MS011719 (gene) Bitter gourd (TR) v1

Overview


Name	MS011719
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Actin-related protein 2/3 complex subunit 3
Location	scaffold11: 162725 .. 163626 (+)
RNA-Seq Expression	MS011719
Synteny	MS011719

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGTTCATCACTCTAGCTTTGTGGATGAGGAAGGAGTAAACAAGGCTTGTGGCTGCCCCTTACTTCCTTTGAAAAGTCATATAAAGGGTCCTGCTCCAGTTTCAGATGAAGGTTTAGATTAACTTCAATCCGTTATTTTGTTCGTAAAATATCCTATATCCATATGTTTGATACTAAAATTTATCTTGGTTGGAAATTCACAGATAAGACTGATATTGTAGATGAAGCAATTACATTCTTTCGTGCCAATGTCTTCTTTAGAAATTTTGACATTAAGAGCCCTGCTGATAAGCTTCTCATCTATTTGACATTCTACATTAATGTGGCTTTGAAGAGGCTTGAAGGTTGCAGAACTTTGGCTGTAGGAACCAAGGCAATAATTAACTTGGGTTTGGAGGATGTTCCGGTGCCTGGAGAGTTGGGTTTCCCTTTTCCTGGACTCTTCCCTATTCCTCAATCTAACGAGGAAGCAGGTGAAGCTCAATCTTAGTTTTCAGTTATCTGCCCGTATCGCTACAATTTGTCAACTAGAAATGCTTACATATACAGACGCTACACTTCGCAATGATCAATTGTATATGCCCTTTGTTCCTTTTTCTGCATTCCACGCAATTTGCGTTGGTACTTCATTATTCTGAAAATGATCTTCCAATTCAGTTGATGCAGATATTATGAGTTGATGTTCTGTGCAATAACCTCCTGCTTCTTGTCTTAAGATTGGAATTCCCATAAGCTTCATATATGTCCACTTTTATATGCAGATGTATTCAGGAACTATTTGAAGCAGATAAGAGAGGAAACAAGTGGGAGACTCTTGAGTGTTGCCTATAGAGCCAATGGAACTCCAAATAAATGGTGGCTAGCATTTGCAAAGAGGAAATTTATGAACATCATCATCCCT

mRNA sequence

CAGGTTCATCACTCTAGCTTTGTGGATGAGGAAGGAGTAAACAAGGCTTGTGGCTGCCCCTTACTTCCTTTGAAAAGTCATATAAAGGGTCCTGCTCCAGTTTCAGATGAAGATAAGACTGATATTGTAGATGAAGCAATTACATTCTTTCGTGCCAATGTCTTCTTTAGAAATTTTGACATTAAGAGCCCTGCTGATAAGCTTCTCATCTATTTGACATTCTACATTAATGTGGCTTTGAAGAGGCTTGAAGGTTGCAGAACTTTGGCTGTAGGAACCAAGGCAATAATTAACTTGGGTTTGGAGGATGTTCCGGTGCCTGGAGAGTTGGGTTTCCCTTTTCCTGGACTCTTCCCTATTCCTCAATCTAACGAGGAAGCAGATGTATTCAGGAACTATTTGAAGCAGATAAGAGAGGAAACAAGTGGGAGACTCTTGAGTGTTGCCTATAGAGCCAATGGAACTCCAAATAAATGGTGGCTAGCATTTGCAAAGAGGAAATTTATGAACATCATCATCCCT

Coding sequence (CDS)

CAGGTTCATCACTCTAGCTTTGTGGATGAGGAAGGAGTAAACAAGGCTTGTGGCTGCCCCTTACTTCCTTTGAAAAGTCATATAAAGGGTCCTGCTCCAGTTTCAGATGAAGATAAGACTGATATTGTAGATGAAGCAATTACATTCTTTCGTGCCAATGTCTTCTTTAGAAATTTTGACATTAAGAGCCCTGCTGATAAGCTTCTCATCTATTTGACATTCTACATTAATGTGGCTTTGAAGAGGCTTGAAGGTTGCAGAACTTTGGCTGTAGGAACCAAGGCAATAATTAACTTGGGTTTGGAGGATGTTCCGGTGCCTGGAGAGTTGGGTTTCCCTTTTCCTGGACTCTTCCCTATTCCTCAATCTAACGAGGAAGCAGATGTATTCAGGAACTATTTGAAGCAGATAAGAGAGGAAACAAGTGGGAGACTCTTGAGTGTTGCCTATAGAGCCAATGGAACTCCAAATAAATGGTGGCTAGCATTTGCAAAGAGGAAATTTATGAACATCATCATCCCT

Protein sequence

QVHHSSFVDEEGVNKACGCPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIPQSNEEADVFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP

Homology

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BLAST of MS011719 vs. NCBI nr
Match: XP_022143039.1 (actin-related protein 2/3 complex subunit 3 [Momordica charantia])

HSP 1 Score: 360.9 bits (925), Expect = 6.1e-96
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 2   VHHSSFVDEEGVNKACGCPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDI 61
           VHHSSFVDEEGVNKACGCPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDI
Sbjct: 2   VHHSSFVDEEGVNKACGCPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDI 61

Query: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIP 121
           KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIP
Sbjct: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIP 121

Query: 122 QSNEEADVFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 175
           QSNEEADVFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP
Sbjct: 122 QSNEEADVFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 174

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BLAST of MS011719 vs. NCBI nr
Match: XP_023536665.1 (actin-related protein 2/3 complex subunit 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 353.2 bits (905), Expect = 1.3e-93
Identity = 167/173 (96.53%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 2   VHHSSFVDEEGVNKACGCPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDI 61
           VHHSSFVDEEG++KACGCPLLPLKSHIKGPAPVSD+DKTDIVDEAITFFRANVFFRNFDI
Sbjct: 2   VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDI 61

Query: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIP 121
           KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLE+VPVPGELGFPFPGLFPIP
Sbjct: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGELGFPFPGLFPIP 121

Query: 122 QSNEEADVFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 175
           QSNEEAD+FRNYL+QIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP
Sbjct: 122 QSNEEADLFRNYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 174

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BLAST of MS011719 vs. NCBI nr
Match: XP_022938181.1 (actin-related protein 2/3 complex subunit 3 isoform X1 [Cucurbita moschata] >XP_022965982.1 actin-related protein 2/3 complex subunit 3 [Cucurbita maxima] >KAG6586375.1 Actin-related protein 2/3 complex subunit 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 351.7 bits (901), Expect = 3.7e-93
Identity = 166/173 (95.95%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 2   VHHSSFVDEEGVNKACGCPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDI 61
           VHHSSFVDEEG++KACGCPLLPLKSHIKGPAPVSD+DKTDIVDEAITFFRANVFFRNFDI
Sbjct: 2   VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDI 61

Query: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIP 121
           KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLE+VPVPGELGFPFPGLFPIP
Sbjct: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGELGFPFPGLFPIP 121

Query: 122 QSNEEADVFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 175
           QSNEEA++FRNYL+QIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP
Sbjct: 122 QSNEEAELFRNYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 174

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BLAST of MS011719 vs. NCBI nr
Match: XP_008457213.1 (PREDICTED: actin-related protein 2/3 complex subunit 3 [Cucumis melo])

HSP 1 Score: 350.5 bits (898), Expect = 8.2e-93
Identity = 166/173 (95.95%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 2   VHHSSFVDEEGVNKACGCPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDI 61
           VHHSSFVDEEG++KACGCPLLPLKSHIKGPAPVSD+DKTDIVDEAITFFRANVFFRNFDI
Sbjct: 2   VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDI 61

Query: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIP 121
           KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLE+VPVPGE GFPFPGLFPIP
Sbjct: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPIP 121

Query: 122 QSNEEADVFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 175
           QSNEEA++FRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP
Sbjct: 122 QSNEEAELFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 174

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BLAST of MS011719 vs. NCBI nr
Match: XP_038889879.1 (actin-related protein 2/3 complex subunit 3 [Benincasa hispida] >XP_038889880.1 actin-related protein 2/3 complex subunit 3 [Benincasa hispida])

HSP 1 Score: 349.4 bits (895), Expect = 1.8e-92
Identity = 165/173 (95.38%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 2   VHHSSFVDEEGVNKACGCPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDI 61
           VHHSSFVDEEG++KACGCPLLPLKSHIKGPAPVSD+DKTDIVDEAITFFRANVFFRNFDI
Sbjct: 2   VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDI 61

Query: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIP 121
           KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLE+VPVPGE GFPFPGLFPIP
Sbjct: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPIP 121

Query: 122 QSNEEADVFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 175
           QSNEEA++FRNYLKQIREETSGRLLSVAYR+NGTPNKWWLAFAKRKFMNIIIP
Sbjct: 122 QSNEEAELFRNYLKQIREETSGRLLSVAYRSNGTPNKWWLAFAKRKFMNIIIP 174

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BLAST of MS011719 vs. ExPASy Swiss-Prot
Match: Q1ECJ7 (Actin-related protein 2/3 complex subunit 3 OS=Arabidopsis thaliana OX=3702 GN=ARPC3 PE=1 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 8.0e-91
Identity = 155/172 (90.12%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 2   VHHSSFVDEEGVNKACGCPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDI 61
           V+HSSFVDEEGV KACGCPLLPLKSHIKGPAPVS++DKTDIVDEAITFFRANVFF NFDI
Sbjct: 2   VYHSSFVDEEGVTKACGCPLLPLKSHIKGPAPVSEQDKTDIVDEAITFFRANVFFTNFDI 61

Query: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIP 121
           KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLED+PVPGE GFPFPGLF +P
Sbjct: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDIPVPGETGFPFPGLFSLP 121

Query: 122 QSNEEADVFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIII 174
           QS +EA++FRNYLKQ+REETSGRLLSVAYRANGTPNKWWLAFAKRKFMN+++
Sbjct: 122 QSQDEAELFRNYLKQVREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNVVV 173

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BLAST of MS011719 vs. ExPASy Swiss-Prot
Match: Q3T035 (Actin-related protein 2/3 complex subunit 3 OS=Bos taurus OX=9913 GN=ARPC3 PE=1 SV=3)

HSP 1 Score: 160.2 bits (404), Expect = 2.1e-38
Identity = 79/170 (46.47%), Postives = 113/170 (66.47%), Query Frame = 0


Query: 3   HHSSFVDEEGVNKACG-CPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDI 62
           +HSS +D +   K  G   LLP++S  KGPAP   +D TDIVDEAI +F+ANVFF+N++I
Sbjct: 4   YHSSLMDPD--TKLIGNMALLPIRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEI 63

Query: 63  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIP 122
           K+ AD+ LIY+T YI+  LK+L+ C + + G K +  LG+ + P+PGE GFP   ++  P
Sbjct: 64  KNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKP 123

Query: 123 QSNEEADVFRNYLKQIREETSGRLLSVAY-RANGTPNKWWLAFAKRKFMN 171
            + +E +V R YL+Q+R+ET  RL    +   N  P+KWW  F KR+FMN
Sbjct: 124 ANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMN 170

[Close]

BLAST of MS011719 vs. ExPASy Swiss-Prot
Match: O15145 (Actin-related protein 2/3 complex subunit 3 OS=Homo sapiens OX=9606 GN=ARPC3 PE=1 SV=3)

HSP 1 Score: 160.2 bits (404), Expect = 2.1e-38
Identity = 79/170 (46.47%), Postives = 113/170 (66.47%), Query Frame = 0


Query: 3   HHSSFVDEEGVNKACG-CPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDI 62
           +HSS +D +   K  G   LLP++S  KGPAP   +D TDIVDEAI +F+ANVFF+N++I
Sbjct: 4   YHSSLMDPD--TKLIGNMALLPIRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEI 63

Query: 63  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIP 122
           K+ AD+ LIY+T YI+  LK+L+ C + + G K +  LG+ + P+PGE GFP   ++  P
Sbjct: 64  KNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKP 123

Query: 123 QSNEEADVFRNYLKQIREETSGRLLSVAY-RANGTPNKWWLAFAKRKFMN 171
            + +E +V R YL+Q+R+ET  RL    +   N  P+KWW  F KR+FMN
Sbjct: 124 ANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMN 170

[Close]

BLAST of MS011719 vs. ExPASy Swiss-Prot
Match: Q9JM76 (Actin-related protein 2/3 complex subunit 3 OS=Mus musculus OX=10090 GN=Arpc3 PE=1 SV=3)

HSP 1 Score: 159.1 bits (401), Expect = 4.6e-38
Identity = 79/170 (46.47%), Postives = 113/170 (66.47%), Query Frame = 0


Query: 3   HHSSFVDEEGVNKACG-CPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDI 62
           +HSS +D +   K  G   LLPL+S  KGPAP   +D TDIVDEAI +F+ANVFF+N++I
Sbjct: 4   YHSSLMDPD--TKLIGNMALLPLRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEI 63

Query: 63  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIP 122
           K+ AD+ LIY+T YI+  LK+L+ C + + G K +  LG+ + P+PGE GFP   ++  P
Sbjct: 64  KNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKP 123

Query: 123 QSNEEADVFRNYLKQIREETSGRLLSVAY-RANGTPNKWWLAFAKRKFMN 171
            S +E ++ R YL+Q+R+ET  RL    +   +  P+KWW  F KR+FMN
Sbjct: 124 ASKQEDEMMRAYLQQLRQETGLRLCEKVFDPQSDKPSKWWTCFVKRQFMN 170

[Close]

BLAST of MS011719 vs. ExPASy Swiss-Prot
Match: A1DPK7 (Actin-related protein 2/3 complex subunit 3-A OS=Xenopus laevis OX=8355 GN=arpc3-a PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.6e-36
Identity = 70/151 (46.36%), Postives = 102/151 (67.55%), Query Frame = 0


Query: 21  LLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVAL 80
           +LP++S  KGPAP   +D TDI+DEAI +F+ANVFF+N++IK+ AD+ LIY+T YI+  L
Sbjct: 21  MLPIRSQFKGPAPRETKD-TDIIDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECL 80

Query: 81  KRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIPQSNEEADVFRNYLKQIREE 140
           K+L+ C +   G K +  LG+ + P+PGE GFP   ++  P + +E +V R YL+Q+R+E
Sbjct: 81  KKLQKCNSKGQGEKEMYTLGITNFPIPGEPGFPLNAMYVKPSNKQEDEVMRAYLQQLRQE 140

Query: 141 TSGRLLSVAY-RANGTPNKWWLAFAKRKFMN 171
           T  RL    +      P+KWW  F KR+FMN
Sbjct: 141 TGLRLCDKVFDPQTDKPSKWWTCFVKRQFMN 170

[Close]

BLAST of MS011719 vs. ExPASy TrEMBL
Match: A0A6J1CN65 (Actin-related protein 2/3 complex subunit 3 OS=Momordica charantia OX=3673 GN=LOC111013027 PE=3 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.0e-96
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 2   VHHSSFVDEEGVNKACGCPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDI 61
           VHHSSFVDEEGVNKACGCPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDI
Sbjct: 2   VHHSSFVDEEGVNKACGCPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDI 61

Query: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIP 121
           KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIP
Sbjct: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIP 121

Query: 122 QSNEEADVFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 175
           QSNEEADVFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP
Sbjct: 122 QSNEEADVFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 174

[Close]

BLAST of MS011719 vs. ExPASy TrEMBL
Match: A0A6J1HLS5 (Actin-related protein 2/3 complex subunit 3 OS=Cucurbita maxima OX=3661 GN=LOC111465702 PE=3 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 1.8e-93
Identity = 166/173 (95.95%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 2   VHHSSFVDEEGVNKACGCPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDI 61
           VHHSSFVDEEG++KACGCPLLPLKSHIKGPAPVSD+DKTDIVDEAITFFRANVFFRNFDI
Sbjct: 2   VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDI 61

Query: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIP 121
           KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLE+VPVPGELGFPFPGLFPIP
Sbjct: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGELGFPFPGLFPIP 121

Query: 122 QSNEEADVFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 175
           QSNEEA++FRNYL+QIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP
Sbjct: 122 QSNEEAELFRNYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 174

[Close]

BLAST of MS011719 vs. ExPASy TrEMBL
Match: A0A6J1FCE9 (Actin-related protein 2/3 complex subunit 3 OS=Cucurbita moschata OX=3662 GN=LOC111444343 PE=3 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 1.8e-93
Identity = 166/173 (95.95%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 2   VHHSSFVDEEGVNKACGCPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDI 61
           VHHSSFVDEEG++KACGCPLLPLKSHIKGPAPVSD+DKTDIVDEAITFFRANVFFRNFDI
Sbjct: 2   VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDI 61

Query: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIP 121
           KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLE+VPVPGELGFPFPGLFPIP
Sbjct: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGELGFPFPGLFPIP 121

Query: 122 QSNEEADVFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 175
           QSNEEA++FRNYL+QIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP
Sbjct: 122 QSNEEAELFRNYLRQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 174

[Close]

BLAST of MS011719 vs. ExPASy TrEMBL
Match: A0A1S3C5N9 (Actin-related protein 2/3 complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103496939 PE=3 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.0e-93
Identity = 166/173 (95.95%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 2   VHHSSFVDEEGVNKACGCPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDI 61
           VHHSSFVDEEG++KACGCPLLPLKSHIKGPAPVSD+DKTDIVDEAITFFRANVFFRNFDI
Sbjct: 2   VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDI 61

Query: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIP 121
           KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLE+VPVPGE GFPFPGLFPIP
Sbjct: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPIP 121

Query: 122 QSNEEADVFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 175
           QSNEEA++FRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP
Sbjct: 122 QSNEEAELFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 174

[Close]

BLAST of MS011719 vs. ExPASy TrEMBL
Match: A0A0A0LI55 (Actin-related protein 2/3 complex subunit 3 OS=Cucumis sativus OX=3659 GN=Csa_2G008100 PE=3 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 9.8e-92
Identity = 164/173 (94.80%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 2   VHHSSFVDEEGVNKACGCPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDI 61
           VHHSSFVDEEG++KACGCPLLPLKSHIKGPAPVSD+DKTDIVDEAITFFRANVFFRNFDI
Sbjct: 2   VHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDI 61

Query: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIP 121
           KS ADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLE+VPVPGE GFPFPGLFPIP
Sbjct: 62  KSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPIP 121

Query: 122 QSNEEADVFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 175
           QSNEEA++FRNYLKQIREETSGRLLSVAYR NGTPNKWWLAFAKRKFMNIIIP
Sbjct: 122 QSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP 174

[Close]

BLAST of MS011719 vs. TAIR 10
Match: AT1G60430.1 (actin-related protein C3 )

HSP 1 Score: 334.3 bits (856), Expect = 5.7e-92
Identity = 155/172 (90.12%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 2   VHHSSFVDEEGVNKACGCPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDI 61
           V+HSSFVDEEGV KACGCPLLPLKSHIKGPAPVS++DKTDIVDEAITFFRANVFF NFDI
Sbjct: 2   VYHSSFVDEEGVTKACGCPLLPLKSHIKGPAPVSEQDKTDIVDEAITFFRANVFFTNFDI 61

Query: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIP 121
           KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLED+PVPGE GFPFPGLF +P
Sbjct: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDIPVPGETGFPFPGLFSLP 121

Query: 122 QSNEEADVFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIII 174
           QS +EA++FRNYLKQ+REETSGRLLSVAYRANGTPNKWWLAFAKRKFMN+++
Sbjct: 122 QSQDEAELFRNYLKQVREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNVVV 173

[Close]

BLAST of MS011719 vs. TAIR 10
Match: AT1G60430.2 (actin-related protein C3 )

HSP 1 Score: 334.3 bits (856), Expect = 5.7e-92
Identity = 155/172 (90.12%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 2   VHHSSFVDEEGVNKACGCPLLPLKSHIKGPAPVSDEDKTDIVDEAITFFRANVFFRNFDI 61
           V+HSSFVDEEGV KACGCPLLPLKSHIKGPAPVS++DKTDIVDEAITFFRANVFF NFDI
Sbjct: 2   VYHSSFVDEEGVTKACGCPLLPLKSHIKGPAPVSEQDKTDIVDEAITFFRANVFFTNFDI 61

Query: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDVPVPGELGFPFPGLFPIP 121
           KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLED+PVPGE GFPFPGLF +P
Sbjct: 62  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDIPVPGETGFPFPGLFSLP 121

Query: 122 QSNEEADVFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIII 174
           QS +EA++FRNYLKQ+REETSGRLLSVAYRANGTPNKWWLAFAKRKFMN+++
Sbjct: 122 QSQDEAELFRNYLKQVREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNVVV 173

The following BLAST results are available for this feature:

BLAST of MS011719 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143039.1	6.1e-96	100.00	actin-related protein 2/3 complex subunit 3 [Momordica charantia]	[more]
XP_023536665.1	1.3e-93	96.53	actin-related protein 2/3 complex subunit 3 [Cucurbita pepo subsp. pepo]	[more]
XP_022938181.1	3.7e-93	95.95	actin-related protein 2/3 complex subunit 3 isoform X1 [Cucurbita moschata] >XP_...	[more]
XP_008457213.1	8.2e-93	95.95	PREDICTED: actin-related protein 2/3 complex subunit 3 [Cucumis melo]	[more]
XP_038889879.1	1.8e-92	95.38	actin-related protein 2/3 complex subunit 3 [Benincasa hispida] >XP_038889880.1 ...	[more]

BLAST of MS011719 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1ECJ7	8.0e-91	90.12	Actin-related protein 2/3 complex subunit 3 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q3T035	2.1e-38	46.47	Actin-related protein 2/3 complex subunit 3 OS=Bos taurus OX=9913 GN=ARPC3 PE=1 ...	[more]
O15145	2.1e-38	46.47	Actin-related protein 2/3 complex subunit 3 OS=Homo sapiens OX=9606 GN=ARPC3 PE=...	[more]
Q9JM76	4.6e-38	46.47	Actin-related protein 2/3 complex subunit 3 OS=Mus musculus OX=10090 GN=Arpc3 PE...	[more]
A1DPK7	5.6e-36	46.36	Actin-related protein 2/3 complex subunit 3-A OS=Xenopus laevis OX=8355 GN=arpc3...	[more]

BLAST of MS011719 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CN65	3.0e-96	100.00	Actin-related protein 2/3 complex subunit 3 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1HLS5	1.8e-93	95.95	Actin-related protein 2/3 complex subunit 3 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1FCE9	1.8e-93	95.95	Actin-related protein 2/3 complex subunit 3 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A1S3C5N9	4.0e-93	95.95	Actin-related protein 2/3 complex subunit 3 OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
A0A0A0LI55	9.8e-92	94.80	Actin-related protein 2/3 complex subunit 3 OS=Cucumis sativus OX=3659 GN=Csa_2G...	[more]

BLAST of MS011719 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60430.1	5.7e-92	90.12	actin-related protein C3	[more]
AT1G60430.2	5.7e-92	90.12	actin-related protein C3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007204	Actin-related protein 2/3 complex subunit 3	PFAM	PF04062	P21-Arc	coord: 2..170 e-value: 6.4E-63 score: 211.9
IPR007204	Actin-related protein 2/3 complex subunit 3	PIRSF	PIRSF016315	p21-ARC	coord: 1..173 e-value: 4.1E-68 score: 226.6
IPR007204	Actin-related protein 2/3 complex subunit 3	PANTHER	PTHR12391	ARP2/3 COMPLEX 21 KD SUBUNIT	coord: 2..171
IPR036753	Actin-related protein 2/3 complex subunit 3 superfamily	GENE3D	1.10.1760.10		coord: 1..173 e-value: 8.0E-66 score: 223.1
IPR036753	Actin-related protein 2/3 complex subunit 3 superfamily	SUPERFAMILY	69060	Arp2/3 complex 21 kDa subunit ARPC3	coord: 3..170
None	No IPR available	PANTHER	PTHR12391:SF0	ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 3	coord: 2..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS011719.1	MS011719.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034314	Arp2/3 complex-mediated actin nucleation
biological_process	GO:0030833	regulation of actin filament polymerization
cellular_component	GO:0005885	Arp2/3 protein complex
cellular_component	GO:0005856	cytoskeleton