MS012344 (gene) Bitter gourd (TR) v1

Overview


Name	MS012344
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Dynamin
Location	scaffold63: 81449 .. 82441 (+)
RNA-Seq Expression	MS012344
Synteny	MS012344

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACGAGCCAGTTCTTCCATCTACGGCGTCGGTTTCTTCTGCTGCTGCTCCCTTCGGCAGCTCCATGATTCCCATAGTTAACAAGCTACAGGTCATCTTCGCTAAGGTCGCTGTTGTTGGCAGTCAGAGCAGCGGCAAGTCCAGGTTCTACGACTTTTCTGAGATTCGGAAGGAATTTCAGGTTAGGTTTCGGCAATATTTTCTTCTAATTTGATCTGTGTTTCGATCTGGAAGGATGTTCCACGGGAGCGTTTAATTTCTGTATAACTGTGGAGATTGGTGTAGATTTTCTGCTCATTCTCTCATCGATTTCGAGGACAAATTAGACAAGATTCCTAAGTACTGATGCCATTCACTTGCATTTACTCTTAGGTCATCGGGTTTCTTATTATCGTCTACTTGTTCAATTAGTGGTTGATTATTCATCGTTTTCAATGTCATTTTTGATCGGGATGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTCAAGAGCAATGATGTAAAATGATTTTTGGTATTGTTGTATAGTTTGAGACTGAGAGAGAAGCAGGTGGAAACAAAGGTGTCTCGGACAAGCAGATCCGGTTAAAGATTTTCTCCCAAAATGTTCTTGACATCACACTTGTTGATTTGCCTAGCATTACAAAAGTTCTCTCCAACGGACTAAGGTTTGGAGTCTCTTGGTCTGACTTAGAAATCTCAACTTCGAACATTCTGGTGAGTTTAATACTAAAAACTCTAGATGTACCTTAGGTACGGGCCTTGGAGCTGGTGTGGGTACCCCTGGTTATAGGGGAGCAAAACTCCGACTCCCAATTATAAAAAAAAAATAAGAGTTTCGGTCGAAGACCAGCCTTCTGACATTGAAGCAAGAATTAGGACAATGAGCTGTTTAATTCTTGCTGCTACACCAGCAAATTCTGATTTAGCTAACTCATATGCTCTTCAGATTGCAGGAAAGGCTGATCCTGATGGT

mRNA sequence

ATGGCGGACGAGCCAGTTCTTCCATCTACGGCGTCGGTTTCTTCTGCTGCTGCTCCCTTCGGCAGCTCCATGATTCCCATAGTTAACAAGCTACAGGTCATCTTCGCTAAGGTCGCTGTTGTTGGCAGTCAGAGCAGCGGCAAGTCCAGGTTCTACGACTTTTCTGAGATTCGGAAGGAATTTCAGTTTGAGACTGAGAGAGAAGCAGGTGGAAACAAAGGTGTCTCGGACAAGCAGATCCGGTTAAAGATTTTCTCCCAAAATGTTCTTGACATCACACTTGTTGATTTGCCTAGCATTACAAAAGTTCTCTCCAACGGACTAAGAGTTTCGGTCGAAGACCAGCCTTCTGACATTGAAGCAAGAATTAGGACAATGAGCTGTTTAATTCTTGCTGCTACACCAGCAAATTCTGATTTAGCTAACTCATATGCTCTTCAGATTGCAGGAAAGGCTGATCCTGATGGT

Coding sequence (CDS)

ATGGCGGACGAGCCAGTTCTTCCATCTACGGCGTCGGTTTCTTCTGCTGCTGCTCCCTTCGGCAGCTCCATGATTCCCATAGTTAACAAGCTACAGGTCATCTTCGCTAAGGTCGCTGTTGTTGGCAGTCAGAGCAGCGGCAAGTCCAGGTTCTACGACTTTTCTGAGATTCGGAAGGAATTTCAGTTTGAGACTGAGAGAGAAGCAGGTGGAAACAAAGGTGTCTCGGACAAGCAGATCCGGTTAAAGATTTTCTCCCAAAATGTTCTTGACATCACACTTGTTGATTTGCCTAGCATTACAAAAGTTCTCTCCAACGGACTAAGAGTTTCGGTCGAAGACCAGCCTTCTGACATTGAAGCAAGAATTAGGACAATGAGCTGTTTAATTCTTGCTGCTACACCAGCAAATTCTGATTTAGCTAACTCATATGCTCTTCAGATTGCAGGAAAGGCTGATCCTGATGGT

Protein sequence

MADEPVLPSTASVSSAAAPFGSSMIPIVNKLQVIFAKVAVVGSQSSGKSRFYDFSEIRKEFQFETEREAGGNKGVSDKQIRLKIFSQNVLDITLVDLPSITKVLSNGLRVSVEDQPSDIEARIRTMSCLILAATPANSDLANSYALQIAGKADPDG

Homology

[Close]

BLAST of MS012344 vs. NCBI nr
Match: XP_022149203.1 (dynamin-related protein 3A-like [Momordica charantia])

HSP 1 Score: 201.4 bits (511), Expect = 5.5e-48
Identity = 134/221 (60.63%), Postives = 137/221 (61.99%), Query Frame = 0


Query: 1   MADEPVLPSTASVSSAAAPFGSSMIPIVNKLQVIFA-----------KVAVVGSQSSGKS 60
           MADEPV PST+SVSSAAAP GSS+IPIVNKLQ IFA           +VAVVGSQSSGKS
Sbjct: 1   MADEPVPPSTSSVSSAAAPLGSSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGKS 60

Query: 61  ----------------------------------------------RFYDFSEIRKEFQF 120
                                                         RFYDFSEIRKE Q 
Sbjct: 61  SVLEALVGRDFLPRGSEICTRRPLVLQLLQTKTAEEYGEFLHLPGKRFYDFSEIRKEIQS 120

Query: 121 ETEREAGGNKGVSDKQIRLKIFSQNVLDITLVDLPSITKVLSNGLRVSVEDQPSDIEARI 157
           ETEREAGGNKGVSDKQIRLKIFS NVLDITLVDLP ITK       V V DQPSDIEARI
Sbjct: 121 ETEREAGGNKGVSDKQIRLKIFSPNVLDITLVDLPGITK-------VPVGDQPSDIEARI 180

[Close]

BLAST of MS012344 vs. NCBI nr
Match: XP_038903843.1 (dynamin-related protein 3A isoform X2 [Benincasa hispida])

HSP 1 Score: 195.3 bits (495), Expect = 4.0e-46
Identity = 129/221 (58.37%), Postives = 135/221 (61.09%), Query Frame = 0


Query: 1   MADEPVLPSTASVSSAAAPFGSSMIPIVNKLQVIFA-----------KVAVVGSQSSGKS 60
           MAD+PV PST SVSS+AAP GSS+IPIVNKLQ IFA           +VAVVGSQSSGKS
Sbjct: 1   MADDPVAPSTPSVSSSAAPLGSSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGKS 60

Query: 61  ----------------------------------------------RFYDFSEIRKEFQF 120
                                                         +FYDFSEIRKE Q 
Sbjct: 61  SVLEALVGRDFLPRGSGICTRRPLVLQLLQTKTDKEYGEFLHLPGQKFYDFSEIRKEIQS 120

Query: 121 ETEREAGGNKGVSDKQIRLKIFSQNVLDITLVDLPSITKVLSNGLRVSVEDQPSDIEARI 157
           ETERE GGNKGVSDKQIRLKIFS NVLDITLVDLP ITK       V V DQPSDIEARI
Sbjct: 121 ETEREVGGNKGVSDKQIRLKIFSPNVLDITLVDLPGITK-------VPVGDQPSDIEARI 180

[Close]

BLAST of MS012344 vs. NCBI nr
Match: XP_038903842.1 (dynamin-related protein 3A isoform X1 [Benincasa hispida])

HSP 1 Score: 195.3 bits (495), Expect = 4.0e-46
Identity = 129/221 (58.37%), Postives = 135/221 (61.09%), Query Frame = 0


Query: 1   MADEPVLPSTASVSSAAAPFGSSMIPIVNKLQVIFA-----------KVAVVGSQSSGKS 60
           MAD+PV PST SVSS+AAP GSS+IPIVNKLQ IFA           +VAVVGSQSSGKS
Sbjct: 1   MADDPVAPSTPSVSSSAAPLGSSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGKS 60

Query: 61  ----------------------------------------------RFYDFSEIRKEFQF 120
                                                         +FYDFSEIRKE Q 
Sbjct: 61  SVLEALVGRDFLPRGSGICTRRPLVLQLLQTKTDKEYGEFLHLPGQKFYDFSEIRKEIQS 120

Query: 121 ETEREAGGNKGVSDKQIRLKIFSQNVLDITLVDLPSITKVLSNGLRVSVEDQPSDIEARI 157
           ETERE GGNKGVSDKQIRLKIFS NVLDITLVDLP ITK       V V DQPSDIEARI
Sbjct: 121 ETEREVGGNKGVSDKQIRLKIFSPNVLDITLVDLPGITK-------VPVGDQPSDIEARI 180

