MS011751 (gene) Bitter gourd (TR) v1

Overview
NameMS011751
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCytochrome P450 family protein
Locationscaffold11: 411974 .. 412468 (-)
RNA-Seq ExpressionMS011751
SyntenyMS011751
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCTTCCATTTTGAGCTCCCAAGGAATGGCCATGGCTTTGGCAACAGCCATGGCAGCTCTCTCTGGCACTCTCATCGTCCTCTCCCTCTGCCTCCATAAATCCCACCCCTCCATTTCTTCTGGTAAGCAATTTAATTTCTAAAAAACCCTACCAATAAAAGTTTCAATTTTGTTTAATAATTACTTACAGAAATCATTCATTTTTTGAGTTTTTTATTTTATTTTTTCTGAAGTGGGGAAGAAGAGAGAGACGACGGAGAAGAAGAAGAGGAGAAAAAGGGTTCACTTTGCAGAGGATGTGCCAATAAGTACTGAAGATTTGCAGAGAAAAAAAGGGTCGGTTTTTTTGTGTTCTTCGCCGCCGGCGACCGGAGCTCCGCCGCCGTGTTTGAAGCTGGAGAAGTGCCACGGCGGAATGCCGGCCAACAGGGTGGCGCTGTACAATGGAATCTTAAGGGATCGTTTGGTTCACAGAATGGCATATTCTCTT

mRNA sequence

ATGTCTTCTTCCATTTTGAGCTCCCAAGGAATGGCCATGGCTTTGGCAACAGCCATGGCAGCTCTCTCTGGCACTCTCATCGTCCTCTCCCTCTGCCTCCATAAATCCCACCCCTCCATTTCTTCTGTGGGGAAGAAGAGAGAGACGACGGAGAAGAAGAAGAGGAGAAAAAGGGTTCACTTTGCAGAGGATGTGCCAATAAGTACTGAAGATTTGCAGAGAAAAAAAGGGTCGGTTTTTTTGTGTTCTTCGCCGCCGGCGACCGGAGCTCCGCCGCCGTGTTTGAAGCTGGAGAAGTGCCACGGCGGAATGCCGGCCAACAGGGTGGCGCTGTACAATGGAATCTTAAGGGATCGTTTGGTTCACAGAATGGCATATTCTCTT

Coding sequence (CDS)

ATGTCTTCTTCCATTTTGAGCTCCCAAGGAATGGCCATGGCTTTGGCAACAGCCATGGCAGCTCTCTCTGGCACTCTCATCGTCCTCTCCCTCTGCCTCCATAAATCCCACCCCTCCATTTCTTCTGTGGGGAAGAAGAGAGAGACGACGGAGAAGAAGAAGAGGAGAAAAAGGGTTCACTTTGCAGAGGATGTGCCAATAAGTACTGAAGATTTGCAGAGAAAAAAAGGGTCGGTTTTTTTGTGTTCTTCGCCGCCGGCGACCGGAGCTCCGCCGCCGTGTTTGAAGCTGGAGAAGTGCCACGGCGGAATGCCGGCCAACAGGGTGGCGCTGTACAATGGAATCTTAAGGGATCGTTTGGTTCACAGAATGGCATATTCTCTT

Protein sequence

MSSSILSSQGMAMALATAMAALSGTLIVLSLCLHKSHPSISSVGKKRETTEKKKRRKRVHFAEDVPISTEDLQRKKGSVFLCSSPPATGAPPPCLKLEKCHGGMPANRVALYNGILRDRLVHRMAYSL
Homology
BLAST of MS011751 vs. NCBI nr
Match: XP_022143219.1 (uncharacterized protein LOC111013136, partial [Momordica charantia])

HSP 1 Score: 178.7 bits (452), Expect = 3.2e-41
Identity = 96/99 (96.97%), Postives = 97/99 (97.98%), Query Frame = 0

Query: 1   MSSSILSSQGMAMALATAMAALSGTLIVLSLCLHKSHPSISSVGKKRETTEKKKRRKRVH 60
           MSSSILSSQGMAMALATAMAALSGTLIVLSLCLHKSH SISSVGKKRETTEKKKRRKRVH
Sbjct: 1   MSSSILSSQGMAMALATAMAALSGTLIVLSLCLHKSHSSISSVGKKRETTEKKKRRKRVH 60

Query: 61  FAEDVPISTEDLQRKKGSVFLCSSPPATGAPPPCLKLEK 100
           FAEDVP STEDL+RKKGSVFLCSSPPATGAPPPCLKLEK
Sbjct: 61  FAEDVPTSTEDLRRKKGSVFLCSSPPATGAPPPCLKLEK 99

BLAST of MS011751 vs. NCBI nr
Match: XP_038890799.1 (uncharacterized protein LOC120080255 [Benincasa hispida])

