MS012263 (gene) Bitter gourd (TR) v1

Overview


Name	MS012263
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ethylene-responsive transcription factor ERF109-like
Location	scaffold797: 959439 .. 960260 (+)
RNA-Seq Expression	MS012263
Synteny	MS012263

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAATGACCTCCGACCGCCCCCCCTTCCGCCGGATCTCGGAGGAGCAGGAGGTTTCCGTCATCGTCGACGCCCTCACCAAAGTTGTCTCCGGCGCCGTCGCCAAAGGCCTCCAATTCCGCCCCGACCATTTCCTCCACCTCCTCTCCCCAATCTCCTCCCTCTCGGATTCCGCCTCCACTTCCTTAAACGACGCCGTCCTCCCCCTTTCTGATTTCGACACGTGTCACGTCTGCAGAATTAAAGGGTGCCTCGGCTGTAATTTCTTCCCGCCCTCGTCCCAGTCCGACGATCGCAAGAAATTGGGCGTCGGCGGCGGCGGCCGGAAGGCGAAGCGGTTGAAGAAGAATTACAGAGGCGTGCGGCAGCGGCCGTGGGGGAAATGGGCCGCCGAGATCCGTGACCCGAAACAGGCGACCCGGGTCTGGCTCGGTACTTTCAACACCGCTGAGGACGCCGCACGTGCGTACGACGAAGCCGCTATTAGATTCCGCGGCCCACGTGCGAAGCTCAATTTCCCATTCCCCGATAACTCCCTAACATTCAATCTCCCAAATTTCTCTCCGGCGGCCGCGGTTACAACCGCCGCCACCGCCGCCACCGCCGCCGCTGCCACTGCCACTCCAGATCAGAACCGGCAGTCAACTAATAATTTGTACGGAAATGAAGCTCCGAAGATCAGCAGCAGCAACAACGAATTCTCGTTCCCCTCGAAAATGGAGATCCAAAACGACGACGAATTGCCGAAAACGACGACGTTCGAGGACGATGACATCCAGAGCTGGATAATGGATTTATCTGGTGGTCAATCTCTGAGCTGG

mRNA sequence

ATGCAAATGACCTCCGACCGCCCCCCCTTCCGCCGGATCTCGGAGGAGCAGGAGGTTTCCGTCATCGTCGACGCCCTCACCAAAGTTGTCTCCGGCGCCGTCGCCAAAGGCCTCCAATTCCGCCCCGACCATTTCCTCCACCTCCTCTCCCCAATCTCCTCCCTCTCGGATTCCGCCTCCACTTCCTTAAACGACGCCGTCCTCCCCCTTTCTGATTTCGACACGTGTCACGTCTGCAGAATTAAAGGGTGCCTCGGCTGTAATTTCTTCCCGCCCTCGTCCCAGTCCGACGATCGCAAGAAATTGGGCGTCGGCGGCGGCGGCCGGAAGGCGAAGCGGTTGAAGAAGAATTACAGAGGCGTGCGGCAGCGGCCGTGGGGGAAATGGGCCGCCGAGATCCGTGACCCGAAACAGGCGACCCGGGTCTGGCTCGGTACTTTCAACACCGCTGAGGACGCCGCACGTGCGTACGACGAAGCCGCTATTAGATTCCGCGGCCCACGTGCGAAGCTCAATTTCCCATTCCCCGATAACTCCCTAACATTCAATCTCCCAAATTTCTCTCCGGCGGCCGCGGTTACAACCGCCGCCACCGCCGCCACCGCCGCCGCTGCCACTGCCACTCCAGATCAGAACCGGCAGTCAACTAATAATTTGTACGGAAATGAAGCTCCGAAGATCAGCAGCAGCAACAACGAATTCTCGTTCCCCTCGAAAATGGAGATCCAAAACGACGACGAATTGCCGAAAACGACGACGTTCGAGGACGATGACATCCAGAGCTGGATAATGGATTTATCTGGTGGTCAATCTCTGAGCTGG

Coding sequence (CDS)

ATGCAAATGACCTCCGACCGCCCCCCCTTCCGCCGGATCTCGGAGGAGCAGGAGGTTTCCGTCATCGTCGACGCCCTCACCAAAGTTGTCTCCGGCGCCGTCGCCAAAGGCCTCCAATTCCGCCCCGACCATTTCCTCCACCTCCTCTCCCCAATCTCCTCCCTCTCGGATTCCGCCTCCACTTCCTTAAACGACGCCGTCCTCCCCCTTTCTGATTTCGACACGTGTCACGTCTGCAGAATTAAAGGGTGCCTCGGCTGTAATTTCTTCCCGCCCTCGTCCCAGTCCGACGATCGCAAGAAATTGGGCGTCGGCGGCGGCGGCCGGAAGGCGAAGCGGTTGAAGAAGAATTACAGAGGCGTGCGGCAGCGGCCGTGGGGGAAATGGGCCGCCGAGATCCGTGACCCGAAACAGGCGACCCGGGTCTGGCTCGGTACTTTCAACACCGCTGAGGACGCCGCACGTGCGTACGACGAAGCCGCTATTAGATTCCGCGGCCCACGTGCGAAGCTCAATTTCCCATTCCCCGATAACTCCCTAACATTCAATCTCCCAAATTTCTCTCCGGCGGCCGCGGTTACAACCGCCGCCACCGCCGCCACCGCCGCCGCTGCCACTGCCACTCCAGATCAGAACCGGCAGTCAACTAATAATTTGTACGGAAATGAAGCTCCGAAGATCAGCAGCAGCAACAACGAATTCTCGTTCCCCTCGAAAATGGAGATCCAAAACGACGACGAATTGCCGAAAACGACGACGTTCGAGGACGATGACATCCAGAGCTGGATAATGGATTTATCTGGTGGTCAATCTCTGAGCTGG

Protein sequence

MQMTSDRPPFRRISEEQEVSVIVDALTKVVSGAVAKGLQFRPDHFLHLLSPISSLSDSASTSLNDAVLPLSDFDTCHVCRIKGCLGCNFFPPSSQSDDRKKLGVGGGGRKAKRLKKNYRGVRQRPWGKWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFPFPDNSLTFNLPNFSPAAAVTTAATAATAAAATATPDQNRQSTNNLYGNEAPKISSSNNEFSFPSKMEIQNDDELPKTTTFEDDDIQSWIMDLSGGQSLSW

Homology

[Close]

BLAST of MS012263 vs. NCBI nr
Match: XP_022136049.1 (ethylene-responsive transcription factor ERF109-like [Momordica charantia])

HSP 1 Score: 533.1 bits (1372), Expect = 1.4e-147
Identity = 271/274 (98.91%), Postives = 271/274 (98.91%), Query Frame = 0


Query: 1   MQMTSDRPPFRRISEEQEVSVIVDALTKVVSGAVAKGLQFRPDHFLHLLSPISSLSDSAS 60
           MQMTSDRPPFRRISEEQEVSVIVDALTKVVSGAVAKGLQFRPDHFLHLLSPISSLSDSAS
Sbjct: 1   MQMTSDRPPFRRISEEQEVSVIVDALTKVVSGAVAKGLQFRPDHFLHLLSPISSLSDSAS 60

Query: 61  TSLNDAVLPLSDFDTCHVCRIKGCLGCNFFPPSSQSDDRKKLGVGGGGRKAKRLKKNYRG 120
           TSLNDAVLPLSDFDTCHVCRIKGCLGCNFFPPSSQSDDRKKLGVGGGGRKAKRLKKNYRG
Sbjct: 61  TSLNDAVLPLSDFDTCHVCRIKGCLGCNFFPPSSQSDDRKKLGVGGGGRKAKRLKKNYRG 120

Query: 121 VRQRPWGKWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFPFPDNSL 180
           VRQRPWGKWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFPFPDNSL
Sbjct: 121 VRQRPWGKWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFPFPDNSL 180

Query: 181 TFNLPNFSPAAAVTTAATAATAAAATATPDQNRQSTNNLYGNEAPKISSSNNEFSFPSKM 240
           TFNLPNFSPAAAVT   TAATAAAATATPDQNRQSTNNLYGNEAPKISSSNNEFSFPSKM
Sbjct: 181 TFNLPNFSPAAAVT---TAATAAAATATPDQNRQSTNNLYGNEAPKISSSNNEFSFPSKM 240

Query: 241 EIQNDDELPKTTTFEDDDIQSWIMDLSGGQSLSW 275
           EIQNDDELPKTTTFEDDDIQSWIMDLSGGQSLSW
Sbjct: 241 EIQNDDELPKTTTFEDDDIQSWIMDLSGGQSLSW 271

[Close]

BLAST of MS012263 vs. NCBI nr
Match: XP_038888403.1 (ethylene-responsive transcription factor ERF109-like [Benincasa hispida])

HSP 1 Score: 261.2 bits (666), Expect = 1.0e-65
Identity = 160/277 (57.76%), Postives = 184/277 (66.43%), Query Frame = 0


Query: 1   MQMTSDRP---PFRRISEEQEVSVIVDALTKVVSGAVAKGLQFRPDHFLHLLSPISSLSD 60
           M M SD P    FRRI+EEQE+SVIVDALT+V+SGA + GLQF  DHF  LL P SS + 
Sbjct: 1   MLMASDHPAAAAFRRITEEQELSVIVDALTQVISGAASSGLQFHHDHFHRLLFPPSSSAP 60

Query: 61  SASTSLNDAVLPLSDFDTCHVCRIKGCLGCNFFPPSSQSDDRKKLGVGGGGRKAKRLKKN 120
           +A +S        SDFDTC VC+I GCLGCNFF  ++ S           GR+ KRLKKN
Sbjct: 61  AAFSS-------SSDFDTCPVCKINGCLGCNFF-SATASTSAATNNNNNPGRRVKRLKKN 120

Query: 121 YRGVRQRPWGKWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFPFPD 180
           YRGVRQRPWGKWAAEIRDPK+A RVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFPFPD
Sbjct: 121 YRGVRQRPWGKWAAEIRDPKRAQRVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFPFPD 180

Query: 181 NSLTFNLPNFSPAAAVTTAATAATAAAATATPDQNRQSTNNLYGNEAPKISSSNNEFSFP 240
           NSLT    +  P A+ TT+A+ +TAA A                  AP+ SSS       
Sbjct: 181 NSLT-TFRSSPPPASTTTSASTSTAAVA-----------------GAPRTSSS------- 240

Query: 241 SKMEIQNDDELPKTTTFEDDDIQSWIMDLSGGQSLSW 275
            K+E QND  LP+    +DDDIQ  +MD + GQS SW
Sbjct: 241 MKIETQNDIILPEIFN-DDDDIQRLLMDFA-GQSRSW 242

[Close]

BLAST of MS012263 vs. NCBI nr
Match: AUB30293.1 (ethylene-responsive transcription factor [Luffa aegyptiaca])

HSP 1 Score: 260.8 bits (665), Expect = 1.4e-65
Identity = 165/282 (58.51%), Postives = 191/282 (67.73%), Query Frame = 0


Query: 1   MQMTSDR-PPFRRISEEQEVSVIVDALTKVVSGAVAKGLQFRPDHFLHLLSPISSLSDSA 60
           M   SDR  PFRRI++EQE+SVIVDALT+VVSG  A GL+F+ D FL LL P        
Sbjct: 1   MVTASDRLHPFRRITDEQELSVIVDALTQVVSGPAADGLEFQHDRFLRLLLP-------- 60

Query: 61  STSLNDAVL--PLSDFDTCHVCRIKGCLGCNFFPPSSQSDDRKKLGVGGGGRKAKRLKKN 120
             S NDA +  P SDFDTCHVCRI GCLGCNFF   S             GR+ +R KKN
Sbjct: 61  --SANDAAVFPPSSDFDTCHVCRISGCLGCNFFSAPSSHQQPTTANSNNSGRRVRRQKKN 120

Query: 121 YRGVRQRPWGKWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFPFPD 180
           YRGVRQRPWGKWAAEIRDPK+A RVWLGTFNTAEDAARAYD AAI+FRGPRA+LNFP  D
Sbjct: 121 YRGVRQRPWGKWAAEIRDPKRAARVWLGTFNTAEDAARAYDAAAIKFRGPRARLNFPSTD 180

Query: 181 NSL-TFNLPNFSPAAAVTTAATAATAAAATATPDQNRQSTNNLYGNE---APKISSSNNE 240
            SL TF   N+SP AA T+ +T +TAAAATA       +T+ L+ NE   AP+ SSS   
Sbjct: 181 TSLMTF---NYSPPAASTSTST-STAAAATA-------ATSTLFQNEAAVAPRTSSS--- 240

Query: 241 FSFPSKME-IQNDDELPKTTTFEDDDIQSWIMDLSGGQSLSW 275
               +KME IQN+   P+    EDDD+Q+ IMD + GQS SW
Sbjct: 241 ----TKMEIIQNEVVFPEMLD-EDDDLQTLIMDFA-GQSRSW 252

[Close]

BLAST of MS012263 vs. NCBI nr
Match: XP_023530126.1 (ethylene-responsive transcription factor 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 252.7 bits (644), Expect = 3.7e-63
Identity = 152/261 (58.24%), Postives = 178/261 (68.20%), Query Frame = 0


Query: 10  FRRISEEQEVSVIVDALTKVVSGAVAKGLQFRPDHFLHLLSPISSLSDSASTSLNDAVLP 69
           F R+++EQE  VIVDALT+VVSGA A GL+FR DHFL LL P S++             P
Sbjct: 12  FPRLTDEQEGLVIVDALTQVVSGAAAAGLEFRHDHFLRLLHPPSTIFP-----------P 71

Query: 70  LSDFDTCHVCRIKGCLGCNFF--PPSSQSDDRKKLGVGGGGRKAKRLKKNYRGVRQRPWG 129
            SDFDTCH+CRI GCLGCNFF  P S Q            GR+ +RLKKNYRGVRQRPWG
Sbjct: 72  SSDFDTCHICRISGCLGCNFFSTPSSHQPTTTTTDKNNNSGRRVRRLKKNYRGVRQRPWG 131

Query: 130 KWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFPFPDNSLTFNLPNF 189
           KWAAEIRDPK+A RVWLGTFNTAE+AARAYDEAAI+FRGPRA+LNFP  DNSLT    N+
Sbjct: 132 KWAAEIRDPKRAARVWLGTFNTAEEAARAYDEAAIKFRGPRARLNFPSSDNSLT--TFNY 191

Query: 190 SPAAAVTTAATAATAAAATATPDQNRQSTNNLYGNEAPKISSSNNEFSFPSKMEIQNDDE 249
           SP AA TT +T+AT  AA AT      +T+NL  NEA     + +     S MEIQN+  
Sbjct: 192 SPPAASTTTSTSATVTAAPATATA-AAATSNLNRNEAAVAPRTPS-----SMMEIQNNVV 251

Query: 250 LPKTTTFEDDDIQSWIMDLSG 269
           L +    +DDDI+S IMD +G
Sbjct: 252 LAEIFE-DDDDIKSLIMDFAG 252

[Close]

BLAST of MS012263 vs. NCBI nr
Match: KAG7025116.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 250.8 bits (639), Expect = 1.4e-62
Identity = 153/262 (58.40%), Postives = 182/262 (69.47%), Query Frame = 0


Query: 10  FRRISEEQEVSVIVDALTKVVSGAVAKGLQFRPDHFLHLLSPISSLSDSASTSLNDAVLP 69
           F R+++EQE  VIVDALT+VVSGA A GL+FR DHFL LL P S+   + +T++     P
Sbjct: 10  FPRLTDEQEGLVIVDALTQVVSGAAAAGLEFRHDHFLRLLHPPST---NTTTTI---FPP 69

Query: 70  LSDFDTCHVCRIKGCLGCNFF--PPSSQSDDRKKLGVGGGGRKAKRLKKNYRGVRQRPWG 129
            SDFDTCH+CRI GCLGCNFF  P S Q            GR+ +RLKKNYRGVRQRPWG
Sbjct: 70  SSDFDTCHICRISGCLGCNFFSTPSSHQPTTTTTDKNNNSGRRVRRLKKNYRGVRQRPWG 129

Query: 130 KWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFPFPDNSL-TFNLPN 189
           KWAAEIRDPK+A RVWLGTFNTAE+AARAYDEAAI+FRGPRA+LNFP  DNSL TF   N
Sbjct: 130 KWAAEIRDPKRAARVWLGTFNTAEEAARAYDEAAIKFRGPRARLNFPSSDNSLMTF---N 189

Query: 190 FSPAAAVTTAATAATAAAATATPDQNRQSTNNLYGNEAPKISSSNNEFSFPSKMEIQNDD 249
           +SP AA TT +T+AT  AA AT      +T+N   NEA     + +     S MEIQN+ 
Sbjct: 190 YSPPAASTTTSTSATVTAAPATATA-AAATSNFNPNEAAVAPRTPS-----SMMEIQNNV 249

Query: 250 ELPKTTTFEDDDIQSWIMDLSG 269
            L +    +DDDI+S IMD +G
Sbjct: 250 VLAEIFE-DDDDIKSLIMDFAG 255

[Close]

BLAST of MS012263 vs. ExPASy Swiss-Prot
Match: Q9SZ06 (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana OX=3702 GN=ERF109 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 6.6e-39
Identity = 109/228 (47.81%), Postives = 133/228 (58.33%), Query Frame = 0


Query: 12  RISEEQEVSVIVDALTKVVSGAVAKGLQFRPDHFLHLLSPISSLSDSASTSLNDAVLPLS 71
           ++S EQE+SVIV AL  V+SG              +  +P      S+ +++  A +P  
Sbjct: 23  QLSPEQELSVIVSALQHVISGE-------------NETAPCQGF--SSDSTVISAGMPRL 82

Query: 72  DFDTCHVCRIKGCLGCN-FFPP--------------SSQSDDR-------KKLGVGGGGR 131
           D DTC VCRI+GCLGCN FF P              +S S+ R       KK   GG  R
Sbjct: 83  DSDTCQVCRIEGCLGCNYFFAPNQRIEKNHQQEEEITSSSNRRRESSPVAKKAEGGGKIR 142

Query: 132 KAKRLKKNYRGVRQRPWGKWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRA 191
           K K  K  YRGVRQRPWGK+AAEIRDPK+ATRVWLGTF TAEDAARAYD AAI FRGPRA
Sbjct: 143 KRKNKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRA 202

Query: 192 KLNFPFPDNSLTFNLPNFSPAAAVTTAATAATAAAATATPDQNRQSTN 218
           KLNFPF D + + +    SP AA    A A+ +A+ +AT     +  N
Sbjct: 203 KLNFPFVDYTSSVS----SPVAADDIGAKASASASVSATDSVEAEQWN 231

[Close]

BLAST of MS012263 vs. ExPASy Swiss-Prot
Match: Q70II3 (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 1.7e-23
Identity = 51/65 (78.46%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 110 KAKRLKKNYRGVRQRPWGKWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRA 169
           +A+  K+ YRGVRQRPWGKWAAEIRDP +A RVWLGTF+TAE AARAYDEAA+RFRG +A
Sbjct: 69  EAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKA 128

Query: 170 KLNFP 175
           KLNFP
Sbjct: 129 KLNFP 133

[Close]

BLAST of MS012263 vs. ExPASy Swiss-Prot
Match: Q7G1L2 (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 8.6e-23
Identity = 50/59 (84.75%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 116 KNYRGVRQRPWGKWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFP 175
           K YRGVRQRPWGKWAAEIRDP +ATRVWLGTF TAE AARAYD AA+RFRG +AKLNFP
Sbjct: 59  KKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFP 117

[Close]

BLAST of MS012263 vs. ExPASy Swiss-Prot
Match: P93007 (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 GN=ERF112 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.5e-22
Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = 0


Query: 92  PSSQSDDRKKLGVGGGGRKAKRLKKNYRGVRQRPWGKWAAEIRDPKQATRVWLGTFNTAE 151
           PSS  D    L +     K+   ++NYRGVRQRPWGKWAAEIRDP +A RVWLGTF+TAE
Sbjct: 47  PSSIDDQSSSLTL---QEKSNSRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAE 106

Query: 152 DAARAYDEAAIRFRGPRAKLNFP 175
           +AA AYD+AA  FRG +AKLNFP
Sbjct: 107 EAALAYDKAAFEFRGHKAKLNFP 126

[Close]

BLAST of MS012263 vs. ExPASy Swiss-Prot
Match: Q9FH54 (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 GN=ERF114 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.3e-22
Identity = 47/60 (78.33%), Postives = 55/60 (91.67%), Query Frame = 0


Query: 115 KKNYRGVRQRPWGKWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFP 174
           +++YRGVRQRPWGKWAAEIRDPK+A RVWLGTF TAE AA AYDEAA++F+G +AKLNFP
Sbjct: 87  RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFP 146

[Close]

BLAST of MS012263 vs. ExPASy TrEMBL
Match: A0A6J1C369 (ethylene-responsive transcription factor ERF109-like OS=Momordica charantia OX=3673 GN=LOC111007835 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 6.8e-148
Identity = 271/274 (98.91%), Postives = 271/274 (98.91%), Query Frame = 0


Query: 1   MQMTSDRPPFRRISEEQEVSVIVDALTKVVSGAVAKGLQFRPDHFLHLLSPISSLSDSAS 60
           MQMTSDRPPFRRISEEQEVSVIVDALTKVVSGAVAKGLQFRPDHFLHLLSPISSLSDSAS
Sbjct: 1   MQMTSDRPPFRRISEEQEVSVIVDALTKVVSGAVAKGLQFRPDHFLHLLSPISSLSDSAS 60

Query: 61  TSLNDAVLPLSDFDTCHVCRIKGCLGCNFFPPSSQSDDRKKLGVGGGGRKAKRLKKNYRG 120
           TSLNDAVLPLSDFDTCHVCRIKGCLGCNFFPPSSQSDDRKKLGVGGGGRKAKRLKKNYRG
Sbjct: 61  TSLNDAVLPLSDFDTCHVCRIKGCLGCNFFPPSSQSDDRKKLGVGGGGRKAKRLKKNYRG 120

Query: 121 VRQRPWGKWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFPFPDNSL 180
           VRQRPWGKWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFPFPDNSL
Sbjct: 121 VRQRPWGKWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFPFPDNSL 180

Query: 181 TFNLPNFSPAAAVTTAATAATAAAATATPDQNRQSTNNLYGNEAPKISSSNNEFSFPSKM 240
           TFNLPNFSPAAAVT   TAATAAAATATPDQNRQSTNNLYGNEAPKISSSNNEFSFPSKM
Sbjct: 181 TFNLPNFSPAAAVT---TAATAAAATATPDQNRQSTNNLYGNEAPKISSSNNEFSFPSKM 240

Query: 241 EIQNDDELPKTTTFEDDDIQSWIMDLSGGQSLSW 275
           EIQNDDELPKTTTFEDDDIQSWIMDLSGGQSLSW
Sbjct: 241 EIQNDDELPKTTTFEDDDIQSWIMDLSGGQSLSW 271

[Close]

BLAST of MS012263 vs. ExPASy TrEMBL
Match: A0A2H4V3T2 (Ethylene-responsive transcription factor OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 6.5e-66
Identity = 165/282 (58.51%), Postives = 191/282 (67.73%), Query Frame = 0


Query: 1   MQMTSDR-PPFRRISEEQEVSVIVDALTKVVSGAVAKGLQFRPDHFLHLLSPISSLSDSA 60
           M   SDR  PFRRI++EQE+SVIVDALT+VVSG  A GL+F+ D FL LL P        
Sbjct: 1   MVTASDRLHPFRRITDEQELSVIVDALTQVVSGPAADGLEFQHDRFLRLLLP-------- 60

Query: 61  STSLNDAVL--PLSDFDTCHVCRIKGCLGCNFFPPSSQSDDRKKLGVGGGGRKAKRLKKN 120
             S NDA +  P SDFDTCHVCRI GCLGCNFF   S             GR+ +R KKN
Sbjct: 61  --SANDAAVFPPSSDFDTCHVCRISGCLGCNFFSAPSSHQQPTTANSNNSGRRVRRQKKN 120

Query: 121 YRGVRQRPWGKWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFPFPD 180
           YRGVRQRPWGKWAAEIRDPK+A RVWLGTFNTAEDAARAYD AAI+FRGPRA+LNFP  D
Sbjct: 121 YRGVRQRPWGKWAAEIRDPKRAARVWLGTFNTAEDAARAYDAAAIKFRGPRARLNFPSTD 180

Query: 181 NSL-TFNLPNFSPAAAVTTAATAATAAAATATPDQNRQSTNNLYGNE---APKISSSNNE 240
            SL TF   N+SP AA T+ +T +TAAAATA       +T+ L+ NE   AP+ SSS   
Sbjct: 181 TSLMTF---NYSPPAASTSTST-STAAAATA-------ATSTLFQNEAAVAPRTSSS--- 240

Query: 241 FSFPSKME-IQNDDELPKTTTFEDDDIQSWIMDLSGGQSLSW 275
               +KME IQN+   P+    EDDD+Q+ IMD + GQS SW
Sbjct: 241 ----TKMEIIQNEVVFPEMLD-EDDDLQTLIMDFA-GQSRSW 252

[Close]

BLAST of MS012263 vs. ExPASy TrEMBL
Match: A0A6J1EJ70 (ethylene-responsive transcription factor 11-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434632 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 6.8e-63
Identity = 153/262 (58.40%), Postives = 182/262 (69.47%), Query Frame = 0


Query: 10  FRRISEEQEVSVIVDALTKVVSGAVAKGLQFRPDHFLHLLSPISSLSDSASTSLNDAVLP 69
           F R+++EQE  VIVDALT+VVSGA A GL+FR DHFL LL P S+   + +T++     P
Sbjct: 12  FPRLTDEQEGLVIVDALTQVVSGAAAAGLEFRHDHFLRLLHPPST---NTTTTI---FPP 71

Query: 70  LSDFDTCHVCRIKGCLGCNFF--PPSSQSDDRKKLGVGGGGRKAKRLKKNYRGVRQRPWG 129
            SDFDTCH+CRI GCLGCNFF  P S Q            GR+ +RLKKNYRGVRQRPWG
Sbjct: 72  SSDFDTCHICRISGCLGCNFFSTPSSHQPTTTTTDKNNNSGRRVRRLKKNYRGVRQRPWG 131

Query: 130 KWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFPFPDNSL-TFNLPN 189
           KWAAEIRDPK+A RVWLGTFNTAE+AARAYDEAAI+FRGPRA+LNFP  DNSL TF   N
Sbjct: 132 KWAAEIRDPKRAARVWLGTFNTAEEAARAYDEAAIKFRGPRARLNFPSSDNSLMTF---N 191

Query: 190 FSPAAAVTTAATAATAAAATATPDQNRQSTNNLYGNEAPKISSSNNEFSFPSKMEIQNDD 249
           +SP AA TT +T+AT  AA AT      +T+N   NEA     + +     S MEIQN+ 
Sbjct: 192 YSPPAASTTTSTSATVTAAPATATA-AAATSNFNPNEAAVAPRTPS-----SMMEIQNNV 251

Query: 250 ELPKTTTFEDDDIQSWIMDLSG 269
            L +    +DDDI+S IMD +G
Sbjct: 252 VLAEIFE-DDDDIKSLIMDFAG 257

[Close]

BLAST of MS012263 vs. ExPASy TrEMBL
Match: A0A6J1EQ36 (ethylene-responsive transcription factor 11-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434632 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.7e-61
Identity = 150/262 (57.25%), Postives = 178/262 (67.94%), Query Frame = 0


Query: 10  FRRISEEQEVSVIVDALTKVVSGAVAKGLQFRPDHFLHLLSPISSLSDSASTSLNDAVLP 69
           F R+++EQE  VIVDALT+VVSGA A GL+FR DHFL LL P S+   + +T++     P
Sbjct: 12  FPRLTDEQEGLVIVDALTQVVSGAAAAGLEFRHDHFLRLLHPPST---NTTTTI---FPP 71

Query: 70  LSDFDTCHVCRIKGCLGCNFF--PPSSQSDDRKKLGVGGGGRKAKRLKKNYRGVRQRPWG 129
            SDFDTCH+CRI GCLGCNFF  P S Q            GR+ +RLKKNYRGVRQRPWG
Sbjct: 72  SSDFDTCHICRISGCLGCNFFSTPSSHQPTTTTTDKNNNSGRRVRRLKKNYRGVRQRPWG 131