[Close]

BLAST of MS012344 vs. NCBI nr
Match: XP_004147508.1 (dynamin-related protein 3A [Cucumis sativus] >KAE8649386.1 hypothetical protein Csa_011818 [Cucumis sativus])

HSP 1 Score: 191.8 bits (486), Expect = 4.4e-45
Identity = 130/222 (58.56%), Postives = 135/222 (60.81%), Query Frame = 0


Query: 1   MADEPVLPSTASV-SSAAAPFGSSMIPIVNKLQVIFA-----------KVAVVGSQSSGK 60
           MAD+PV PST SV SSAAAP GSS+IPIVNKLQ IFA           +VAVVGSQSSGK
Sbjct: 1   MADDPVAPSTPSVSSSAAAPLGSSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGK 60

Query: 61  S----------------------------------------------RFYDFSEIRKEFQ 120
           S                                              +FYDFSEIR+E Q
Sbjct: 61  SSVLEALVGRDFLPRGSGICTRRPLVLQLLQTNTDKEYGEFLHLPGKKFYDFSEIRREIQ 120

Query: 121 FETEREAGGNKGVSDKQIRLKIFSQNVLDITLVDLPSITKVLSNGLRVSVEDQPSDIEAR 157
            ETERE GGNKGVSDKQIRLKIFS NVLDITLVDLP ITK       V V DQPSDIEAR
Sbjct: 121 SETEREVGGNKGVSDKQIRLKIFSPNVLDITLVDLPGITK-------VPVGDQPSDIEAR 180

[Close]

BLAST of MS012344 vs. NCBI nr
Match: KAG6600249.1 (Dynamin-related protein 3A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191.0 bits (484), Expect = 7.5e-45
Identity = 129/221 (58.37%), Postives = 134/221 (60.63%), Query Frame = 0


Query: 1   MADEPVLPSTASVSSAAAPFGSSMIPIVNKLQVIFA-----------KVAVVGSQSSGKS 60
           MADE V PST SVSS+AAP GSS+IPIVNKLQ IFA           +VAVVGSQSSGKS
Sbjct: 179 MADEAVPPSTPSVSSSAAPLGSSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGKS 238

Query: 61  ----------------------------------------------RFYDFSEIRKEFQF 120
                                                         RFYDFSEIR+E Q 
Sbjct: 239 SVLEALVGRDFLPRGSEICTRRPLVLQLLQTKTEEEYGEFLHLPGKRFYDFSEIRREIQS 298

Query: 121 ETEREAGGNKGVSDKQIRLKIFSQNVLDITLVDLPSITKVLSNGLRVSVEDQPSDIEARI 157
           ET+REAGGNKGVSDKQIRLKIFS NVLDITLVDLP ITK       V V DQPSDIEARI
Sbjct: 299 ETDREAGGNKGVSDKQIRLKIFSPNVLDITLVDLPGITK-------VPVGDQPSDIEARI 358

[Close]

BLAST of MS012344 vs. ExPASy Swiss-Prot
Match: Q8S944 (Dynamin-related protein 3A OS=Arabidopsis thaliana OX=3702 GN=DRP3A PE=1 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 2.5e-35
Identity = 108/220 (49.09%), Postives = 119/220 (54.09%), Query Frame = 0


Query: 8   PSTASVSSAAAPFGSSMIPIVNKLQVIFA-----------KVAVVGSQSSGKS------- 67
           PS +S ++ AAP GSS+IPIVNKLQ IFA           +V VVGSQSSGKS       
Sbjct: 21  PSPSSSTTNAAPLGSSVIPIVNKLQDIFAQLGSQSTIALPQVVVVGSQSSGKSSVLEALV 80

Query: 68  ---------------------------------------------RFYDFSEIRKEFQFE 127
                                                        RFYDFSEIR+E + E
Sbjct: 81  GRDFLPRGNDICTRRPLVLQLLQTKSRANGGSDDEWGEFRHLPETRFYDFSEIRREIEAE 140

Query: 128 TEREAGGNKGVSDKQIRLKIFSQNVLDITLVDLPSITKVLSNGLRVSVEDQPSDIEARIR 157
           T R  G NKGV+D QIRLKI S NVL+ITLVDLP ITK       V V DQPSDIEARIR
Sbjct: 141 TNRLVGENKGVADTQIRLKISSPNVLNITLVDLPGITK-------VPVGDQPSDIEARIR 200

[Close]

BLAST of MS012344 vs. ExPASy Swiss-Prot
Match: Q8LFT2 (Dynamin-related protein 3B OS=Arabidopsis thaliana OX=3702 GN=DRP3B PE=1 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 2.5e-35
Identity = 111/228 (48.68%), Postives = 123/228 (53.95%), Query Frame = 0


Query: 1   MADEPVLPSTASVSSAAAPFGSSMIPIVNKLQVIFA-----------KVAVVGSQSSGKS 60
           M+ + + PS+A   SA  P GSS+IPIVNKLQ IFA           +VAVVGSQSSGKS
Sbjct: 1   MSVDDLPPSSA---SAVTPLGSSVIPIVNKLQDIFAQLGSQSTIALPQVAVVGSQSSGKS 60

Query: 61  -----------------------------------------------------RFYDFSE 120
                                                                R YDFSE
Sbjct: 61  SVLEALVGRDFLPRGNDICTRRPLRLQLVQTKPSSDGGSDEEWGEFLHHDPVRRIYDFSE 120

Query: 121 IRKEFQFETEREAGGNKGVSDKQIRLKIFSQNVLDITLVDLPSITKVLSNGLRVSVEDQP 157
           IR+E + ET R +G NKGVSD  I LKIFS NVLDI+LVDLP ITK       V V DQP
Sbjct: 121 IRREIEAETNRVSGENKGVSDIPIGLKIFSPNVLDISLVDLPGITK-------VPVGDQP 180

[Close]

BLAST of MS012344 vs. ExPASy Swiss-Prot
Match: P39055 (Dynamin OS=Caenorhabditis elegans OX=6239 GN=dyn-1 PE=1 SV=3)

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-22
Identity = 74/197 (37.56%), Postives = 100/197 (50.76%), Query Frame = 0


Query: 23  SMIPIVNKLQVIFA-----------KVAVVGSQSSGKS---------------------- 82
           ++IP++N++Q  F+           ++AVVG QS+GKS                      
Sbjct: 10  ALIPVINRVQDAFSQLGTSVSFELPQIAVVGGQSAGKSSVLENFVGKDFLPRGSGIVTRR 69

Query: 83  ----------------------RFYDFSEIRKEFQFETEREAGGNKGVSDKQIRLKIFSQ 142
                                 RF DF  +RKE + ET+R  G NKG+S   I L++FS 
Sbjct: 70  PLILQLIQDRNEYAEFLHKKGHRFVDFDAVRKEIEDETDRVTGQNKGISPHPINLRVFSP 129

Query: 143 NVLDITLVDLPSITKVLSNGLRVSVEDQPSDIEARIRTM--------SCLILAATPANSD 157
           NVL++TL+DLP +TK       V V DQP+DIE +IR M        +CLILA TPANSD
Sbjct: 130 NVLNLTLIDLPGLTK-------VPVGDQPADIEQQIRDMILTFINRETCLILAVTPANSD 189

[Close]

BLAST of MS012344 vs. ExPASy Swiss-Prot
Match: Q08877 (Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 7.1e-22
Identity = 74/196 (37.76%), Postives = 99/196 (50.51%), Query Frame = 0


Query: 24  MIPIVNKLQVIFA-----------KVAVVGSQSSGKS----------------------- 83
           +IP+VN+LQ  F+           ++AVVG QS+GKS                       
Sbjct: 9   LIPLVNRLQDAFSALGQSCLLELPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRP 68

Query: 84  ---------------------RFYDFSEIRKEFQFETEREAGGNKGVSDKQIRLKIFSQN 143
                                +F DF E+R E + ET+R  G NKG+S   I L+++S +
Sbjct: 69  LVLQLVTSKAEYAEFLHCKGKKFTDFDEVRHEIEAETDRVTGMNKGISSVPINLRVYSPH 128

Query: 144 VLDITLVDLPSITKVLSNGLRVSVEDQPSDIEARIRTM--------SCLILAATPANSDL 157
           VL++TL+DLP ITK       V V DQP DIE +IR M        +CLILA TPAN+DL
Sbjct: 129 VLNLTLIDLPGITK-------VPVGDQPPDIEYQIRDMIMQFITRENCLILAVTPANTDL 188

[Close]

BLAST of MS012344 vs. ExPASy Swiss-Prot
Match: Q8BZ98 (Dynamin-3 OS=Mus musculus OX=10090 GN=Dnm3 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 9.3e-22
Identity = 74/196 (37.76%), Postives = 99/196 (50.51%), Query Frame = 0


Query: 24  MIPIVNKLQVIFA-----------KVAVVGSQSSGKS----------------------- 83
           +IP+VN+LQ  F+           ++AVVG QS+GKS                       
Sbjct: 9   LIPLVNRLQDAFSALGQSCLLELPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRP 68

