MS012112 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCCTTGTCGACTGGTTCTATGGCGTCTTGGCCTCCCTTGGTCTCTGGCAGAAAGAGGCCAAGATCCTCTTTCTTGGCCTCGATAATGCCGGGAAGACCACCCTGCTTCACATGTTGAAAGATGAGGTCTCTTCTCTCTCTCCTTCACTCTACCATCATTATTTTCGATTGTAATTTGACGCATGGAGCTTCCAATTGCCTTGAATTGCTTTGTTTCCCTTTTTTCTGAAATTTGTTGCTCGGCGGAGGTGCGCCCTGATGTTCCGAGAGATTTAAGAATTTTGTTTGGTTGTGGAATTTCTTAGAAGTTGTATGTTTCTGCTGGTAGGTGGAGGCAGAACAATTCGATTGCCCGATTACTAATTTGGATCTTGTTTATCGTTGGCGATTATCTGTTTAATTATTTATTGTTGATTTGGTCTGTTGGTAATGGCGCCGTTTCTTATTTGCTTCAGAGGTTAGTACAGCATCAGCCAACGCAGTATCCTACGTCGGAGGAGTTGAGCATCGGGAAGATAAAGTTCAAGGCGTTTGATTTAGGAGGCCATCAGATTGCTCGTAGAGTTTGGAAAGACTACTACGCTAAGGCAAGTTAATTCCGTATATTTTATCTTTCTCTTTGTTAATGGTTTATGTTTTGAAGGAAAATAAAATCATATTCATTTCAGTATCCATTTCCGTTTTCTTGTCTCTAAGATTTCTTTATACGATTTTCCCATGAATTAGATATAAAGTGAGACGAAAATTTGCTGACCCGGCTGGTAAAGACCATGGGGTCCTCTAGTATGAGTCGGTAGTGGATATTTTTGGAAGATATGCAGTATCTAGTTATGTTTATGGCATTATAGGCACAATTTGAGAATCCTTTTCTGTGTTGATCAAGTAAGAAAAAATCATGCATGGTAATGAGTTATTGTTTCATTTTTTTTTCTTTAAGTTCAAAGATGAAAACAAGAACATTGTTTGATAATTATTTTTGTTTCTCATTTGTCATTTCTTAAACAACATGAGTATCAAGAAAGATAAAAAATGTATTTATAATTTACTTTTAATTCTTAAGTTTTAGAATTTATGTGAACCTCGAAACAGGAAGCATGGAAGTATATTTTCCTATGTCCAAGATTTAAACATGAGGTTCTCGCAGAAGTTTTTTCACCTAGGAGTCTCCTGTCTTTGGACCATAGCCATACCAATTTGAACTCTTTCCAACTGTTTTGTACTTCATACTAAGATGCCTCTACTATATTTTTTATCTGCCATTTGCCCTTCAATGAAGAATGCAAGATTGTTAAGTAAACAATATAGTGTTATGTTAAATTTCAGTTGTATGAACTTTTATAAAGTAATAATTGGTAAGTTCAAAACAATCTAGTCTATACAGAAAAATTTAAACAAAACAATAATGATGGCAAACCGTAATAGCTAAACCAAGAATGACGAATCATTCCTGTAGGACCAAGCAGATTGAATTTCTTTTAGTGTTATACAGTTTCCGTTTTCAAGGTGGCAGATCAGTTAGAATAGAGGAGAGAAGATGGAGACGAACTTCTATAATTTTTGGGAATGGTCACACGGCTGAAATGGCTTAGGATAGCAACTGCAGAAGTGATTGGGACCCCTTGAAATCTAAAAAGTTTCAAGAAGACAAGATGGGGATGGAGATCAATCTGGTTTCAGAAGCTTTCTAATAAAAGAGGTTGGAGGTTAGAAATTTTGACTTTGTCAAATGAACATGAGAGGAGAAGTTTGATCATTCTGGATGGAAAAAACATGGAAGGTGAAAGTCTTTTTGAAATTAAAGGATGAGTTCCTATCTTTGTTTGAAGGTAAAAGAAAGGGGATTAAAAACAAAGAGATCAAATCATATGCTGATGTGATGGAAGAGAAGGGATAGAGTAAAGAGATTGTCTGGAGTAGGATGTTTGATAATGTGGTGACCTGGGAGAGAGCAATTATTCTTACCAAGTTATGTTTCCACGATAATTGGTGGGACATTTGGGAAGTGTTGAAGAAAATTATCGATGGGAGTTGAATTGTTTGCTAAATCCATACTGGCCAGGCTAGGCCTCACTTTGGTGTGCTAGTGTAGATGAAGCAAGAGCTTTGTGCAGCATCAAAGGGTGGTCAAGGGTGAGCAAGTTGTTTTTGTTAATTGAAAGTGGCGGAATGATGGTAAACATAGTAGGGAAAAGTTGTTTGTTCTTTCCTGGAACGTGGAAATGATGGGAAATAAACGTTTGGGTTCAATACTTGGGAGGCTTGCAATGAAGCTTGGGGGAACCATTTTGAATTCATTATTGCAGAAATTAAGGTGCTAGGTAATAGGTGATAGACTGATAGTAGTTGTGTTCTTAATGTTCCCCAGTGGTGCCTCTTTCGTCTAGGTTGCTGCTGGCAAGGAGGCTGCTGGAAGTTCACAATTGTTTTCTGAGGGAAGCTGCGGTCAGGTTGCATGATTCCAATGAGTGCCCTTGTCCGATTGATGCTGCAAGATTGGGATGGGCAAAAGATCTAGGCAAAATGGAACATTTAAAAAAAATTGATAATAGAAAGGAGCAAACCATGGTACAATAAAGCTACTGTTTCAAAAATAGCTTAGAGTACTTTTAATTAATTTGGTTTATTTCATTGATAGTTTTTACATTTTTTTTAAAATTTTGTTTGGCTATAAATAGCCATACTTGGATTTCTTTGGTCAAGCACGAGAAAGGAGAGACGTCAGACTAACGGAAAAGGGTGGTTGTGTCTTTATGAAGTTGGATTATAAAGGGTGTAAGGGATCATAGTAAAAAGACTATGGTTAAGGAGAAGGTAAAAAAGATTCATCCACAGGTTGCGTTTCTCTAGGAAACGCTAAAAAGAAGCGGGAAAATTGACAGAGGAATTGTGAAATCACTTTGACCTCAATGAATGTTGGGTGGTCAAAGGTACAGGCGTGCGGACGATTAGGAGGGATCTTAACCTTGTGGGTTCAAAAGAAAGTGGTGGTTTCAGTCCACTAATTTTTTAGAATTAGAAATAGGAACTTTTTTCTAATAAAATATGAGCTAGGGGATGGAGAGAACATGGATCTCGAACATTTATGGTCCGCTGAATAATAGTTGTAGAATGGAGCTCCAGAGAGAATTGGAGAATTTGAGTGGATAACACATCAAGGGTTCTGGTGCTAATCCACTAATTTTTAAAAATTAGAAATATTTACTTTTTCTTTTCTTATCAGCCGACTTTAAAGGTGCTCTCAGCATATACCACCATAAATCATGGATAAAGGTAAAAAAAAAAAAAGGAAAAGAAAAGGAGCATGCCCCACCATATGCACTCAAAGCTCATTATTTAGGCTGGATTACCTTTTTTGCCTTGATATGTATTAGCATCCATCTTATTTGGGACCTACAGAATTTTTTTTTGTAACCTAGCTGCTAGAATACCATGTCATTTGAACGTTGCATTGCAGGTCGATGCCGTGGTATACTTGGTGGATGCCTTCGATAAGGAGAGATTTGCAGAATCGAAAAAGGAACTCGACGCCCTCCTTTCTGACGAGTCACTTGCAAATGTCCCATTTCTTGTGTTGGGGAACAAGATCGACATACCCTATGCTGCCTCAGAAGATGAATTGCGATACCACCTCGGCCTGACCAACTTTACCACTGGAAAAGGAAAGGTAAACCTAGCAGACACGAACGTTCGCCCATTGGAGGTGTTCATGTGCAGCATCGTCCGCAAAATGGGGTATGGTGATGGCTTCAAATGGCTTTCTCAATATATCAAG ATGTTCCTTGTCGACTGGTTCTATGGCGTCTTGGCCTCCCTTGGTCTCTGGCAGAAAGAGGCCAAGATCCTCTTTCTTGGCCTCGATAATGCCGGGAAGACCACCCTGCTTCACATGTTGAAAGATGAGAGGTTAGTACAGCATCAGCCAACGCAGTATCCTACGTCGGAGGAGTTGAGCATCGGGAAGATAAAGTTCAAGGCGTTTGATTTAGGAGGCCATCAGATTGCTCGTAGAGTTTGGAAAGACTACTACGCTAAGGCAACTGCTAGAATACCATGTCATTTGAACGTTGCATTGCAGGTCGATGCCGTGGTATACTTGGTGGATGCCTTCGATAAGGAGAGATTTGCAGAATCGAAAAAGGAACTCGACGCCCTCCTTTCTGACGAGTCACTTGCAAATGTCCCATTTCTTGTGTTGGGGAACAAGATCGACATACCCTATGCTGCCTCAGAAGATGAATTGCGATACCACCTCGGCCTGACCAACTTTACCACTGGAAAAGGAAAGGTAAACCTAGCAGACACGAACGTTCGCCCATTGGAGGTGTTCATGTGCAGCATCGTCCGCAAAATGGGGTATGGTGATGGCTTCAAATGGCTTTCTCAATATATCAAG ATGTTCCTTGTCGACTGGTTCTATGGCGTCTTGGCCTCCCTTGGTCTCTGGCAGAAAGAGGCCAAGATCCTCTTTCTTGGCCTCGATAATGCCGGGAAGACCACCCTGCTTCACATGTTGAAAGATGAGAGGTTAGTACAGCATCAGCCAACGCAGTATCCTACGTCGGAGGAGTTGAGCATCGGGAAGATAAAGTTCAAGGCGTTTGATTTAGGAGGCCATCAGATTGCTCGTAGAGTTTGGAAAGACTACTACGCTAAGGCAACTGCTAGAATACCATGTCATTTGAACGTTGCATTGCAGGTCGATGCCGTGGTATACTTGGTGGATGCCTTCGATAAGGAGAGATTTGCAGAATCGAAAAAGGAACTCGACGCCCTCCTTTCTGACGAGTCACTTGCAAATGTCCCATTTCTTGTGTTGGGGAACAAGATCGACATACCCTATGCTGCCTCAGAAGATGAATTGCGATACCACCTCGGCCTGACCAACTTTACCACTGGAAAAGGAAAGGTAAACCTAGCAGACACGAACGTTCGCCCATTGGAGGTGTTCATGTGCAGCATCGTCCGCAAAATGGGGTATGGTGATGGCTTCAAATGGCTTTCTCAATATATCAAG MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKATARIPCHLNVALQVDAVVYLVDAFDKERFAESKKELDALLSDESLANVPFLVLGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLADTNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK Homology
BLAST of MS012112 vs. NCBI nr
Match: XP_022148935.1 (GTP-binding protein SAR1A-like [Momordica charantia]) HSP 1 Score: 387.9 bits (995), Expect = 5.5e-104 Identity = 193/207 (93.24%), Postives = 193/207 (93.24%), Query Frame = 0
BLAST of MS012112 vs. NCBI nr
Match: XP_008451486.1 (PREDICTED: GTP-binding protein SAR1A [Cucumis melo] >XP_038899671.1 GTP-binding protein SAR1A [Benincasa hispida]) HSP 1 Score: 386.7 bits (992), Expect = 1.2e-103 Identity = 192/207 (92.75%), Postives = 193/207 (93.24%), Query Frame = 0
BLAST of MS012112 vs. NCBI nr
Match: XP_004135993.1 (GTP-binding protein SAR1A [Cucumis sativus] >KGN45010.1 hypothetical protein Csa_016714 [Cucumis sativus]) HSP 1 Score: 385.6 bits (989), Expect = 2.7e-103 Identity = 191/207 (92.27%), Postives = 193/207 (93.24%), Query Frame = 0
BLAST of MS012112 vs. NCBI nr
Match: XP_022960524.1 (GTP-binding protein SAR1A [Cucurbita moschata] >XP_023004665.1 GTP-binding protein SAR1A [Cucurbita maxima] >KAG6593235.1 GTP-binding protein SAR1A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 384.4 bits (986), Expect = 6.1e-103 Identity = 191/207 (92.27%), Postives = 192/207 (92.75%), Query Frame = 0
BLAST of MS012112 vs. NCBI nr
Match: XP_021665045.1 (GTP-binding protein SAR1A-like isoform X1 [Hevea brasiliensis]) HSP 1 Score: 384.4 bits (986), Expect = 6.1e-103 Identity = 186/207 (89.86%), Postives = 197/207 (95.17%), Query Frame = 0
BLAST of MS012112 vs. ExPASy Swiss-Prot
Match: O04834 (GTP-binding protein SAR1A OS=Arabidopsis thaliana OX=3702 GN=SAR1A PE=2 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 1.1e-102 Identity = 182/207 (87.92%), Postives = 192/207 (92.75%), Query Frame = 0
BLAST of MS012112 vs. ExPASy Swiss-Prot
Match: O04266 (GTP-binding protein SAR1A OS=Brassica campestris OX=3711 GN=SAR1A PE=2 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 2.0e-101 Identity = 181/207 (87.44%), Postives = 190/207 (91.79%), Query Frame = 0
BLAST of MS012112 vs. ExPASy Swiss-Prot
Match: Q01474 (GTP-binding protein SAR1B OS=Arabidopsis thaliana OX=3702 GN=SAR1B PE=1 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 3.0e-100 Identity = 179/206 (86.89%), Postives = 187/206 (90.78%), Query Frame = 0
BLAST of MS012112 vs. ExPASy Swiss-Prot
Match: P52884 (GTP-binding protein SAR2 OS=Solanum lycopersicum OX=4081 GN=SAR2 PE=2 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 2.8e-98 Identity = 175/207 (84.54%), Postives = 184/207 (88.89%), Query Frame = 0
BLAST of MS012112 vs. ExPASy Swiss-Prot
Match: O04267 (GTP-binding protein SAR1B OS=Brassica campestris OX=3711 GN=SAR1B PE=2 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 1.8e-97 Identity = 177/208 (85.10%), Postives = 186/208 (89.42%), Query Frame = 0
BLAST of MS012112 vs. ExPASy TrEMBL
Match: A0A6J1D4B9 (GTP-binding protein SAR1A-like OS=Momordica charantia OX=3673 GN=LOC111017479 PE=3 SV=1) HSP 1 Score: 387.9 bits (995), Expect = 2.7e-104 Identity = 193/207 (93.24%), Postives = 193/207 (93.24%), Query Frame = 0
BLAST of MS012112 vs. ExPASy TrEMBL
Match: A0A1S3BRM4 (GTP-binding protein SAR1A OS=Cucumis melo OX=3656 GN=LOC103492761 PE=3 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 6.0e-104 Identity = 192/207 (92.75%), Postives = 193/207 (93.24%), Query Frame = 0
BLAST of MS012112 vs. ExPASy TrEMBL
Match: A0A0A0K5S9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G407630 PE=3 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103 Identity = 191/207 (92.27%), Postives = 193/207 (93.24%), Query Frame = 0
BLAST of MS012112 vs. ExPASy TrEMBL
Match: A0A6J1KV84 (GTP-binding protein SAR1A OS=Cucurbita maxima OX=3661 GN=LOC111497891 PE=3 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 3.0e-103 Identity = 191/207 (92.27%), Postives = 192/207 (92.75%), Query Frame = 0
BLAST of MS012112 vs. ExPASy TrEMBL
Match: A0A6J1HB96 (GTP-binding protein SAR1A OS=Cucurbita moschata OX=3662 GN=LOC111461237 PE=3 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 3.0e-103 Identity = 191/207 (92.27%), Postives = 192/207 (92.75%), Query Frame = 0
BLAST of MS012112 vs. TAIR 10
Match: AT4G02080.1 (secretion-associated RAS super family 2 ) HSP 1 Score: 374.0 bits (959), Expect = 7.7e-104 Identity = 182/207 (87.92%), Postives = 192/207 (92.75%), Query Frame = 0
BLAST of MS012112 vs. TAIR 10
Match: AT3G62560.1 (Ras-related small GTP-binding family protein ) HSP 1 Score: 373.6 bits (958), Expect = 1.0e-103 Identity = 184/206 (89.32%), Postives = 191/206 (92.72%), Query Frame = 0
BLAST of MS012112 vs. TAIR 10
Match: AT1G56330.1 (secretion-associated RAS 1B ) HSP 1 Score: 365.9 bits (938), Expect = 2.1e-101 Identity = 179/206 (86.89%), Postives = 187/206 (90.78%), Query Frame = 0
BLAST of MS012112 vs. TAIR 10
Match: AT1G09180.1 (secretion-associated RAS super family 1 ) HSP 1 Score: 347.1 bits (889), Expect = 1.0e-95 Identity = 171/207 (82.61%), Postives = 184/207 (88.89%), Query Frame = 0
BLAST of MS012112 vs. TAIR 10
Match: AT1G02620.1 (Ras-related small GTP-binding family protein ) HSP 1 Score: 206.1 bits (523), Expect = 2.8e-53 Identity = 97/107 (90.65%), Postives = 105/107 (98.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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