HSP 1 Score: 134.8 bits (338), Expect = 5.2e-28
Identity = 86/130 (66.15%), Postives = 94/130 (72.31%), Query Frame = 0

Query: 1   MSSSILSSQGMAMALATAMAALSGTLIV-LSLCLHKSHPSISSVGKKRETTEKKKRRKRV 60
           MSSSILSSQ MAM    A AALSGT+IV LS CLHKS PSISSV KK+E  +KKK RKRV
Sbjct: 1   MSSSILSSQSMAM----AFAALSGTVIVILSFCLHKSDPSISSVVKKKEMEKKKKGRKRV 60

Query: 61  HFAEDVPI-STEDLQRKKGSVFLCSSPPATGAPPPCLKLEKCHGGMPANRVALYNGILRD 120
           HFA+D+ I  TE+LQ KKG +   S PP  G            GGMPANRVALYNGILRD
Sbjct: 61  HFADDLAIFGTEELQIKKGLILGSSPPPGRGPARRLTSTGGGGGGMPANRVALYNGILRD 120

Query: 121 RLVHRMAYSL 129
           RLVHR+AYSL
Sbjct: 121 RLVHRIAYSL 126

BLAST of MS011751 vs. NCBI nr
Match: XP_008457539.1 (PREDICTED: uncharacterized protein LOC103497202 [Cucumis melo])

HSP 1 Score: 122.9 bits (307), Expect = 2.1e-24
Identity = 77/129 (59.69%), Postives = 90/129 (69.77%), Query Frame = 0

Query: 2   SSSILSSQGMAMALATAMAALSGTLIVLSLCLHKSHPSISSVGKKRETTEKKKRRKRVHF 61
           SSSILSSQ MAMA A   A     ++VLSL LHKSHPSISSV +K+E  +KKK RKRVHF
Sbjct: 3   SSSILSSQSMAMAFAALSAGT--VIVVLSLYLHKSHPSISSVVEKKEMEKKKKGRKRVHF 62

Query: 62  AEDVPI--STEDLQRKKGSVFLCSSPPATGAPPPCLKLEKCHGGMPANRVALYNGILRDR 121
           ++D+ I  STE+L+RKK  +   S  P   A     +     GGMPANR ALYNGILRDR
Sbjct: 63  SDDLAIFSSTEELKRKKDMILGSSPSPGRAAARRLTRNGGGGGGMPANRAALYNGILRDR 122

Query: 122 LVHRMAYSL 129
           LVHR+AYSL
Sbjct: 123 LVHRIAYSL 129

BLAST of MS011751 vs. NCBI nr
Match: KGN60682.1 (hypothetical protein Csa_019276 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 3.5e-24
Identity = 79/131 (60.31%), Postives = 95/131 (72.52%), Query Frame = 0

Query: 1   MSSSILSSQGMAMALATAMAALSGTLIVLSLCLHKSHPSISSVGKKRETTEKKKRRKRVH 60
           MSSSILSSQ MAMA A  +      ++VLS  LHKSHPSISSV KK+E  +KKK RK+VH
Sbjct: 1   MSSSILSSQSMAMAFAGTV------IVVLSFYLHKSHPSISSVMKKKEKEKKKKGRKKVH 60

Query: 61  FAEDVPI--STEDLQRKKGSVFLCSSPPATGAPP-PCLKLEKCHGGMPANRVALYNGILR 120
           F++D+ I  ST+DL+RKK  + L SSPP+  AP  P        GG+PANR ALYNGILR
Sbjct: 61  FSDDLAIFSSTKDLKRKK-DMMLGSSPPSGRAPARPLTTSGGGGGGLPANRAALYNGILR 120

Query: 121 DRLVHRMAYSL 129
           +RLVHR+AYSL
Sbjct: 121 NRLVHRIAYSL 124

BLAST of MS011751 vs. NCBI nr
Match: XP_022946911.1 (uncharacterized protein LOC111450851 isoform X2 [Cucurbita moschata])

HSP 1 Score: 108.6 bits (270), Expect = 4.0e-20
Identity = 74/117 (63.25%), Postives = 82/117 (70.09%), Query Frame = 0

Query: 15  LATAMAALSGTL-IVLSLCLHKSHPSISSVGKKRETTEKKKRRKRVHFAEDVPI-STEDL 74
           +A AMAALSG + +VLS    KS  S+SSV KK     KKK RKRVHFA+D  + STE+L
Sbjct: 1   MAMAMAALSGAVAVVLSFRHRKSAASVSSVVKK-----KKKGRKRVHFADDSAVCSTEEL 60

Query: 75  QRKKGSVFLCSSPPATGAPPPCLKLEKCHG-GMPANRVALYNGILRDRLVHRMAYSL 129
           QRK G + L  SPP   APPP L      G GMPANRVALYNGILRDRLVHRMAYSL
Sbjct: 61  QRKNG-LILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDRLVHRMAYSL 111

BLAST of MS011751 vs. ExPASy TrEMBL
Match: A0A6J1CNP2 (uncharacterized protein LOC111013136 OS=Momordica charantia OX=3673 GN=LOC111013136 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.5e-41
Identity = 96/99 (96.97%), Postives = 97/99 (97.98%), Query Frame = 0

Query: 1   MSSSILSSQGMAMALATAMAALSGTLIVLSLCLHKSHPSISSVGKKRETTEKKKRRKRVH 60
           MSSSILSSQGMAMALATAMAALSGTLIVLSLCLHKSH SISSVGKKRETTEKKKRRKRVH
Sbjct: 1   MSSSILSSQGMAMALATAMAALSGTLIVLSLCLHKSHSSISSVGKKRETTEKKKRRKRVH 60

Query: 61  FAEDVPISTEDLQRKKGSVFLCSSPPATGAPPPCLKLEK 100
           FAEDVP STEDL+RKKGSVFLCSSPPATGAPPPCLKLEK
Sbjct: 61  FAEDVPTSTEDLRRKKGSVFLCSSPPATGAPPPCLKLEK 99

BLAST of MS011751 vs. ExPASy TrEMBL
Match: A0A1S3C5Q6 (uncharacterized protein LOC103497202 OS=Cucumis melo OX=3656 GN=LOC103497202 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.0e-24
Identity = 77/129 (59.69%), Postives = 90/129 (69.77%), Query Frame = 0

Query: 2   SSSILSSQGMAMALATAMAALSGTLIVLSLCLHKSHPSISSVGKKRETTEKKKRRKRVHF 61
           SSSILSSQ MAMA A   A     ++VLSL LHKSHPSISSV +K+E  +KKK RKRVHF
Sbjct: 3   SSSILSSQSMAMAFAALSAGT--VIVVLSLYLHKSHPSISSVVEKKEMEKKKKGRKRVHF 62

Query: 62  AEDVPI--STEDLQRKKGSVFLCSSPPATGAPPPCLKLEKCHGGMPANRVALYNGILRDR 121
           ++D+ I  STE+L+RKK  +   S  P   A     +     GGMPANR ALYNGILRDR
Sbjct: 63  SDDLAIFSSTEELKRKKDMILGSSPSPGRAAARRLTRNGGGGGGMPANRAALYNGILRDR 122

Query: 122 LVHRMAYSL 129
           LVHR+AYSL
Sbjct: 123 LVHRIAYSL 129

BLAST of MS011751 vs. ExPASy TrEMBL
Match: A0A0A0LIY8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006280 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.7e-24
Identity = 79/131 (60.31%), Postives = 95/131 (72.52%), Query Frame = 0

Query: 1   MSSSILSSQGMAMALATAMAALSGTLIVLSLCLHKSHPSISSVGKKRETTEKKKRRKRVH 60
           MSSSILSSQ MAMA A  +      ++VLS  LHKSHPSISSV KK+E  +KKK RK+VH
Sbjct: 1   MSSSILSSQSMAMAFAGTV------IVVLSFYLHKSHPSISSVMKKKEKEKKKKGRKKVH 60

Query: 61  FAEDVPI--STEDLQRKKGSVFLCSSPPATGAPP-PCLKLEKCHGGMPANRVALYNGILR 120
           F++D+ I  ST+DL+RKK  + L SSPP+  AP  P        GG+PANR ALYNGILR
Sbjct: 61  FSDDLAIFSSTKDLKRKK-DMMLGSSPPSGRAPARPLTTSGGGGGGLPANRAALYNGILR 120

Query: 121 DRLVHRMAYSL 129
           +RLVHR+AYSL
Sbjct: 121 NRLVHRIAYSL 124

BLAST of MS011751 vs. ExPASy TrEMBL
Match: A0A6J1G4X1 (uncharacterized protein LOC111450851 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450851 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.9e-20
Identity = 74/117 (63.25%), Postives = 82/117 (70.09%), Query Frame = 0

Query: 15  LATAMAALSGTL-IVLSLCLHKSHPSISSVGKKRETTEKKKRRKRVHFAEDVPI-STEDL 74
           +A AMAALSG + +VLS    KS  S+SSV KK     KKK RKRVHFA+D  + STE+L
Sbjct: 1   MAMAMAALSGAVAVVLSFRHRKSAASVSSVVKK-----KKKGRKRVHFADDSAVCSTEEL 60

Query: 75  QRKKGSVFLCSSPPATGAPPPCLKLEKCHG-GMPANRVALYNGILRDRLVHRMAYSL 129
           QRK G + L  SPP   APPP L      G GMPANRVALYNGILRDRLVHRMAYSL
Sbjct: 61  QRKNG-LILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDRLVHRMAYSL 111

BLAST of MS011751 vs. ExPASy TrEMBL
Match: A0A6J1HCR8 (uncharacterized protein LOC111461643 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461643 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 9.6e-20
Identity = 68/133 (51.13%), Postives = 88/133 (66.17%), Query Frame = 0

Query: 3   SSILSSQGMAMALATAMAALSGTLIVLSLCLHKS------HPSISSVGKKRETTEKKKRR 62
           SS ++SQGMA+A+ATAMAA+SGT+I+LS C+ KS       PS+ S     +T + KK+ 
Sbjct: 2   SSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPSSDTKKTKKKN 61

Query: 63  KRVHFAEDV--PISTEDLQRKKGSVFLCSSPPATGAPPPCLKLEKCHGGMPANRVALYNG 122
           KRVHFA+DV  PI   D  R++  +  C++  +  A PP         GMPANRVALYNG
Sbjct: 62  KRVHFAKDVVDPIGNGDDFRRQHEL-ACNNNNSNTASPPSQNPPTAPRGMPANRVALYNG 121

Query: 123 ILRDRLVHRMAYS 128
           ILRDR+VHR AYS
Sbjct: 122 ILRDRVVHRYAYS 133

BLAST of MS011751 vs. TAIR 10
Match: AT1G52565.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 7.3e-04
Identity = 39/120 (32.50%), Postives = 58/120 (48.33%), Query Frame = 0

Query: 13  MALATAMAALSGTLIVLSLCLHKSHPSISS-------VGKKRETTEKKKRRKRVHFAEDV 72
           + +ATAM   S T + L++    S    S        +  + +  ++K ++K+V FAE+V
Sbjct: 11  VVIATAM-VFSSTALFLAISRQFSGNQTSDQQILRSCLSSEEKKKQRKNKKKKVKFAENV 70

Query: 73  PIS--TEDLQRKKGSVFLCSSPPATGAPPPCLKLEK----CHGGMPANRVALYNGILRDR 120
             +    +  RKK    +         P   +K EK    C   MPANR+ALYNGILRDR
Sbjct: 71  KETKGNGEEYRKKSLRRI--------VPEQMIKPEKTGSVCRNDMPANRIALYNGILRDR 121

BLAST of MS011751 vs. TAIR 10
Match: AT3G15760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 7.3e-04
Identity = 45/140 (32.14%), Postives = 64/140 (45.71%), Query Frame = 0

Query: 5   ILSSQGMAMALATAMAALSGTL-IVLSLCLHKSH-----------PSISSVGKKRETTEK 64
           +LS     + +ATAM   S  L + ++   H +H           P + S     ET ++
Sbjct: 1   MLSCSNGTVVIATAMVCSSTALFLAMARQFHGNHQNPKVLDQTLRPILRSCLSSEETKKQ 60

Query: 65  KKRRKRVHFAEDVPISTEDLQRKKGSVFLCSSPPATGAPPPCLKLEK----CH-GGMPAN 124
            K+ K+V FA++V  +     +  G  +          P P  K  K    C    MPAN
Sbjct: 61  GKKIKKVRFADNVKDT-----KGNGEEYRRRELNRKSVPKPVTKPGKTGSMCRISTMPAN 120

Query: 125 RVALYNGILRDRLVHRMAYS 128
           R+ALYNGILRDR  HR+ YS
Sbjct: 121 RMALYNGILRDR-DHRVQYS 134

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022143219.13.2e-4196.97uncharacterized protein LOC111013136, partial [Momordica charantia][more]
XP_038890799.15.2e-2866.15uncharacterized protein LOC120080255 [Benincasa hispida][more]
XP_008457539.12.1e-2459.69PREDICTED: uncharacterized protein LOC103497202 [Cucumis melo][more]
KGN60682.13.5e-2460.31hypothetical protein Csa_019276 [Cucumis sativus][more]
XP_022946911.14.0e-2063.25uncharacterized protein LOC111450851 isoform X2 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CNP21.5e-4196.97uncharacterized protein LOC111013136 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A1S3C5Q61.0e-2459.69uncharacterized protein LOC103497202 OS=Cucumis melo OX=3656 GN=LOC103497202 PE=... [more]
A0A0A0LIY81.7e-2460.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006280 PE=4 SV=1[more]
A0A6J1G4X11.9e-2063.25uncharacterized protein LOC111450851 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1HCR89.6e-2051.13uncharacterized protein LOC111461643 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
Match NameE-valueIdentityDescription
AT1G52565.17.3e-0432.50unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G15760.17.3e-0432.14unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..62
NoneNo IPR availablePANTHERPTHR33564:SF11OS06G0604600 PROTEINcoord: 3..127
NoneNo IPR availablePANTHERPTHR33564TRANSMEMBRANE PROTEINcoord: 3..127

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS011751.1MS011751.1mRNA