Query: 84  ---------------------RFYDFSEIRKEFQFETEREAGGNKGVSDKQIRLKIFSQN 143
                                +F DF E+R E + ET+R  G NKG+S   I L+++S +
Sbjct: 69  LVLQLVTSKAEYAEFLHCKGKKFTDFDEVRHEIEAETDRVTGMNKGISSIPINLRVYSPH 128

Query: 144 VLDITLVDLPSITKVLSNGLRVSVEDQPSDIEARIRTM--------SCLILAATPANSDL 157
           VL++TL+DLP ITK       V V DQP DIE +IR M        +CLILA TPAN+DL
Sbjct: 129 VLNLTLIDLPGITK-------VPVGDQPPDIEYQIRDMIMQFITRENCLILAVTPANTDL 188

[Close]

BLAST of MS012344 vs. ExPASy TrEMBL
Match: A0A6J1D668 (dynamin-related protein 3A-like OS=Momordica charantia OX=3673 GN=LOC111017682 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.7e-48
Identity = 134/221 (60.63%), Postives = 137/221 (61.99%), Query Frame = 0


Query: 1   MADEPVLPSTASVSSAAAPFGSSMIPIVNKLQVIFA-----------KVAVVGSQSSGKS 60
           MADEPV PST+SVSSAAAP GSS+IPIVNKLQ IFA           +VAVVGSQSSGKS
Sbjct: 1   MADEPVPPSTSSVSSAAAPLGSSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGKS 60

Query: 61  ----------------------------------------------RFYDFSEIRKEFQF 120
                                                         RFYDFSEIRKE Q 
Sbjct: 61  SVLEALVGRDFLPRGSEICTRRPLVLQLLQTKTAEEYGEFLHLPGKRFYDFSEIRKEIQS 120

Query: 121 ETEREAGGNKGVSDKQIRLKIFSQNVLDITLVDLPSITKVLSNGLRVSVEDQPSDIEARI 157
           ETEREAGGNKGVSDKQIRLKIFS NVLDITLVDLP ITK       V V DQPSDIEARI
Sbjct: 121 ETEREAGGNKGVSDKQIRLKIFSPNVLDITLVDLPGITK-------VPVGDQPSDIEARI 180

[Close]

BLAST of MS012344 vs. ExPASy TrEMBL
Match: A0A0A0L175 (Dynamin OS=Cucumis sativus OX=3659 GN=Csa_4G182220 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.1e-45
Identity = 130/222 (58.56%), Postives = 135/222 (60.81%), Query Frame = 0


Query: 1   MADEPVLPSTASV-SSAAAPFGSSMIPIVNKLQVIFA-----------KVAVVGSQSSGK 60
           MAD+PV PST SV SSAAAP GSS+IPIVNKLQ IFA           +VAVVGSQSSGK
Sbjct: 1   MADDPVAPSTPSVSSSAAAPLGSSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGK 60

Query: 61  S----------------------------------------------RFYDFSEIRKEFQ 120
           S                                              +FYDFSEIR+E Q
Sbjct: 61  SSVLEALVGRDFLPRGSGICTRRPLVLQLLQTNTDKEYGEFLHLPGKKFYDFSEIRREIQ 120

Query: 121 FETEREAGGNKGVSDKQIRLKIFSQNVLDITLVDLPSITKVLSNGLRVSVEDQPSDIEAR 157
            ETERE GGNKGVSDKQIRLKIFS NVLDITLVDLP ITK       V V DQPSDIEAR
Sbjct: 121 SETEREVGGNKGVSDKQIRLKIFSPNVLDITLVDLPGITK-------VPVGDQPSDIEAR 180

[Close]

BLAST of MS012344 vs. ExPASy TrEMBL
Match: A0A6J1FWF7 (dynamin-related protein 3A-like OS=Cucurbita moschata OX=3662 GN=LOC111447523 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.6e-45
Identity = 129/221 (58.37%), Postives = 134/221 (60.63%), Query Frame = 0


Query: 1   MADEPVLPSTASVSSAAAPFGSSMIPIVNKLQVIFA-----------KVAVVGSQSSGKS 60
           MADE V PST SVSS+AAP GSS+IPIVNKLQ IFA           +VAVVGSQSSGKS
Sbjct: 1   MADEAVPPSTPSVSSSAAPLGSSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGKS 60

Query: 61  ----------------------------------------------RFYDFSEIRKEFQF 120
                                                         RFYDFSEIR+E Q 
Sbjct: 61  SVLEALVGRDFLPRGSEICTRRPLVLQLLQTKTEEEYGEFLHLPGKRFYDFSEIRREIQS 120

Query: 121 ETEREAGGNKGVSDKQIRLKIFSQNVLDITLVDLPSITKVLSNGLRVSVEDQPSDIEARI 157
           ET+REAGGNKGVSDKQIRLKIFS NVLDITLVDLP ITK       V V DQPSDIEARI
Sbjct: 121 ETDREAGGNKGVSDKQIRLKIFSPNVLDITLVDLPGITK-------VPVGDQPSDIEARI 180

[Close]

BLAST of MS012344 vs. ExPASy TrEMBL
Match: A0A5D3E103 (Dynamin-related protein 3A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00080 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.4e-44
Identity = 128/222 (57.66%), Postives = 134/222 (60.36%), Query Frame = 0


Query: 1   MADEPVLPSTASV-SSAAAPFGSSMIPIVNKLQVIFA-----------KVAVVGSQSSGK 60
           MAD+PV PS  SV SS+AAP GSS+IPIVNKLQ IFA           +VAVVGSQSSGK
Sbjct: 1   MADDPVAPSMPSVSSSSAAPLGSSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGK 60

Query: 61  S----------------------------------------------RFYDFSEIRKEFQ 120
           S                                              +FYDFSEIR+E Q
Sbjct: 61  SSVLEALVGRDFLPRGSGICTRRPLVLQLLQTNTDKEYGEFLHLPGKKFYDFSEIRREIQ 120

Query: 121 FETEREAGGNKGVSDKQIRLKIFSQNVLDITLVDLPSITKVLSNGLRVSVEDQPSDIEAR 157
            ETERE GGNKGVSDKQIRLKIFS NVLDITLVDLP ITK       V V DQPSDIEAR
Sbjct: 121 SETEREVGGNKGVSDKQIRLKIFSPNVLDITLVDLPGITK-------VPVGDQPSDIEAR 180

[Close]

BLAST of MS012344 vs. ExPASy TrEMBL
Match: A0A5A7TQZ1 (Dynamin-related protein 3A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00080 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.4e-44
Identity = 128/222 (57.66%), Postives = 134/222 (60.36%), Query Frame = 0


Query: 1   MADEPVLPSTASV-SSAAAPFGSSMIPIVNKLQVIFA-----------KVAVVGSQSSGK 60
           MAD+PV PS  SV SS+AAP GSS+IPIVNKLQ IFA           +VAVVGSQSSGK
Sbjct: 1   MADDPVAPSMPSVSSSSAAPLGSSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGSQSSGK 60

Query: 61  S----------------------------------------------RFYDFSEIRKEFQ 120
           S                                              +FYDFSEIR+E Q
Sbjct: 61  SSVLEALVGRDFLPRGSGICTRRPLVLQLLQTNTDKEYGEFLHLPGKKFYDFSEIRREIQ 120

Query: 121 FETEREAGGNKGVSDKQIRLKIFSQNVLDITLVDLPSITKVLSNGLRVSVEDQPSDIEAR 157
            ETERE GGNKGVSDKQIRLKIFS NVLDITLVDLP ITK       V V DQPSDIEAR
Sbjct: 121 SETEREVGGNKGVSDKQIRLKIFSPNVLDITLVDLPGITK-------VPVGDQPSDIEAR 180

[Close]

BLAST of MS012344 vs. TAIR 10
Match: AT2G14120.1 (dynamin related protein )

HSP 1 Score: 149.8 bits (377), Expect = 1.8e-36
Identity = 111/228 (48.68%), Postives = 123/228 (53.95%), Query Frame = 0


Query: 1   MADEPVLPSTASVSSAAAPFGSSMIPIVNKLQVIFA-----------KVAVVGSQSSGKS 60
           M+ + + PS+A   SA  P GSS+IPIVNKLQ IFA           +VAVVGSQSSGKS
Sbjct: 1   MSVDDLPPSSA---SAVTPLGSSVIPIVNKLQDIFAQLGSQSTIALPQVAVVGSQSSGKS 60

Query: 61  -----------------------------------------------------RFYDFSE 120
                                                                R YDFSE
Sbjct: 61  SVLEALVGRDFLPRGNDICTRRPLRLQLVQTKPSSDGGSDEEWGEFLHHDPVRRIYDFSE 120

Query: 121 IRKEFQFETEREAGGNKGVSDKQIRLKIFSQNVLDITLVDLPSITKVLSNGLRVSVEDQP 157
           IR+E + ET R +G NKGVSD  I LKIFS NVLDI+LVDLP ITK       V V DQP
Sbjct: 121 IRREIEAETNRVSGENKGVSDIPIGLKIFSPNVLDISLVDLPGITK-------VPVGDQP 180

[Close]

BLAST of MS012344 vs. TAIR 10
Match: AT2G14120.2 (dynamin related protein )

HSP 1 Score: 149.8 bits (377), Expect = 1.8e-36
Identity = 111/228 (48.68%), Postives = 123/228 (53.95%), Query Frame = 0


Query: 1   MADEPVLPSTASVSSAAAPFGSSMIPIVNKLQVIFA-----------KVAVVGSQSSGKS 60
           M+ + + PS+A   SA  P GSS+IPIVNKLQ IFA           +VAVVGSQSSGKS
Sbjct: 1   MSVDDLPPSSA---SAVTPLGSSVIPIVNKLQDIFAQLGSQSTIALPQVAVVGSQSSGKS 60

Query: 61  -----------------------------------------------------RFYDFSE 120
                                                                R YDFSE
Sbjct: 61  SVLEALVGRDFLPRGNDICTRRPLRLQLVQTKPSSDGGSDEEWGEFLHHDPVRRIYDFSE 120

Query: 121 IRKEFQFETEREAGGNKGVSDKQIRLKIFSQNVLDITLVDLPSITKVLSNGLRVSVEDQP 157
           IR+E + ET R +G NKGVSD  I LKIFS NVLDI+LVDLP ITK       V V DQP
Sbjct: 121 IRREIEAETNRVSGENKGVSDIPIGLKIFSPNVLDISLVDLPGITK-------VPVGDQP 180

[Close]

BLAST of MS012344 vs. TAIR 10
Match: AT2G14120.3 (dynamin related protein )

HSP 1 Score: 149.8 bits (377), Expect = 1.8e-36
Identity = 111/228 (48.68%), Postives = 123/228 (53.95%), Query Frame = 0


Query: 1   MADEPVLPSTASVSSAAAPFGSSMIPIVNKLQVIFA-----------KVAVVGSQSSGKS 60
           M+ + + PS+A   SA  P GSS+IPIVNKLQ IFA           +VAVVGSQSSGKS
Sbjct: 1   MSVDDLPPSSA---SAVTPLGSSVIPIVNKLQDIFAQLGSQSTIALPQVAVVGSQSSGKS 60

Query: 61  -----------------------------------------------------RFYDFSE 120
                                                                R YDFSE
Sbjct: 61  SVLEALVGRDFLPRGNDICTRRPLRLQLVQTKPSSDGGSDEEWGEFLHHDPVRRIYDFSE 120

Query: 121 IRKEFQFETEREAGGNKGVSDKQIRLKIFSQNVLDITLVDLPSITKVLSNGLRVSVEDQP 157
           IR+E + ET R +G NKGVSD  I LKIFS NVLDI+LVDLP ITK       V V DQP
Sbjct: 121 IRREIEAETNRVSGENKGVSDIPIGLKIFSPNVLDISLVDLPGITK-------VPVGDQP 180

[Close]

BLAST of MS012344 vs. TAIR 10
Match: AT4G33650.1 (dynamin-related protein 3A )

HSP 1 Score: 149.8 bits (377), Expect = 1.8e-36
Identity = 108/220 (49.09%), Postives = 119/220 (54.09%), Query Frame = 0


Query: 8   PSTASVSSAAAPFGSSMIPIVNKLQVIFA-----------KVAVVGSQSSGKS------- 67
           PS +S ++ AAP GSS+IPIVNKLQ IFA           +V VVGSQSSGKS       
Sbjct: 21  PSPSSSTTNAAPLGSSVIPIVNKLQDIFAQLGSQSTIALPQVVVVGSQSSGKSSVLEALV 80

Query: 68  ---------------------------------------------RFYDFSEIRKEFQFE 127
                                                        RFYDFSEIR+E + E
Sbjct: 81  GRDFLPRGNDICTRRPLVLQLLQTKSRANGGSDDEWGEFRHLPETRFYDFSEIRREIEAE 140

Query: 128 TEREAGGNKGVSDKQIRLKIFSQNVLDITLVDLPSITKVLSNGLRVSVEDQPSDIEARIR 157
           T R  G NKGV+D QIRLKI S NVL+ITLVDLP ITK       V V DQPSDIEARIR
Sbjct: 141 TNRLVGENKGVADTQIRLKISSPNVLNITLVDLPGITK-------VPVGDQPSDIEARIR 200

[Close]

BLAST of MS012344 vs. TAIR 10
Match: AT4G33650.2 (dynamin-related protein 3A )

HSP 1 Score: 149.8 bits (377), Expect = 1.8e-36
Identity = 108/220 (49.09%), Postives = 119/220 (54.09%), Query Frame = 0


Query: 8   PSTASVSSAAAPFGSSMIPIVNKLQVIFA-----------KVAVVGSQSSGKS------- 67
           PS +S ++ AAP GSS+IPIVNKLQ IFA           +V VVGSQSSGKS       
Sbjct: 21  PSPSSSTTNAAPLGSSVIPIVNKLQDIFAQLGSQSTIALPQVVVVGSQSSGKSSVLEALV 80

Query: 68  ---------------------------------------------RFYDFSEIRKEFQFE 127
                                                        RFYDFSEIR+E + E
Sbjct: 81  GRDFLPRGNDICTRRPLVLQLLQTKSRANGGSDDEWGEFRHLPETRFYDFSEIRREIEAE 140

Query: 128 TEREAGGNKGVSDKQIRLKIFSQNVLDITLVDLPSITKVLSNGLRVSVEDQPSDIEARIR 157
           T R  G NKGV+D QIRLKI S NVL+ITLVDLP ITK       V V DQPSDIEARIR
Sbjct: 141 TNRLVGENKGVADTQIRLKISSPNVLNITLVDLPGITK-------VPVGDQPSDIEARIR 200

The following BLAST results are available for this feature:

BLAST of MS012344 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149203.1	5.5e-48	60.63	dynamin-related protein 3A-like [Momordica charantia]	[more]
XP_038903843.1	4.0e-46	58.37	dynamin-related protein 3A isoform X2 [Benincasa hispida]	[more]
XP_038903842.1	4.0e-46	58.37	dynamin-related protein 3A isoform X1 [Benincasa hispida]	[more]
XP_004147508.1	4.4e-45	58.56	dynamin-related protein 3A [Cucumis sativus] >KAE8649386.1 hypothetical protein ...	[more]
KAG6600249.1	7.5e-45	58.37	Dynamin-related protein 3A, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MS012344 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S944	2.5e-35	49.09	Dynamin-related protein 3A OS=Arabidopsis thaliana OX=3702 GN=DRP3A PE=1 SV=2	[more]
Q8LFT2	2.5e-35	48.68	Dynamin-related protein 3B OS=Arabidopsis thaliana OX=3702 GN=DRP3B PE=1 SV=2	[more]
P39055	1.1e-22	37.56	Dynamin OS=Caenorhabditis elegans OX=6239 GN=dyn-1 PE=1 SV=3	[more]
Q08877	7.1e-22	37.76	Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2	[more]
Q8BZ98	9.3e-22	37.76	Dynamin-3 OS=Mus musculus OX=10090 GN=Dnm3 PE=1 SV=1	[more]

BLAST of MS012344 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D668	2.7e-48	60.63	dynamin-related protein 3A-like OS=Momordica charantia OX=3673 GN=LOC111017682 P...	[more]
A0A0A0L175	2.1e-45	58.56	Dynamin OS=Cucumis sativus OX=3659 GN=Csa_4G182220 PE=3 SV=1	[more]
A0A6J1FWF7	3.6e-45	58.37	dynamin-related protein 3A-like OS=Cucurbita moschata OX=3662 GN=LOC111447523 PE...	[more]
A0A5D3E103	2.4e-44	57.66	Dynamin-related protein 3A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7TQZ1	2.4e-44	57.66	Dynamin-related protein 3A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]

BLAST of MS012344 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14120.1	1.8e-36	48.68	dynamin related protein	[more]
AT2G14120.2	1.8e-36	48.68	dynamin related protein	[more]
AT2G14120.3	1.8e-36	48.68	dynamin related protein	[more]
AT4G33650.1	1.8e-36	49.09	dynamin-related protein 3A	[more]
AT4G33650.2	1.8e-36	49.09	dynamin-related protein 3A	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001401	Dynamin, GTPase domain	SMART	SM00053	dynamin_3	coord: 21..156 e-value: 2.1E-7 score: -4.1
IPR045063	Dynamin, N-terminal	PFAM	PF00350	Dynamin_N	coord: 50..156 e-value: 6.8E-15 score: 55.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 49..156 e-value: 1.3E-23 score: 85.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 24..155
None	No IPR available	PANTHER	PTHR11566:SF170	DYNAMIN 3A-LIKE PROTEIN	coord: 50..156
IPR022812	Dynamin	PANTHER	PTHR11566	DYNAMIN	coord: 50..156
IPR030381	Dynamin-type guanine nucleotide-binding (G) domain	PROSITE	PS51718	G_DYNAMIN_2	coord: 1..156 score: 16.612654

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012344.1	MS012344.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding