MS012224 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTGCAGTGGCAACAAATGGACATCGAATATACATTCTGGCAAATGCTTCATCTATGCACTTCACCAAAAGTTGTGTACGTATTGGTTCTTATTGCTTATCGTCACTCTCTAAAACCTGTTGCAATCTTTGTTTCAATTTTATTTTAGCCCTTCCTAATCATTTCTATTTGTATTTTCTGTGGAATTTTGCTATGGACGCAGTTATCAGCATACCAAGTATCACAAGCGTAAGTCCATCTCCCATCAAAGAGTTTTGTTTTGTTTTGCTTTTTGTACTGATTGTAATGATGTCAACGAATCTATTACCATACTCATATGTGATTTATGGATATGTGTAATTCAGTTTTTAAGTTCAGTTCTACTCTAATGTGCACTTTGCCCTTTAACTCTGTGTTGAGTTCCTCTAATAGTTAACTTACTACCAACATACGATGCCAATAGGTGGAGTAATTGAATTTGTAGTTAAATTCAAAATGAATTCATTTACTAAAAGAAGGCAGGGGTTTATACTCAGGTCGATACTTAGAGGTGTTGGATTTGCATGCATATTGCTTAGGGAAATCTTATTGCTACATTTAACTTTTTACTCAAATATTGGTGAAATAGGTGATGGAAGTGGACCAGTTTCGTAGACGATTCTTAGGTCTCCGACTCTTGCTTGTTTGTGTGCTTCTTCTTTTGTTGTTCAGGTCTCCTTCTCAGTCGTGTTGGGATGCTTCTCACAATAACTTTTAGTTAATGTCAAAAGTATAAGATATAGGATGGAGAAATCATCGTCAACCTAAAATAATAAGAGATTGAAGAGAAAAGTGATGGAGACAGACCTTTTATGTAAAGGACCTGATTCCTAGTTTTGTTTGTATGCTTCCTTTTTGTGTGTGTGTGTTGGGTGTTTTTCACATCCTCTTTCTCTTTGGTTAGGATTTGTGATTTTGTTAAATTTTCTCTTATCCATTAAAAATATTAGGTGGAGTGACCCAACGGCCAACCCAAAACAAATTCATTTTTTAATTGATTTGACATTCAATCTTTAACATGTTCGTTGCGTACTAGTTAGCTGTGATTGATGAGTAGACGCCCGTCGGGCGTTGGGTGATTTGACACAGATGTGGGTTCTCTAGTTGAAATAAAGTCAAAGAACTTTCCAGCATTTTTATGATATTAACAAACTCGACCATAGAGGCTCTTACATGGGATCATTACTAGTGTGGGTTTTAAACCCAAGATCAATATCTAATCTCCCTTTTTTTTCTTCTTTTTCTTCTTTTGTTTTTTTTTTCTGGTTGAGTGCAGTGGAGAATCGAACCATTGACCTTTGAGATGGCAATAGGTTTCTTACCATTAAGCTATTTTCAGACTAAACTTTTATATTTAATATGTGATTTTATCATTTTTTTTTATATGCATAAAAATTTATGGTATGTCTCCTTTCATCTGAAAATTACAAAAAAAAGTTGGTTAGCAGTATTCTTTTACTGGTTCTACCAAGTTTAATTGCAGATATGATACCTTCAGTGAGCTTCTTTGTTTAGAAAAAAATTTCAAAACCAAACTAAAAAGTAAATTTGCAGATAAGAACTGGTTTGCAATTTTTCTTGATCAAATCATTACAAATTTGTCTTGAATCTTAACAATAGATGTAATAATAGGATCTTTGGAACAAGGGAACAATAGAACCTTTGGTGGGAAGGAGAGAAACCACAATTATATTTATGATCTCATTTTGTATACAGCAGCCACTTGGTGCAAGCTAGATAGTTTTTCCTTTTTCTTTTTTTTTTTTTTTTAAATTATTTGCTTAGTGATATTTATGCTAATTGGAGGGGTTTTTTTAACCCTCATTAGCCTTGGAGGTCTTCTTCTCTTTTATATATTTAATNTAACAATGGATGTAATATGTCTAGTATAAAGGTTTTCCACTTATATAGAATTTAAATGAAAAGTTGTTTGCTTCTTTCTTGTGTCAGAAACTAAGAATCAATGGGCACGTGATGATCCTGCTTTTGTTGTGATCTGCAGTCTTCTTTTGACAGTTGCAACTTTGGCTTACTGTGCTGCGTAAGTGTAACCAATGCTTCTGCGTAGTATCTCTTTGTTGGTCTATTTTATAATGAAGCATGCGTCCATAAGGTTGTTCCTTTCCAAAATGTTTTTTTGTGCATGTGTTTGTGTGAGAGAGAGCGAGAGTCTTGACAAGAAGGTGTATCAGCCTCCACCTCTCTCTCACACATAACACAGACATGCACCTGCACAAACACCCAAAAAAAAAAAAATTGAAATAAACATGTACACTTATACGCTTCATGTGATAATTGATTTCTTTTCTTTTGATTGGTTGTGGTTGAACTTTCTTTCATATATACACTTCTTTGTATGAAGTCGTCTATTAAGAAATCCAGCTAGTTTACGCCTTAGTTGTGTTTTCTGATTGCATTTTGTTAAAAATTTCAGATATGATCATAGTGCAGCACATGCCACTTTTGTAGTTATTTCAGTACTGCTCTTCCATTTGCTAATAACTGGGGCGATTTTGGCTACTTGTTGTTGGTAAGCTATTTCCCTGTTGTGAGTGCATGTTACTATATGATTTTACCAGCAAATTATTTTTCTATCCACACAAGAAATATTCGTCATTTGCTATAATCTTGAATGGATCTTACGTACTGGATATTGACTAATTATTTGTTCTCTTGGCGATCCTTATTTGCATTTAGGACTTGAATCGTCCCAATTAGATGTGCCTTGTCTAATGCTTCCTGACTTTAATTTCAGATATTTGTTTCTGCACTGAGTGAAATAGACACATGGACAATGTGAATGAAAGTTAGATTAAGGGTGATCAGCTAGTTTGACCACATGACTAAAACATTCTCAGAAGAGTTCATCTCTTTACATATATTTTGGTGGATCCTATCTTCTAGCTAACGGTTGACATCGACACCAAAGATATGAGCCACCCTAATTTGATGTAGTATGGTAAATGTATAACTTCCCTGTTACTCATGTTGAGTAAGAGTTTGTACAACAGTGCGTTTAAGGAACCATAAGGGTTATCGGCTAAAGAGATGATGTGGCTTAAAACAAATAATAGGCAATCTAGCCTGTTTTCCATTTCCTTCTTGTTGAGGTCCTCTGTATTATGACAGTTTCCTATATTGAAATTAAATTATGTCGAAGTTGCATTTGTATGAAGTTCACACATTGCCTCAATCTTTATTGTTCAAAATATTTTTTTAGTCTACTGATATAATTTATAGTGCATAATTTCATTACTCAAATGTACTTTCAGGTTACTAACAAATGCTTACCTTCGGGAAGAGACACCAGGCAGTCATGTAGTTGAGCAACGGGTTGAATGGCAAGATCTACTACTCTCAATTTTTGCTTTATTCAGGATTGTTTATAACTTCATTTCAACTACACTTCTGTTAAATATCGGTTTTTTGGACCAAATATTTTTAAACCGTTCTTTTAGTCTTGCTTTTCCAGTGGCCTTTTGAGTTTACTGTTCTATTATATTTACACAATGTCTTCCCCTTGAGTCTTATAAATCAGTGGATTGATATATGGTTTATTTATTAATTTATTTTATTTTCACTGGTTCAAGGCTCTATGCATTTGATGTGCACTGCAATTCTTTCTTCCCAATGTTTGTTTTGCTTTACGGTAAGTATGATAAGGGATTCTGTTTTTGTTTTGTTTTCCAACATCTATAATGCTATCTGAAGTCTTGGTTTCGTTGCAGTGATCCATTACTTTATATCACCGCTTCTGGTGGCTCATGGCTTCATCCCATTATTGCTATCAAATATGCTTTTCATGATTGGGGCTTCATACTACCATTACGTCAACTTTTTAGGTTATGATGGTAAGCTACATTTTCTATGATGATCCTTTCTGGTCTATATATTATTGTGTTCTTGAATAAATATTTCAAGGAATACTGAACCAGAGAGGACAAAGCCTTTTTCTCTTCATGTCTAGAACTTTTTGGTTTTTTTAGAAATTATAGGCAGGTGCCATTTAGAAAATCGTGCTTTGGATTTTAACCTAAAGGTTATTATATCTATGAGATTGAGAGTACGTTTGGGATGACATTTTTAGTACTTTGATTTAATTTATAAATATATATGTTAGTACTTTTAGGAAATGTTCTAATTAAATACTTCTGAAAAAGTGCTTTTAATTTGTTAAAAATACCAAGACAACTCATGTCAAACTCATCCAGTATTCTAATCAATCGAGGGCATGATTGAAAGGTGGGATGGGGGTGGAGTTAGTGAAATTAAGAATGATTTTAACTCGATGGATGGCCAGTGAATGAGATAAAAATGTGTTGGTTAAAACTTTTTGAGTTTACAGTTGGTTGAGGTGAGAGGAAGTGTATGTTCCCTAACTTCTAGCTCGTCTCAGTCTATACCGGACTGTAGTTGAAAGTCTTGTTCAAATTAATTGAAGTATTGGTAGGGAGAACCTGATGATAGTAACTATTACTGGAGGAAAAATTAACCCCTGACACATTAGCGAAGGAAATGAATAATTAAGTTCCTGTGTTCTAATAAAATAATCCTTAACATCTTATCCAAAATAATAATCCTTAACAGAAACCATTGCTATATTTGAGTTTCTTTCAGTTAGTAGTTTCTGATTAGCCGCAAGATTGGTTCCATGAAACTATTGACCGTGTACCCAAATGCAGTACTGCCATTTTTGGAGAAAACTACTTTCTTCCTCTATCCAATTGGTGTGGTCTTTGTCCTCACTCCAATCTGTAAGTCATAATGAAACCCTGAACTCCATTTTTCCAGAGCTCTTGTGCTGAAAGTAAATCTCATTTTCTTTTTTTGGCCGCAGTTATCTTGATTGGCTTCAACCCTTCAAGATATTTCATGAACATGTACTTTAGTCAGAACTTA TTGCAGTGGCAACAAATGGACATCGAATATACATTCTGGCAAATGCTTCATCTATGCACTTCACCAAAAGTTGTGTACGTATTGGTTCTTATTGCTTATCAAACTAAGAATCAATGGGCACGTGATGATCCTGCTTTTGTTGTGATCTGCAGTCTTCTTTTGACAGTTGCAACTTTGGCTTACTGTGCTGCATATGATCATAGTGCAGCACATGCCACTTTTGTAGTTATTTCAGTACTGCTCTTCCATTTGCTAATAACTGGGGCGATTTTGGCTACTTGTTGTTGGTTACTAACAAATGCTTACCTTCGGGAAGAGACACCAGGCAGTCATGTAGTTGAGCAACGGGTTGAATGGCAAGATCTACTACTCTCAATTTTTGCTTTATTCAGGATTGTTTATAACTTCATTTCAACTACACTTCTGCTCTATGCATTTGATGTGCACTGCAATTCTTTCTTCCCAATGTTTGTTTTGCTTTACGTGATCCATTACTTTATATCACCGCTTCTGGTGGCTCATGGCTTCATCCCATTATTGCTATCAAATATGCTTTTCATGATTGGGGCTTCATACTACCATTACGTCAACTTTTTAGGTTATGATGTACTGCCATTTTTGGAGAAAACTACTTTCTTCCTCTATCCAATTGGTGTGGTCTTTGTCCTCACTCCAATCTTTATCTTGATTGGCTTCAACCCTTCAAGATATTTCATGAACATGTACTTTAGTCAGAACTTA TTGCAGTGGCAACAAATGGACATCGAATATACATTCTGGCAAATGCTTCATCTATGCACTTCACCAAAAGTTGTGTACGTATTGGTTCTTATTGCTTATCAAACTAAGAATCAATGGGCACGTGATGATCCTGCTTTTGTTGTGATCTGCAGTCTTCTTTTGACAGTTGCAACTTTGGCTTACTGTGCTGCATATGATCATAGTGCAGCACATGCCACTTTTGTAGTTATTTCAGTACTGCTCTTCCATTTGCTAATAACTGGGGCGATTTTGGCTACTTGTTGTTGGTTACTAACAAATGCTTACCTTCGGGAAGAGACACCAGGCAGTCATGTAGTTGAGCAACGGGTTGAATGGCAAGATCTACTACTCTCAATTTTTGCTTTATTCAGGATTGTTTATAACTTCATTTCAACTACACTTCTGCTCTATGCATTTGATGTGCACTGCAATTCTTTCTTCCCAATGTTTGTTTTGCTTTACGTGATCCATTACTTTATATCACCGCTTCTGGTGGCTCATGGCTTCATCCCATTATTGCTATCAAATATGCTTTTCATGATTGGGGCTTCATACTACCATTACGTCAACTTTTTAGGTTATGATGTACTGCCATTTTTGGAGAAAACTACTTTCTTCCTCTATCCAATTGGTGTGGTCTTTGTCCTCACTCCAATCTTTATCTTGATTGGCTTCAACCCTTCAAGATATTTCATGAACATGTACTTTAGTCAGAACTTA LQWQQMDIEYTFWQMLHLCTSPKVVYVLVLIAYQTKNQWARDDPAFVVICSLLLTVATLAYCAAYDHSAAHATFVVISVLLFHLLITGAILATCCWLLTNAYLREETPGSHVVEQRVEWQDLLLSIFALFRIVYNFISTTLLLYAFDVHCNSFFPMFVLLYVIHYFISPLLVAHGFIPLLLSNMLFMIGASYYHYVNFLGYDVLPFLEKTTFFLYPIGVVFVLTPIFILIGFNPSRYFMNMYFSQNL Homology
BLAST of MS012224 vs. NCBI nr
Match: XP_022148731.1 (protein unc-50 homolog [Momordica charantia]) HSP 1 Score: 413.3 bits (1061), Expect = 1.5e-111 Identity = 215/247 (87.04%), Postives = 217/247 (87.85%), Query Frame = 0
BLAST of MS012224 vs. NCBI nr
Match: XP_004136958.1 (protein unc-50 homolog [Cucumis sativus] >KGN43880.1 hypothetical protein Csa_017158 [Cucumis sativus]) HSP 1 Score: 408.3 bits (1048), Expect = 4.7e-110 Identity = 211/247 (85.43%), Postives = 216/247 (87.45%), Query Frame = 0
BLAST of MS012224 vs. NCBI nr
Match: XP_008454998.1 (PREDICTED: protein unc-50 homolog [Cucumis melo] >TYK06793.1 protein unc-50-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 407.9 bits (1047), Expect = 6.2e-110 Identity = 211/247 (85.43%), Postives = 216/247 (87.45%), Query Frame = 0
BLAST of MS012224 vs. NCBI nr
Match: KAA0031340.1 (protein unc-50-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 406.0 bits (1042), Expect = 2.3e-109 Identity = 212/247 (85.83%), Postives = 222/247 (89.88%), Query Frame = 0
BLAST of MS012224 vs. NCBI nr
Match: XP_038888497.1 (protein unc-50 homolog [Benincasa hispida]) HSP 1 Score: 404.4 bits (1038), Expect = 6.8e-109 Identity = 209/247 (84.62%), Postives = 215/247 (87.04%), Query Frame = 0
BLAST of MS012224 vs. ExPASy Swiss-Prot
Match: Q54DD7 (Protein unc-50 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0292320 PE=3 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 2.1e-44 Identity = 101/246 (41.06%), Postives = 146/246 (59.35%), Query Frame = 0
BLAST of MS012224 vs. ExPASy Swiss-Prot
Match: Q10045 (Protein unc-50 OS=Caenorhabditis elegans OX=6239 GN=unc-50 PE=2 SV=2) HSP 1 Score: 130.2 bits (326), Expect = 3.3e-29 Identity = 89/244 (36.48%), Postives = 130/244 (53.28%), Query Frame = 0
BLAST of MS012224 vs. ExPASy Swiss-Prot
Match: Q53HI1 (Protein unc-50 homolog OS=Homo sapiens OX=9606 GN=UNC50 PE=1 SV=2) HSP 1 Score: 129.8 bits (325), Expect = 4.3e-29 Identity = 83/242 (34.30%), Postives = 130/242 (53.72%), Query Frame = 0
BLAST of MS012224 vs. ExPASy Swiss-Prot
Match: Q9CQ61 (Protein unc-50 homolog OS=Mus musculus OX=10090 GN=Unc50 PE=2 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.2e-28 Identity = 83/242 (34.30%), Postives = 129/242 (53.31%), Query Frame = 0
BLAST of MS012224 vs. ExPASy Swiss-Prot
Match: O55227 (Protein unc-50 homolog OS=Rattus norvegicus OX=10116 GN=Unc50 PE=1 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.2e-28 Identity = 83/242 (34.30%), Postives = 129/242 (53.31%), Query Frame = 0
BLAST of MS012224 vs. ExPASy TrEMBL
Match: A0A6J1D6A1 (protein unc-50 homolog OS=Momordica charantia OX=3673 GN=LOC111017322 PE=3 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 7.1e-112 Identity = 215/247 (87.04%), Postives = 217/247 (87.85%), Query Frame = 0
BLAST of MS012224 vs. ExPASy TrEMBL
Match: A0A0A0K2I1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071690 PE=3 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 2.3e-110 Identity = 211/247 (85.43%), Postives = 216/247 (87.45%), Query Frame = 0
BLAST of MS012224 vs. ExPASy TrEMBL
Match: A0A5D3C4E1 (Protein unc-50-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00950 PE=3 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 3.0e-110 Identity = 211/247 (85.43%), Postives = 216/247 (87.45%), Query Frame = 0
BLAST of MS012224 vs. ExPASy TrEMBL
Match: A0A1S3BZU9 (protein unc-50 homolog OS=Cucumis melo OX=3656 GN=LOC103495277 PE=3 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 3.0e-110 Identity = 211/247 (85.43%), Postives = 216/247 (87.45%), Query Frame = 0
BLAST of MS012224 vs. ExPASy TrEMBL
Match: A0A5A7SKS6 (Protein unc-50-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G00940 PE=3 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 1.1e-109 Identity = 212/247 (85.83%), Postives = 222/247 (89.88%), Query Frame = 0
BLAST of MS012224 vs. TAIR 10
Match: AT2G15240.1 (UNC-50 family protein ) HSP 1 Score: 366.3 bits (939), Expect = 1.9e-101 Identity = 182/247 (73.68%), Postives = 202/247 (81.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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