MS011942 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAGGATAGGCCTTATGTGCAAACCAGGGGAGCCATGGCCAAAACAAGAACGAAGCACAGTTATGCTCTTTCGTAGCTAAGACTGAGAAAGAGGAGCTTGAAGAACTCTGTAATGGCGTCTCTAACTCTTTCCCTCTGCGCAACTTTCGCCACTCATTGCCGAATCTCCAGCAAGCAGAATCTACCTTCATCAACCCCAATTTTCCCCTCCAATTCCCACCACGATTCGTTCAATCTCGCCCTTTCTTGTTCATCATCTTCCCATCCTTCTTCCCGCGCACCATTGCCCTTCGTCCTCAGGTCTTCGGAGTCTGAAGCCGCGGTTATCGAGTCTGAGCCAGCCGCTTCCCAAATCGTTGAAGTCCCCCCGGAACAGGCCCCTAAGCGCGAGGAAATCTTTGCAGTAGTTATGGTTAGTGTTCAATTTCACTAACTAGTAGCGTTTATGATTTCGGTTCCTCATTTCCCTTCAAGTTAAAAGAAACGTATGGTGGGATTTGGATTTGGATTTGCCTAAAATGGTGGATTAATCTGTTGCTATTCGTACGGGATTTTTGTTGTTCATTCTGTAGATTGGATCCCGTCAATATATAGTCTTTCCAGGGCGTTATATACATACCCAGAGGCTGAAAGGGGCTAACGTCAATGATAAGGTGGGCTTCCTTAATATCCTTCTCGTTACATGTTGGTTATATGAGTATCTTAGTGTGATTGTTGTCTTAAAGAGTTTAGAGTGTTATTGCATTGTTTGCATTTTAAGGTAACATTATCGTGTTGAGCAGTCATTTGCATTGTTTAGTTTACCTAAGGAACTGATTTTAGAAATTGGTTGGGAGATTTGAGGTGCTATTTGGGTGAAAGCCTCATCTCATATTCTGATGTATTTCTCCTGTCAAAGTGACAGAGTTGCCATTTTGGAACAATTCTATGGTATCTTTGTTCATGTCTTTGTACTTCAGCGAAGACCTACTTTATACTAATTACTTGTACCATTATGTTCTTATAAAAAAAAATTACTTGTACCATTATGGACATGAGGACATGTCACCATAACAAAGGGTCTGTCACTGTTGGATTACTTTTTGTCCTCCATGGTTCTAAGCTTGATTTTGTTAGTGAAAATTGGTTTTAGCGTGTGTAAAAATGTAATATGGAGCTTGTATTAGCGTGCTTGAATTAGATTGTTTGAGCAAGAAGCGTCTTGTGAACCATTTGACTTCCATGAGAGGCTTGACACATGGAAACCTCGATTTGGCGAACTGCATAGAAGAACCATATGACTTTTAATTTTAGGTAAACTTGAGAATTTGAAGTAGTGCTGCTTCATATTATTACTTGATTGGTGTTGCTGCTTGGCATCAAAGCATGCTATCTGTTGGAGAAAGGCGAGATGAGAAGAGAATCAATTAGAGGGACATCCTGTGAGTGAGCAATAGAGGCTAAGAGCGAGAGAATGTTGTTAGGTTTTAAAGAAAGGTCAAGATAGTCTAGAAAAGTTGTTCTCTTGATGTCTTTTGGGGAGGGTTTCCTCAACCCTCTGCCTCTAGGTTGTTTTGACCATCTTTTTGGGTCCTTTTCTTATGCATTTCTATGTTTCCTATAAAAAAAAAAGTTGTTCTCTTGGCCTAGGGGCAGTGTCTTGGGCCAGAGACAGCTTGGCAGGAGAGCTTCTATGTAGACTAATTTTTTCCTTTTTAGAAAGATATACATATACTCAGCTCTGATTCTGTAATAGATTTCATAGAATGATTGGAGTATTTTTGTCAGATTTCTTCGGATGACCTCTTTATGATCAATTGATCATGAATCTCGAGACATATCTATTATTCTTCTCTTGTGATGAAGAGTTTGTCCTTTCCCTAACTTTAGCAATTTTCACATGTTCATTCATGGATGGAGTCTCAAGCCTTCTGACCTTTCCTTGTAGTTGTATGTTTCTTCTCGCTTATTTGTTGATCTTCAGCTATCCTAGTTCCCATTTCTTCGCCTTGCTTTAGAAGGCTAAAATCTCAGAGAAGTTTAGGTTTTTCTCCTAGTTGATCATTTTGGAAGGATAAACACCATGGACTTTGTCCAAAGATCTAGTTGTGTCTGTTATACAATAAGGTAGCAGAAGCTTTGGATCATGTATTATGAAGGTGTCACTTTATTACGAAAGTTTTTAATAGTTTTCTTGAAACCTTTTGTGTTTGTTTGGCTTCTTCTAGAGGTTGTTGGAGCGTCACAAAAGGAGGTGCTCATTAATCCTCCTTTGCATAATTGTGTGGGGTTCTTTGGAATGTCGGAGGAGGTTTGGATTGTGACTGACTTCAATGTTTTTCTTTTGGTATTTTCTACGTTTTCTTTTTCTTGAAAAAGGACGAAGTCAATACCATGGATCGTATTCAGAGGATGTCTTCCTTTTGCCTGGGCCTGCAGTGGTGTGTTCTGTGTAGAAGTGCCTTGGAAGATTGTTGTGGACCTGTCAGTTCGCGCAGGATTTATGGCTTCGATTCTTTAGACGTTTTGGGATTGTTTGAGTCTATTGTAGGGTGATGATGGAGGAAGCGTTGTTATTCCCTCCTTTTTGTGACAGAGGTCGTTTTCTTTGGCAAGGGTGTTTTCTGGCTACGTTATGGGGTATCTGGCTGGAGAGGAACAATAGGCTGTTTAGGAGGGTGGAGAAAACTGTGAATTATGTTTGGGACCTCATTAGGTTTAATACTTCTTTATGCGGTTCGGTCACTAAGGCCTTTGTAATTATCAGTTAGGTCTCATTCTTTTGGATTGGAGCCCGTTTCTTTAGGAGTTTCCTTTTGCAGGGCTGTTTTTGTATGCCCTCCTTGTTTTTGTATCTATTTTTCATCTCTCCATGTAAGTGCAATTTCTTATCCAAAAAAAAAAAAAAAAAGAAGAAGAAGAAAAAGAATGAATACAAAAAGAGGACAAGATATCCTTAAAAAGTCAATGAGTTTACATGAAAGCACTGCAATGGGCAGAAATAACATTGAATGGGTAATAATAAAAGAATTACAAAGAGAGCTCCACTTTGGAACTGAAAAAAAGTATCCTATCCTAAAAAGCATCACTAGAAATTTCAACCTGCTGAAAAGTTATATTTCTATTTAACTACACCTCCAAGAGACTTCACTGCATTGTTATAAGAATTTTTTTCCCTTTTAATGAAGTCCTACAAAGCGCCGAAACTATGAGATGTAAAAATGCATCGTTAGGGGAGCGTTCCGCCTTAGAGAGAGCTTTGGAGGTTTCTTTGATGTTCTTTGGAAAGCACCACTGGATATTGAGGTTAGGAATCAGATCCACTATAGAGGAAGAGATAGTTAATAGTTTTAGTTTTCTTTTTGCTTAAAATGCACCGATGGGGAAATAAGTAAATAGTTTAAATGGGACCTTTGTACTTCGTTATTAGTATGGACGATGACCGAACGAAGAACCTGATCTTCTAAGGATTTTTATTGCTCCCAATATCTCTTTGCAAAACTTCGTGGGAAATATCTATTATTTTTCATCACGAAGTTCAATGCCAAATTTCTAGAAAAAAGTCCTGAAGTTCTAGCTTCCAGCTTCCATCTTCTTCACTTTTAATGTTGAACATTTTCTAAGAGGCTATTGAGAAGTAATCCATTCTTCTATTTGGCTTCTAGAAGATTTGTTCTGAATTTGATTTCTTGGTCCCACATATCCTTGACTTTTATATGTTTTGATTTTCAACAAATCCATGAAGTCCTGGAAATAAATTTTGGAAATTATGGTTGGCAGCTCAACAGCCCCCACTAGATCATATACCATTCTCGTCCTCACTAATAGGTCCTTTTCTCCCCATCATTTGACTTATAGCCCTCCATATTTTCCTCTTTACTTCAGTCTTATTTCCATGTTCCTCAATGCCTATGGGAGAGAGAGAGGAAGGTTGAATCGAACAAAAGAGAGCAATAACTTTTTTATTTTGTGTAGAAATTACCTTTAGCAATGCAGCACAAGTATGGTCTTCGGATGGTAACTATTGACCAAGATTTGTGCTGAAGCACGAATATTTAGCTCATGATATTGACTTAGGTTATAGTTTTTACCTAAAAAGCACAGACACTTTGAGTAACATGTCTGTCTGACGTTTATTGGATACGTATTAGACACTTGTTACTTCAATAGATGTGCATCACAAACTGTACTCTACAAATATATATAGATCCGACAAACACTTGCTAAGCATAATAAAACGACATAAATAATAGTAGTATAAGCCGAACTAATAAAATTTGAGAGAACACATCATACATAACTTTATTGACTTTGAATTCCATTTGGTATAAAAATTATATATATTTTAATAAACATGTCCTTGTTGTGTCATTGTCCTAAATTTTTAGAAAATGATGTGTCATATCTGGGTCTTGTGTCCGATCTATGTTTCTTAGGTTTTTACGTTCCACATACGATGAATGCCATCATATTTGACAAACTAACAAATATCAGTTTTACTATGTGATTACAGACGGATCTTCTTTCATGTATAAATGTGAACCAAACCCCTCTATCATCAATGCATTATGAGATACTGTGACCATCTTAAAGTTGTTTAAATTTGTGATTGTGCAGATAACTCTGAATAAGGTTTTGCTTGTGGGAACAAAAACTCACACTTACATTGGAAAGCCAGTGGTGACAAATGCTGCTGTTCATGCTATAGTGGAGGAACAGGTAGTGCATCAATTTTTGAGCAATGCTTCTTTTCTTAGATTTTCTTATTGTTTATGTTTCGCTCTTCCTAATTTCTCACTTGATTCTTTTATTTAGGGATTAGATGACAAAGTAATTGTCTTCAAGTACAAGAAAAAGAAAAACTACCGAAGAAACATCGGTCATCGTCAGGTATTTCTCGGTCCTCGCCTCTCTCTCTGTCGTGTCATTCAATTTCTTCCATAGTTTGTTTCTGCACTGATTTAGAGATGATAGGAATGATTGATGTGCATGAGTCTAGAAAATGCTCTGAATACGGATTTCGTCTTTGTAATTTCTGAATCTGTTTTAACCCGAATGGTGCAGCCGAATACGCGAATAAGGATAACGGAAATCTCTGGATATCAAGACTATCCAGCAGCCACACTTGAGTCG ATGGATAGGATAGGCCTTATGTGCAAACCAGGGGAGCCATGGCCAAAACAAGAACGAAGCACAGTTATGCTCTTTCGTAGCCTGAGAAAGAGGAGCTTGAAGAACTCTGTAATGGCGTCTCTAACTCTTTCCCTCTGCGCAACTTTCGCCACTCATTGCCGAATCTCCAGCAAGCAGAATCTACCTTCATCAACCCCAATTTTCCCCTCCAATTCCCACCACGATTCGTTCAATCTCGCCCTTTCTTGTTCATCATCTTCCCATCCTTCTTCCCGCGCACCATTGCCCTTCGTCCTCAGGTCTTCGGAGTCTGAAGCCGCGGTTATCGAGTCTGAGCCAGCCGCTTCCCAAATCGTTGAAGTCCCCCCGGAACAGGCCCCTAAGCGCGAGGAAATCTTTGCAGTAGTTATGATTGGATCCCGTCAATATATAGTCTTTCCAGGGCGTTATATACATACCCAGAGGCTGAAAGGGGCTAACGTCAATGATAAGATAACTCTGAATAAGGTTTTGCTTGTGGGAACAAAAACTCACACTTACATTGGAAAGCCAGTGGTGACAAATGCTGCTGTTCATGCTATAGTGGAGGAACAGGGATTAGATGACAAAGTAATTGTCTTCAAGTACAAGAAAAAGAAAAACTACCGAAGAAACATCGGTCATCGTCAGCCGAATACGCGAATAAGGATAACGGAAATCTCTGGATATCAAGACTATCCAGCAGCCACACTTGAGTCG ATGGATAGGATAGGCCTTATGTGCAAACCAGGGGAGCCATGGCCAAAACAAGAACGAAGCACAGTTATGCTCTTTCGTAGCCTGAGAAAGAGGAGCTTGAAGAACTCTGTAATGGCGTCTCTAACTCTTTCCCTCTGCGCAACTTTCGCCACTCATTGCCGAATCTCCAGCAAGCAGAATCTACCTTCATCAACCCCAATTTTCCCCTCCAATTCCCACCACGATTCGTTCAATCTCGCCCTTTCTTGTTCATCATCTTCCCATCCTTCTTCCCGCGCACCATTGCCCTTCGTCCTCAGGTCTTCGGAGTCTGAAGCCGCGGTTATCGAGTCTGAGCCAGCCGCTTCCCAAATCGTTGAAGTCCCCCCGGAACAGGCCCCTAAGCGCGAGGAAATCTTTGCAGTAGTTATGATTGGATCCCGTCAATATATAGTCTTTCCAGGGCGTTATATACATACCCAGAGGCTGAAAGGGGCTAACGTCAATGATAAGATAACTCTGAATAAGGTTTTGCTTGTGGGAACAAAAACTCACACTTACATTGGAAAGCCAGTGGTGACAAATGCTGCTGTTCATGCTATAGTGGAGGAACAGGGATTAGATGACAAAGTAATTGTCTTCAAGTACAAGAAAAAGAAAAACTACCGAAGAAACATCGGTCATCGTCAGCCGAATACGCGAATAAGGATAACGGAAATCTCTGGATATCAAGACTATCCAGCAGCCACACTTGAGTCG MDRIGLMCKPGEPWPKQERSTVMLFRSLRKRSLKNSVMASLTLSLCATFATHCRISSKQNLPSSTPIFPSNSHHDSFNLALSCSSSSHPSSRAPLPFVLRSSESEAAVIESEPAASQIVEVPPEQAPKREEIFAVVMIGSRQYIVFPGRYIHTQRLKGANVNDKITLNKVLLVGTKTHTYIGKPVVTNAAVHAIVEEQGLDDKVIVFKYKKKKNYRRNIGHRQPNTRIRITEISGYQDYPAATLES Homology
BLAST of MS011942 vs. NCBI nr
Match: XP_022143625.1 (50S ribosomal protein L21, chloroplastic [Momordica charantia]) HSP 1 Score: 402.5 bits (1033), Expect = 2.6e-108 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of MS011942 vs. NCBI nr
Match: XP_038899803.1 (50S ribosomal protein L21, chloroplastic [Benincasa hispida]) HSP 1 Score: 350.5 bits (898), Expect = 1.2e-92 Identity = 185/212 (87.26%), Postives = 193/212 (91.04%), Query Frame = 0
BLAST of MS011942 vs. NCBI nr
Match: XP_022981606.1 (50S ribosomal protein L21, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 345.5 bits (885), Expect = 3.7e-91 Identity = 183/216 (84.72%), Postives = 195/216 (90.28%), Query Frame = 0
BLAST of MS011942 vs. NCBI nr
Match: XP_022926213.1 (50S ribosomal protein L21, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 345.1 bits (884), Expect = 4.9e-91 Identity = 183/216 (84.72%), Postives = 195/216 (90.28%), Query Frame = 0
BLAST of MS011942 vs. NCBI nr
Match: KAG6607629.1 (50S ribosomal protein L21, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037229.1 50S ribosomal protein L21, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 342.8 bits (878), Expect = 2.4e-90 Identity = 181/216 (83.80%), Postives = 194/216 (89.81%), Query Frame = 0
BLAST of MS011942 vs. ExPASy Swiss-Prot
Match: P51412 (50S ribosomal protein L21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL21 PE=2 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.5e-55 Identity = 127/214 (59.35%), Postives = 157/214 (73.36%), Query Frame = 0
BLAST of MS011942 vs. ExPASy Swiss-Prot
Match: P24613 (50S ribosomal protein L21, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL21 PE=1 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 5.1e-51 Identity = 100/120 (83.33%), Postives = 110/120 (91.67%), Query Frame = 0
BLAST of MS011942 vs. ExPASy Swiss-Prot
Match: Q8L9A0 (50S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL21M PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 4.4e-26 Identity = 56/108 (51.85%), Postives = 81/108 (75.00%), Query Frame = 0
BLAST of MS011942 vs. ExPASy Swiss-Prot
Match: B8E0B4 (50S ribosomal protein L21 OS=Dictyoglomus turgidum (strain DSM 6724 / Z-1310) OX=515635 GN=rplU PE=3 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.3e-17 Identity = 51/102 (50.00%), Postives = 67/102 (65.69%), Query Frame = 0
BLAST of MS011942 vs. ExPASy Swiss-Prot
Match: A0LPF7 (50S ribosomal protein L21 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) OX=335543 GN=rplU PE=3 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 4.9e-17 Identity = 44/102 (43.14%), Postives = 68/102 (66.67%), Query Frame = 0
BLAST of MS011942 vs. ExPASy TrEMBL
Match: A0A6J1CPA7 (50S ribosomal protein L21, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013483 PE=3 SV=1) HSP 1 Score: 402.5 bits (1033), Expect = 1.3e-108 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of MS011942 vs. ExPASy TrEMBL
Match: A0A6J1IX10 (50S ribosomal protein L21, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111480675 PE=3 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 1.8e-91 Identity = 183/216 (84.72%), Postives = 195/216 (90.28%), Query Frame = 0
BLAST of MS011942 vs. ExPASy TrEMBL
Match: A0A6J1EHE5 (50S ribosomal protein L21, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111433392 PE=3 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 2.4e-91 Identity = 183/216 (84.72%), Postives = 195/216 (90.28%), Query Frame = 0
BLAST of MS011942 vs. ExPASy TrEMBL
Match: A0A6J1F5X0 (50S ribosomal protein L21, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111442642 PE=3 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 2.8e-84 Identity = 174/209 (83.25%), Postives = 182/209 (87.08%), Query Frame = 0
BLAST of MS011942 vs. ExPASy TrEMBL
Match: A0A6J1IIA4 (50S ribosomal protein L21, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111477160 PE=3 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 1.5e-82 Identity = 172/209 (82.30%), Postives = 178/209 (85.17%), Query Frame = 0
BLAST of MS011942 vs. TAIR 10
Match: AT1G35680.1 (Ribosomal protein L21 ) HSP 1 Score: 217.6 bits (553), Expect = 1.1e-56 Identity = 127/214 (59.35%), Postives = 157/214 (73.36%), Query Frame = 0
BLAST of MS011942 vs. TAIR 10
Match: AT4G30930.1 (Ribosomal protein L21 ) HSP 1 Score: 119.8 bits (299), Expect = 3.1e-27 Identity = 56/108 (51.85%), Postives = 81/108 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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