MS011803 (gene) Bitter gourd (TR) v1

Overview


Name	MS011803
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	HTH cro/C1-type domain-containing protein
Location	scaffold11: 846343 .. 846775 (+)
RNA-Seq Expression	MS011803
Synteny	MS011803

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGAGTCGATTCCCGGGAGCAATTACTCAAGATTGGGAGCCAATGGTGCTCCACAAGGCGAAGCCGAGGGCAGGATCTCCGCGATCCGAAGGCCGTGAACCAGGCGATCAGATCCGGCGCGCAGGTCCAGACCGTGAAGAAGTTCGACGCCGGATCGAACAAGAAAGCGGCGGCGGAGGCGGTGAATGCGAGGAAGCTGGACGAAGGCACGGAGGCGGCGGCTCTGGATCGCGTATCGGCGGAGGTGAGGCTGGCGATTCAGAAGGCGCGGCTGGAGAAGAAGATGAGCCAGGCGGAGGTTGCGAAGCAGATCAACGAGCGCACTCAGGTGGTGCAGGAGTACGAGAACGGCAAGGCCGTGCCGAATCAGGCCGTTCTGGCGAAGCTGGAGAAGGTTTTAGGCGTCAAACTCCGTGGAAAATCAGGCAAG

mRNA sequence

ATGCCGAGTCGATTCCCGGGAGCAATTACTCAAGATTGGGAGCCAATGGTGCTCCACAAGGCGAAGCCGAGGCAGGATCTCCGCGATCCGAAGGCCGTGAACCAGGCGATCAGATCCGGCGCGCAGGTCCAGACCGTGAAGAAGTTCGACGCCGGATCGAACAAGAAAGCGGCGGCGGAGGCGGTGAATGCGAGGAAGCTGGACGAAGGCACGGAGGCGGCGGCTCTGGATCGCGTATCGGCGGAGGTGAGGCTGGCGATTCAGAAGGCGCGGCTGGAGAAGAAGATGAGCCAGGCGGAGGTTGCGAAGCAGATCAACGAGCGCACTCAGGTGGTGCAGGAGTACGAGAACGGCAAGGCCGTGCCGAATCAGGCCGTTCTGGCGAAGCTGGAGAAGGTTTTAGGCGTCAAACTCCGTGGAAAATCAGGCAAG

Coding sequence (CDS)

ATGCCGAGTCGATTCCCGGGAGCAATTACTCAAGATTGGGAGCCAATGGTGCTCCACAAGGCGAAGCCGAGGCAGGATCTCCGCGATCCGAAGGCCGTGAACCAGGCGATCAGATCCGGCGCGCAGGTCCAGACCGTGAAGAAGTTCGACGCCGGATCGAACAAGAAAGCGGCGGCGGAGGCGGTGAATGCGAGGAAGCTGGACGAAGGCACGGAGGCGGCGGCTCTGGATCGCGTATCGGCGGAGGTGAGGCTGGCGATTCAGAAGGCGCGGCTGGAGAAGAAGATGAGCCAGGCGGAGGTTGCGAAGCAGATCAACGAGCGCACTCAGGTGGTGCAGGAGTACGAGAACGGCAAGGCCGTGCCGAATCAGGCCGTTCTGGCGAAGCTGGAGAAGGTTTTAGGCGTCAAACTCCGTGGAAAATCAGGCAAG

Protein sequence

MPSRFPGAITQDWEPMVLHKAKPRQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGKAVPNQAVLAKLEKVLGVKLRGKSGK

Homology

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BLAST of MS011803 vs. NCBI nr
Match: XP_038890461.1 (multiprotein-bridging factor 1c [Benincasa hispida])

HSP 1 Score: 237.3 bits (604), Expect = 8.4e-59
Identity = 131/145 (90.34%), Postives = 137/145 (94.48%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSRFPGAI QDWEP+VLHKAKP+ Q LRDPKAVNQAIRSGA VQTVKKFDAGSNKKAAA
Sbjct: 1   MPSRFPGAIAQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAAVQTVKKFDAGSNKKAAA 60

Query: 61  EAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGK 120
             VNARKLDE TE AALDRV+AEVRLAIQKARLEKKMSQAE+AKQINERTQVVQEYENGK
Sbjct: 61  APVNARKLDELTEPAALDRVAAEVRLAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQAVLAKLEKVLGVKLRGKSGK 145
           AVPNQAVLAK+EKVLGVKLRG+SGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 145

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BLAST of MS011803 vs. NCBI nr
Match: XP_022965996.1 (multiprotein-bridging factor 1c [Cucurbita maxima] >XP_023537921.1 multiprotein-bridging factor 1c [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233.8 bits (595), Expect = 9.3e-58
Identity = 128/145 (88.28%), Postives = 135/145 (93.10%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSRFPGAI+QDWEP+VLHK+KP+ QDLRDPKAVNQAIRSGA V TVKKFDAGSNKKA A
Sbjct: 1   MPSRFPGAISQDWEPVVLHKSKPKAQDLRDPKAVNQAIRSGAPVLTVKKFDAGSNKKATA 60

Query: 61  EAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGK 120
             VNARKL+EGTE AALDRV  EVR AIQKARLEKKMSQAE+AKQINERTQVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVPTEVRHAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQAVLAKLEKVLGVKLRGKSGK 145
           AVPNQAVLAK+EKVLGVKLRGKSGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGKSGK 145

[Close]

BLAST of MS011803 vs. NCBI nr
Match: XP_022937454.1 (multiprotein-bridging factor 1c [Cucurbita moschata] >KAG6586426.1 Multiprotein-bridging factor 1c, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021281.1 Multiprotein-bridging factor 1c, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 232.3 bits (591), Expect = 2.7e-57
Identity = 127/145 (87.59%), Postives = 134/145 (92.41%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSRFPGAI+QDWEP+VLHK+KP+ QDLRDPKAVNQAIRSGA V TVKKFDAGSNKKA A
Sbjct: 1   MPSRFPGAISQDWEPVVLHKSKPKAQDLRDPKAVNQAIRSGAPVLTVKKFDAGSNKKATA 60

Query: 61  EAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGK 120
             VNARKL+EGTE AALDRV  EVR AIQKARLEKKMSQAE+ KQINERTQVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVPTEVRHAIQKARLEKKMSQAELGKQINERTQVVQEYENGK 120

Query: 121 AVPNQAVLAKLEKVLGVKLRGKSGK 145
           AVPNQAVLAK+EKVLGVKLRGKSGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGKSGK 145

[Close]

BLAST of MS011803 vs. NCBI nr
Match: TYK10712.1 (multiprotein-bridging factor 1c [Cucumis melo var. makuwa])

HSP 1 Score: 231.5 bits (589), Expect = 4.6e-57
Identity = 126/145 (86.90%), Postives = 134/145 (92.41%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSRFPGA++QDWEP+VLHKAKP+ Q LRDPKAVNQAIRSGA VQTVKKFDAG NKK AA
Sbjct: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAA 60

Query: 61  EAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGK 120
             VNARKLDEGTE AALDRV  EVR AIQKAR+EKKMSQAE+AKQINERTQVVQEYENGK
Sbjct: 61  APVNARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQAVLAKLEKVLGVKLRGKSGK 145
           AVPNQAVLAK+EKVLGVKLRG+SGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 145

[Close]

BLAST of MS011803 vs. NCBI nr
Match: XP_008458302.1 (PREDICTED: multiprotein-bridging factor 1c [Cucumis melo])

HSP 1 Score: 231.1 bits (588), Expect = 6.0e-57
Identity = 126/145 (86.90%), Postives = 134/145 (92.41%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSRFPGA++QDWEP+VLHKAKP+ Q LRDPKAVNQAIRSGA VQTVKKFDAG NKK AA
Sbjct: 68  MPSRFPGALSQDWEPVVLHKAKPKAQVLRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAA 127

Query: 61  EAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGK 120
             VNARKLDEGTE AALDRV  EVR AIQKAR+EKKMSQAE+AKQINERTQVVQEYENGK
Sbjct: 128 APVNARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGK 187

Query: 121 AVPNQAVLAKLEKVLGVKLRGKSGK 145
           AVPNQAVLAK+EKVLGVKLRG+SGK
Sbjct: 188 AVPNQAVLAKMEKVLGVKLRGRSGK 212

[Close]

BLAST of MS011803 vs. ExPASy Swiss-Prot
Match: Q9LV58 (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.3e-54
Identity = 117/148 (79.05%), Postives = 131/148 (88.51%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSR+PGA+TQDWEP+VLHK+K + QDLRDPKAVN A+R+G  VQTVKKFDAGSNKK  +
Sbjct: 1   MPSRYPGAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKS 60

Query: 61  EAV---NARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYE 120
            AV   N +KL+E TE AA+DRV AEVRL IQKARLEKKMSQA++AKQINERTQVVQEYE
Sbjct: 61  TAVPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYE 120

Query: 121 NGKAVPNQAVLAKLEKVLGVKLRGKSGK 145
           NGKAVPNQAVLAK+EKVLGVKLRGK GK
Sbjct: 121 NGKAVPNQAVLAKMEKVLGVKLRGKIGK 148

[Close]

BLAST of MS011803 vs. ExPASy Swiss-Prot
Match: Q9LXT3 (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 9.1e-32
Identity = 76/137 (55.47%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 7   GAITQDWEPMVLHKAKPRQDL-RDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA-EAVNA 66
           G ITQDWEP+V+ K  P     RD K VN A RSGA ++TV+KF+AGSNK A++  ++N 
Sbjct: 5   GPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNT 64

Query: 67  RKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGKAVPNQ 126
           +KLD+ TE  + DRV  E++ AI +AR EKK++Q+++A  INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQ 124

Query: 127 AVLAKLEKVLGVKLRGK 142
            +L+KLE+ LG KLRGK
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]

BLAST of MS011803 vs. ExPASy Swiss-Prot
Match: Q9SJI8 (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-29
Identity = 73/138 (52.90%), Postives = 104/138 (75.36%), Query Frame = 0


Query: 7   GAITQDWEPMVLHKAKPRQDL--RDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA-EAVN 66
           G ITQDWEP+V+ K KP      RD K VN A RSGA ++TV+KF+AG+NK A++  ++N
Sbjct: 5   GPITQDWEPVVIRK-KPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLN 64

Query: 67  ARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGKAVPN 126
            + LD+ TE    +RV  E++ AI +AR +KK++Q+++A+ INE+ QV+QEYE+GKA+PN
Sbjct: 65  TKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPN 124

Query: 127 QAVLAKLEKVLGVKLRGK 142
           Q +L+KLE+ LG KLRGK
Sbjct: 125 QQILSKLERALGAKLRGK 141

[Close]

BLAST of MS011803 vs. ExPASy Swiss-Prot
Match: Q6GPQ6 (Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 GN=edf1 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.3e-17
Identity = 58/132 (43.94%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 12  DWEPM-VLHKAKP-RQDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAEAVNARKLDE 71
           DW+ + VL K  P     +  +A+  A R G +V+T KK+ AG NK+      N  KLD 
Sbjct: 5   DWDTVTVLRKKGPTAAQAKSKQAITAAQRRGEEVETSKKWSAGQNKQHTITR-NTAKLDR 64

Query: 72  GTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGKAVPNQAVLAK 131
            TE    DRV  EV   IQ+ R  K M+Q ++A +INE+ QV+ +YE GKA+PN  V+ K
Sbjct: 65  ETEELHHDRVPLEVGKVIQQGRQGKGMTQKDLATKINEKPQVIADYECGKAIPNNQVMGK 124

Query: 132 LEKVLGVKLRGK 142
           +E+V+G+KLRGK
Sbjct: 125 IERVIGLKLRGK 135

[Close]

BLAST of MS011803 vs. ExPASy Swiss-Prot
Match: Q5A940 (Multiprotein-bridging factor 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MBF1 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-16
Identity = 57/142 (40.14%), Postives = 89/142 (62.68%), Query Frame = 0


Query: 9   ITQDWEPMVL--HKAK-----PRQDL-RDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAAE 68
           ++ DW+ + +   KA+     PR+++ +    +N A R+G  V T KK+   +N K+  E
Sbjct: 1   MSSDWDSVTIIGQKARVGGGGPRENVAKTSSQLNAARRAGLVVGTEKKYGT-ANTKSNPE 60

Query: 69  AVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGKA 128
                KLD   +  A+ +V   V  AIQ+AR EKK++Q E+A ++NE+  V+ +YE G+A
Sbjct: 61  GQRLTKLDATDDVVAVKKVDVSVGKAIQQARQEKKLTQKELATKVNEKPNVINDYEAGRA 120

Query: 129 VPNQAVLAKLEKVLGVKLRGKS 143
           +PNQ +LAKLE+ LGVKLRGK+
Sbjct: 121 IPNQQLLAKLERALGVKLRGKN 141

[Close]

BLAST of MS011803 vs. ExPASy TrEMBL
Match: A0A6J1HN61 (multiprotein-bridging factor 1c OS=Cucurbita maxima OX=3661 GN=LOC111465714 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.5e-58
Identity = 128/145 (88.28%), Postives = 135/145 (93.10%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSRFPGAI+QDWEP+VLHK+KP+ QDLRDPKAVNQAIRSGA V TVKKFDAGSNKKA A
Sbjct: 1   MPSRFPGAISQDWEPVVLHKSKPKAQDLRDPKAVNQAIRSGAPVLTVKKFDAGSNKKATA 60

Query: 61  EAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGK 120
             VNARKL+EGTE AALDRV  EVR AIQKARLEKKMSQAE+AKQINERTQVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVPTEVRHAIQKARLEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQAVLAKLEKVLGVKLRGKSGK 145
           AVPNQAVLAK+EKVLGVKLRGKSGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGKSGK 145

[Close]

BLAST of MS011803 vs. ExPASy TrEMBL
Match: A0A6J1FB80 (multiprotein-bridging factor 1c OS=Cucurbita moschata OX=3662 GN=LOC111443860 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.3e-57
Identity = 127/145 (87.59%), Postives = 134/145 (92.41%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSRFPGAI+QDWEP+VLHK+KP+ QDLRDPKAVNQAIRSGA V TVKKFDAGSNKKA A
Sbjct: 1   MPSRFPGAISQDWEPVVLHKSKPKAQDLRDPKAVNQAIRSGAPVLTVKKFDAGSNKKATA 60

Query: 61  EAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGK 120
             VNARKL+EGTE AALDRV  EVR AIQKARLEKKMSQAE+ KQINERTQVVQEYENGK
Sbjct: 61  APVNARKLEEGTEPAALDRVPTEVRHAIQKARLEKKMSQAELGKQINERTQVVQEYENGK 120

Query: 121 AVPNQAVLAKLEKVLGVKLRGKSGK 145
           AVPNQAVLAK+EKVLGVKLRGKSGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGKSGK 145

[Close]

BLAST of MS011803 vs. ExPASy TrEMBL
Match: A0A5D3CHG2 (Multiprotein-bridging factor 1c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00210 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.2e-57
Identity = 126/145 (86.90%), Postives = 134/145 (92.41%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSRFPGA++QDWEP+VLHKAKP+ Q LRDPKAVNQAIRSGA VQTVKKFDAG NKK AA
Sbjct: 1   MPSRFPGALSQDWEPVVLHKAKPKAQALRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAA 60

Query: 61  EAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGK 120
             VNARKLDEGTE AALDRV  EVR AIQKAR+EKKMSQAE+AKQINERTQVVQEYENGK
Sbjct: 61  APVNARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGK 120

Query: 121 AVPNQAVLAKLEKVLGVKLRGKSGK 145
           AVPNQAVLAK+EKVLGVKLRG+SGK
Sbjct: 121 AVPNQAVLAKMEKVLGVKLRGRSGK 145

[Close]

BLAST of MS011803 vs. ExPASy TrEMBL
Match: A0A5A7V2S1 (Multiprotein-bridging factor 1c OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001220 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.9e-57
Identity = 126/145 (86.90%), Postives = 134/145 (92.41%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSRFPGA++QDWEP+VLHKAKP+ Q LRDPKAVNQAIRSGA VQTVKKFDAG NKK AA
Sbjct: 68  MPSRFPGALSQDWEPVVLHKAKPKAQVLRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAA 127

Query: 61  EAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGK 120
             VNARKLDEGTE AALDRV  EVR AIQKAR+EKKMSQAE+AKQINERTQVVQEYENGK
Sbjct: 128 APVNARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGK 187

Query: 121 AVPNQAVLAKLEKVLGVKLRGKSGK 145
           AVPNQAVLAK+EKVLGVKLRG+SGK
Sbjct: 188 AVPNQAVLAKMEKVLGVKLRGRSGK 212

[Close]

BLAST of MS011803 vs. ExPASy TrEMBL
Match: A0A1S3C8T1 (multiprotein-bridging factor 1c OS=Cucumis melo OX=3656 GN=LOC103497758 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.9e-57
Identity = 126/145 (86.90%), Postives = 134/145 (92.41%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSRFPGA++QDWEP+VLHKAKP+ Q LRDPKAVNQAIRSGA VQTVKKFDAG NKK AA
Sbjct: 68  MPSRFPGALSQDWEPVVLHKAKPKAQVLRDPKAVNQAIRSGAPVQTVKKFDAGLNKKVAA 127

Query: 61  EAVNARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGK 120
             VNARKLDEGTE AALDRV  EVR AIQKAR+EKKMSQAE+AKQINERTQVVQEYENGK
Sbjct: 128 APVNARKLDEGTEPAALDRVGVEVRQAIQKARVEKKMSQAELAKQINERTQVVQEYENGK 187

Query: 121 AVPNQAVLAKLEKVLGVKLRGKSGK 145
           AVPNQAVLAK+EKVLGVKLRG+SGK
Sbjct: 188 AVPNQAVLAKMEKVLGVKLRGRSGK 212

[Close]

BLAST of MS011803 vs. TAIR 10
Match: AT3G24500.1 (multiprotein bridging factor 1C )

HSP 1 Score: 213.8 bits (543), Expect = 9.3e-56
Identity = 117/148 (79.05%), Postives = 131/148 (88.51%), Query Frame = 0


Query: 1   MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
           MPSR+PGA+TQDWEP+VLHK+K + QDLRDPKAVN A+R+G  VQTVKKFDAGSNKK  +
Sbjct: 1   MPSRYPGAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKS 60

Query: 61  EAV---NARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYE 120
            AV   N +KL+E TE AA+DRV AEVRL IQKARLEKKMSQA++AKQINERTQVVQEYE
Sbjct: 61  TAVPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYE 120

Query: 121 NGKAVPNQAVLAKLEKVLGVKLRGKSGK 145
           NGKAVPNQAVLAK+EKVLGVKLRGK GK
Sbjct: 121 NGKAVPNQAVLAKMEKVLGVKLRGKIGK 148

[Close]

BLAST of MS011803 vs. TAIR 10
Match: AT3G58680.1 (multiprotein bridging factor 1B )

HSP 1 Score: 137.9 bits (346), Expect = 6.5e-33
Identity = 76/137 (55.47%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 7   GAITQDWEPMVLHKAKPRQDL-RDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA-EAVNA 66
           G ITQDWEP+V+ K  P     RD K VN A RSGA ++TV+KF+AGSNK A++  ++N 
Sbjct: 5   GPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNT 64

Query: 67  RKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGKAVPNQ 126
           +KLD+ TE  + DRV  E++ AI +AR EKK++Q+++A  INE+ QV+QEYE+GKA+PNQ
Sbjct: 65  KKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQ 124

Query: 127 AVLAKLEKVLGVKLRGK 142
            +L+KLE+ LG KLRGK
Sbjct: 125 QILSKLERALGAKLRGK 141

[Close]

BLAST of MS011803 vs. TAIR 10
Match: AT2G42680.1 (multiprotein bridging factor 1A )

HSP 1 Score: 130.6 bits (327), Expect = 1.0e-30
Identity = 73/138 (52.90%), Postives = 104/138 (75.36%), Query Frame = 0


Query: 7   GAITQDWEPMVLHKAKPRQDL--RDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA-EAVN 66
           G ITQDWEP+V+ K KP      RD K VN A RSGA ++TV+KF+AG+NK A++  ++N
Sbjct: 5   GPITQDWEPVVIRK-KPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLN 64

Query: 67  ARKLDEGTEAAALDRVSAEVRLAIQKARLEKKMSQAEVAKQINERTQVVQEYENGKAVPN 126
            + LD+ TE    +RV  E++ AI +AR +KK++Q+++A+ INE+ QV+QEYE+GKA+PN
Sbjct: 65  TKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPN 124

Query: 127 QAVLAKLEKVLGVKLRGK 142
           Q +L+KLE+ LG KLRGK
Sbjct: 125 QQILSKLERALGAKLRGK 141

[Close]

BLAST of MS011803 vs. TAIR 10
Match: AT3G24500.2 (multiprotein bridging factor 1C )

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-27
Identity = 64/95 (67.37%), Postives = 78/95 (82.11%), Query Frame = 0


Query: 1  MPSRFPGAITQDWEPMVLHKAKPR-QDLRDPKAVNQAIRSGAQVQTVKKFDAGSNKKAAA 60
          MPSR+PGA+TQDWEP+VLHK+K + QDLRDPKAVN A+R+G  VQTVKKFDAGSNKK  +
Sbjct: 1  MPSRYPGAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKS 60

Query: 61 EAV---NARKLDEGTEAAALDRVSAEVRLAIQKAR 92
           AV   N +KL+E TE AA+DRV AEVRL +++ R
Sbjct: 61 TAVPVINTKKLEEETEPAAMDRVKAEVRLCLRRWR 95

The following BLAST results are available for this feature:

BLAST of MS011803 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890461.1	8.4e-59	90.34	multiprotein-bridging factor 1c [Benincasa hispida]	[more]
XP_022965996.1	9.3e-58	88.28	multiprotein-bridging factor 1c [Cucurbita maxima] >XP_023537921.1 multiprotein-...	[more]
XP_022937454.1	2.7e-57	87.59	multiprotein-bridging factor 1c [Cucurbita moschata] >KAG6586426.1 Multiprotein-...	[more]
TYK10712.1	4.6e-57	86.90	multiprotein-bridging factor 1c [Cucumis melo var. makuwa]	[more]
XP_008458302.1	6.0e-57	86.90	PREDICTED: multiprotein-bridging factor 1c [Cucumis melo]	[more]

BLAST of MS011803 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LV58	1.3e-54	79.05	Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV...	[more]
Q9LXT3	9.1e-32	55.47	Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV...	[more]
Q9SJI8	1.5e-29	52.90	Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV...	[more]
Q6GPQ6	6.3e-17	43.94	Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 G...	[more]
Q5A940	1.1e-16	40.14	Multiprotein-bridging factor 1 OS=Candida albicans (strain SC5314 / ATCC MYA-287...	[more]

BLAST of MS011803 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HN61	4.5e-58	88.28	multiprotein-bridging factor 1c OS=Cucurbita maxima OX=3661 GN=LOC111465714 PE=4...	[more]
A0A6J1FB80	1.3e-57	87.59	multiprotein-bridging factor 1c OS=Cucurbita moschata OX=3662 GN=LOC111443860 PE...	[more]
A0A5D3CHG2	2.2e-57	86.90	Multiprotein-bridging factor 1c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7V2S1	2.9e-57	86.90	Multiprotein-bridging factor 1c OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A1S3C8T1	2.9e-57	86.90	multiprotein-bridging factor 1c OS=Cucumis melo OX=3656 GN=LOC103497758 PE=4 SV=...	[more]

BLAST of MS011803 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24500.1	9.3e-56	79.05	multiprotein bridging factor 1C	[more]
AT3G58680.1	6.5e-33	55.47	multiprotein bridging factor 1B	[more]
AT2G42680.1	1.0e-30	52.90	multiprotein bridging factor 1A	[more]
AT3G24500.2	1.8e-27	67.37	multiprotein bridging factor 1C	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..109
None	No IPR available	PANTHER	PTHR10245:SF71	MULTIPROTEIN-BRIDGING FACTOR 1C	coord: 1..143
None	No IPR available	PANTHER	PTHR10245	ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1	coord: 1..143
IPR001387	Cro/C1-type helix-turn-helix domain	SMART	SM00530	mbf_short4	coord: 86..141 e-value: 3.7E-13 score: 59.7
IPR001387	Cro/C1-type helix-turn-helix domain	PFAM	PF01381	HTH_3	coord: 87..138 e-value: 9.8E-14 score: 51.2
IPR001387	Cro/C1-type helix-turn-helix domain	PROSITE	PS50943	HTH_CROC1	coord: 87..141 score: 13.776644
IPR001387	Cro/C1-type helix-turn-helix domain	CDD	cd00093	HTH_XRE	coord: 86..138 e-value: 3.06977E-11 score: 53.3258
IPR013729	Multiprotein bridging factor 1, N-terminal	PFAM	PF08523	MBF1	coord: 11..79 e-value: 6.4E-19 score: 68.2
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	GENE3D	1.10.260.40		coord: 70..144 e-value: 1.7E-27 score: 96.7
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	SUPERFAMILY	47413	lambda repressor-like DNA-binding domains	coord: 84..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS011803.1	MS011803.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding