MS011747 (gene) Bitter gourd (TR) v1

Overview


Name	MS011747
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	axial regulator YABBY 5-like
Location	scaffold11: 376221 .. 379294 (+)
RNA-Seq Expression	MS011747
Synteny	MS011747

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAGCTGCATCAATAGTCAGCAGGAGCAACTCTGCTACATCCCTTGCAATTTTTGCAATATTGTTCTTGCGGTATATATCCTCCACTACAGAGAGAGATCTGGTTTTTTATGCTTAGTTTTTTAATTTTATGTCTATGTTTTTTCTTTTGTTTTTCAAATCTCCCCAAAAAGCCCATTTCCTTGCTTCTCTATTTGAGTAATTTTACTTTCTGGGTTTTTGTTTTCCATTCTAAGCAAGGCCATTCTCTTGAGCTCCATGAGAGAGAGAAGAGAGGGAGTTTCTTTTCGGTTTTGTTGTGAAAATTCGAACCCCTAATCTCAAAAATGTTTCTAATGTCTTAATTGATTAAGTTATGTTCGGGCCGAGAAGGGTATAGGGATCTTAGTTCATGCATTTCTCTAAAAAAAAACCATTTTTCCACTAGGGTTTTTAATTTTTTGTTTGTTTGTTTAATTTTACCCACTAGGGTTGAATCTTAGTGATGTATGGAGAAAATTAACATCTGGATTCTCTTAATTTTGCTGTTTTTGTGCACTCTCTGATCCTTATTTCTTCAGAAAAGTATTTAATTGATGAGATTTTTCATCACACAGGTGAGTGTTCCATGCAGCAATCTGTTTGACATCGTGACCGTCCGATGTGGTCACTGCAGCAATCTGTGGTCTGTGAATATGGCCGCCGCTTTCCAGTCTCTCTCATGGCCAAATTCTCAGGTTAAATTTCAAAGATTCTATTTTTATTTTTTATTTTATTTTATTTTTCTTTTTCCTTCCACCTTAATTTTAGGGAGAGAGATCTCGAATGTCTGAAGCTCAGCAGCGGCCTTGGCGGGGGAAAATAACCTAAATTGTTTTTTAAAAAAAATTCAACCTTTTTTAATTTTTTTCTTCTGGGTGTGTTTGTTTTCTGATATACTGTTGAAATTATAATAAATGCTTTTGGGAAAAAAAACATGTTTTTGACTGATTTCCAACATGGGTTGAAACCAGTGAGAGAAACGGAAAACCCTAGACGGTGGTGCGGCGGCGGTGGCGGCGGTGGCAGCAGCCGCCGCCGCCATAACCCGTAACCTATTTTGTGCATCTTTTTGTAGAAGGGAGTCAGGAGCTGTCTAGTGGAATCAGAACTAGGCATTTTCTTTCTTTTGGTTTTCTCCCAAGAAATTTTTTTTCAAACTTTGAGCCACTTTTCTTCTCTTTTTTCTTTCTTTTTTCTCCTCACATTTATTTATGTGTGTGTGTGTATATATATATATATACATATATTTGGTTGATTTGATTGATTTGTTGTTGGTTTAGGGCTCTTAGGTATGAATCTCTCACGTCTTTTCCAAAGCTTTTGTCTTCTACTGTTGAAACCAATAGATCAATGAACTGATGGTTTTTCATCTCTTCTCTTGGATTTTTGCACCCCCTTTTTCCAGTTCTCCTCATATTTCTAATGTTTTTCCATTCAATTTCAACCTCTCCCCCCATCTTTCTCTCTCTGGAAAATAATTCTCTCTCTCTAAATATCCTAATTTAAGCATCCCCTACCTAATTCAATTGTTTTTATTCTAATTTAAACATAATTCAATGATTAAGCATTCAAAACGACCTAGATCTGTTTATGATGAATCTCTCCCACTTTCTTTCTAAAACCTTATTTTGTTTTTGATTTTCTGAAAGTTACAAAACCCATCAAGCCAAAATATATATTATGAAATGGGTTTAAGCGTTTAATACACATCTCTCTAGTTAATTCGATCTGAATCTGTCTTTTTTTATCTCTTTGAAAAAAATACAAAATCTTAGGGATCAGGCCACACCCACAGCCACGGTGGGAGTGCAGCTGATTACAGGGTTGAATTGGGCTCATCGTCAAAATGCAACAACAAGATGAAGATGAGAGCAACAATTAAAAACCCTACAACTGATCCTGATCAAAGGGTCATCAACCGACGTAAGTTATATAATTCATAAATATTGATATGATATCAGAGTCCAACAAACAATCGATCCAAAAAAAGATGCAAGATTATATTATGAAGATACATGATAAGAGACGTAACAAAAATTTATAATATATATGAGATATTCCTCTTCTAGCCCATTAATTTTGAAAGAAACCTATCCATATTAATATATACATATATATAAATTAAAAAATATTTGATTTAATTTAATTTGTCACCTGAGTTGTTATTTTCTTTTTTCAGCTCCCGAGAAGAGGCAGAGAGTACCTTCTGCATATAACCAGTTTATAAAGTAAGGAAAAAAAAAATTAAATATGGATTTTGGTTTCTCTCTCTCTTTCCCTCTGTTTTATTTATTTATTCAAGATAATAAAAAAATGAAAAAAGAAAAAATATTTTTCATGGGTCATTTCTCCTTTTGCGTTTGAAACCTGACAAAATTACCTAAAATTCAGAGAGGAAATCCAGAGGATCAAAGCAAAAAATCCAGATATTACCCACAGGGAAGCATTCAGTACTGCTGCTAAAAATGTAAGTACAACACATTTAATTTCTCTTTTTCATACCAATTTTTATTTTTTTTTAACTATTGTTTATTACAAAGGGATTCTCAATTTCGTTTGTATCACAGAAAATATTACAATCTTTTGGGTATTCTATTGACTTCTTGCTAATTTTCTTTCTGCAATTGGCAGTGGGCACATTTCCCACATATTCATTTTGGCCTCATGCTTGAAACCAACAATCTGCAGACCAAAAATGATGTAAGTATAAATGGTAATTATATCCACCATTTTAAAAAATACTTACTTTTGATTATCATTTATTTCCATTTGTTCGGTTTTCTGCAAATTTCTAAACCTACCAGTAATGTTAAGATATTCAATAAGTGAATTAAACTTTGTCTACGATTAGTTTCAAGTTTCAGAGGCCTATCTATTTAGGAATTCTTCGCAAGAATACGAGTAAACACAATGGTTGTCAGAAAGGGCTTTATGAAAAGGGTTTATTATTTTGAATGGTTGAAGCATTTAATTGATTTTTTATTTGGTTTTTATTAATTGCTTGACAGGGATCTGAGAAGCATCTGATGTCAGTGCCAGGGCTGCACTAT