Query: 130 KWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFPFPDNSL-TFNLPN 189
           KWAAEIRDPK+A RVWLGTFNTAE+AARAYDEAAI+FRGPRA+LNFP  DNSL TF   N
Sbjct: 132 KWAAEIRDPKRAARVWLGTFNTAEEAARAYDEAAIKFRGPRARLNFPSSDNSLMTF---N 191

Query: 190 FSPAAAVTTAATAATAAAATATPDQNRQSTNNLYGNEAPKISSSNNEFSFPSKMEIQNDD 249
           +SP AA TT +T+AT  A           T+N   NEA     + +     S MEIQN+ 
Sbjct: 192 YSPPAASTTTSTSATVTA-----------TSNFNPNEAAVAPRTPS-----SMMEIQNNV 247

Query: 250 ELPKTTTFEDDDIQSWIMDLSG 269
            L +    +DDDI+S IMD +G
Sbjct: 252 VLAEIFE-DDDDIKSLIMDFAG 247

[Close]

BLAST of MS012263 vs. ExPASy TrEMBL
Match: A0A6J1JIJ7 (ethylene-responsive transcription factor 11-like OS=Cucurbita maxima OX=3661 GN=LOC111486119 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 8.3e-61
Identity = 148/265 (55.85%), Postives = 177/265 (66.79%), Query Frame = 0


Query: 10  FRRISEEQEVSVIVDALTKVVSGAVAKGLQFRPDHFLHLLSPISSLSDSASTSLNDAVLP 69
           F R+++EQE  VIVDALT+VVSGA A GL+FR DHFL LL P S      + +      P
Sbjct: 12  FPRLTDEQEGVVIVDALTQVVSGAAAAGLEFRHDHFLRLLHPPS------TNNTTTIFPP 71

Query: 70  LSDFDTCHVCRIKGCLGCNFF------PPSSQSDDRKKLGVGGGGRKAKRLKKNYRGVRQ 129
            SDFDTCH+CRI GCLGCNFF       P++ + D+        GR+ +RLKKNYRGVRQ
Sbjct: 72  SSDFDTCHICRISGCLGCNFFSTPYSHQPTTTTTDKNN---NNSGRRIRRLKKNYRGVRQ 131

Query: 130 RPWGKWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFPFPDNSLTFN 189
           RPWGKWAAEIRDPK+A RVWLGTFNTAE+AARAYDEAAI+FRGPRA+LNFP  DNSLT  
Sbjct: 132 RPWGKWAAEIRDPKRAARVWLGTFNTAEEAARAYDEAAIKFRGPRARLNFPSSDNSLT-- 191

Query: 190 LPNFSPAAAVTTAATAATAAAATATPDQNRQSTNNLYGNEAPKISSSNNEFSFPSKMEIQ 249
             N+SP AA TT +T+AT    TAT + NR          AP+  S        S M+IQ
Sbjct: 192 TFNYSPPAASTTTSTSAT---VTATSNFNRNE-----AAVAPRTPS--------SMMKIQ 248

Query: 250 NDDELPKTTTFEDDDIQSWIMDLSG 269
           N+  L +    +DDDI+S IMD +G
Sbjct: 252 NNVVLAEIFE-DDDDIKSLIMDFAG 248

[Close]

BLAST of MS012263 vs. TAIR 10
Match: AT4G34410.1 (redox responsive transcription factor 1 )

HSP 1 Score: 162.5 bits (410), Expect = 4.7e-40
Identity = 109/228 (47.81%), Postives = 133/228 (58.33%), Query Frame = 0


Query: 12  RISEEQEVSVIVDALTKVVSGAVAKGLQFRPDHFLHLLSPISSLSDSASTSLNDAVLPLS 71
           ++S EQE+SVIV AL  V+SG              +  +P      S+ +++  A +P  
Sbjct: 23  QLSPEQELSVIVSALQHVISGE-------------NETAPCQGF--SSDSTVISAGMPRL 82

Query: 72  DFDTCHVCRIKGCLGCN-FFPP--------------SSQSDDR-------KKLGVGGGGR 131
           D DTC VCRI+GCLGCN FF P              +S S+ R       KK   GG  R
Sbjct: 83  DSDTCQVCRIEGCLGCNYFFAPNQRIEKNHQQEEEITSSSNRRRESSPVAKKAEGGGKIR 142

Query: 132 KAKRLKKNYRGVRQRPWGKWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRA 191
           K K  K  YRGVRQRPWGK+AAEIRDPK+ATRVWLGTF TAEDAARAYD AAI FRGPRA
Sbjct: 143 KRKNKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRA 202

Query: 192 KLNFPFPDNSLTFNLPNFSPAAAVTTAATAATAAAATATPDQNRQSTN 218
           KLNFPF D + + +    SP AA    A A+ +A+ +AT     +  N
Sbjct: 203 KLNFPFVDYTSSVS----SPVAADDIGAKASASASVSATDSVEAEQWN 231

[Close]

BLAST of MS012263 vs. TAIR 10
Match: AT5G50080.1 (ethylene response factor 110 )

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-24
Identity = 51/65 (78.46%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 110 KAKRLKKNYRGVRQRPWGKWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRA 169
           +A+  K+ YRGVRQRPWGKWAAEIRDP +A RVWLGTF+TAE AARAYDEAA+RFRG +A
Sbjct: 69  EAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKA 128

Query: 170 KLNFP 175
           KLNFP
Sbjct: 129 KLNFP 133

[Close]

BLAST of MS012263 vs. TAIR 10
Match: AT1G43160.1 (related to AP2 6 )

HSP 1 Score: 109.0 bits (271), Expect = 6.1e-24
Identity = 50/59 (84.75%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 116 KNYRGVRQRPWGKWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFP 175
           K YRGVRQRPWGKWAAEIRDP +ATRVWLGTF TAE AARAYD AA+RFRG +AKLNFP
Sbjct: 59  KKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFP 117

[Close]

BLAST of MS012263 vs. TAIR 10
Match: AT2G33710.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.8e-23
Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = 0


Query: 92  PSSQSDDRKKLGVGGGGRKAKRLKKNYRGVRQRPWGKWAAEIRDPKQATRVWLGTFNTAE 151
           PSS  D    L +     K+   ++NYRGVRQRPWGKWAAEIRDP +A RVWLGTF+TAE
Sbjct: 47  PSSIDDQSSSLTL---QEKSNSRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAE 106

Query: 152 DAARAYDEAAIRFRGPRAKLNFP 175
           +AA AYD+AA  FRG +AKLNFP
Sbjct: 107 EAALAYDKAAFEFRGHKAKLNFP 126

[Close]

BLAST of MS012263 vs. TAIR 10
Match: AT5G61890.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 107.1 bits (266), Expect = 2.3e-23
Identity = 47/60 (78.33%), Postives = 55/60 (91.67%), Query Frame = 0


Query: 115 KKNYRGVRQRPWGKWAAEIRDPKQATRVWLGTFNTAEDAARAYDEAAIRFRGPRAKLNFP 174
           +++YRGVRQRPWGKWAAEIRDPK+A RVWLGTF TAE AA AYDEAA++F+G +AKLNFP
Sbjct: 87  RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFP 146

The following BLAST results are available for this feature:

BLAST of MS012263 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136049.1	1.4e-147	98.91	ethylene-responsive transcription factor ERF109-like [Momordica charantia]	[more]
XP_038888403.1	1.0e-65	57.76	ethylene-responsive transcription factor ERF109-like [Benincasa hispida]	[more]
AUB30293.1	1.4e-65	58.51	ethylene-responsive transcription factor [Luffa aegyptiaca]	[more]
XP_023530126.1	3.7e-63	58.24	ethylene-responsive transcription factor 11-like [Cucurbita pepo subsp. pepo]	[more]
KAG7025116.1	1.4e-62	58.40	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of MS012263 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZ06	6.6e-39	47.81	Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q70II3	1.7e-23	78.46	Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q7G1L2	8.6e-23	84.75	Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 ...	[more]
P93007	2.5e-22	63.86	Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FH54	3.3e-22	78.33	Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of MS012263 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C369	6.8e-148	98.91	ethylene-responsive transcription factor ERF109-like OS=Momordica charantia OX=3...	[more]
A0A2H4V3T2	6.5e-66	58.51	Ethylene-responsive transcription factor OS=Luffa aegyptiaca OX=3670 PE=2 SV=1	[more]
A0A6J1EJ70	6.8e-63	58.40	ethylene-responsive transcription factor 11-like isoform X1 OS=Cucurbita moschat...	[more]
A0A6J1EQ36	1.7e-61	57.25	ethylene-responsive transcription factor 11-like isoform X2 OS=Cucurbita moschat...	[more]
A0A6J1JIJ7	8.3e-61	55.85	ethylene-responsive transcription factor 11-like OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of MS012263 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34410.1	4.7e-40	47.81	redox responsive transcription factor 1	[more]
AT5G50080.1	1.2e-24	78.46	ethylene response factor 110	[more]
AT1G43160.1	6.1e-24	84.75	related to AP2 6	[more]
AT2G33710.1	1.8e-23	63.86	Integrase-type DNA-binding superfamily protein	[more]
AT5G61890.1	2.3e-23	78.33	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 140..156 score: 72.19 coord: 118..129 score: 76.67
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 117..180 e-value: 2.7E-41 score: 153.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 117..166 e-value: 3.6E-15 score: 56.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 117..174 score: 24.987495
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 116..174 e-value: 1.86924E-37 score: 124.691
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 116..175 e-value: 3.3E-29 score: 102.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..236
None	No IPR available	PANTHER	PTHR31677:SF107	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109	coord: 11..226
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 11..226
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 117..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS012263.1	MS012263.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity