MS011642 (gene) Bitter gourd (TR) v1

Overview


Name	MS011642
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	PLAT domain-containing protein 3-like
Location	scaffold239: 3435228 .. 3435662 (+)
RNA-Seq Expression	MS011642
Synteny	MS011642

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTGCGCGTACGTGATCTACGTACAAACGGGGACAGTGAAAAAGGCGGGGACTCACTCAACAATCAGCCTGGAGCTGAAGACGGGGGCGGGAGAGGGGATTTCGATCCCCAATCTGGAGGAATGGGGCGGAATTATGGGCCCAAATTACAACTTCTTTGAGACCGGCAGATTGGACACCTTCACAGGAAGAGGCCCATGCCTGACCTACCCAGACCCCATCTGCTCTCTCAATCTCACCTCCGACGCATCCGGCCCCTACCATGACTGGTACTGCGATTACGTGGAGGTCACGGTCTCCGCCCCGGCCCAGCCTTGCACCAAACAGCGCTTTTCCGTCGACCGGTGGCTTGCCCGTGACCGGGAGCCCTTCACCCTCACCGCCATCGTCGACTATTGTCCCTCTGCAAATGCCAATGCAAATCGCTCACTCCGC

mRNA sequence

GAGTGCGCGTACGTGATCTACGTACAAACGGGGACAGTGAAAAAGGCGGGGACTCACTCAACAATCAGCCTGGAGCTGAAGACGGGGGCGGGAGAGGGGATTTCGATCCCCAATCTGGAGGAATGGGGCGGAATTATGGGCCCAAATTACAACTTCTTTGAGACCGGCAGATTGGACACCTTCACAGGAAGAGGCCCATGCCTGACCTACCCAGACCCCATCTGCTCTCTCAATCTCACCTCCGACGCATCCGGCCCCTACCATGACTGGTACTGCGATTACGTGGAGGTCACGGTCTCCGCCCCGGCCCAGCCTTGCACCAAACAGCGCTTTTCCGTCGACCGGTGGCTTGCCCGTGACCGGGAGCCCTTCACCCTCACCGCCATCGTCGACTATTGTCCCTCTGCAAATGCCAATGCAAATCGCTCACTCCGC

Coding sequence (CDS)

GAGTGCGCGTACGTGATCTACGTACAAACGGGGACAGTGAAAAAGGCGGGGACTCACTCAACAATCAGCCTGGAGCTGAAGACGGGGGCGGGAGAGGGGATTTCGATCCCCAATCTGGAGGAATGGGGCGGAATTATGGGCCCAAATTACAACTTCTTTGAGACCGGCAGATTGGACACCTTCACAGGAAGAGGCCCATGCCTGACCTACCCAGACCCCATCTGCTCTCTCAATCTCACCTCCGACGCATCCGGCCCCTACCATGACTGGTACTGCGATTACGTGGAGGTCACGGTCTCCGCCCCGGCCCAGCCTTGCACCAAACAGCGCTTTTCCGTCGACCGGTGGCTTGCCCGTGACCGGGAGCCCTTCACCCTCACCGCCATCGTCGACTATTGTCCCTCTGCAAATGCCAATGCAAATCGCTCACTCCGC

Protein sequence

ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVSAPAQPCTKQRFSVDRWLARDREPFTLTAIVDYCPSANANANRSLR

Homology

[Close]

BLAST of MS011642 vs. NCBI nr
Match: XP_022133078.1 (PLAT domain-containing protein 3-like [Momordica charantia])

HSP 1 Score: 311.6 bits (797), Expect = 3.5e-81
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDT 60
           ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDT
Sbjct: 43  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDT 102

Query: 61  FTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVSAPAQPCTKQRFSVDRWLARD 120
           FTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVSAPA PCTKQRFSVDRWLARD
Sbjct: 103 FTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVSAPAHPCTKQRFSVDRWLARD 162

Query: 121 REPFTLTAIVDYCPSANANANRSLR 146
           REPFTLTAIVDYCPSANANANRSLR
Sbjct: 163 REPFTLTAIVDYCPSANANANRSLR 187

[Close]

BLAST of MS011642 vs. NCBI nr
Match: KAG6594871.1 (PLAT domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 241.1 bits (614), Expect = 5.9e-60
Identity = 108/133 (81.20%), Postives = 120/133 (90.23%), Query Frame = 0


Query: 1   ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDT 60
           EC Y+IYVQTGTVKKAGTHSTI LE+KT +GEGI +PNLEEWGGIMGP+YNFFETGRLDT
Sbjct: 34  ECGYLIYVQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDT 93

Query: 61  FTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVSAPAQPCTKQRFSVDRWLARD 120
           FTGRGPCLT   PICSLNLTS+ SGPYH WYCDYVEVT SAPA PC KQRFSV++WLA D
Sbjct: 94  FTGRGPCLT--SPICSLNLTSNGSGPYHAWYCDYVEVTASAPAHPCHKQRFSVNQWLATD 153

Query: 121 REPFTLTAIVDYC 134
           +EP++LTA+VDYC
Sbjct: 154 QEPYSLTAVVDYC 164

[Close]

BLAST of MS011642 vs. NCBI nr
Match: XP_022963077.1 (PLAT domain-containing protein 3-like [Cucurbita moschata])

HSP 1 Score: 239.6 bits (610), Expect = 1.7e-59
Identity = 107/133 (80.45%), Postives = 119/133 (89.47%), Query Frame = 0


Query: 1   ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDT 60
           EC Y+IYVQTGTVKKAGTHSTI LE+KT +GEGI +PNLEEWGGIMGP+YNFFETGRLDT
Sbjct: 34  ECGYLIYVQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDT 93

Query: 61  FTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVSAPAQPCTKQRFSVDRWLARD 120
           FTGRGPCLT   PICSLNLTS+ SGPYH WYCDYVEVT SAP  PC KQRFSV++WLA D
Sbjct: 94  FTGRGPCLT--SPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLATD 153

Query: 121 REPFTLTAIVDYC 134
           +EP++LTA+VDYC
Sbjct: 154 QEPYSLTAVVDYC 164

[Close]

BLAST of MS011642 vs. NCBI nr
Match: XP_023518309.1 (PLAT domain-containing protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 239.6 bits (610), Expect = 1.7e-59
Identity = 106/133 (79.70%), Postives = 119/133 (89.47%), Query Frame = 0


Query: 1   ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDT 60
           EC Y+IYVQTGTVKKAGTHSTI LE+KT +GEGI +PNLEEWGGIMGP+YNFFETGRLDT
Sbjct: 31  ECGYLIYVQTGTVKKAGTHSTIGLEVKTASGEGILVPNLEEWGGIMGPDYNFFETGRLDT 90

Query: 61  FTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVSAPAQPCTKQRFSVDRWLARD 120
           FTGRGPCLT   P+CSLNLTS+ SGPYH WYCDYVEVT SAP  PC KQRFSV++WLA D
Sbjct: 91  FTGRGPCLT--SPVCSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLATD 150

Query: 121 REPFTLTAIVDYC 134
           +EP++LTA+VDYC
Sbjct: 151 QEPYSLTAVVDYC 161

[Close]

BLAST of MS011642 vs. NCBI nr
Match: XP_023004029.1 (PLAT domain-containing protein 3-like [Cucurbita maxima] >XP_023004030.1 PLAT domain-containing protein 3-like [Cucurbita maxima])

HSP 1 Score: 236.9 bits (603), Expect = 1.1e-58
Identity = 106/133 (79.70%), Postives = 117/133 (87.97%), Query Frame = 0


Query: 1   ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDT 60
           EC Y+IYVQTGTVKKAGTHSTI LE+KT +GEGI +PNLEEWGGIMGP+YNFFETGRLD 
Sbjct: 31  ECGYLIYVQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDI 90

Query: 61  FTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVSAPAQPCTKQRFSVDRWLARD 120
           FTGRGPCLT   PICSLNLTS+ SGPYH WYCDYVEVT SAP  PC KQRFSV++WLA D
Sbjct: 91  FTGRGPCLT--SPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLATD 150

Query: 121 REPFTLTAIVDYC 134
            EP++LTA+VDYC
Sbjct: 151 HEPYSLTAVVDYC 161

[Close]

BLAST of MS011642 vs. ExPASy Swiss-Prot
Match: O65660 (PLAT domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLAT1 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.3e-37
Identity = 67/134 (50.00%), Postives = 91/134 (67.91%), Query Frame = 0


Query: 1   ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDT 60
           +C Y  Y++TG++ KAGT S IS  +    G+ I I NL+ W G+MGP+YN+FE G LD 
Sbjct: 28  DCVYTFYLRTGSIWKAGTDSIISARIYDKDGDYIGIKNLQAWAGLMGPDYNYFERGNLDI 87

Query: 61  FTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVSAPAQPCTKQRFSVDRWLARD 120
           F+GR PCL  P PIC+LNLTSD SG +H WY +YVE+T +     C+ Q F +++WLA D
Sbjct: 88  FSGRAPCL--PSPICALNLTSDGSGDHHGWYVNYVEITTAGVHAQCSTQDFEIEQWLATD 147

Query: 121 REPFTLTAIVDYCP 135
             P+ LTA+ + CP
Sbjct: 148 TSPYELTAVRNNCP 159

[Close]

BLAST of MS011642 vs. ExPASy Swiss-Prot
Match: Q9SIE7 (PLAT domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLAT2 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.1e-36
Identity = 67/134 (50.00%), Postives = 90/134 (67.16%), Query Frame = 0


Query: 1   ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDT 60
           +C Y  +++TG+  KAGT S IS  +    G+ I I NLE WGG+MGP YN++E G LD 
Sbjct: 30  DCVYTFFLRTGSTFKAGTDSIISARVYDKYGDYIGIRNLEAWGGLMGPGYNYYERGNLDI 89

Query: 61  FTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVSAPAQPCTKQRFSVDRWLARD 120
           F+G+ PCL  P P+CSLNLTSD SG +H WY +YVEVT +     C+ Q F V++WLA D
Sbjct: 90  FSGKAPCL--PSPVCSLNLTSDGSGDHHGWYVNYVEVTTAGVHAKCSYQSFDVEQWLASD 149

Query: 121 REPFTLTAIVDYCP 135
             P+ L+A+ + CP
Sbjct: 150 TSPYELSAVRNNCP 161

[Close]

BLAST of MS011642 vs. ExPASy Swiss-Prot
Match: Q2V2V3 (PLAT domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLAT3 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.7e-25
Identity = 51/106 (48.11%), Postives = 75/106 (70.75%), Query Frame = 0


Query: 22  ISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTS 81
           +SL L    G+   I +L  WGG+MGP +++FE G LD F+G G CL+   P+C++NLTS
Sbjct: 1   MSLRLYDSYGQDAVISDLVSWGGLMGPFHDYFERGNLDIFSGLGSCLS--GPVCAMNLTS 60

Query: 82  DASGPYHDWYCDYVEVTVS-APAQPCTKQRFSVDRWLARDREPFTL 127
           D SG +H WYC+YVEVT+S +  + C++++F V++WLARD  P+ L
Sbjct: 61  DGSGDHHGWYCNYVEVTMSESRRRSCSQEKFEVEQWLARDASPYEL 104

[Close]

BLAST of MS011642 vs. ExPASy TrEMBL
Match: A0A6J1BY14 (PLAT domain-containing protein 3-like OS=Momordica charantia OX=3673 GN=LOC111005762 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.7e-81
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0


Query: 1   ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDT 60
           ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDT
Sbjct: 43  ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDT 102

Query: 61  FTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVSAPAQPCTKQRFSVDRWLARD 120
           FTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVSAPA PCTKQRFSVDRWLARD
Sbjct: 103 FTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVSAPAHPCTKQRFSVDRWLARD 162

Query: 121 REPFTLTAIVDYCPSANANANRSLR 146
           REPFTLTAIVDYCPSANANANRSLR
Sbjct: 163 REPFTLTAIVDYCPSANANANRSLR 187

[Close]

BLAST of MS011642 vs. ExPASy TrEMBL
Match: A0A6J1HE92 (PLAT domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111463386 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 8.3e-60
Identity = 107/133 (80.45%), Postives = 119/133 (89.47%), Query Frame = 0


Query: 1   ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDT 60
           EC Y+IYVQTGTVKKAGTHSTI LE+KT +GEGI +PNLEEWGGIMGP+YNFFETGRLDT
Sbjct: 34  ECGYLIYVQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDT 93

Query: 61  FTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVSAPAQPCTKQRFSVDRWLARD 120
           FTGRGPCLT   PICSLNLTS+ SGPYH WYCDYVEVT SAP  PC KQRFSV++WLA D
Sbjct: 94  FTGRGPCLT--SPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLATD 153

Query: 121 REPFTLTAIVDYC 134
           +EP++LTA+VDYC
Sbjct: 154 QEPYSLTAVVDYC 164

[Close]

BLAST of MS011642 vs. ExPASy TrEMBL
Match: A0A6J1KV14 (PLAT domain-containing protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111497461 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 5.4e-59
Identity = 106/133 (79.70%), Postives = 117/133 (87.97%), Query Frame = 0


Query: 1   ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDT 60
           EC Y+IYVQTGTVKKAGTHSTI LE+KT +GEGI +PNLEEWGGIMGP+YNFFETGRLD 
Sbjct: 31  ECGYLIYVQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDI 90

Query: 61  FTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVSAPAQPCTKQRFSVDRWLARD 120
           FTGRGPCLT   PICSLNLTS+ SGPYH WYCDYVEVT SAP  PC KQRFSV++WLA D
Sbjct: 91  FTGRGPCLT--SPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLATD 150

Query: 121 REPFTLTAIVDYC 134
            EP++LTA+VDYC
Sbjct: 151 HEPYSLTAVVDYC 161

[Close]

BLAST of MS011642 vs. ExPASy TrEMBL
Match: A0A6A6KWY5 (PLAT domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_035928 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.4e-43
Identity = 77/134 (57.46%), Postives = 103/134 (76.87%), Query Frame = 0


Query: 1   ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDT 60
           +C Y +Y++TG++ K GT S IS+      GEG+ IPNLE WGG+MG NYN+FE G LD 
Sbjct: 27  DCVYTVYIRTGSIFKGGTDSIISVRFYDAYGEGVEIPNLESWGGLMGLNYNYFERGNLDI 86

Query: 61  FTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVSAPAQPCTKQRFSVDRWLARD 120
           F+GRGPCL+   P+C+LNLTSD SGP+H WYC+YVEVT++    PC++Q+F+V++WLARD
Sbjct: 87  FSGRGPCLS--TPVCALNLTSDGSGPHHGWYCNYVEVTITGVHTPCSQQQFTVEQWLARD 146

Query: 121 REPFTLTAIVDYCP 135
             P+ LTAI +YCP
Sbjct: 147 APPYELTAIRNYCP 158

[Close]

BLAST of MS011642 vs. ExPASy TrEMBL
Match: A0A6P8DMV1 (PLAT domain-containing protein 3-like OS=Punica granatum OX=22663 GN=LOC116209238 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.4e-43
Identity = 80/143 (55.94%), Postives = 103/143 (72.03%), Query Frame = 0


Query: 1   ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDT 60
           EC Y +YV+TG++ K GT S +SL L    GEGI + NLE WGG+M P +N+FE G LD 
Sbjct: 34  ECVYTVYVRTGSIIKGGTDSIVSLRLYDAYGEGIGVRNLEAWGGLMPPGHNYFERGNLDI 93

Query: 61  FTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVSAPAQPCTKQRFSVDRWLARD 120
           F+GRGPCL  P PIC++NLTSD SGP+H WYC+YVEVT + P  PC++Q+F+V++WLARD
Sbjct: 94  FSGRGPCL--PAPICAMNLTSDGSGPHHGWYCNYVEVTSTRPHVPCSQQQFTVEQWLARD 153

Query: 121 REPFTLTAIVDYCPSANANANRS 144
             P+ LTAI +YCP        S
Sbjct: 154 TSPYELTAIRNYCPDGGVGKGAS 174

[Close]

BLAST of MS011642 vs. TAIR 10
Match: AT4G39730.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 156.0 bits (393), Expect = 2.3e-38
Identity = 67/134 (50.00%), Postives = 91/134 (67.91%), Query Frame = 0


Query: 1   ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDT 60
           +C Y  Y++TG++ KAGT S IS  +    G+ I I NL+ W G+MGP+YN+FE G LD 
Sbjct: 28  DCVYTFYLRTGSIWKAGTDSIISARIYDKDGDYIGIKNLQAWAGLMGPDYNYFERGNLDI 87

Query: 61  FTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVSAPAQPCTKQRFSVDRWLARD 120
           F+GR PCL  P PIC+LNLTSD SG +H WY +YVE+T +     C+ Q F +++WLA D
Sbjct: 88  FSGRAPCL--PSPICALNLTSDGSGDHHGWYVNYVEITTAGVHAQCSTQDFEIEQWLATD 147

Query: 121 REPFTLTAIVDYCP 135
             P+ LTA+ + CP
Sbjct: 148 TSPYELTAVRNNCP 159

[Close]

BLAST of MS011642 vs. TAIR 10
Match: AT2G22170.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 153.3 bits (386), Expect = 1.5e-37
Identity = 67/134 (50.00%), Postives = 90/134 (67.16%), Query Frame = 0


Query: 1   ECAYVIYVQTGTVKKAGTHSTISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDT 60
           +C Y  +++TG+  KAGT S IS  +    G+ I I NLE WGG+MGP YN++E G LD 
Sbjct: 30  DCVYTFFLRTGSTFKAGTDSIISARVYDKYGDYIGIRNLEAWGGLMGPGYNYYERGNLDI 89

Query: 61  FTGRGPCLTYPDPICSLNLTSDASGPYHDWYCDYVEVTVSAPAQPCTKQRFSVDRWLARD 120
           F+G+ PCL  P P+CSLNLTSD SG +H WY +YVEVT +     C+ Q F V++WLA D
Sbjct: 90  FSGKAPCL--PSPVCSLNLTSDGSGDHHGWYVNYVEVTTAGVHAKCSYQSFDVEQWLASD 149

Query: 121 REPFTLTAIVDYCP 135
             P+ L+A+ + CP
Sbjct: 150 TSPYELSAVRNNCP 161

[Close]

BLAST of MS011642 vs. TAIR 10
Match: AT5G65158.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 117.1 bits (292), Expect = 1.2e-26
Identity = 51/106 (48.11%), Postives = 75/106 (70.75%), Query Frame = 0


Query: 22  ISLELKTGAGEGISIPNLEEWGGIMGPNYNFFETGRLDTFTGRGPCLTYPDPICSLNLTS 81
           +SL L    G+   I +L  WGG+MGP +++FE G LD F+G G CL+   P+C++NLTS
Sbjct: 1   MSLRLYDSYGQDAVISDLVSWGGLMGPFHDYFERGNLDIFSGLGSCLS--GPVCAMNLTS 60

Query: 82  DASGPYHDWYCDYVEVTVS-APAQPCTKQRFSVDRWLARDREPFTL 127
           D SG +H WYC+YVEVT+S +  + C++++F V++WLARD  P+ L
Sbjct: 61  DGSGDHHGWYCNYVEVTMSESRRRSCSQEKFEVEQWLARDASPYEL 104

The following BLAST results are available for this feature:

BLAST of MS011642 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133078.1	3.5e-81	99.31	PLAT domain-containing protein 3-like [Momordica charantia]	[more]
KAG6594871.1	5.9e-60	81.20	PLAT domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022963077.1	1.7e-59	80.45	PLAT domain-containing protein 3-like [Cucurbita moschata]	[more]
XP_023518309.1	1.7e-59	79.70	PLAT domain-containing protein 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_023004029.1	1.1e-58	79.70	PLAT domain-containing protein 3-like [Cucurbita maxima] >XP_023004030.1 PLAT do...	[more]

BLAST of MS011642 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65660	3.3e-37	50.00	PLAT domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLAT1 PE=1 S...	[more]
Q9SIE7	2.1e-36	50.00	PLAT domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLAT2 PE=2 S...	[more]
Q2V2V3	1.7e-25	48.11	PLAT domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLAT3 PE=4 S...	[more]

BLAST of MS011642 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BY14	1.7e-81	99.31	PLAT domain-containing protein 3-like OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A6J1HE92	8.3e-60	80.45	PLAT domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A6J1KV14	5.4e-59	79.70	PLAT domain-containing protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC11149746...	[more]
A0A6A6KWY5	1.4e-43	57.46	PLAT domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_035928 PE=...	[more]
A0A6P8DMV1	1.4e-43	55.94	PLAT domain-containing protein 3-like OS=Punica granatum OX=22663 GN=LOC11620923...	[more]

BLAST of MS011642 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39730.1	2.3e-38	50.00	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT2G22170.1	1.5e-37	50.00	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT5G65158.1	1.2e-26	48.11	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001024	PLAT/LH2 domain	PFAM	PF01477	PLAT	coord: 4..128 e-value: 1.0E-12 score: 48.6
IPR001024	PLAT/LH2 domain	PROSITE	PS50095	PLAT	coord: 2..131 score: 19.905827
None	No IPR available	GENE3D	2.60.60.20	PLAT/LH2 domain	coord: 2..124 e-value: 2.3E-18 score: 68.5
None	No IPR available	PANTHER	PTHR31718:SF0	PLAT DOMAIN-CONTAINING PROTEIN 1	coord: 1..138
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 1..138
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 2..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS011642.1	MS011642.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding