGGCAAGTGCTTTACATTATCTTTTGCAGGAGAAGAACCTCCGGAATCATTATTCATGAAGGAACTGAAGAAGAGAGGTTTAACTCCCACCTCCTTGCTTGAGGATAGTAACAGCAATGACTTCGGACTTGGTGGTGAGATGACGGGAGAAGGAAGAGATTTCTCCAGTAGAAGTGCTGTTTCAACTGAAGTTAACAAGAGCCTGTCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCCAAACTTTTGCTAACAATTGGGGGAACATTCTTCTTAGGATTCTGGCCGTTGATCGTCATCACTGTTTCATTCTTTTTTGCTTTATACTTCTTTTTTGGACCGTCTTTTGTTCATAATGGCGAAACGCCAATATCTCCTCCACCATATGTTGATCCATATGCTCTGTTAGAAGACGAGAGAATTTCGCAAACAGCTCCTCGTGTAAAT

Coding sequence (CDS)

ATGGCTGCCTTGCAAGTTCTGAAATCGGCCGTCTCTCCACTTTCGATCTCCCAGCCGAATTTTGGCTGCCGATCAAGCCGCTTTCTCTCTCAGTCGGATTCCACGAGGAGGTTTGTGCGGTTCCATGGCCGTCGGAGGAGTTTGAGATATGGTTGCGTTTGTAGAAGGTTGAGTTTCCGCTGCGCTGCTCAGGATGCTGATAAGGAAAGCAATGGCAAGTGCTTTACATTATCTTTTGCAGGAGAAGAACCTCCGGAATCATTATTCATGAAGGAACTGAAGAAGAGAGGTTTAACTCCCACCTCCTTGCTTGAGGATAGTAACAGCAATGACTTCGGACTTGGTGGTGAGATGACGGGAGAAGGAAGAGATTTCTCCAGTAGAAGTGCTGTTTCAACTGAAGTTAACAAGAGCCTGTCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCCAAACTTTTGCTAACAATTGGGGGAACATTCTTCTTAGGATTCTGGCCGTTGATCGTCATCACTGTTTCATTCTTTTTTGCTTTATACTTCTTTTTTGGACCGTCTTTTGTTCATAATGGCGAAACGCCAATATCTCCTCCACCATATGTTGATCCATATGCTCTGTTAGAAGACGAGAGAATTTCGCAAACAGCTCCTCGTGTAAAT

Protein sequence

MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFRCAAQDADKESNGKCFTLSFAGEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTGEGRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFALYFFFGPSFVHNGETPISPPPYVDPYALLEDERISQTAPRVN

Homology

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BLAST of MS012376 vs. NCBI nr
Match: XP_022149320.1 (uncharacterized protein LOC111017763 [Momordica charantia])

HSP 1 Score: 421.8 bits (1083), Expect = 3.8e-114
Identity = 221/230 (96.09%), Postives = 221/230 (96.09%), Query Frame = 0


Query: 1   MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDADKESNGKCFTLSFAGEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTG 120
           CAAQDADKESN         GEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTG
Sbjct: 61  CAAQDADKESN---------GEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTG 120

Query: 121 EGRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV 180
           EGRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV
Sbjct: 121 EGRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV 180

Query: 181 ITVSFFFALYFFFGPSFVHNGETPISPPPYVDPYALLEDERISQTAPRVN 231
           ITVSFFFALYFFFGPSFVHNGETPISPPPYVDPYALLEDERISQTAPRVN
Sbjct: 181 ITVSFFFALYFFFGPSFVHNGETPISPPPYVDPYALLEDERISQTAPRVN 221

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BLAST of MS012376 vs. NCBI nr
Match: XP_038905067.1 (uncharacterized protein LOC120091218 isoform X1 [Benincasa hispida])

HSP 1 Score: 365.9 bits (938), Expect = 2.5e-97
Identity = 195/231 (84.42%), Postives = 205/231 (88.74%), Query Frame = 0


Query: 1   MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQ+LKS VSP SISQPNFG +SSRF S  DSTRRFV  HGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQILKSTVSPPSISQPNFGVQSSRFFSDLDSTRRFVLLHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDADKESNGKCFTLSFAGEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTG 120
           CAAQDADK+SN         GEEPPESLFMKELKKRG+TPTSLLED+N++DFGLGGEMTG
Sbjct: 61  CAAQDADKDSN---------GEEPPESLFMKELKKRGITPTSLLEDTNNSDFGLGGEMTG 120

Query: 121 EGRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV 180
           E RDFS RSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI+
Sbjct: 121 ENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLII 180

Query: 181 ITVSFFFALYFFFGPSFVHNG-ETPISPPPYVDPYALLEDERISQTAPRVN 231
           ITVSFFFALYFFFG SFVH+G  T ISPP YVDPYALLE+ERISQ AP VN
Sbjct: 181 ITVSFFFALYFFFGASFVHDGSRTAISPPSYVDPYALLEEERISQRAPPVN 222

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BLAST of MS012376 vs. NCBI nr
Match: XP_022984914.1 (uncharacterized protein LOC111483048 [Cucurbita maxima])

HSP 1 Score: 363.2 bits (931), Expect = 1.6e-96
Identity = 193/231 (83.55%), Postives = 205/231 (88.74%), Query Frame = 0


Query: 1   MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60
           MA LQ+LKS VSP SISQP FG +SSRF S+ DSTRRFV  HGRRRSLRYGCV RRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFVLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDADKESNGKCFTLSFAGEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTG 120
           CAAQD+DKESN         GEEPPESLFMKELKKRG+TPTSLLED+++ DFGLGGEM G
Sbjct: 61  CAAQDSDKESN---------GEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKG 120

Query: 121 EGRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV 180
           E RDFS RSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV
Sbjct: 121 ENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV 180

Query: 181 ITVSFFFALYFFFGPSFVHNG-ETPISPPPYVDPYALLEDERISQTAPRVN 231
           +TVSFFFALYFF GPSFVH+G +TPISPPPYVDPYALLEDERISQ APRVN
Sbjct: 181 VTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222

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BLAST of MS012376 vs. NCBI nr
Match: KAG6576903.1 (hypothetical protein SDJN03_24477, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 361.7 bits (927), Expect = 4.7e-96
Identity = 192/231 (83.12%), Postives = 204/231 (88.31%), Query Frame = 0


Query: 1   MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60
           MA LQ+LKS VSP SISQP FG +SSRF S+ DSTRRF   HGRRRSLRYGCV RRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDADKESNGKCFTLSFAGEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTG 120
           CAAQD+DKESN         GEEPPESLFMKELKKRG+TPTSLLED+++ DFGLGGEM G
Sbjct: 61  CAAQDSDKESN---------GEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKG 120

Query: 121 EGRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV 180
           E RDFS RSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV
Sbjct: 121 ENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV 180

Query: 181 ITVSFFFALYFFFGPSFVHNG-ETPISPPPYVDPYALLEDERISQTAPRVN 231
           +TVSFFFALYFF GPSFVH+G +TPISPPPYVDPYALLEDERISQ APRVN
Sbjct: 181 VTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222

[Close]

BLAST of MS012376 vs. NCBI nr
Match: XP_023552655.1 (uncharacterized protein LOC111810239 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360.9 bits (925), Expect = 8.1e-96
Identity = 192/231 (83.12%), Postives = 204/231 (88.31%), Query Frame = 0


Query: 1   MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60
           MA LQ+LKS VSP SISQP FG +SSRF  + DSTRRFV  HGRRRSLRYGCV RRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFLELDSTRRFVLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDADKESNGKCFTLSFAGEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTG 120
           CAAQD+DKESN         GEEPPESLFMKELKKRG+TPTSLLED+++ DFGLGGEM G
Sbjct: 61  CAAQDSDKESN---------GEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKG 120

Query: 121 EGRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV 180
           E RDFS RSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV
Sbjct: 121 ENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV 180

Query: 181 ITVSFFFALYFFFGPSFVHNG-ETPISPPPYVDPYALLEDERISQTAPRVN 231
           +TVSFFFALYFF GPSFVH+G +TPISPPPYVDPYALLEDERISQ APRVN
Sbjct: 181 VTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222

[Close]

BLAST of MS012376 vs. ExPASy TrEMBL
Match: A0A6J1D5D9 (uncharacterized protein LOC111017763 OS=Momordica charantia OX=3673 GN=LOC111017763 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.9e-114
Identity = 221/230 (96.09%), Postives = 221/230 (96.09%), Query Frame = 0


Query: 1   MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDADKESNGKCFTLSFAGEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTG 120
           CAAQDADKESN         GEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTG
Sbjct: 61  CAAQDADKESN---------GEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTG 120

Query: 121 EGRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV 180
           EGRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV
Sbjct: 121 EGRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV 180

Query: 181 ITVSFFFALYFFFGPSFVHNGETPISPPPYVDPYALLEDERISQTAPRVN 231
           ITVSFFFALYFFFGPSFVHNGETPISPPPYVDPYALLEDERISQTAPRVN
Sbjct: 181 ITVSFFFALYFFFGPSFVHNGETPISPPPYVDPYALLEDERISQTAPRVN 221

[Close]

BLAST of MS012376 vs. ExPASy TrEMBL
Match: A0A6J1JBV1 (uncharacterized protein LOC111483048 OS=Cucurbita maxima OX=3661 GN=LOC111483048 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 7.9e-97
Identity = 193/231 (83.55%), Postives = 205/231 (88.74%), Query Frame = 0


Query: 1   MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60
           MA LQ+LKS VSP SISQP FG +SSRF S+ DSTRRFV  HGRRRSLRYGCV RRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFVLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDADKESNGKCFTLSFAGEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTG 120
           CAAQD+DKESN         GEEPPESLFMKELKKRG+TPTSLLED+++ DFGLGGEM G
Sbjct: 61  CAAQDSDKESN---------GEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKG 120

Query: 121 EGRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV 180
           E RDFS RSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV
Sbjct: 121 ENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV 180

Query: 181 ITVSFFFALYFFFGPSFVHNG-ETPISPPPYVDPYALLEDERISQTAPRVN 231
           +TVSFFFALYFF GPSFVH+G +TPISPPPYVDPYALLEDERISQ APRVN
Sbjct: 181 VTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERISQMAPRVN 222

[Close]

BLAST of MS012376 vs. ExPASy TrEMBL
Match: A0A6J1E457 (uncharacterized protein LOC111430640 OS=Cucurbita moschata OX=3662 GN=LOC111430640 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 5.1e-96
Identity = 191/231 (82.68%), Postives = 204/231 (88.31%), Query Frame = 0


Query: 1   MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60
           MA LQ+LKS VSP SISQP FG +SSRF S+ DSTRRF   HGRRRSLRYGCV RRLSFR
Sbjct: 1   MAVLQILKSTVSPPSISQPKFGSQSSRFFSELDSTRRFTLLHGRRRSLRYGCVRRRLSFR 60

Query: 61  CAAQDADKESNGKCFTLSFAGEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTG 120
           CAAQD+DKESN         GEEPPESLFMKELKKRG+TPTSLLED+++ DFGLGGEM G
Sbjct: 61  CAAQDSDKESN---------GEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKG 120

Query: 121 EGRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV 180
           E RDFS RSAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV
Sbjct: 121 ENRDFSRRSAVSTEVDKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV 180

Query: 181 ITVSFFFALYFFFGPSFVHNG-ETPISPPPYVDPYALLEDERISQTAPRVN 231
           +TVSFFFALYFF GPSFVH+G +TPISPPPYVDPYALLEDER+SQ APRVN
Sbjct: 181 VTVSFFFALYFFLGPSFVHDGTKTPISPPPYVDPYALLEDERMSQMAPRVN 222

[Close]

BLAST of MS012376 vs. ExPASy TrEMBL
Match: A0A1S3BY38 (uncharacterized protein LOC103494832 OS=Cucumis melo OX=3656 GN=LOC103494832 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.3e-91
Identity = 183/230 (79.57%), Postives = 198/230 (86.09%), Query Frame = 0


Query: 1   MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60
           MA+LQ+LKS +S  SIS PNFG +S+RF S  DS    +  HGRRRSLR  CVCRR SFR
Sbjct: 1   MASLQILKSTLSLPSISHPNFGSQSTRFFSDFDS----LLLHGRRRSLRVACVCRRFSFR 60

Query: 61  CAAQDADKESNGKCFTLSFAGEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTG 120
           CAA+DADKESN         GEEPPESLFMKELKKRG+TPTSLLED+N++DFGLGGEMTG
Sbjct: 61  CAAKDADKESN---------GEEPPESLFMKELKKRGITPTSLLEDTNNSDFGLGGEMTG 120

Query: 121 EGRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV 180
           E RDFS RSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLI+
Sbjct: 121 ENRDFSRRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLII 180

Query: 181 ITVSFFFALYFFFGPSFVHNGETPISPPPYVDPYALLEDERISQTAPRVN 231
           ITVSFFF LYFFFG SF+H+G+TPISPPPYVDPYALLEDERISQ AP VN
Sbjct: 181 ITVSFFFGLYFFFGSSFIHDGKTPISPPPYVDPYALLEDERISQIAPPVN 217

[Close]

BLAST of MS012376 vs. ExPASy TrEMBL
Match: A0A6J1JUF8 (uncharacterized protein LOC111488465 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488465 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 7.1e-90
Identity = 183/231 (79.22%), Postives = 198/231 (85.71%), Query Frame = 0


Query: 1   MAALQVLKSAVSPLSISQPNFGCRSSRFLSQSDSTRRFVRFHGRRRSLRYGCVCRRLSFR 60
           MAALQ+LKS VS LS SQ +FG +SSRF ++ DS+RR VRFHGRRRSLRYGCVCRRLSFR
Sbjct: 1   MAALQILKSTVSTLSFSQTSFGVQSSRFFTELDSSRRSVRFHGRRRSLRYGCVCRRLSFR 60

Query: 61  CAAQDADKESNGKCFTLSFAGEEPPESLFMKELKKRGLTPTSLLEDSNSNDFGLGGEMTG 120
           CAAQD+ KESN         GEEPPESLFMKELKKRG+TPTSLLED+ S +F LGGE TG
Sbjct: 61  CAAQDSHKESN---------GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTG 120

Query: 121 EGRDFSSRSAVSTEVNKSLSNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIV 180
           E  DFS  SAVSTEV+KSLSNQRERSMQLNSEGLEGLIPRAKLLLT+GGTFFLGFWPLIV
Sbjct: 121 ENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIV 180

Query: 181 ITVSFFFALYFFFGPSFVHNG-ETPISPPPYVDPYALLEDERISQTAPRVN 231
           ITV+FFFA YFFFG SFVH+G +TP SPPPYV PYA LEDERISQ APRVN
Sbjct: 181 ITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN 222

[Close]

BLAST of MS012376 vs. TAIR 10
Match: AT1G50020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 184.5 bits (467), Expect = 9.6e-47
Identity = 100/152 (65.79%), Postives = 118/152 (77.63%), Query Frame = 0


Query: 81  GEEPPESLFMKELKKRGLTPTSLLEDSN-SNDFGLGGEMTGEGRDFSSRSAVSTEVNKSL 140
           GEEPPESLFMKELK+RG+TPTSLL+D     D    G+ TG     S  +A +   +KSL
Sbjct: 61  GEEPPESLFMKELKRRGMTPTSLLQDYEVDQDEIKTGKETGNS---SKTTATTPAFDKSL 120

Query: 141 SNQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVITVSFFFALYFFFGPSFVH 200
            NQRERS+ LNSEGLEGLIPRA++LLTIGGTFFLGFWPLIV+T+  F ALY +FG  F+H
Sbjct: 121 LNQRERSLALNSEGLEGLIPRARILLTIGGTFFLGFWPLIVLTLGAFSALYLYFGADFIH 180

Query: 201 NG-ETPISPPPYVDPYALLEDERISQTAPRVN 231
           +G  TP+SPPPY+DPYALLEDERIS   PR+N
Sbjct: 181 DGSRTPVSPPPYIDPYALLEDERISGMDPRLN 209

The following BLAST results are available for this feature:

BLAST of MS012376 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149320.1	3.8e-114	96.09	uncharacterized protein LOC111017763 [Momordica charantia]	[more]
XP_038905067.1	2.5e-97	84.42	uncharacterized protein LOC120091218 isoform X1 [Benincasa hispida]	[more]
XP_022984914.1	1.6e-96	83.55	uncharacterized protein LOC111483048 [Cucurbita maxima]	[more]
KAG6576903.1	4.7e-96	83.12	hypothetical protein SDJN03_24477, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023552655.1	8.1e-96	83.12	uncharacterized protein LOC111810239 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS012376 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS012376 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5D9	1.9e-114	96.09	uncharacterized protein LOC111017763 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1JBV1	7.9e-97	83.55	uncharacterized protein LOC111483048 OS=Cucurbita maxima OX=3661 GN=LOC111483048...	[more]
A0A6J1E457	5.1e-96	82.68	uncharacterized protein LOC111430640 OS=Cucurbita moschata OX=3662 GN=LOC1114306...	[more]
A0A1S3BY38	1.3e-91	79.57	uncharacterized protein LOC103494832 OS=Cucumis melo OX=3656 GN=LOC103494832 PE=...	[more]
A0A6J1JUF8	7.1e-90	79.22	uncharacterized protein LOC111488465 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of MS012376 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50020.1	9.6e-47	65.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35699	F2J10.10 PROTEIN	coord: 29..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012376.1	MS012376.1	mRNA