MS011541 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCCAAATTTCTCCAATATTTCAGGATTACGTGGTCCGATTCCCACATCAACCAACCCCATGGCGGAACAGCAATCCGTTTCGTTCTTGACCAGGCCTCCGGTAACTTCGGGGGAAATTTAACATTTTAATTCAGCGGACAAGTAAAAAAGAGAGAAATTTTCAAGATCTGAACATAATTTTATGTTGTGTGTTGTCTTTCAGGATGTGGGTTTGCTTCGAAGAACCAATTCCTGTTGGGTAAAGTCAGCATGAAGATCAATGTCGTACCGGGAAACTCTGTCACTGCCTTCTACGTA GCCAAATTTCTCCAATATTTCAGGATTACGTGGTCCGATTCCCACATCAACCAACCCCATGGCGGAACAGCAATCCGTTTCGTTCTTGACCAGGCCTCCGGATGTGGGTTTGCTTCGAAGAACCAATTCCTGTTGGGTAAAGTCAGCATGAAGATCAATGTCGTACCGGGAAACTCTGTCACTGCCTTCTACGTA GCCAAATTTCTCCAATATTTCAGGATTACGTGGTCCGATTCCCACATCAACCAACCCCATGGCGGAACAGCAATCCGTTTCGTTCTTGACCAGGCCTCCGGATGTGGGTTTGCTTCGAAGAACCAATTCCTGTTGGGTAAAGTCAGCATGAAGATCAATGTCGTACCGGGAAACTCTGTCACTGCCTTCTACGTA AKFLQYFRITWSDSHINQPHGGTAIRFVLDQASGCGFASKNQFLLGKVSMKINVVPGNSVTAFYV Homology
BLAST of MS011541 vs. NCBI nr
Match: XP_011625079.1 (LOW QUALITY PROTEIN: probable xyloglucan endotransglucosylase/hydrolase protein 6 [Amborella trichopoda]) HSP 1 Score: 100.5 bits (249), Expect = 5.5e-18 Identity = 48/68 (70.59%), Postives = 57/68 (83.82%), Query Frame = 0
BLAST of MS011541 vs. NCBI nr
Match: ERN10442.1 (hypothetical protein AMTR_s00026p00217290 [Amborella trichopoda]) HSP 1 Score: 100.1 bits (248), Expect = 7.2e-18 Identity = 47/68 (69.12%), Postives = 57/68 (83.82%), Query Frame = 0
BLAST of MS011541 vs. NCBI nr
Match: XP_010248304.1 (PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 6 [Nelumbo nucifera]) HSP 1 Score: 99.0 bits (245), Expect = 1.6e-17 Identity = 47/68 (69.12%), Postives = 56/68 (82.35%), Query Frame = 0
BLAST of MS011541 vs. NCBI nr
Match: XP_031480252.1 (probable xyloglucan endotransglucosylase/hydrolase protein 7 [Nymphaea colorata]) HSP 1 Score: 98.6 bits (244), Expect = 2.1e-17 Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 0
BLAST of MS011541 vs. NCBI nr
Match: KAF3790676.1 (putative xyloglucan endotransglucosylase/hydrolase protein 7 [Nymphaea thermarum]) HSP 1 Score: 98.6 bits (244), Expect = 2.1e-17 Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 0
BLAST of MS011541 vs. ExPASy Swiss-Prot
Match: Q8LER3 (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana OX=3702 GN=XTH7 PE=2 SV=2) HSP 1 Score: 87.0 bits (214), Expect = 8.3e-17 Identity = 42/68 (61.76%), Postives = 51/68 (75.00%), Query Frame = 0
BLAST of MS011541 vs. ExPASy Swiss-Prot
Match: Q8LF99 (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana OX=3702 GN=XTH6 PE=2 SV=2) HSP 1 Score: 83.6 bits (205), Expect = 9.2e-16 Identity = 38/68 (55.88%), Postives = 52/68 (76.47%), Query Frame = 0
BLAST of MS011541 vs. ExPASy Swiss-Prot
Match: Q9ZV40 (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana OX=3702 GN=XTH21 PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.3e-09 Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = 0
BLAST of MS011541 vs. ExPASy Swiss-Prot
Match: Q38857 (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana OX=3702 GN=XTH22 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 6.4e-09 Identity = 30/68 (44.12%), Postives = 41/68 (60.29%), Query Frame = 0
BLAST of MS011541 vs. ExPASy Swiss-Prot
Match: Q38910 (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana OX=3702 GN=XTH23 PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 6.4e-09 Identity = 30/68 (44.12%), Postives = 41/68 (60.29%), Query Frame = 0
BLAST of MS011541 vs. ExPASy TrEMBL
Match: W1PKB6 (Xyloglucan endotransglucosylase/hydrolase OS=Amborella trichopoda OX=13333 GN=AMTR_s00026p00217290 PE=3 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 3.5e-18 Identity = 47/68 (69.12%), Postives = 57/68 (83.82%), Query Frame = 0
BLAST of MS011541 vs. ExPASy TrEMBL
Match: A0A7N0T5E6 (Xyloglucan endotransglucosylase/hydrolase OS=Kalanchoe fedtschenkoi OX=63787 PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 7.8e-18 Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 0
BLAST of MS011541 vs. ExPASy TrEMBL
Match: A0A1U7Z7C0 (Xyloglucan endotransglucosylase/hydrolase OS=Nelumbo nucifera OX=4432 GN=LOC104591216 PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 7.8e-18 Identity = 47/68 (69.12%), Postives = 56/68 (82.35%), Query Frame = 0
BLAST of MS011541 vs. ExPASy TrEMBL
Match: A0A6I9S320 (Xyloglucan endotransglucosylase/hydrolase OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105055894 PE=3 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.3e-17 Identity = 46/68 (67.65%), Postives = 56/68 (82.35%), Query Frame = 0
BLAST of MS011541 vs. ExPASy TrEMBL
Match: A0A443NWK6 (Xyloglucan endotransglucosylase/hydrolase OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_01164200 PE=3 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 3.0e-17 Identity = 48/68 (70.59%), Postives = 54/68 (79.41%), Query Frame = 0
BLAST of MS011541 vs. TAIR 10
Match: AT4G37800.1 (xyloglucan endotransglucosylase/hydrolase 7 ) HSP 1 Score: 87.0 bits (214), Expect = 5.9e-18 Identity = 42/68 (61.76%), Postives = 51/68 (75.00%), Query Frame = 0
BLAST of MS011541 vs. TAIR 10
Match: AT5G65730.1 (xyloglucan endotransglucosylase/hydrolase 6 ) HSP 1 Score: 83.6 bits (205), Expect = 6.5e-17 Identity = 38/68 (55.88%), Postives = 52/68 (76.47%), Query Frame = 0
BLAST of MS011541 vs. TAIR 10
Match: AT2G18800.1 (xyloglucan endotransglucosylase/hydrolase 21 ) HSP 1 Score: 63.2 bits (152), Expect = 9.1e-11 Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = 0
BLAST of MS011541 vs. TAIR 10
Match: AT4G25810.1 (xyloglucan endotransglycosylase 6 ) HSP 1 Score: 60.8 bits (146), Expect = 4.5e-10 Identity = 30/68 (44.12%), Postives = 41/68 (60.29%), Query Frame = 0
BLAST of MS011541 vs. TAIR 10
Match: AT5G57560.1 (Xyloglucan endotransglucosylase/hydrolase family protein ) HSP 1 Score: 60.8 bits (146), Expect = 4.5e-10 Identity = 30/68 (44.12%), Postives = 41/68 (60.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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