MS011800 (gene) Bitter gourd (TR) v1

Overview
NameMS011800
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold11: 813201 .. 813317 (-)
RNA-Seq ExpressionMS011800
SyntenyMS011800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGACGCGGTGCACCACACTAACATGGGGCCCTCATCAGCGCCGACGATCCAGCCGAAGGACCGCGTGGGACCCACTTCCAAACTGGCTATTGATTGTCGCTTTCTTAGCGTGG

mRNA sequence

ATGCGGACGCGGTGCACCACACTAACATGGGGCCCTCATCAGCGCCGACGATCCAGCCGAAGGACCGCGTGGGACCCACTTCCAAACTGGCTATTGATTGTCGCTTTCTTAGCGTGG

Coding sequence (CDS)

ATGCGGACGCGGTGCACCACACTAACATGGGGCCCTCATCAGCGCCGACGATCCAGCCGAAGGACCGCGTGGGACCCACTTCCAAACTGGCTATTGATTGTCGCTTTCTTAGCGTGG

Protein sequence

MRTRCTTLTWGPHQRRRSSRRTAWDPLPNWLLIVAFLAW
Homology
[Close]
BLAST of MS011800 vs. NCBI nr
Match: KGN60626.1 (hypothetical protein Csa_019193 [Cucumis sativus])

HSP 1 Score: 77.4 bits (189), Expect = 3.0e-11
Identity = 33/39 (84.62%), Postives = 36/39 (92.31%), Query Frame = 0 

Query: 1  MRTRCTTLTWGPHQRRRSSRRTAWDPLPNWLLIVAFLAW 40
          M TRCTT+TW PHQRRRSSRR AWDPLPNWLL+VAFLA+
Sbjct: 1  MWTRCTTITWAPHQRRRSSRRNAWDPLPNWLLVVAFLAF 39

[Close]
BLAST of MS011800 vs. ExPASy TrEMBL
Match: A0A0A0LKU6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004750 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-11
Identity = 33/39 (84.62%), Postives = 36/39 (92.31%), Query Frame = 0 

Query: 1  MRTRCTTLTWGPHQRRRSSRRTAWDPLPNWLLIVAFLAW 40
          M TRCTT+TW PHQRRRSSRR AWDPLPNWLL+VAFLA+
Sbjct: 1  MWTRCTTITWAPHQRRRSSRRNAWDPLPNWLLVVAFLAF 39

The following BLAST results are available for this feature:
BLAST of MS011800 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60626.13.0e-1184.62hypothetical protein Csa_019193 [Cucumis sativus][more]
BLAST of MS011800 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS011800 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKU61.5e-1184.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004750 PE=4 SV=1[more]
BLAST of MS011800 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS011800.1MS011800.1mRNA