MS011857 (gene) Bitter gourd (TR) v1

Overview
NameMS011857
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionreceptor-like protein 12
Locationscaffold1150: 20073 .. 20731 (+)
RNA-Seq ExpressionMS011857
SyntenyMS011857
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AATGGGAGCAAGTTAATTGAAATTTTGAATCTTGTTTCAAGTAATTTTTCAGGAGGGATTCCGGACTCCATTGGTTATAATGTCAAATCCTTGAAATCTCTAGATCTTCATTCATGCAAGTTCAACAGAGAAATTCCAGAGAAAATAAGAAATATTACACTGCTCAATACCATTGATCTCTAAAGTTCAATGGTCAGCTGCCCAATACATGGAATAACCTTCAAAAGTTAACTAATTTCCAAATCCACATGAATTCTTTCATGGATCAACTACCCGATTTTCTTTTCAACCTCACCCAACCCTCCAGCTTGACTACATCTAATTTGTTTTCGAGTCTTTTACCCATGAATGTTTCTGCAGATAGGCTTTCAAATCTTATTCATTTGAACTTTGGAACGTAACTCACTCATTGGTTTCGTACTCTCTTGGCTATTTTCATTACCTCGCTTAATTTTTTTGGATCTCTCTAATAACTATTTCACTCGTGTTATAAAAGATTTTAATCCAACTCACTAGAATTTCTTAATTTAAGTGAAAAAGTTGCAAGGTTTAAAACCTTTGAGTCTATTTATAGACAAGTGAATCTTACATCTTTGACATTGGGGTTGAATAATTTTAGTAAGGTTGTTCTGAATTTAGACATGTTGAAAATTGAGAGT

mRNA sequence

AATGGGAGCAAGTTAATTGAAATTTTGAATCTTGTTTCAAGTAATTTTTCAGGAGGGATTCCGGACTCCATTGGTTATAATGTCAAATCCTTGAAATCTCTAGATCTTCATTCATGCAAGTTCAACAGAGAAATTCCAGAGAAAATAAGAAATATTACACTGCTCAATACCATTGATCTCAAGTTCAATGGTCAGCTGCCCAATACATGGAATAACCTTCAAAAGTTAACTAATTTCCAAATCCACATGAATTCTTTCATGGATCAACTACCCGATTTTCTTTTCAACCTCACCCAACCCTCCAGCTTGACTACATCTAATTTGTTTTCGAGTCTTTTACCCATGAATGTTTCTGCAGATAGGCTTTCAAATCTTATTCATTTGAACGAACGTAACTCACTCATTGGTTTCGTACTCTCTTGGCTATTTTCATTACCTCGCTTAATTTTTTTGGATCTCTCTAATAACTATTTCACTCGTGTTATAAAAGATTTTTCCAACTCACTAGAATTTCTTAATTTAAGTGAAAAAGTTGCAAGGTTTAAAACCTTTGAGTCTATTTATAGACAAGTGAATCTTACATCTTTGACATTGGGGTTGAATAATTTTAGTAAGGTTGTTCTGAATTTAGACATGTTGAAAATTGAGAGT

Coding sequence (CDS)

AATGGGAGCAAGTTAATTGAAATTTTGAATCTTGTTTCAAGTAATTTTTCAGGAGGGATTCCGGACTCCATTGGTTATAATGTCAAATCCTTGAAATCTCTAGATCTTCATTCATGCAAGTTCAACAGAGAAATTCCAGAGAAAATAAGAAATATTACACTGCTCAATACCATTGATCTCAAGTTCAATGGTCAGCTGCCCAATACATGGAATAACCTTCAAAAGTTAACTAATTTCCAAATCCACATGAATTCTTTCATGGATCAACTACCCGATTTTCTTTTCAACCTCACCCAACCCTCCAGCTTGACTACATCTAATTTGTTTTCGAGTCTTTTACCCATGAATGTTTCTGCAGATAGGCTTTCAAATCTTATTCATTTGAACGAACGTAACTCACTCATTGGTTTCGTACTCTCTTGGCTATTTTCATTACCTCGCTTAATTTTTTTGGATCTCTCTAATAACTATTTCACTCGTGTTATAAAAGATTTTTCCAACTCACTAGAATTTCTTAATTTAAGTGAAAAAGTTGCAAGGTTTAAAACCTTTGAGTCTATTTATAGACAAGTGAATCTTACATCTTTGACATTGGGGTTGAATAATTTTAGTAAGGTTGTTCTGAATTTAGACATGTTGAAAATTGAGAGT

Protein sequence

NGSKLIEILNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDLKFNGQLPNTWNNLQKLTNFQIHMNSFMDQLPDFLFNLTQPSSLTTSNLFSSLLPMNVSADRLSNLIHLNERNSLIGFVLSWLFSLPRLIFLDLSNNYFTRVIKDFSNSLEFLNLSEKVARFKTFESIYRQVNLTSLTLGLNNFSKVVLNLDMLKIES
Homology
BLAST of MS011857 vs. NCBI nr
Match: XP_022145234.1 (receptor-like protein 12 [Momordica charantia])

HSP 1 Score: 258.5 bits (659), Expect = 5.3e-65
Identity = 158/243 (65.02%), Postives = 176/243 (72.43%), Query Frame = 0

Query: 1   NGSKLIEILNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDL 60
           N SK +EIL+LVS+NFSG IP+SIG N KSLKS++  SCKF  EIP  I N+T LNTIDL
Sbjct: 255 NWSKSLEILSLVSTNFSGEIPNSIG-NAKSLKSINFSSCKFIGEIPNSIGNLTQLNTIDL 314

Query: 61  ---------------------------KFNGQLPNTWNNLQKLTNFQIHMNSFMDQLPDF 120
                                      KFNGQL N+WNNLQKLTNF+IHMNSFM QLPD 
Sbjct: 315 FANKLTGGIPESIGNLKQLNTIDLSVNKFNGQLSNSWNNLQKLTNFKIHMNSFMGQLPDS 374

Query: 121 LFNLTQPSSLTTS-NLFSSLLPMNVSADRLSNLIHLN-ERNSLIGFVLSWLFSLPRLIFL 180
           LFNLTQ SSLTTS NLFS  LP NVSADRLSNL+HLN E NSLIG + SWLFSLP L FL
Sbjct: 375 LFNLTQLSSLTTSYNLFSGPLPTNVSADRLSNLVHLNLESNSLIGVIPSWLFSLPHLNFL 434

Query: 181 DLSNNYFTRVIKDF-SNSLEFLNLSEKVARFKTFESIYRQVNLTSLTLGLNNFSKVVLNL 214
           DLS+N+FT  +KDF S+SLEFL+LS+   +   FESIYRQVNLTSL LG NNFS  VLNL
Sbjct: 435 DLSDNHFTGFVKDFRSHSLEFLDLSKNKLQGGIFESIYRQVNLTSLALGSNNFSG-VLNL 494

BLAST of MS011857 vs. NCBI nr
Match: KAG6575370.1 (Receptor-like protein 34, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 224.6 bits (571), Expect = 8.5e-55
Identity = 135/219 (61.64%), Postives = 163/219 (74.43%), Query Frame = 0

Query: 1   NGSKLIEILNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDL 60
           N S+ +EIL+L S+NFSG IP SIG N KSL SLDL    F   +P+ I N+T L  IDL
Sbjct: 260 NLSESLEILSLSSTNFSGEIPYSIG-NAKSLTSLDLSFSNFTGGLPKSIGNLTQLTNIDL 319

Query: 61  ---KFNGQLPNTWNNLQKLTNFQIHMNSFMDQLPDFLFNLTQPSSLT-TSNLFSSLLPMN 120
              KFNGQLPNTWN LQKLTNF+IHMNSFM  LP+ LFNLT  S++T +SNLFS  LP N
Sbjct: 320 SVNKFNGQLPNTWNKLQKLTNFRIHMNSFMGHLPNSLFNLTHLSNMTFSSNLFSGHLPTN 379

Query: 121 VSADRLSNLIHLN-ERNSLIGFVLSWLFSLPRLIFLDLSNNYFTRVIKDF-SNSLEFLNL 180
           V +D LSNLIHLN ERNSL G + SWL++LPRL +LDLS+N+F+ +++DF SNSLEFL+L
Sbjct: 380 VDSDALSNLIHLNLERNSLTGAIPSWLYALPRLNYLDLSHNHFSSLMRDFRSNSLEFLDL 439

Query: 181 SEKVARFKTFESIYRQVNLTSLTLGLNNFSKVVLNLDML 214
           S    +    +SIYRQ+NLT L LG NN S  VL+LDML
Sbjct: 440 SNNTLQGGVSDSIYRQLNLTYLALGSNNLSG-VLDLDML 476

BLAST of MS011857 vs. NCBI nr
Match: KAG7013910.1 (Receptor-like protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 221.9 bits (564), Expect = 5.5e-54
Identity = 135/219 (61.64%), Postives = 163/219 (74.43%), Query Frame = 0

Query: 1   NGSKLIEILNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDL 60
           N S+ +EIL+L S+NFSG IP SIG N KSL SL L   KF   +P+ I N+T L  IDL
Sbjct: 260 NLSESLEILSLSSTNFSGEIPYSIG-NAKSLISLHLSFSKFTGGLPKSIGNLTQLTNIDL 319

Query: 61  ---KFNGQLPNTWNNLQKLTNFQIHMNSFMDQLPDFLFNLTQPSSLT-TSNLFSSLLPMN 120
              KFNGQLPNTWN LQKLTNF+IHMNSFM  LP+ LFNLT  S++T +SNLFS  LP N
Sbjct: 320 SVNKFNGQLPNTWNKLQKLTNFRIHMNSFMGHLPNSLFNLTHLSNMTFSSNLFSGHLPTN 379

Query: 121 VSADRLSNLIHLN-ERNSLIGFVLSWLFSLPRLIFLDLSNNYFTRVIKDF-SNSLEFLNL 180
           V +D LSNLIHLN ERNSL G + SWL++LPRL +LDLS+N+F+ +++DF SNSLEFL+L
Sbjct: 380 VDSDALSNLIHLNLERNSLTGAIPSWLYALPRLNYLDLSHNHFSSLMRDFRSNSLEFLDL 439

Query: 181 SEKVARFKTFESIYRQVNLTSLTLGLNNFSKVVLNLDML 214
           S    +    +SIYRQ+NLT L LG NN S  VL+LDML
Sbjct: 440 SNNNLQGGVSDSIYRQLNLTYLALGSNNLSG-VLDLDML 476

BLAST of MS011857 vs. NCBI nr
Match: XP_022954251.1 (receptor-like protein 12 [Cucurbita moschata])

HSP 1 Score: 221.1 bits (562), Expect = 9.4e-54
Identity = 133/219 (60.73%), Postives = 164/219 (74.89%), Query Frame = 0

Query: 1   NGSKLIEILNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDL 60
           N S+ ++IL+L S+NFSG IP SIG N KSL SL L   KF   +P+ I N+T L  IDL
Sbjct: 260 NWSESLQILSLSSTNFSGEIPYSIG-NAKSLISLHLSFSKFTGGLPKSIGNLTQLTNIDL 319

Query: 61  ---KFNGQLPNTWNNLQKLTNFQIHMNSFMDQLPDFLFNLTQPSSLT-TSNLFSSLLPMN 120
              KFNGQLPNTWN LQKLTNF+IHMNSFM  LP+ LFNLT  S++T +SNLFS  LP N
Sbjct: 320 SVNKFNGQLPNTWNKLQKLTNFRIHMNSFMGHLPNSLFNLTHLSNMTFSSNLFSGHLPTN 379

Query: 121 VSADRLSNLIHLN-ERNSLIGFVLSWLFSLPRLIFLDLSNNYFTRVIKDF-SNSLEFLNL 180
           V +D LSNLIHL+ ERNSL G + SWL++LPRL +LDLS+N+F+ +++DF SNSLEFL+L
Sbjct: 380 VDSDALSNLIHLDLERNSLTGPIPSWLYALPRLNYLDLSHNHFSSLMRDFKSNSLEFLDL 439

Query: 181 SEKVARFKTFESIYRQVNLTSLTLGLNNFSKVVLNLDML 214
           S  + +    +SIYRQ+NLT L LG NN S  VL+LDML
Sbjct: 440 SNNILQGGVSDSIYRQLNLTYLALGSNNLSG-VLDLDML 476

BLAST of MS011857 vs. NCBI nr
Match: XP_022954036.1 (receptor-like protein 12 isoform X1 [Cucurbita moschata])

HSP 1 Score: 220.3 bits (560), Expect = 1.6e-53
Identity = 134/219 (61.19%), Postives = 163/219 (74.43%), Query Frame = 0

Query: 1   NGSKLIEILNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDL 60
           N S+ +EIL+L S+NFSG IP SIG N KSL SL L   KF   +P+ I N+T L  IDL
Sbjct: 256 NLSESLEILSLSSTNFSGEIPYSIG-NAKSLISLHLSFSKFTGGLPKSIGNLTQLTNIDL 315

Query: 61  ---KFNGQLPNTWNNLQKLTNFQIHMNSFMDQLPDFLFNLTQPSSLT-TSNLFSSLLPMN 120
              KFNGQLPNTWN LQKLTNF+IHMNSFM  LP+ LFNLT  S++T +SNLFS  LP N
Sbjct: 316 SVNKFNGQLPNTWNKLQKLTNFRIHMNSFMGHLPNSLFNLTHLSNMTFSSNLFSGHLPTN 375

Query: 121 VSADRLSNLIHLN-ERNSLIGFVLSWLFSLPRLIFLDLSNNYFTRVIKDF-SNSLEFLNL 180
           V +D LSNLIHL+ ERNSL G + SWL++LPRL +LDLS+N+F+ +++DF SNSLEFL+L
Sbjct: 376 VDSDALSNLIHLDLERNSLTGPIPSWLYALPRLNYLDLSHNHFSSLMRDFKSNSLEFLDL 435

Query: 181 SEKVARFKTFESIYRQVNLTSLTLGLNNFSKVVLNLDML 214
           S    +    +SIYRQ+NLT L LG NN S  VL+LDML
Sbjct: 436 SNNTLQGGVSDSIYRQLNLTYLALGSNNLSG-VLDLDML 472

BLAST of MS011857 vs. ExPASy Swiss-Prot
Match: Q9S9U3 (Receptor-like protein 53 OS=Arabidopsis thaliana OX=3702 GN=RLP53 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.2e-16
Identity = 70/207 (33.82%), Postives = 107/207 (51.69%), Query Frame = 0

Query: 2   GSKLIEILNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDL- 61
           G   +  L+L S+ FSG IP SIG N+ +L +LDL +  F+ +IP  I N++ L  + L 
Sbjct: 215 GLSHLTTLSLFSNKFSGQIPSSIG-NLSNLTTLDLSNNNFSGQIPSFIGNLSQLTFLGLF 274

Query: 62  --KFNGQLPNTWNNLQKLTNFQIHMNSFMDQLPDFLFNLTQPSSLTTS-NLFSSLLPMNV 121
              F G++P+++ NL +LT   +  N      P+ L NLT  S L+ S N F+  LP N+
Sbjct: 275 SNNFVGEIPSSFGNLNQLTRLYVDDNKLSGNFPNVLLNLTGLSLLSLSNNKFTGTLPPNI 334

Query: 122 SADRLSNLIHLN-ERNSLIGFVLSWLFSLPRLIFLDLSNNYFTRVIKDFSNSLEFLNLSE 181
           ++  LSNL+  +   N+  G   S+LF++P L ++ L+ N           +LEF N+S 
Sbjct: 335 TS--LSNLMDFDASDNAFTGTFPSFLFTIPSLTYIRLNGN-------QLKGTLEFGNISS 394

Query: 182 KVARFKTFESIYRQVNLTSLTLGLNNF 204
                          NL  L +G NNF
Sbjct: 395 -------------PSNLYELDIGNNNF 398

BLAST of MS011857 vs. ExPASy Swiss-Prot
Match: Q9LJW7 (Receptor-like protein 43 OS=Arabidopsis thaliana OX=3702 GN=RLP43 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.1e-16
Identity = 56/155 (36.13%), Postives = 90/155 (58.06%), Query Frame = 0

Query: 9   LNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDLKFN---GQ 68
           L+L  ++FSG +P SIG N+  L  LDL+  +F+ ++P  I N++ L T++L FN   GQ
Sbjct: 150 LDLSFNHFSGQVPSSIG-NLSHLTFLDLYCNQFSGQVPSSIGNLSHLTTLELSFNRFFGQ 209

Query: 69  LPNTWNNLQKLTNFQIHMNSFMDQLPDFLFNLTQPSSL-TTSNLFSSLLPMNVSADRLSN 128
            P++   L  LT   + +N+F+ Q+P  + NL+  +SL    N FS  +P  +    LS 
Sbjct: 210 FPSSIGGLSHLTTLNLFVNNFLGQIPSSIGNLSNLTSLYLCKNNFSGQIPSFIG--NLSQ 269

Query: 129 LIHLN-ERNSLIGFVLSWLFSLPRLIFLDLSNNYF 159
           L  L+   N+  G +  WL++LP L +++LS N F
Sbjct: 270 LTRLDLSSNNFFGEIPGWLWTLPNLFYVNLSYNTF 301

BLAST of MS011857 vs. ExPASy Swiss-Prot
Match: Q9SRL7 (Receptor-like protein 35 OS=Arabidopsis thaliana OX=3702 GN=RLP35 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-15
Identity = 72/200 (36.00%), Postives = 102/200 (51.00%), Query Frame = 0

Query: 9   LNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDLKFN---GQ 68
           L L S+ FSG IP SIG N+ +L  L L S  F  +IP  I N+  L  + L +N   G+
Sbjct: 202 LELSSNQFSGQIPSSIG-NLSNLTFLSLPSNDFFGQIPSSIGNLARLTYLYLSYNNFVGE 261

Query: 69  LPNTWNNLQKLTNFQIHMNSFMDQLPDFLFNLTQPSSLTTS-NLFSSLLPMNVSADRLSN 128
           +P+++ NL +L   Q+  N     +P  L NLT+ S+L  S N F+  +P N+S   LSN
Sbjct: 262 IPSSFGNLNQLIVLQVDSNKLSGNVPISLLNLTRLSALLLSHNQFTGTIPNNISL--LSN 321

Query: 129 LIHLN-ERNSLIGFVLSWLFSLPRLIFLDLSNNYFTRVIKDFSNSLEFLNLSEKVARFKT 188
           L+      N+  G + S LF++P LI LDLS+N         + +L F N+S        
Sbjct: 322 LMDFEASNNAFTGTLPSSLFNIPPLIRLDLSDN-------QLNGTLHFGNISS------- 378

Query: 189 FESIYRQVNLTSLTLGLNNF 204
                   NL  L +G NNF
Sbjct: 382 ------PSNLQYLIIGSNNF 378

BLAST of MS011857 vs. ExPASy Swiss-Prot
Match: P0DO05 (Receptor-like protein 9DC1 OS=Solanum pimpinellifolium OX=4084 GN=9DC1 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.6e-14
Identity = 67/209 (32.06%), Postives = 108/209 (51.67%), Query Frame = 0

Query: 1   NGSKLIEILNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDL 60
           N S  +  L + S N +  IP+S  + + SL  LD+     +  IP+ + N+T + ++DL
Sbjct: 261 NSSASLMKLYVHSVNIADRIPESFSH-LTSLHELDMGYTNLSGPIPKPLWNLTNIESLDL 320

Query: 61  KFN---GQLPNTWNNLQKLTNFQIHMNSFMDQLPDFLFNLTQPSSL-TTSNLFSSLLPMN 120
           ++N   G +P      +KL    +  N  +D   +FL   TQ   L  +SN  +  +P N
Sbjct: 321 RYNHLEGPIPQL-PIFEKLKKLSLFRNDNLDGGLEFLSFNTQLERLDLSSNSLTGPIPSN 380

Query: 121 VSADRLSNLIHLNERNSLIGFVLSWLFSLPRLIFLDLSNNYFTRVIKDF-SNSLEFLNLS 180
           +S  +    ++L+  N L G + SW+FSLP L+ LDLSNN F+  I++F S +L  + L 
Sbjct: 381 ISGLQNLECLYLSS-NHLNGSIPSWIFSLPSLVELDLSNNTFSGKIQEFKSKTLSAVTLK 440

Query: 181 EKVARFKTFESIYRQVNLTSLTLGLNNFS 205
           +   + +   S+  Q NL  L L  NN S
Sbjct: 441 QNKLKGRIPNSLLNQKNLQLLLLSHNNIS 466

BLAST of MS011857 vs. ExPASy Swiss-Prot
Match: P0DO06 (Receptor-like protein 9DC2 OS=Solanum pimpinellifolium OX=4084 GN=9DC2 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.6e-14
Identity = 67/209 (32.06%), Postives = 108/209 (51.67%), Query Frame = 0

Query: 1   NGSKLIEILNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDL 60
           N S  +  L + S N +  IP+S  + + SL  LD+     +  IP+ + N+T + ++DL
Sbjct: 261 NSSASLMKLYVHSVNIADRIPESFSH-LTSLHELDMGYTNLSGPIPKPLWNLTNIESLDL 320

Query: 61  KFN---GQLPNTWNNLQKLTNFQIHMNSFMDQLPDFLFNLTQPSSL-TTSNLFSSLLPMN 120
           ++N   G +P      +KL    +  N  +D   +FL   TQ   L  +SN  +  +P N
Sbjct: 321 RYNHLEGPIPQL-PIFEKLKKLSLFRNDNLDGGLEFLSFNTQLERLDLSSNSLTGPIPSN 380

Query: 121 VSADRLSNLIHLNERNSLIGFVLSWLFSLPRLIFLDLSNNYFTRVIKDF-SNSLEFLNLS 180
           +S  +    ++L+  N L G + SW+FSLP L+ LDLSNN F+  I++F S +L  + L 
Sbjct: 381 ISGLQNLECLYLSS-NHLNGSIPSWIFSLPSLVELDLSNNTFSGKIQEFKSKTLSAVTLK 440

Query: 181 EKVARFKTFESIYRQVNLTSLTLGLNNFS 205
           +   + +   S+  Q NL  L L  NN S
Sbjct: 441 QNKLKGRIPNSLLNQKNLQLLLLSHNNIS 466

BLAST of MS011857 vs. ExPASy TrEMBL
Match: A0A6J1CUM3 (receptor-like protein 12 OS=Momordica charantia OX=3673 GN=LOC111014737 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.6e-65
Identity = 158/243 (65.02%), Postives = 176/243 (72.43%), Query Frame = 0

Query: 1   NGSKLIEILNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDL 60
           N SK +EIL+LVS+NFSG IP+SIG N KSLKS++  SCKF  EIP  I N+T LNTIDL
Sbjct: 255 NWSKSLEILSLVSTNFSGEIPNSIG-NAKSLKSINFSSCKFIGEIPNSIGNLTQLNTIDL 314

Query: 61  ---------------------------KFNGQLPNTWNNLQKLTNFQIHMNSFMDQLPDF 120
                                      KFNGQL N+WNNLQKLTNF+IHMNSFM QLPD 
Sbjct: 315 FANKLTGGIPESIGNLKQLNTIDLSVNKFNGQLSNSWNNLQKLTNFKIHMNSFMGQLPDS 374

Query: 121 LFNLTQPSSLTTS-NLFSSLLPMNVSADRLSNLIHLN-ERNSLIGFVLSWLFSLPRLIFL 180
           LFNLTQ SSLTTS NLFS  LP NVSADRLSNL+HLN E NSLIG + SWLFSLP L FL
Sbjct: 375 LFNLTQLSSLTTSYNLFSGPLPTNVSADRLSNLVHLNLESNSLIGVIPSWLFSLPHLNFL 434

Query: 181 DLSNNYFTRVIKDF-SNSLEFLNLSEKVARFKTFESIYRQVNLTSLTLGLNNFSKVVLNL 214
           DLS+N+FT  +KDF S+SLEFL+LS+   +   FESIYRQVNLTSL LG NNFS  VLNL
Sbjct: 435 DLSDNHFTGFVKDFRSHSLEFLDLSKNKLQGGIFESIYRQVNLTSLALGSNNFSG-VLNL 494

BLAST of MS011857 vs. ExPASy TrEMBL
Match: A0A6J1GQE5 (receptor-like protein 12 OS=Cucurbita moschata OX=3662 GN=LOC111456563 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 4.6e-54
Identity = 133/219 (60.73%), Postives = 164/219 (74.89%), Query Frame = 0

Query: 1   NGSKLIEILNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDL 60
           N S+ ++IL+L S+NFSG IP SIG N KSL SL L   KF   +P+ I N+T L  IDL
Sbjct: 260 NWSESLQILSLSSTNFSGEIPYSIG-NAKSLISLHLSFSKFTGGLPKSIGNLTQLTNIDL 319

Query: 61  ---KFNGQLPNTWNNLQKLTNFQIHMNSFMDQLPDFLFNLTQPSSLT-TSNLFSSLLPMN 120
              KFNGQLPNTWN LQKLTNF+IHMNSFM  LP+ LFNLT  S++T +SNLFS  LP N
Sbjct: 320 SVNKFNGQLPNTWNKLQKLTNFRIHMNSFMGHLPNSLFNLTHLSNMTFSSNLFSGHLPTN 379

Query: 121 VSADRLSNLIHLN-ERNSLIGFVLSWLFSLPRLIFLDLSNNYFTRVIKDF-SNSLEFLNL 180
           V +D LSNLIHL+ ERNSL G + SWL++LPRL +LDLS+N+F+ +++DF SNSLEFL+L
Sbjct: 380 VDSDALSNLIHLDLERNSLTGPIPSWLYALPRLNYLDLSHNHFSSLMRDFKSNSLEFLDL 439

Query: 181 SEKVARFKTFESIYRQVNLTSLTLGLNNFSKVVLNLDML 214
           S  + +    +SIYRQ+NLT L LG NN S  VL+LDML
Sbjct: 440 SNNILQGGVSDSIYRQLNLTYLALGSNNLSG-VLDLDML 476

BLAST of MS011857 vs. ExPASy TrEMBL
Match: A0A6J1GPR7 (receptor-like protein 12 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456418 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 7.8e-54
Identity = 134/219 (61.19%), Postives = 163/219 (74.43%), Query Frame = 0

Query: 1   NGSKLIEILNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDL 60
           N S+ +EIL+L S+NFSG IP SIG N KSL SL L   KF   +P+ I N+T L  IDL
Sbjct: 256 NLSESLEILSLSSTNFSGEIPYSIG-NAKSLISLHLSFSKFTGGLPKSIGNLTQLTNIDL 315

Query: 61  ---KFNGQLPNTWNNLQKLTNFQIHMNSFMDQLPDFLFNLTQPSSLT-TSNLFSSLLPMN 120
              KFNGQLPNTWN LQKLTNF+IHMNSFM  LP+ LFNLT  S++T +SNLFS  LP N
Sbjct: 316 SVNKFNGQLPNTWNKLQKLTNFRIHMNSFMGHLPNSLFNLTHLSNMTFSSNLFSGHLPTN 375

Query: 121 VSADRLSNLIHLN-ERNSLIGFVLSWLFSLPRLIFLDLSNNYFTRVIKDF-SNSLEFLNL 180
           V +D LSNLIHL+ ERNSL G + SWL++LPRL +LDLS+N+F+ +++DF SNSLEFL+L
Sbjct: 376 VDSDALSNLIHLDLERNSLTGPIPSWLYALPRLNYLDLSHNHFSSLMRDFKSNSLEFLDL 435

Query: 181 SEKVARFKTFESIYRQVNLTSLTLGLNNFSKVVLNLDML 214
           S    +    +SIYRQ+NLT L LG NN S  VL+LDML
Sbjct: 436 SNNTLQGGVSDSIYRQLNLTYLALGSNNLSG-VLDLDML 472

BLAST of MS011857 vs. ExPASy TrEMBL
Match: A0A6J1JNP8 (receptor-like protein 12 OS=Cucurbita maxima OX=3661 GN=LOC111488526 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 2.3e-53
Identity = 133/219 (60.73%), Postives = 161/219 (73.52%), Query Frame = 0

Query: 1   NGSKLIEILNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDL 60
           N S+ +EIL+L S+NFSG IP SIG N KSL SLDL   KF   +P+ I N+T L  IDL
Sbjct: 260 NWSESLEILSLSSTNFSGEIPYSIG-NAKSLISLDLSFSKFTGGLPKSIGNLTQLTNIDL 319

Query: 61  ---KFNGQLPNTWNNLQKLTNFQIHMNSFMDQLPDFLFNLTQPSSLT-TSNLFSSLLPMN 120
              KFNGQLPN WN LQKLTNF+IHMNSFM  LP+ LFNLT  S++T +SNLFS  LP N
Sbjct: 320 SVNKFNGQLPNAWNKLQKLTNFRIHMNSFMGHLPNSLFNLTHLSNMTFSSNLFSGHLPTN 379

Query: 121 VSADRLSNLIHLN-ERNSLIGFVLSWLFSLPRLIFLDLSNNYFTRVIKDF-SNSLEFLNL 180
           V +D LSNLIHL+ ERNSL G + SWL+ LPRL +LDLS+N+F+ +++DF SNSLEFL+L
Sbjct: 380 VDSDALSNLIHLDLERNSLTGAIPSWLYELPRLNYLDLSHNHFSSLMRDFRSNSLEFLDL 439

Query: 181 SEKVARFKTFESIYRQVNLTSLTLGLNNFSKVVLNLDML 214
           S    +    +SIYRQ+NLT L LG NN S  VL+LD L
Sbjct: 440 SNNNLQGGVCDSIYRQLNLTYLALGSNNLSG-VLDLDKL 476

BLAST of MS011857 vs. ExPASy TrEMBL
Match: A0A6J1GPW9 (receptor-like protein 12 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456418 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 3.9e-53
Identity = 133/219 (60.73%), Postives = 162/219 (73.97%), Query Frame = 0

Query: 1   NGSKLIEILNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDL 60
           N S+ + IL+L S+NFSG IP SIG N KSL SL L   KF   +P+ I N+T L  IDL
Sbjct: 256 NLSESLXILSLSSTNFSGEIPYSIG-NAKSLISLHLSFSKFTGGLPKSIGNLTQLTNIDL 315

Query: 61  ---KFNGQLPNTWNNLQKLTNFQIHMNSFMDQLPDFLFNLTQPSSLT-TSNLFSSLLPMN 120
              KFNGQLPNTWN LQKLTNF+IHMNSFM  LP+ LFNLT  S++T +SNLFS  LP N
Sbjct: 316 SVNKFNGQLPNTWNKLQKLTNFRIHMNSFMGHLPNSLFNLTHLSNMTFSSNLFSGHLPTN 375

Query: 121 VSADRLSNLIHLN-ERNSLIGFVLSWLFSLPRLIFLDLSNNYFTRVIKDF-SNSLEFLNL 180
           V +D LSNLIHL+ ERNSL G + SWL++LPRL +LDLS+N+F+ +++DF SNSLEFL+L
Sbjct: 376 VDSDALSNLIHLDLERNSLTGPIPSWLYALPRLNYLDLSHNHFSSLMRDFKSNSLEFLDL 435

Query: 181 SEKVARFKTFESIYRQVNLTSLTLGLNNFSKVVLNLDML 214
           S    +    +SIYRQ+NLT L LG NN S  VL+LDML
Sbjct: 436 SNNTLQGGVSDSIYRQLNLTYLALGSNNLSG-VLDLDML 472

BLAST of MS011857 vs. TAIR 10
Match: AT4G13820.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 89.4 bits (220), Expect = 4.0e-18
Identity = 76/213 (35.68%), Postives = 111/213 (52.11%), Query Frame = 0

Query: 9   LNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDLK---FNGQ 68
           L+L S+NFSG +PDSIG ++K L+ L L  C    +IP  + N+T L  +DL    F G+
Sbjct: 113 LDLGSNNFSGILPDSIG-SLKYLRVLSLGDCNLFGKIPSSLGNLTYLTNLDLSVNDFTGE 172

Query: 69  LPNTWNNLQKLTNFQIHMNSFMDQLPDFLFNLTQPSSLTT-SNLFSSLLPMNVSADRLSN 128
           LP++  +L KLT   +         P  L NL++ + +   SN F  +LP N+S+  LS 
Sbjct: 173 LPDSMGHLNKLTELHLGSAKLSGNFPSMLLNLSELTLIDLGSNQFGGMLPSNMSS--LSK 232

Query: 129 LIHLN-ERNSLIGFVLSWLFSLPRLIFLDLSNNYFTRVIKDFSN-----SLEFLNLSEKV 188
           L++   +RNS  G + S LF LP L  L L  N F   + DF N     +L  L+L E  
Sbjct: 233 LVYFGIDRNSFSGSIPSSLFMLPSLTSLVLGRNDFNGPL-DFGNISSPSNLGVLSLLENN 292

Query: 189 ARFKTFESIYRQVNLTSLTLGLNNFSKVVLNLD 212
                 ESI + V L  L L L N  + +++ +
Sbjct: 293 FNGPIPESISKLVGLFYLDLSLWNTKRGMVDFN 321

BLAST of MS011857 vs. TAIR 10
Match: AT5G27060.1 (receptor like protein 53 )

HSP 1 Score: 85.9 bits (211), Expect = 4.4e-17
Identity = 70/207 (33.82%), Postives = 107/207 (51.69%), Query Frame = 0

Query: 2   GSKLIEILNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDL- 61
           G   +  L+L S+ FSG IP SIG N+ +L +LDL +  F+ +IP  I N++ L  + L 
Sbjct: 215 GLSHLTTLSLFSNKFSGQIPSSIG-NLSNLTTLDLSNNNFSGQIPSFIGNLSQLTFLGLF 274

Query: 62  --KFNGQLPNTWNNLQKLTNFQIHMNSFMDQLPDFLFNLTQPSSLTTS-NLFSSLLPMNV 121
              F G++P+++ NL +LT   +  N      P+ L NLT  S L+ S N F+  LP N+
Sbjct: 275 SNNFVGEIPSSFGNLNQLTRLYVDDNKLSGNFPNVLLNLTGLSLLSLSNNKFTGTLPPNI 334

Query: 122 SADRLSNLIHLN-ERNSLIGFVLSWLFSLPRLIFLDLSNNYFTRVIKDFSNSLEFLNLSE 181
           ++  LSNL+  +   N+  G   S+LF++P L ++ L+ N           +LEF N+S 
Sbjct: 335 TS--LSNLMDFDASDNAFTGTFPSFLFTIPSLTYIRLNGN-------QLKGTLEFGNISS 394

Query: 182 KVARFKTFESIYRQVNLTSLTLGLNNF 204
                          NL  L +G NNF
Sbjct: 395 -------------PSNLYELDIGNNNF 398

BLAST of MS011857 vs. TAIR 10
Match: AT3G28890.1 (receptor like protein 43 )

HSP 1 Score: 85.5 bits (210), Expect = 5.7e-17
Identity = 56/155 (36.13%), Postives = 90/155 (58.06%), Query Frame = 0

Query: 9   LNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDLKFN---GQ 68
           L+L  ++FSG +P SIG N+  L  LDL+  +F+ ++P  I N++ L T++L FN   GQ
Sbjct: 150 LDLSFNHFSGQVPSSIG-NLSHLTFLDLYCNQFSGQVPSSIGNLSHLTTLELSFNRFFGQ 209

Query: 69  LPNTWNNLQKLTNFQIHMNSFMDQLPDFLFNLTQPSSL-TTSNLFSSLLPMNVSADRLSN 128
            P++   L  LT   + +N+F+ Q+P  + NL+  +SL    N FS  +P  +    LS 
Sbjct: 210 FPSSIGGLSHLTTLNLFVNNFLGQIPSSIGNLSNLTSLYLCKNNFSGQIPSFIG--NLSQ 269

Query: 129 LIHLN-ERNSLIGFVLSWLFSLPRLIFLDLSNNYF 159
           L  L+   N+  G +  WL++LP L +++LS N F
Sbjct: 270 LTRLDLSSNNFFGEIPGWLWTLPNLFYVNLSYNTF 301

BLAST of MS011857 vs. TAIR 10
Match: AT3G28890.2 (receptor like protein 43 )

HSP 1 Score: 85.5 bits (210), Expect = 5.7e-17
Identity = 56/155 (36.13%), Postives = 90/155 (58.06%), Query Frame = 0

Query: 9   LNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDLKFN---GQ 68
           L+L  ++FSG +P SIG N+  L  LDL+  +F+ ++P  I N++ L T++L FN   GQ
Sbjct: 150 LDLSFNHFSGQVPSSIG-NLSHLTFLDLYCNQFSGQVPSSIGNLSHLTTLELSFNRFFGQ 209

Query: 69  LPNTWNNLQKLTNFQIHMNSFMDQLPDFLFNLTQPSSL-TTSNLFSSLLPMNVSADRLSN 128
            P++   L  LT   + +N+F+ Q+P  + NL+  +SL    N FS  +P  +    LS 
Sbjct: 210 FPSSIGGLSHLTTLNLFVNNFLGQIPSSIGNLSNLTSLYLCKNNFSGQIPSFIG--NLSQ 269

Query: 129 LIHLN-ERNSLIGFVLSWLFSLPRLIFLDLSNNYF 159
           L  L+   N+  G +  WL++LP L +++LS N F
Sbjct: 270 LTRLDLSSNNFFGEIPGWLWTLPNLFYVNLSYNTF 301

BLAST of MS011857 vs. TAIR 10
Match: AT3G11080.1 (receptor like protein 35 )

HSP 1 Score: 84.0 bits (206), Expect = 1.7e-16
Identity = 72/200 (36.00%), Postives = 102/200 (51.00%), Query Frame = 0

Query: 9   LNLVSSNFSGGIPDSIGYNVKSLKSLDLHSCKFNREIPEKIRNITLLNTIDLKFN---GQ 68
           L L S+ FSG IP SIG N+ +L  L L S  F  +IP  I N+  L  + L +N   G+
Sbjct: 202 LELSSNQFSGQIPSSIG-NLSNLTFLSLPSNDFFGQIPSSIGNLARLTYLYLSYNNFVGE 261

Query: 69  LPNTWNNLQKLTNFQIHMNSFMDQLPDFLFNLTQPSSLTTS-NLFSSLLPMNVSADRLSN 128
           +P+++ NL +L   Q+  N     +P  L NLT+ S+L  S N F+  +P N+S   LSN
Sbjct: 262 IPSSFGNLNQLIVLQVDSNKLSGNVPISLLNLTRLSALLLSHNQFTGTIPNNISL--LSN 321

Query: 129 LIHLN-ERNSLIGFVLSWLFSLPRLIFLDLSNNYFTRVIKDFSNSLEFLNLSEKVARFKT 188
           L+      N+  G + S LF++P LI LDLS+N         + +L F N+S        
Sbjct: 322 LMDFEASNNAFTGTLPSSLFNIPPLIRLDLSDN-------QLNGTLHFGNISS------- 378

Query: 189 FESIYRQVNLTSLTLGLNNF 204
                   NL  L +G NNF
Sbjct: 382 ------PSNLQYLIIGSNNF 378

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022145234.15.3e-6565.02receptor-like protein 12 [Momordica charantia][more]
KAG6575370.18.5e-5561.64Receptor-like protein 34, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7013910.15.5e-5461.64Receptor-like protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022954251.19.4e-5460.73receptor-like protein 12 [Cucurbita moschata][more]
XP_022954036.11.6e-5361.19receptor-like protein 12 isoform X1 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q9S9U36.2e-1633.82Receptor-like protein 53 OS=Arabidopsis thaliana OX=3702 GN=RLP53 PE=3 SV=1[more]
Q9LJW78.1e-1636.13Receptor-like protein 43 OS=Arabidopsis thaliana OX=3702 GN=RLP43 PE=2 SV=1[more]
Q9SRL72.4e-1536.00Receptor-like protein 35 OS=Arabidopsis thaliana OX=3702 GN=RLP35 PE=3 SV=1[more]
P0DO057.6e-1432.06Receptor-like protein 9DC1 OS=Solanum pimpinellifolium OX=4084 GN=9DC1 PE=3 SV=1[more]
P0DO067.6e-1432.06Receptor-like protein 9DC2 OS=Solanum pimpinellifolium OX=4084 GN=9DC2 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1CUM32.6e-6565.02receptor-like protein 12 OS=Momordica charantia OX=3673 GN=LOC111014737 PE=4 SV=... [more]
A0A6J1GQE54.6e-5460.73receptor-like protein 12 OS=Cucurbita moschata OX=3662 GN=LOC111456563 PE=4 SV=1[more]
A0A6J1GPR77.8e-5461.19receptor-like protein 12 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11145641... [more]
A0A6J1JNP82.3e-5360.73receptor-like protein 12 OS=Cucurbita maxima OX=3661 GN=LOC111488526 PE=4 SV=1[more]
A0A6J1GPW93.9e-5360.73receptor-like protein 12 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11145641... [more]
Match NameE-valueIdentityDescription
AT4G13820.14.0e-1835.68Leucine-rich repeat (LRR) family protein [more]
AT5G27060.14.4e-1733.82receptor like protein 53 [more]
AT3G28890.15.7e-1736.13receptor like protein 43 [more]
AT3G28890.25.7e-1736.13receptor like protein 43 [more]
AT3G11080.11.7e-1636.00receptor like protein 35 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 60..216
e-value: 2.0E-13
score: 52.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..59
e-value: 1.5E-9
score: 39.8
NoneNo IPR availablePANTHERPTHR48061LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATEDcoord: 5..63
NoneNo IPR availablePANTHERPTHR48061:SF2LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKEcoord: 5..63
NoneNo IPR availablePANTHERPTHR48061:SF2LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKEcoord: 61..211
NoneNo IPR availablePANTHERPTHR48061LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATEDcoord: 61..211
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 5..210

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS011857.1MS011857.1mRNA