mRNA sequence

ATGTCGAGCTGCATCAATAGTCAGCAGGAGCAACTCTGCTACATCCCTTGCAATTTTTGCAATATTGTTCTTGCGGTGAGTGTTCCATGCAGCAATCTGTTTGACATCGTGACCGTCCGATGTGGTCACTGCAGCAATCTGTGGTCTGTGAATATGGCCGCCGCTTTCCAGTCTCTCTCATGGCCAAATTCTCAGGGATCAGGCCACACCCACAGCCACGGTGGGAGTGCAGCTGATTACAGGGTTGAATTGGGCTCATCGTCAAAATGCAACAACAAGATGAAGATGAGAGCAACAATTAAAAACCCTACAACTGATCCTGATCAAAGGGTCATCAACCGACCTCCCGAGAAGAGGCAGAGAGTACCTTCTGCATATAACCAGTTTATAAAAGAGGAAATCCAGAGGATCAAAGCAAAAAATCCAGATATTACCCACAGGGAAGCATTCAGTACTGCTGCTAAAAATTGGGCACATTTCCCACATATTCATTTTGGCCTCATGCTTGAAACCAACAATCTGCAGACCAAAAATGATGGATCTGAGAAGCATCTGATGTCAGTGCCAGGGCTGCACTAT

Coding sequence (CDS)

ATGTCGAGCTGCATCAATAGTCAGCAGGAGCAACTCTGCTACATCCCTTGCAATTTTTGCAATATTGTTCTTGCGGTGAGTGTTCCATGCAGCAATCTGTTTGACATCGTGACCGTCCGATGTGGTCACTGCAGCAATCTGTGGTCTGTGAATATGGCCGCCGCTTTCCAGTCTCTCTCATGGCCAAATTCTCAGGGATCAGGCCACACCCACAGCCACGGTGGGAGTGCAGCTGATTACAGGGTTGAATTGGGCTCATCGTCAAAATGCAACAACAAGATGAAGATGAGAGCAACAATTAAAAACCCTACAACTGATCCTGATCAAAGGGTCATCAACCGACCTCCCGAGAAGAGGCAGAGAGTACCTTCTGCATATAACCAGTTTATAAAAGAGGAAATCCAGAGGATCAAAGCAAAAAATCCAGATATTACCCACAGGGAAGCATTCAGTACTGCTGCTAAAAATTGGGCACATTTCCCACATATTCATTTTGGCCTCATGCTTGAAACCAACAATCTGCAGACCAAAAATGATGGATCTGAGAAGCATCTGATGTCAGTGCCAGGGCTGCACTAT

Protein sequence

MSSCINSQQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLSWPNSQGSGHTHSHGGSAADYRVELGSSSKCNNKMKMRATIKNPTTDPDQRVINRPPEKRQRVPSAYNQFIKEEIQRIKAKNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQTKNDGSEKHLMSVPGLHY

Homology

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BLAST of MS011747 vs. NCBI nr
Match: XP_038889668.1 (axial regulator YABBY 5-like [Benincasa hispida])

HSP 1 Score: 352.8 bits (904), Expect = 1.8e-93
Identity = 176/197 (89.34%), Postives = 179/197 (90.86%), Query Frame = 0


Query: 1   MSSCINSQQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MSSCINS QEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLS
Sbjct: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLS 60

Query: 61  WPNSQGSGHTHSHGGSAADYRVELGSSSKCNNKMKMRATIKNPTTDPDQRVINRPPEKRQ 120
           W NSQ S H+HS G  A  YRVELGSSSKCNNKMKMRA IKN T D DQR+INRPPEKRQ
Sbjct: 61  WQNSQASNHSHS-GSGADHYRVELGSSSKCNNKMKMRAPIKNSTNDHDQRIINRPPEKRQ 120

Query: 121 RVPSAYNQFIKEEIQRIKAKNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQTKND- 180
           RVPSAYNQFIKEEIQRIKA NPDITHREAFSTAAKNWAHFPHIHFGLML+TNNLQTKND 
Sbjct: 121 RVPSAYNQFIKEEIQRIKATNPDITHREAFSTAAKNWAHFPHIHFGLMLDTNNLQTKNDA 180

Query: 181 ---GSEKHLMSVPGLHY 194
              GSEKHLMSVPGLHY
Sbjct: 181 SNMGSEKHLMSVPGLHY 196

[Close]

BLAST of MS011747 vs. NCBI nr
Match: XP_004139305.1 (axial regulator YABBY 5 isoform X1 [Cucumis sativus] >KGN60707.2 hypothetical protein Csa_019451 [Cucumis sativus])

HSP 1 Score: 349.4 bits (895), Expect = 2.0e-92
Identity = 172/193 (89.12%), Postives = 177/193 (91.71%), Query Frame = 0


Query: 1   MSSCINSQQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MSSCI+S QEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLS
Sbjct: 1   MSSCISSAQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLS 60

Query: 61  WPNSQGSGHTHSHGGSAADYRVELGSSSKCNNKMKMRATIKNPTTDPDQRVINRPPEKRQ 120
           W NSQ S H+HS G     YRVELGSSSK NNKMKMRA IKNPT D DQR+INRPPEKRQ
Sbjct: 61  WQNSQASNHSHS-GSGGDHYRVELGSSSKANNKMKMRAPIKNPTNDHDQRLINRPPEKRQ 120

Query: 121 RVPSAYNQFIKEEIQRIKAKNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQTKNDG 180
           RVPSAYNQFIKEEIQRIKA NPDITHREAFSTAAKNWAHFPHIHFGLML+TNNLQ+KNDG
Sbjct: 121 RVPSAYNQFIKEEIQRIKATNPDITHREAFSTAAKNWAHFPHIHFGLMLDTNNLQSKNDG 180

Query: 181 SEKHLMSVPGLHY 194
           SEKHLMSV GLHY
Sbjct: 181 SEKHLMSVSGLHY 192

[Close]

BLAST of MS011747 vs. NCBI nr
Match: XP_022946075.1 (axial regulator YABBY 5-like [Cucurbita moschata])

HSP 1 Score: 346.7 bits (888), Expect = 1.3e-91
Identity = 175/196 (89.29%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 1   MSSCINSQQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MSSCINS QEQLCYIPCNFCNIVLAVSVPCSN+FDIVTVRCGHCSNLWSVNMAAAFQSLS
Sbjct: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNIFDIVTVRCGHCSNLWSVNMAAAFQSLS 60

Query: 61  WPNSQGSGHTHSHGGSAAD-YRVELGSSSKCNNKMKMRATIKNPTTDPDQRVINRPPEKR 120
           W NSQ S HTHS  G AAD YR ELGSSSKCNNKMKMRA I+NPT + DQR+INR PEK+
Sbjct: 61  WQNSQASNHTHS--GLAADHYRAELGSSSKCNNKMKMRAPIRNPTNE-DQRIINRAPEKK 120

Query: 121 QRVPSAYNQFIKEEIQRIKAKNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQ--TK 180
           QRVPSAYNQFIKEEIQRIKA NPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQ  TK
Sbjct: 121 QRVPSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQAKTK 180

Query: 181 NDGSEKHLMSVPGLHY 194
           NDGSEKHLMSVPGLHY
Sbjct: 181 NDGSEKHLMSVPGLHY 193

[Close]

BLAST of MS011747 vs. NCBI nr
Match: XP_022999176.1 (axial regulator YABBY 5-like [Cucurbita maxima])

HSP 1 Score: 346.3 bits (887), Expect = 1.7e-91
Identity = 175/196 (89.29%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 1   MSSCINSQQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MSSCINS QEQLCYIPCNFCNIVLAVSVPCSN+FDIVTVRCGHCSNLWSVNMAAAFQSLS
Sbjct: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNIFDIVTVRCGHCSNLWSVNMAAAFQSLS 60

