MS011751 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCTTCCATTTTGAGCTCCCAAGGAATGGCCATGGCTTTGGCAACAGCCATGGCAGCTCTCTCTGGCACTCTCATCGTCCTCTCCCTCTGCCTCCATAAATCCCACCCCTCCATTTCTTCTGGTAAGCAATTTAATTTCTAAAAAACCCTACCAATAAAAGTTTCAATTTTGTTTAATAATTACTTACAGAAATCATTCATTTTTTGAGTTTTTTATTTTATTTTTTCTGAAGTGGGGAAGAAGAGAGAGACGACGGAGAAGAAGAAGAGGAGAAAAAGGGTTCACTTTGCAGAGGATGTGCCAATAAGTACTGAAGATTTGCAGAGAAAAAAAGGGTCGGTTTTTTTGTGTTCTTCGCCGCCGGCGACCGGAGCTCCGCCGCCGTGTTTGAAGCTGGAGAAGTGCCACGGCGGAATGCCGGCCAACAGGGTGGCGCTGTACAATGGAATCTTAAGGGATCGTTTGGTTCACAGAATGGCATATTCTCTT ATGTCTTCTTCCATTTTGAGCTCCCAAGGAATGGCCATGGCTTTGGCAACAGCCATGGCAGCTCTCTCTGGCACTCTCATCGTCCTCTCCCTCTGCCTCCATAAATCCCACCCCTCCATTTCTTCTGTGGGGAAGAAGAGAGAGACGACGGAGAAGAAGAAGAGGAGAAAAAGGGTTCACTTTGCAGAGGATGTGCCAATAAGTACTGAAGATTTGCAGAGAAAAAAAGGGTCGGTTTTTTTGTGTTCTTCGCCGCCGGCGACCGGAGCTCCGCCGCCGTGTTTGAAGCTGGAGAAGTGCCACGGCGGAATGCCGGCCAACAGGGTGGCGCTGTACAATGGAATCTTAAGGGATCGTTTGGTTCACAGAATGGCATATTCTCTT ATGTCTTCTTCCATTTTGAGCTCCCAAGGAATGGCCATGGCTTTGGCAACAGCCATGGCAGCTCTCTCTGGCACTCTCATCGTCCTCTCCCTCTGCCTCCATAAATCCCACCCCTCCATTTCTTCTGTGGGGAAGAAGAGAGAGACGACGGAGAAGAAGAAGAGGAGAAAAAGGGTTCACTTTGCAGAGGATGTGCCAATAAGTACTGAAGATTTGCAGAGAAAAAAAGGGTCGGTTTTTTTGTGTTCTTCGCCGCCGGCGACCGGAGCTCCGCCGCCGTGTTTGAAGCTGGAGAAGTGCCACGGCGGAATGCCGGCCAACAGGGTGGCGCTGTACAATGGAATCTTAAGGGATCGTTTGGTTCACAGAATGGCATATTCTCTT MSSSILSSQGMAMALATAMAALSGTLIVLSLCLHKSHPSISSVGKKRETTEKKKRRKRVHFAEDVPISTEDLQRKKGSVFLCSSPPATGAPPPCLKLEKCHGGMPANRVALYNGILRDRLVHRMAYSL Homology
BLAST of MS011751 vs. NCBI nr
Match: XP_022143219.1 (uncharacterized protein LOC111013136, partial [Momordica charantia]) HSP 1 Score: 178.7 bits (452), Expect = 3.2e-41 Identity = 96/99 (96.97%), Postives = 97/99 (97.98%), Query Frame = 0
BLAST of MS011751 vs. NCBI nr
Match: XP_038890799.1 (uncharacterized protein LOC120080255 [Benincasa hispida]) HSP 1 Score: 134.8 bits (338), Expect = 5.2e-28 Identity = 86/130 (66.15%), Postives = 94/130 (72.31%), Query Frame = 0
BLAST of MS011751 vs. NCBI nr
Match: XP_008457539.1 (PREDICTED: uncharacterized protein LOC103497202 [Cucumis melo]) HSP 1 Score: 122.9 bits (307), Expect = 2.1e-24 Identity = 77/129 (59.69%), Postives = 90/129 (69.77%), Query Frame = 0
BLAST of MS011751 vs. NCBI nr
Match: KGN60682.1 (hypothetical protein Csa_019276 [Cucumis sativus]) HSP 1 Score: 122.1 bits (305), Expect = 3.5e-24 Identity = 79/131 (60.31%), Postives = 95/131 (72.52%), Query Frame = 0
BLAST of MS011751 vs. NCBI nr
Match: XP_022946911.1 (uncharacterized protein LOC111450851 isoform X2 [Cucurbita moschata]) HSP 1 Score: 108.6 bits (270), Expect = 4.0e-20 Identity = 74/117 (63.25%), Postives = 82/117 (70.09%), Query Frame = 0
BLAST of MS011751 vs. ExPASy TrEMBL
Match: A0A6J1CNP2 (uncharacterized protein LOC111013136 OS=Momordica charantia OX=3673 GN=LOC111013136 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 1.5e-41 Identity = 96/99 (96.97%), Postives = 97/99 (97.98%), Query Frame = 0
BLAST of MS011751 vs. ExPASy TrEMBL
Match: A0A1S3C5Q6 (uncharacterized protein LOC103497202 OS=Cucumis melo OX=3656 GN=LOC103497202 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 1.0e-24 Identity = 77/129 (59.69%), Postives = 90/129 (69.77%), Query Frame = 0
BLAST of MS011751 vs. ExPASy TrEMBL
Match: A0A0A0LIY8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006280 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.7e-24 Identity = 79/131 (60.31%), Postives = 95/131 (72.52%), Query Frame = 0
BLAST of MS011751 vs. ExPASy TrEMBL
Match: A0A6J1G4X1 (uncharacterized protein LOC111450851 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450851 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.9e-20 Identity = 74/117 (63.25%), Postives = 82/117 (70.09%), Query Frame = 0
BLAST of MS011751 vs. ExPASy TrEMBL
Match: A0A6J1HCR8 (uncharacterized protein LOC111461643 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461643 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 9.6e-20 Identity = 68/133 (51.13%), Postives = 88/133 (66.17%), Query Frame = 0
BLAST of MS011751 vs. TAIR 10
Match: AT1G52565.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 41.2 bits (95), Expect = 7.3e-04 Identity = 39/120 (32.50%), Postives = 58/120 (48.33%), Query Frame = 0
BLAST of MS011751 vs. TAIR 10
Match: AT3G15760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 41.2 bits (95), Expect = 7.3e-04 Identity = 45/140 (32.14%), Postives = 64/140 (45.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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