MS011877 (gene) Bitter gourd (TR) v1

Overview
NameMS011877
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCbl-interacting serinethreonine-protein kinase 9
Locationscaffold1150: 170640 .. 170894 (-)
RNA-Seq ExpressionMS011877
SyntenyMS011877
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGAAGGCAATTTCAAAGTGTCTCCCCAAATTACTGAACTTCATTAAATTTTCTTTTAGTGGTGGTTCTAAGGTCTATTTTTGGGAAGAGTTTTGGACTGGGGATGGTCCTCTTTATTTATTATTCCTTCATTTGTATGTTTTATCTTTGCATAAAATAGTTTCATCGCCTATTTTCTTTCTGTGTTTAGGGGATTGCTTTTCATTTGACTTCCACCTGAGAAGTGCTTTGTCAGATAGGGTAGGCCAGGATATG

mRNA sequence

TGGAAGGCAATTTCAAAGTGTCTCCCCAAATTACTGAACTTCATTAAATTTTCTTTTAGTGGTGGTTCTAAGGTCTATTTTTGGGAAGAGTTTTGGACTGGGGATGGTCCTCTTTATTTATTATTCCTTCATTTGTATGTTTTATCTTTGCATAAAATAGTTTCATCGCCTATTTTCTTTCTGTGTTTAGGGGATTGCTTTTCATTTGACTTCCACCTGAGAAGTGCTTTGTCAGATAGGGTAGGCCAGGATATG

Coding sequence (CDS)

TGGAAGGCAATTTCAAAGTGTCTCCCCAAATTACTGAACTTCATTAAATTTTCTTTTAGTGGTGGTTCTAAGGTCTATTTTTGGGAAGAGTTTTGGACTGGGGATGGTCCTCTTTATTTATTATTCCTTCATTTGTATGTTTTATCTTTGCATAAAATAGTTTCATCGCCTATTTTCTTTCTGTGTTTAGGGGATTGCTTTTCATTTGACTTCCACCTGAGAAGTGCTTTGTCAGATAGGGTAGGCCAGGATATG

Protein sequence

WKAISKCLPKLLNFIKFSFSGGSKVYFWEEFWTGDGPLYLLFLHLYVLSLHKIVSSPIFFLCLGDCFSFDFHLRSALSDRVGQDM
Homology
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BLAST of MS011877 vs. ExPASy TrEMBL
Match: A0A1J6IKP3 (Cbl-interacting serinethreonine-protein kinase 9 (Fragment) OS=Nicotiana attenuata OX=49451 GN=CIPK9 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.9e-04
Identity = 21/49 (42.86%), Postives = 29/49 (59.18%), Query Frame = 0 

Query: 1   WKAISKCLPKLLNFIKFSFSGGSKVYFWEEFWTGDGPLYLLFLHLYVLS 50
           WK+I  C PK++N  KF    G K+  W++ W G GPL  LF  +Y L+
Sbjct: 290 WKSIRNCWPKVINKAKFKVENGMKISLWDDIWLGQGPLKQLFPDIYTLN 338

The following BLAST results are available for this feature:
BLAST of MS011877 vs.
Match NameE-valueIdentityDescription
BLAST of MS011877 vs.
Match NameE-valueIdentityDescription
BLAST of MS011877 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1J6IKP34.9e-0442.86Cbl-interacting serinethreonine-protein kinase 9 (Fragment) OS=Nicotiana attenua... [more]
BLAST of MS011877 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS011877.1MS011877.1mRNA