Query: 61  WPNSQGSGHTHSHGGSAAD-YRVELGSSSKCNNKMKMRATIKNPTTDPDQRVINRPPEKR 120
           W NSQ S HTHS  G AAD YR ELGSSSKCNNKMKMRA I+NPT D DQR+INR PEK+
Sbjct: 61  WQNSQASNHTHS--GLAADHYRAELGSSSKCNNKMKMRAPIRNPTND-DQRIINRAPEKK 120

Query: 121 QRVPSAYNQFIKEEIQRIKAKNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQ--TK 180
           QRVPSAYNQFIKEEIQRIKA NPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQ  TK
Sbjct: 121 QRVPSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQTKTK 180

Query: 181 NDGSEKHLMSVPGLHY 194
           +DGSEKHLMSVPGLHY
Sbjct: 181 SDGSEKHLMSVPGLHY 193

[Close]

BLAST of MS011747 vs. NCBI nr
Match: XP_023545856.1 (axial regulator YABBY 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345.9 bits (886), Expect = 2.3e-91
Identity = 175/196 (89.29%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 1   MSSCINSQQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MSSCINS QEQLCYIPCNFCNIVLAVSVPCSN+FDIVTVRCGHCSNLWSVNMAAAFQSLS
Sbjct: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNIFDIVTVRCGHCSNLWSVNMAAAFQSLS 60

Query: 61  WPNSQGSGHTHSHGGSAAD-YRVELGSSSKCNNKMKMRATIKNPTTDPDQRVINRPPEKR 120
           W NSQ S HT+S  G AAD YR ELGSSSKCNNKMKMRA I+NPT D DQR+INR PEK+
Sbjct: 61  WQNSQASNHTYS--GLAADHYRAELGSSSKCNNKMKMRAPIRNPTND-DQRIINRAPEKK 120

Query: 121 QRVPSAYNQFIKEEIQRIKAKNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQ--TK 180
           QRVPSAYNQFIKEEIQRIKA NPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQ  TK
Sbjct: 121 QRVPSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQAKTK 180

Query: 181 NDGSEKHLMSVPGLHY 194
           NDGSEKHLMSVPGLHY
Sbjct: 181 NDGSEKHLMSVPGLHY 193

[Close]

BLAST of MS011747 vs. ExPASy Swiss-Prot
Match: Q8GW46 (Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.6e-60
Identity = 119/164 (72.56%), Postives = 134/164 (81.71%), Query Frame = 0


Query: 10  EQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLSWPNSQGSGH 69
           EQLCYIPCNFCNI+LAV+VPCS+LFDIVTVRCGHC+NLWSVNMAAA QSLS PN Q    
Sbjct: 9   EQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQ---- 68

Query: 70  THSHGGSAADYRV-ELGSSSKCNNKMKMRATIKNPTTDPDQRVINRPPEKRQRVPSAYNQ 129
                  A +Y V E GSSS+ + K+  R + +  T   +QR++NRPPEKRQRVPSAYNQ
Sbjct: 69  -------ATNYAVPEYGSSSRSHTKIPSRISTRTIT---EQRIVNRPPEKRQRVPSAYNQ 128

Query: 130 FIKEEIQRIKAKNPDITHREAFSTAAKNWAHFPHIHFGLMLETN 173
           FIKEEIQRIKA NPDI+HREAFSTAAKNWAHFPHIHFGLMLE+N
Sbjct: 129 FIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESN 158

[Close]

BLAST of MS011747 vs. ExPASy Swiss-Prot
Match: Q9XFB0 (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-41
Identity = 90/177 (50.85%), Postives = 115/177 (64.97%), Query Frame = 0


Query: 5   INSQQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLSWPNS 64
           ++   E++CY+ C+FC  +LAVSVP ++LF +VTVRCGHC+NL S+N+  +    S P  
Sbjct: 3   VDFSSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPI 62

Query: 65  QGSGHTHSHGGSAADYRVELGSSSKCNNKMKMRATIKNPTTDPDQRVINRPPEKRQRVPS 124
                 H    ++   R +  SSS+  N +      + P   P      RPPEKRQRVPS
Sbjct: 63  HQDLQPHRQHTTSLVTRKDCASSSRSTNNLSENIDREAPRMPP-----IRPPEKRQRVPS 122

Query: 125 AYNQFIKEEIQRIKAKNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQTKNDGS 182
           AYN+FIKEEIQRIKA NP+I+HREAFSTAAKNWAHFPHIHFGL L+ N    + D S
Sbjct: 123 AYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLDGNKKGKQLDQS 174

[Close]

BLAST of MS011747 vs. ExPASy Swiss-Prot
Match: Q01JG2 (Protein YABBY 5 OS=Oryza sativa subsp. indica OX=39946 GN=YAB5 PE=3 SV=2)

HSP 1 Score: 167.5 bits (423), Expect = 1.4e-40
Identity = 105/222 (47.30%), Postives = 130/222 (58.56%), Query Frame = 0


Query: 7   SQQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNM------AAAFQSLS 66
           ++QEQLCY+ CNFC+ +LAV VPCS+LF  VTVRCGHC+NL SVN+      AAA  +  
Sbjct: 26  AEQEQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAAASTANQ 85

Query: 67  WPNSQG-SGHTHSHG--------GSAADYRVE---------LGSSSKCNNKMKM------ 126
            P  Q     T  HG         + A    E           S+S C N          
Sbjct: 86  LPFGQALLSPTSPHGLLDEVPSFQAPASLMTEQASPNVSSITSSNSSCANNAPATSMASA 145

Query: 127 --RATIKNPTTDPDQRVINRPPEKRQRVPSAYNQFIKEEIQRIKAKNPDITHREAFSTAA 186
             +AT + P    +    NR  EKRQRVPSAYN+FIK+EIQRIKA NPDITHREAFS AA
Sbjct: 146 ANKATQREPQQPKNAPSANRTSEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAA 205

Query: 187 KNWAHFPHIHFGLM----LETNNLQTKNDGSEKHLMSVPGLH 193
           KNWAHFPHIHFGLM    L+   +Q++ DG+ + ++   GL+
Sbjct: 206 KNWAHFPHIHFGLMPDQGLKKTGIQSQ-DGAGECMLFKDGLY 246

[Close]

BLAST of MS011747 vs. ExPASy Swiss-Prot
Match: Q0JBF0 (Protein YABBY 5 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB5 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.4e-40
Identity = 105/222 (47.30%), Postives = 130/222 (58.56%), Query Frame = 0


Query: 7   SQQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNM------AAAFQSLS 66
           ++QEQLCY+ CNFC+ +LAV VPCS+LF  VTVRCGHC+NL SVN+      AAA  +  
Sbjct: 26  AEQEQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAAASTANQ 85

Query: 67  WPNSQG-SGHTHSHG--------GSAADYRVE---------LGSSSKCNNKMKM------ 126
            P  Q     T  HG         + A    E           S+S C N          
Sbjct: 86  LPFGQALLSPTSPHGLLDEVPSFQAPASLMTEQASPNVSSITSSNSSCANNAPATSMASA 145

Query: 127 --RATIKNPTTDPDQRVINRPPEKRQRVPSAYNQFIKEEIQRIKAKNPDITHREAFSTAA 186
             +AT + P    +    NR  EKRQRVPSAYN+FIK+EIQRIKA NPDITHREAFS AA
Sbjct: 146 ANKATQREPQQPKNAPSANRTSEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAA 205

Query: 187 KNWAHFPHIHFGLM----LETNNLQTKNDGSEKHLMSVPGLH 193
           KNWAHFPHIHFGLM    L+   +Q++ DG+ + ++   GL+
Sbjct: 206 KNWAHFPHIHFGLMPDQGLKKTGIQSQ-DGAGECMLFKDGLY 246

[Close]

BLAST of MS011747 vs. ExPASy Swiss-Prot
Match: Q9XFB1 (Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.7e-39
Identity = 99/212 (46.70%), Postives = 124/212 (58.49%), Query Frame = 0


Query: 7   SQQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLSWPNSQG 66
           S  +QLCY+ C+FC+ VLAVSVP S+LF  VTVRCGHCSNL SV +  + ++L  P+   
Sbjct: 20  SSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTV--SMRALLLPSVSN 79

Query: 67  SGHTH----------------SHGGSAADYRVELG--SSSKCNNKMKMRATIKNPTTD-- 126
            GH+                   GG   +  + +   +S+   N+  + AT    + D  
Sbjct: 80  LGHSFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHL 139

Query: 127 ---PDQRVINRPPEKRQRVPSAYNQFIKEEIQRIKAKNPDITHREAFSTAAKNWAHFPHI 186
              P     NRPPEKRQRVPSAYN+FIKEEIQRIKA NPDI+HREAFS AAKNWAHFPHI
Sbjct: 140 QEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHI 199

Query: 187 HFGLMLE---TNNLQTKNDGSEKHLMSVPGLH 193
           HFGLM +   T     +    E  +M   G +
Sbjct: 200 HFGLMADHPPTKKANVRQQEGEDGMMGREGFY 229

[Close]

BLAST of MS011747 vs. ExPASy TrEMBL
Match: A0A6J1G2S8 (axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111450273 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 6.4e-92
Identity = 175/196 (89.29%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 1   MSSCINSQQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MSSCINS QEQLCYIPCNFCNIVLAVSVPCSN+FDIVTVRCGHCSNLWSVNMAAAFQSLS
Sbjct: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNIFDIVTVRCGHCSNLWSVNMAAAFQSLS 60

Query: 61  WPNSQGSGHTHSHGGSAAD-YRVELGSSSKCNNKMKMRATIKNPTTDPDQRVINRPPEKR 120
           W NSQ S HTHS  G AAD YR ELGSSSKCNNKMKMRA I+NPT + DQR+INR PEK+
Sbjct: 61  WQNSQASNHTHS--GLAADHYRAELGSSSKCNNKMKMRAPIRNPTNE-DQRIINRAPEKK 120

Query: 121 QRVPSAYNQFIKEEIQRIKAKNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQ--TK 180
           QRVPSAYNQFIKEEIQRIKA NPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQ  TK
Sbjct: 121 QRVPSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQAKTK 180

Query: 181 NDGSEKHLMSVPGLHY 194
           NDGSEKHLMSVPGLHY
Sbjct: 181 NDGSEKHLMSVPGLHY 193

[Close]

BLAST of MS011747 vs. ExPASy TrEMBL
Match: A0A6J1KCC5 (axial regulator YABBY 5-like OS=Cucurbita maxima OX=3661 GN=LOC111493637 PE=3 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 8.3e-92
Identity = 175/196 (89.29%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 1   MSSCINSQQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MSSCINS QEQLCYIPCNFCNIVLAVSVPCSN+FDIVTVRCGHCSNLWSVNMAAAFQSLS
Sbjct: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNIFDIVTVRCGHCSNLWSVNMAAAFQSLS 60

Query: 61  WPNSQGSGHTHSHGGSAAD-YRVELGSSSKCNNKMKMRATIKNPTTDPDQRVINRPPEKR 120
           W NSQ S HTHS  G AAD YR ELGSSSKCNNKMKMRA I+NPT D DQR+INR PEK+
Sbjct: 61  WQNSQASNHTHS--GLAADHYRAELGSSSKCNNKMKMRAPIRNPTND-DQRIINRAPEKK 120

Query: 121 QRVPSAYNQFIKEEIQRIKAKNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQ--TK 180
           QRVPSAYNQFIKEEIQRIKA NPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQ  TK
Sbjct: 121 QRVPSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQTKTK 180

Query: 181 NDGSEKHLMSVPGLHY 194
           +DGSEKHLMSVPGLHY
Sbjct: 181 SDGSEKHLMSVPGLHY 193

[Close]

BLAST of MS011747 vs. ExPASy TrEMBL
Match: A0A5A7V7D7 (Axial regulator YABBY 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G00020 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.3e-89
Identity = 172/195 (88.21%), Postives = 176/195 (90.26%), Query Frame = 0


Query: 1   MSSCINSQQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MSSCI+S QEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLS
Sbjct: 1   MSSCISSAQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLS 60

Query: 61  WPNSQGSGHTHSHGGSAADYRVELG-SSSKCNNKMKMRATIKNPTTD-PDQRVINRPPEK 120
           W NSQ S H+HS G     YRVELG SSSK N KMKMRA IKNPT D  DQR+INRPPEK
Sbjct: 61  WQNSQASNHSHS-GSGGDHYRVELGSSSSKSNTKMKMRAPIKNPTNDHHDQRLINRPPEK 120

Query: 121 RQRVPSAYNQFIKEEIQRIKAKNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQTKN 180
           RQRVPSAYNQFIKEEIQRIKA NPDITHREAFSTAAKNWAHFPHIHFGLML+TNNLQTKN
Sbjct: 121 RQRVPSAYNQFIKEEIQRIKATNPDITHREAFSTAAKNWAHFPHIHFGLMLDTNNLQTKN 180

Query: 181 DGSEKHLMSVPGLHY 194
           DGSEKHLMSV GLHY
Sbjct: 181 DGSEKHLMSVSGLHY 194

[Close]

BLAST of MS011747 vs. ExPASy TrEMBL
Match: A0A1S3C5K6 (axial regulator YABBY 5 OS=Cucumis melo OX=3656 GN=LOC103497152 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.3e-89
Identity = 172/195 (88.21%), Postives = 176/195 (90.26%), Query Frame = 0


Query: 1   MSSCINSQQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MSSCI+S QEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLS
Sbjct: 1   MSSCISSAQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLS 60

Query: 61  WPNSQGSGHTHSHGGSAADYRVELG-SSSKCNNKMKMRATIKNPTTD-PDQRVINRPPEK 120
           W NSQ S H+HS G     YRVELG SSSK N KMKMRA IKNPT D  DQR+INRPPEK
Sbjct: 61  WQNSQASNHSHS-GSGGDHYRVELGSSSSKSNTKMKMRAPIKNPTNDHHDQRLINRPPEK 120

Query: 121 RQRVPSAYNQFIKEEIQRIKAKNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQTKN 180
           RQRVPSAYNQFIKEEIQRIKA NPDITHREAFSTAAKNWAHFPHIHFGLML+TNNLQTKN
Sbjct: 121 RQRVPSAYNQFIKEEIQRIKATNPDITHREAFSTAAKNWAHFPHIHFGLMLDTNNLQTKN 180

Query: 181 DGSEKHLMSVPGLHY 194
           DGSEKHLMSV GLHY
Sbjct: 181 DGSEKHLMSVSGLHY 194

[Close]

BLAST of MS011747 vs. ExPASy TrEMBL
Match: A0A6J1FBX3 (axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111444212 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 8.1e-87
Identity = 166/193 (86.01%), Postives = 174/193 (90.16%), Query Frame = 0


Query: 1   MSSCINSQQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MSSCINS QEQLCYIPCNFCNIVLAVSVPCSNL DIVTVRCGHCSNLWSVNMAAAFQSLS
Sbjct: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS 60

Query: 61  WPNSQGSGHTHSHGGSAADYRVELGSSSKCNNKMKMRATIKNPTTDPDQRVINRPPEKRQ 120
           W NSQ S  +HSH G+AADYRVELGSSSKCNNKMK RA I+N T D DQRVINRPPEK+Q
Sbjct: 61  WKNSQAS--SHSHNGNAADYRVELGSSSKCNNKMKTRAPIQNNTND-DQRVINRPPEKKQ 120

Query: 121 RVPSAYNQFIKEEIQRIKAKNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQTKNDG 180
           RVPSAYN+FIKEEIQRIKA NPDITHREAFSTAAKNWAH+PHI   LMLE NNL+T+ DG
Sbjct: 121 RVPSAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQC-LMLEANNLKTQKDG 180

Query: 181 SEKHLMSVPGLHY 194
           SEKH MSVPGLHY
Sbjct: 181 SEKHYMSVPGLHY 189

[Close]

BLAST of MS011747 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 233.8 bits (595), Expect = 1.2e-61
Identity = 119/164 (72.56%), Postives = 134/164 (81.71%), Query Frame = 0


Query: 10  EQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLSWPNSQGSGH 69
           EQLCYIPCNFCNI+LAV+VPCS+LFDIVTVRCGHC+NLWSVNMAAA QSLS PN Q    
Sbjct: 9   EQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQ---- 68

Query: 70  THSHGGSAADYRV-ELGSSSKCNNKMKMRATIKNPTTDPDQRVINRPPEKRQRVPSAYNQ 129
                  A +Y V E GSSS+ + K+  R + +  T   +QR++NRPPEKRQRVPSAYNQ
Sbjct: 69  -------ATNYAVPEYGSSSRSHTKIPSRISTRTIT---EQRIVNRPPEKRQRVPSAYNQ 128

Query: 130 FIKEEIQRIKAKNPDITHREAFSTAAKNWAHFPHIHFGLMLETN 173
           FIKEEIQRIKA NPDI+HREAFSTAAKNWAHFPHIHFGLMLE+N
Sbjct: 129 FIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESN 158

[Close]

BLAST of MS011747 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 233.8 bits (595), Expect = 1.2e-61
Identity = 119/164 (72.56%), Postives = 134/164 (81.71%), Query Frame = 0


Query: 10  EQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLSWPNSQGSGH 69
           EQLCYIPCNFCNI+LAV+VPCS+LFDIVTVRCGHC+NLWSVNMAAA QSLS PN Q    
Sbjct: 9   EQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQ---- 68

Query: 70  THSHGGSAADYRV-ELGSSSKCNNKMKMRATIKNPTTDPDQRVINRPPEKRQRVPSAYNQ 129
                  A +Y V E GSSS+ + K+  R + +  T   +QR++NRPPEKRQRVPSAYNQ
Sbjct: 69  -------ATNYAVPEYGSSSRSHTKIPSRISTRTIT---EQRIVNRPPEKRQRVPSAYNQ 128

Query: 130 FIKEEIQRIKAKNPDITHREAFSTAAKNWAHFPHIHFGLMLETN 173
           FIKEEIQRIKA NPDI+HREAFSTAAKNWAHFPHIHFGLMLE+N
Sbjct: 129 FIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESN 158

[Close]

BLAST of MS011747 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 171.0 bits (432), Expect = 9.2e-43
Identity = 90/177 (50.85%), Postives = 115/177 (64.97%), Query Frame = 0


Query: 5   INSQQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLSWPNS 64
           ++   E++CY+ C+FC  +LAVSVP ++LF +VTVRCGHC+NL S+N+  +    S P  
Sbjct: 3   VDFSSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPI 62

Query: 65  QGSGHTHSHGGSAADYRVELGSSSKCNNKMKMRATIKNPTTDPDQRVINRPPEKRQRVPS 124
                 H    ++   R +  SSS+  N +      + P   P      RPPEKRQRVPS
Sbjct: 63  HQDLQPHRQHTTSLVTRKDCASSSRSTNNLSENIDREAPRMPP-----IRPPEKRQRVPS 122

Query: 125 AYNQFIKEEIQRIKAKNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQTKNDGS 182
           AYN+FIKEEIQRIKA NP+I+HREAFSTAAKNWAHFPHIHFGL L+ N    + D S
Sbjct: 123 AYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLDGNKKGKQLDQS 174

[Close]

BLAST of MS011747 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 163.3 bits (412), Expect = 1.9e-40
Identity = 99/212 (46.70%), Postives = 124/212 (58.49%), Query Frame = 0


Query: 7   SQQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLSWPNSQG 66
           S  +QLCY+ C+FC+ VLAVSVP S+LF  VTVRCGHCSNL SV +  + ++L  P+   
Sbjct: 20  SSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTV--SMRALLLPSVSN 79

Query: 67  SGHTH----------------SHGGSAADYRVELG--SSSKCNNKMKMRATIKNPTTD-- 126
            GH+                   GG   +  + +   +S+   N+  + AT    + D  
Sbjct: 80  LGHSFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHL 139

Query: 127 ---PDQRVINRPPEKRQRVPSAYNQFIKEEIQRIKAKNPDITHREAFSTAAKNWAHFPHI 186
              P     NRPPEKRQRVPSAYN+FIKEEIQRIKA NPDI+HREAFS AAKNWAHFPHI
Sbjct: 140 QEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHI 199

Query: 187 HFGLMLE---TNNLQTKNDGSEKHLMSVPGLH 193
           HFGLM +   T     +    E  +M   G +
Sbjct: 200 HFGLMADHPPTKKANVRQQEGEDGMMGREGFY 229

[Close]

BLAST of MS011747 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 155.6 bits (392), Expect = 4.0e-38
Identity = 93/186 (50.00%), Postives = 114/186 (61.29%), Query Frame = 0


Query: 7   SQQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLSWPNSQG 66
           S  + LCY+ CNFC  +LAV+VP ++LF  VTVRCG C+NL SVNM +     S      
Sbjct: 20  SPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQLQLQ 79

Query: 67  SGHTHSHGGSAADYRVELGSSSKCNNKMKMRATIKNPTTD--------------PDQRVI 126
            G  HS+  +  D   EL  +    N M M    ++PT +              P    +
Sbjct: 80  LG-PHSY-FNPQDILEELRDAPSNMNMMMMN---QHPTMNDIPSFMDLHQQHEIPKAPPV 139

Query: 127 NRPPEKRQRVPSAYNQFIKEEIQRIKAKNPDITHREAFSTAAKNWAHFPHIHFGLMLETN 179
           NRPPEKRQRVPSAYN+FIKEEIQRIKA NPDI+HREAFS AAKNWAHFPHIHFGL+ +  
Sbjct: 140 NRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLVPDNQ 199

The following BLAST results are available for this feature:

BLAST of MS011747 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889668.1	1.8e-93	89.34	axial regulator YABBY 5-like [Benincasa hispida]	[more]
XP_004139305.1	2.0e-92	89.12	axial regulator YABBY 5 isoform X1 [Cucumis sativus] >KGN60707.2 hypothetical pr...	[more]
XP_022946075.1	1.3e-91	89.29	axial regulator YABBY 5-like [Cucurbita moschata]	[more]
XP_022999176.1	1.7e-91	89.29	axial regulator YABBY 5-like [Cucurbita maxima]	[more]
XP_023545856.1	2.3e-91	89.29	axial regulator YABBY 5-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS011747 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GW46	1.6e-60	72.56	Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1	[more]
Q9XFB0	1.3e-41	50.85	Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV...	[more]
Q01JG2	1.4e-40	47.30	Protein YABBY 5 OS=Oryza sativa subsp. indica OX=39946 GN=YAB5 PE=3 SV=2	[more]
Q0JBF0	1.4e-40	47.30	Protein YABBY 5 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB5 PE=2 SV=1	[more]
Q9XFB1	2.7e-39	46.70	Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1	[more]

BLAST of MS011747 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2S8	6.4e-92	89.29	axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111450273 PE=3 ...	[more]
A0A6J1KCC5	8.3e-92	89.29	axial regulator YABBY 5-like OS=Cucurbita maxima OX=3661 GN=LOC111493637 PE=3 SV...	[more]
A0A5A7V7D7	1.3e-89	88.21	Axial regulator YABBY 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3C5K6	1.3e-89	88.21	axial regulator YABBY 5 OS=Cucumis melo OX=3656 GN=LOC103497152 PE=3 SV=1	[more]
A0A6J1FBX3	8.1e-87	86.01	axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111444212 PE=3 ...	[more]

BLAST of MS011747 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26580.1	1.2e-61	72.56	plant-specific transcription factor YABBY family protein	[more]
AT2G26580.2	1.2e-61	72.56	plant-specific transcription factor YABBY family protein	[more]
AT1G08465.1	9.2e-43	50.85	Plant-specific transcription factor YABBY family protein	[more]
AT4G00180.1	1.9e-40	46.70	Plant-specific transcription factor YABBY family protein	[more]
AT2G45190.1	4.0e-38	50.00	Plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 8..167 e-value: 4.6E-71 score: 238.8
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 1..183
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 104..162 e-value: 1.4E-6 score: 30.5
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 107..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..122
None	No IPR available	PANTHER	PTHR31675:SF6	AXIAL REGULATOR YABBY 5	coord: 1..183
None	No IPR available	CDD	cd00084	HMG-box	coord: 121..157 e-value: 1.22091E-4 score: 36.828

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS011747.1	MS011747.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development