MS011392 (gene) Bitter gourd (TR) v1

Overview


Name	MS011392
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Mitochondrial transcription termination factor family protein
Location	scaffold239: 1541525 .. 1542667 (-)
RNA-Seq Expression	MS011392
Synteny	MS011392

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAACAAAAGTCGAGGCTTTTTTCAAGCTCCGGTATTTACTATGTTCGAGGCAAGCATTTGCTTCCATTTTGAGAAAACAACCTCTAGAAACTTCGCAAAACTTAAGGGTTGCCACTTGTTCAACTGTAAGTGCCAACCAAGTTGAAGGGGCGGGTGAAGGGACGTTAGCACATGCCAATGACTCTTCCGATGTTTTCCGGAGATGGGGTTGTACGGATAATGATATTGCAAAGATCTTTGCACGTGGGCCTTCTTTGCTCAGGAGTGACTTGAACCAACTACAAAACAAACTCCATCTGCTAAAAGGCCTAGGCATCACATCTCCTGACCTGGTGAAGATCATCAATTGTCGCCCTCGGTTCCTCAAATGTCGGATCAACAACAACTTCCATGAGAGGATTGCGTTTTTCTTGAAAATTTTTGAATCTAAGGAAGTTCTTATTAAAGCCATTGTAAGAAACCCCTCACTTCTGACCTATGATTTCCATAATAGAATCAAACCGGTAATTTCGCTGTATGAAGAAATGGGGCTTAGTAAAAAGGATTTGATACTTATGCTTATATCTCGCCCCTCATTGATCCCAAGAAGTTCATTTAATGATGAAAAGTTGAAGTACATACAAAAAACAGGGCTCTCAAAGGGTGATAAAATGTACAAATATGTTGTTACAATTATGGGTATCTCACGGCTTGAAACGATCCGTCAAAAGGTTGCCAATTTGGAAAAGTTTGGTTTCACAGATGATGAGATTTTTGCTCTTCTAGGACGATCTCCCCTTATCTTGACTCTATCAGTTGATAAAGTGCAAAGGAACATGACTTTCATCTTATGCACGTTGAAGTTACCTGCTAAAGTTATTCTTAGCTATCCATTTTTATTTTATTTTAACTTGGATGCTATCTTGAAGCCACGGGTGCTTCTCTCTGGGAAGATGGAGGAAATGGGTCTGCATTTGCAGATCAAAGGCCATGCTATGCTCAGGGCCCTTCGGATGACAGAGAAAAGGTTCTTGAAGACATTTGTAAACAGCCAACCAAAAGATGTCGCTGATGAGTTGATGGAGTTCTATCAAAGTGCAAAAGGCATCAAGCGTTTGGCAGAAACCTCAAAGAAGAACTGCTGTAGGGGATTTCCTTTC

mRNA sequence

ATGAAAACAAAAGTCGAGGCTTTTTTCAAGCTCCGGTATTTACTATGTTCGAGGCAAGCATTTGCTTCCATTTTGAGAAAACAACCTCTAGAAACTTCGCAAAACTTAAGGGTTGCCACTTGTTCAACTGTAAGTGCCAACCAAGTTGAAGGGGCGGGTGAAGGGACGTTAGCACATGCCAATGACTCTTCCGATGTTTTCCGGAGATGGGGTTGTACGGATAATGATATTGCAAAGATCTTTGCACGTGGGCCTTCTTTGCTCAGGAGTGACTTGAACCAACTACAAAACAAACTCCATCTGCTAAAAGGCCTAGGCATCACATCTCCTGACCTGGTGAAGATCATCAATTGTCGCCCTCGGTTCCTCAAATGTCGGATCAACAACAACTTCCATGAGAGGATTGCGTTTTTCTTGAAAATTTTTGAATCTAAGGAAGTTCTTATTAAAGCCATTGTAAGAAACCCCTCACTTCTGACCTATGATTTCCATAATAGAATCAAACCGGTAATTTCGCTGTATGAAGAAATGGGGCTTAGTAAAAAGGATTTGATACTTATGCTTATATCTCGCCCCTCATTGATCCCAAGAAGTTCATTTAATGATGAAAAGTTGAAGTACATACAAAAAACAGGGCTCTCAAAGGGTGATAAAATGTACAAATATGTTGTTACAATTATGGGTATCTCACGGCTTGAAACGATCCGTCAAAAGGTTGCCAATTTGGAAAAGTTTGGTTTCACAGATGATGAGATTTTTGCTCTTCTAGGACGATCTCCCCTTATCTTGACTCTATCAGTTGATAAAGTGCAAAGGAACATGACTTTCATCTTATGCACGTTGAAGTTACCTGCTAAAGTTATTCTTAGCTATCCATTTTTATTTTATTTTAACTTGGATGCTATCTTGAAGCCACGGGTGCTTCTCTCTGGGAAGATGGAGGAAATGGGTCTGCATTTGCAGATCAAAGGCCATGCTATGCTCAGGGCCCTTCGGATGACAGAGAAAAGGTTCTTGAAGACATTTGTAAACAGCCAACCAAAAGATGTCGCTGATGAGTTGATGGAGTTCTATCAAAGTGCAAAAGGCATCAAGCGTTTGGCAGAAACCTCAAAGAAGAACTGCTGTAGGGGATTTCCTTTC

Coding sequence (CDS)

ATGAAAACAAAAGTCGAGGCTTTTTTCAAGCTCCGGTATTTACTATGTTCGAGGCAAGCATTTGCTTCCATTTTGAGAAAACAACCTCTAGAAACTTCGCAAAACTTAAGGGTTGCCACTTGTTCAACTGTAAGTGCCAACCAAGTTGAAGGGGCGGGTGAAGGGACGTTAGCACATGCCAATGACTCTTCCGATGTTTTCCGGAGATGGGGTTGTACGGATAATGATATTGCAAAGATCTTTGCACGTGGGCCTTCTTTGCTCAGGAGTGACTTGAACCAACTACAAAACAAACTCCATCTGCTAAAAGGCCTAGGCATCACATCTCCTGACCTGGTGAAGATCATCAATTGTCGCCCTCGGTTCCTCAAATGTCGGATCAACAACAACTTCCATGAGAGGATTGCGTTTTTCTTGAAAATTTTTGAATCTAAGGAAGTTCTTATTAAAGCCATTGTAAGAAACCCCTCACTTCTGACCTATGATTTCCATAATAGAATCAAACCGGTAATTTCGCTGTATGAAGAAATGGGGCTTAGTAAAAAGGATTTGATACTTATGCTTATATCTCGCCCCTCATTGATCCCAAGAAGTTCATTTAATGATGAAAAGTTGAAGTACATACAAAAAACAGGGCTCTCAAAGGGTGATAAAATGTACAAATATGTTGTTACAATTATGGGTATCTCACGGCTTGAAACGATCCGTCAAAAGGTTGCCAATTTGGAAAAGTTTGGTTTCACAGATGATGAGATTTTTGCTCTTCTAGGACGATCTCCCCTTATCTTGACTCTATCAGTTGATAAAGTGCAAAGGAACATGACTTTCATCTTATGCACGTTGAAGTTACCTGCTAAAGTTATTCTTAGCTATCCATTTTTATTTTATTTTAACTTGGATGCTATCTTGAAGCCACGGGTGCTTCTCTCTGGGAAGATGGAGGAAATGGGTCTGCATTTGCAGATCAAAGGCCATGCTATGCTCAGGGCCCTTCGGATGACAGAGAAAAGGTTCTTGAAGACATTTGTAAACAGCCAACCAAAAGATGTCGCTGATGAGTTGATGGAGTTCTATCAAAGTGCAAAAGGCATCAAGCGTTTGGCAGAAACCTCAAAGAAGAACTGCTGTAGGGGATTTCCTTTC

Protein sequence

MKTKVEAFFKLRYLLCSRQAFASILRKQPLETSQNLRVATCSTVSANQVEGAGEGTLAHANDSSDVFRRWGCTDNDIAKIFARGPSLLRSDLNQLQNKLHLLKGLGITSPDLVKIINCRPRFLKCRINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGLSKKDLILMLISRPSLIPRSSFNDEKLKYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKVANLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILSYPFLFYFNLDAILKPRVLLSGKMEEMGLHLQIKGHAMLRALRMTEKRFLKTFVNSQPKDVADELMEFYQSAKGIKRLAETSKKNCCRGFPF

Homology

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BLAST of MS011392 vs. NCBI nr
Match: XP_022133358.1 (uncharacterized protein LOC111005954 [Momordica charantia])

HSP 1 Score: 741.5 bits (1913), Expect = 3.6e-210
Identity = 379/381 (99.48%), Postives = 379/381 (99.48%), Query Frame = 0


Query: 1   MKTKVEAFFKLRYLLCSRQAFASILRKQPLETSQNLRVATCSTVSANQVEGAGEGTLAHA 60
           MKTKVEAFFKLRYL CSRQAFASILRKQPLETSQNLRVATCSTVSANQVEGAGEGTLAHA
Sbjct: 1   MKTKVEAFFKLRYLQCSRQAFASILRKQPLETSQNLRVATCSTVSANQVEGAGEGTLAHA 60

Query: 61  NDSSDVFRRWGCTDNDIAKIFARGPSLLRSDLNQLQNKLHLLKGLGITSPDLVKIINCRP 120
           NDSSDVFRRWGCTDNDIAKIFARGPSLLRSDLNQLQNKLHLLKGLGITSPDLVKIINCRP
Sbjct: 61  NDSSDVFRRWGCTDNDIAKIFARGPSLLRSDLNQLQNKLHLLKGLGITSPDLVKIINCRP 120

Query: 121 RFLKCRINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGLS 180
           RFLKCRINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGLS
Sbjct: 121 RFLKCRINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGLS 180

Query: 181 KKDLILMLISRPSLIPRSSFNDEKLKYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKVA 240
           KKDLILMLISRPSLIPRSSFNDEKLKYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKVA
Sbjct: 181 KKDLILMLISRPSLIPRSSFNDEKLKYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKVA 240

Query: 241 NLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILSYPFLFYFNLD 300
           NLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILSYPFLFYFNLD
Sbjct: 241 NLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILSYPFLFYFNLD 300

Query: 301 AILKPRVLLSGKMEEMGLHLQIKGHAMLRALRMTEKRFLKTFVNSQPKDVADELMEFYQS 360
           AILKPRVLLSGKMEEMGLHLQIKGHAMLRALRMTEKRFLKTFVNSQPKDVADELMEFYQS
Sbjct: 301 AILKPRVLLSGKMEEMGLHLQIKGHAMLRALRMTEKRFLKTFVNSQPKDVADELMEFYQS 360

Query: 361 AKGIKRLAETSKKNCCRGFPF 382
           AKGIKRLAETSKKNC RGFPF
Sbjct: 361 AKGIKRLAETSKKNCSRGFPF 381

[Close]

BLAST of MS011392 vs. NCBI nr
Match: XP_022158121.1 (uncharacterized protein LOC111024679 [Momordica charantia])

HSP 1 Score: 715.3 bits (1845), Expect = 2.8e-202
Identity = 362/381 (95.01%), Postives = 372/381 (97.64%), Query Frame = 0


Query: 1   MKTKVEAFFKLRYLLCSRQAFASILRKQPLETSQNLRVATCSTVSANQVEGAGEGTLAHA 60
           MKTKVEAFFKLRYLLCSRQAFASILR QPLE SQNLRVATCSTVSANQVEG G+GTLAHA
Sbjct: 1   MKTKVEAFFKLRYLLCSRQAFASILRNQPLEASQNLRVATCSTVSANQVEGVGKGTLAHA 60

Query: 61  NDSSDVFRRWGCTDNDIAKIFARGPSLLRSDLNQLQNKLHLLKGLGITSPDLVKIINCRP 120
           NDSS+VFRRWGCTDNDIAKIFARGPSL RSDL QLQNKLHLLKGLGITSPDLVKIINCRP
Sbjct: 61  NDSSEVFRRWGCTDNDIAKIFARGPSLRRSDLKQLQNKLHLLKGLGITSPDLVKIINCRP 120

Query: 121 RFLKCRINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGLS 180
           RFLKCRINNNFH+RI FFLK+FESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGLS
Sbjct: 121 RFLKCRINNNFHDRIEFFLKMFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGLS 180

Query: 181 KKDLILMLISRPSLIPRSSFNDEKLKYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKVA 240
           KKDLILMLISRP+LIPRSSFNDEKL+YIQKTGLSKGDKMYKYVVTIMGISRLETIRQKVA
Sbjct: 181 KKDLILMLISRPTLIPRSSFNDEKLEYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKVA 240

Query: 241 NLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILSYPFLFYFNLD 300
           NLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVIL+YPFL YFNL+
Sbjct: 241 NLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLE 300

Query: 301 AILKPRVLLSGKMEEMGLHLQIKGHAMLRALRMTEKRFLKTFVNSQPKDVADELMEFYQS 360
           A+LKPRVLLSGKMEEMGLHLQIKG AMLRALRMTEKRFLKTFVNSQPK VADELMEFYQS
Sbjct: 301 AVLKPRVLLSGKMEEMGLHLQIKGRAMLRALRMTEKRFLKTFVNSQPKVVADELMEFYQS 360

Query: 361 AKGIKRLAETSKKNCCRGFPF 382
           AKG+KRLAETSKKNCCRGFPF
Sbjct: 361 AKGVKRLAETSKKNCCRGFPF 381

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BLAST of MS011392 vs. NCBI nr
Match: XP_038881817.1 (uncharacterized protein LOC120073205, partial [Benincasa hispida])

HSP 1 Score: 606.3 bits (1562), Expect = 1.8e-169
Identity = 309/364 (84.89%), Postives = 333/364 (91.48%), Query Frame = 0


Query: 19  QAFASILRKQPLETSQNLRVATCSTVSANQVE-GAGEGTLAHANDSSDVFRRWGCTDNDI 78
           QAF SIL  QPLE  Q L+VATCSTVS  QVE   GEG LAHAND ++VFRRWGCTDNDI
Sbjct: 49  QAFVSILVSQPLEAWQTLKVATCSTVSVKQVEKEVGEGALAHANDFTEVFRRWGCTDNDI 108

Query: 79  AKIFARGPSLLRSDLNQLQNKLHLLKGLGITSPDLVKIINCRPRFLKCRINNNFHERIAF 138
           A+IFARGPSL RSDLNQLQNKLHLL+GLGITSPDLVKIINCRPRFLKC INNNFHE+I  
Sbjct: 109 AQIFARGPSLRRSDLNQLQNKLHLLQGLGITSPDLVKIINCRPRFLKCWINNNFHEQIES 168

Query: 139 FLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGLSKKDLILMLISRPSLIPR 198
           FLKIFESKEVL+KAIVRNPSLLTYDFH+R+K VIS YEEMGLSKKDLILMLISRP+LIPR
Sbjct: 169 FLKIFESKEVLVKAIVRNPSLLTYDFHSRVKSVISQYEEMGLSKKDLILMLISRPTLIPR 228

Query: 199 SSFNDEKLKYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKVANLEKFGFTDDEIFALLG 258
           +SFNDEK++YIQKTGLS+GDKM+KYVVTI+GISRLETIR KVANLEKFGFT+DEIFALLG
Sbjct: 229 TSFNDEKMEYIQKTGLSQGDKMFKYVVTIIGISRLETIRHKVANLEKFGFTEDEIFALLG 288

Query: 259 RSPLILTLSVDKVQRNMTFILCTLKLPAKVILSYPFLFYFNLDAILKPRVLLSGKMEEMG 318
           RSPLILTLSVDKVQRNMTFILCTLKLPAKVIL+YPFL YFNLDA+LKPRV L GKMEEMG
Sbjct: 289 RSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLDAVLKPRVHLLGKMEEMG 348

Query: 319 LHLQIKGHAMLRALRMTEKRFLKTFVNSQPKDVADELMEFYQSAKGIKRLAETSKKNCCR 378
           LH+QIKGH +LRALRMTEKRFLK F+ SQPKDVADELM+FYQ AKGIKRL ETS+K   R
Sbjct: 349 LHMQIKGHPLLRALRMTEKRFLKKFIYSQPKDVADELMQFYQIAKGIKRLGETSRKISYR 408

Query: 379 GFPF 382
           GFPF
Sbjct: 409 GFPF 412

[Close]

BLAST of MS011392 vs. NCBI nr
Match: XP_022978595.1 (uncharacterized protein LOC111478530 isoform X2 [Cucurbita maxima])

HSP 1 Score: 599.0 bits (1543), Expect = 2.9e-167
Identity = 310/382 (81.15%), Postives = 341/382 (89.27%), Query Frame = 0


Query: 1   MKTKVEAFFKLRYLLCSRQAFASILRKQPLETSQNLRVATCSTVSANQV-EGAGEGTLAH 60
           MK++    FKL YLL SRQAFASIL       +Q L+VA+CSTVSA QV E  GEG LAH
Sbjct: 1   MKSRAVGCFKLCYLLPSRQAFASIL------VNQKLKVASCSTVSAKQVEEEVGEGPLAH 60

Query: 61  ANDSSDVFRRWGCTDNDIAKIFARGPSLLRSDLNQLQNKLHLLKGLGITSPDLVKIINCR 120
           ANDS++VFRRWGC D+DIA+IFARGPSL RSDLNQLQ+KL LL+GLGITSPDLVKIINC 
Sbjct: 61  ANDSTEVFRRWGCADDDIAQIFARGPSLRRSDLNQLQDKLQLLQGLGITSPDLVKIINCY 120

Query: 121 PRFLKCRINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGL 180
           PRFLKCRINNNFHERI FFLK+FESKEVLIKAIVRNP LLT DFHN+IKP IS YEE+GL
Sbjct: 121 PRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVRNPLLLTSDFHNKIKPAISQYEELGL 180

Query: 181 SKKDLILMLISRPSLIPRSSFNDEKLKYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKV 240
           S+KDLILML+SRP+LIPRSSFNDEK+ YIQKTGL+ GDKMYKY+VTI+GISRLETIRQKV
Sbjct: 181 SRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKYIVTIIGISRLETIRQKV 240

Query: 241 ANLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILSYPFLFYFNL 300
           ANLEKFGFT+DE F LLGRSPLILTLSVDKVQRNMTFILCTL+LPAK+IL+YPFL Y NL
Sbjct: 241 ANLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCTLRLPAKIILNYPFLVYLNL 300

Query: 301 DAILKPRVLLSGKMEEMGLHLQIKGHAMLRALRMTEKRFLKTFVNSQPKDVADELMEFYQ 360
           + +LKPRVLLS KMEEMGLH+QIKG  MLRALRMTEKRFLK FVNSQPKDVADELM+FYQ
Sbjct: 301 EEVLKPRVLLSEKMEEMGLHIQIKGGLMLRALRMTEKRFLKRFVNSQPKDVADELMQFYQ 360

Query: 361 SAKGIKRLAETSKKNCCRGFPF 382
           SAKGIKRLAETS+K+  RGFPF
Sbjct: 361 SAKGIKRLAETSRKSHRRGFPF 376

[Close]

BLAST of MS011392 vs. NCBI nr
Match: XP_022978594.1 (uncharacterized protein LOC111478530 isoform X1 [Cucurbita maxima])

HSP 1 Score: 599.0 bits (1543), Expect = 2.9e-167
Identity = 310/382 (81.15%), Postives = 341/382 (89.27%), Query Frame = 0


Query: 1   MKTKVEAFFKLRYLLCSRQAFASILRKQPLETSQNLRVATCSTVSANQV-EGAGEGTLAH 60
           MK++    FKL YLL SRQAFASIL       +Q L+VA+CSTVSA QV E  GEG LAH
Sbjct: 73  MKSRAVGCFKLCYLLPSRQAFASIL------VNQKLKVASCSTVSAKQVEEEVGEGPLAH 132

Query: 61  ANDSSDVFRRWGCTDNDIAKIFARGPSLLRSDLNQLQNKLHLLKGLGITSPDLVKIINCR 120
           ANDS++VFRRWGC D+DIA+IFARGPSL RSDLNQLQ+KL LL+GLGITSPDLVKIINC 
Sbjct: 133 ANDSTEVFRRWGCADDDIAQIFARGPSLRRSDLNQLQDKLQLLQGLGITSPDLVKIINCY 192

Query: 121 PRFLKCRINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGL 180
           PRFLKCRINNNFHERI FFLK+FESKEVLIKAIVRNP LLT DFHN+IKP IS YEE+GL
Sbjct: 193 PRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVRNPLLLTSDFHNKIKPAISQYEELGL 252

Query: 181 SKKDLILMLISRPSLIPRSSFNDEKLKYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKV 240
           S+KDLILML+SRP+LIPRSSFNDEK+ YIQKTGL+ GDKMYKY+VTI+GISRLETIRQKV
Sbjct: 253 SRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKYIVTIIGISRLETIRQKV 312

Query: 241 ANLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILSYPFLFYFNL 300
           ANLEKFGFT+DE F LLGRSPLILTLSVDKVQRNMTFILCTL+LPAK+IL+YPFL Y NL
Sbjct: 313 ANLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCTLRLPAKIILNYPFLVYLNL 372

Query: 301 DAILKPRVLLSGKMEEMGLHLQIKGHAMLRALRMTEKRFLKTFVNSQPKDVADELMEFYQ 360
           + +LKPRVLLS KMEEMGLH+QIKG  MLRALRMTEKRFLK FVNSQPKDVADELM+FYQ
Sbjct: 373 EEVLKPRVLLSEKMEEMGLHIQIKGGLMLRALRMTEKRFLKRFVNSQPKDVADELMQFYQ 432

Query: 361 SAKGIKRLAETSKKNCCRGFPF 382
           SAKGIKRLAETS+K+  RGFPF
Sbjct: 433 SAKGIKRLAETSRKSHRRGFPF 448

[Close]

BLAST of MS011392 vs. ExPASy Swiss-Prot
Match: Q9VPD5 (Transcription termination factor 3, mitochondrial OS=Drosophila melanogaster OX=7227 GN=mTerf3 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.4e-07
Identity = 35/126 (27.78%), Postives = 64/126 (50.79%), Query Frame = 0


Query: 71  GCTDNDIAKIFARGPSLLRSDLNQLQNKLHLLKGLGITSPDLVKIINCRPRFLKCRINNN 130
           G + +D  ++F + P L + DL+ LQ +++ LK    +     +I+   P +L       
Sbjct: 136 GVSPDDFGRMFTKNPLLFKEDLDDLQTRVNYLKSKRFSDEARQRILTQNPYWLMFS-TRR 195

Query: 131 FHERIAFFLKIFE-SKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGLSKKDLILMLI 190
              R+ +F K F+ S   L     R P+ +TY+  +  K V +L EEMG + K+L  +++
Sbjct: 196 VDRRLGYFQKEFKLSGHDLRLLATREPNAITYNMEHLRKSVFTLKEEMGFNAKELSDLVV 255

Query: 191 SRPSLI 196
            +P L+
Sbjct: 256 RKPRLL 260

[Close]

BLAST of MS011392 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 3.9e-05
Identity = 61/304 (20.07%), Postives = 135/304 (44.41%), Query Frame = 0


Query: 67  FRRWGCTDNDIAKIFARGPSLLRSDLN-QLQNKLHLLKGLGITSPDLVKIINCRPRFLKC 126
           FR  G  D  I K+  +   L ++  +   +N  +L   +GI    L  I++  P+ L  
Sbjct: 13  FRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVSRCPKILTL 72

Query: 127 RINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGLSKKDLI 186
           R++      +     +  +   +  AI + P +L++    ++ P+++ ++ +G+ +  L 
Sbjct: 73  RLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLG 132

Query: 187 LMLISRPSLIPRSSFNDEKL----KYIQKTGLSKGDKMYKYVVT---IMGISRLETIRQK 246
            M++  P LI  S   D KL     ++   GL +   + K +V    +MG S  + +R  
Sbjct: 133 KMILFNPRLISYSI--DTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPT 192

Query: 247 VANLE-KFGFTDDEIFALLGRSPLILTLSVDKVQR-NMTFIL-CTL--KLPAKVILSYPF 306
              L+   G ++D I +++   P +L   V+K+ + N  ++  C       A ++  YP 
Sbjct: 193 TEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQ 252

Query: 307 LFYFNLDAILKPRV-----LLSGKMEEMGLHLQIKGHAMLRALRMTEKRFLKTFVNSQPK 353
           +   ++   L+PR+     ++   M+E+  + +   H + + +    K   K  ++   +
Sbjct: 253 ILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLR 312

[Close]

BLAST of MS011392 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.1e-04
Identity = 45/164 (27.44%), Postives = 82/164 (50.00%), Query Frame = 0


Query: 149 IKAIVRN-PSLLTYDFHNRIKPVISLYEEMGLSKKDLILMLISRPSLIPRSSFNDEK--L 208
           IK I R   +   Y    +IKPV+    ++G+ K D+  +L  RP +   S  ++ K  +
Sbjct: 213 IKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTM 272

Query: 209 KYIQKTGLSKGD--KMYKYVVTIMGISRLETIRQKVANLEKFGFTDDEIFALLGRSPLIL 268
            +++  G+ K    K+      I+  SR + +   V  L + G T+++I  +L R P I+
Sbjct: 273 AFLETLGIDKNQWAKIISRFPAILTYSR-QKLTSTVEFLSQTGLTEEQIGRILTRCPNIM 332

Query: 269 TLSV-DKVQRNMTFILCTLKLPAKVIL-SYPFLFYFNLDAILKP 306
           + SV DK++  M +   +L +   V+L   P  F  ++++ LKP
Sbjct: 333 SYSVEDKLRPTMEYFR-SLNVDVAVLLHRCPQTFGLSIESNLKP 374

[Close]

BLAST of MS011392 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 9.5e-04
Identity = 40/120 (33.33%), Postives = 62/120 (51.67%), Query Frame = 0


Query: 73  TDNDIAKIFARGPSLLRSDLN-QLQNKLHLLKGLG------ITSPDLVKIINCRPRFLKC 132
           ++ DI K  +R P LL S ++ QL+  L  LK LG      ITS + V +++   R L  
Sbjct: 115 SEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRDTITSRNTVLLVSNVERTLIP 174

Query: 133 RINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLY-EEMGLSKKDL 185
           +I     E + F      ++E + K +VR+P+LLTY   N + P +  + EEM    K+L
Sbjct: 175 KI-EYLEEGLGF------TREEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKEL 227

[Close]

BLAST of MS011392 vs. ExPASy TrEMBL
Match: A0A6J1BYX5 (uncharacterized protein LOC111005954 OS=Momordica charantia OX=3673 GN=LOC111005954 PE=3 SV=1)

HSP 1 Score: 741.5 bits (1913), Expect = 1.8e-210
Identity = 379/381 (99.48%), Postives = 379/381 (99.48%), Query Frame = 0


Query: 1   MKTKVEAFFKLRYLLCSRQAFASILRKQPLETSQNLRVATCSTVSANQVEGAGEGTLAHA 60
           MKTKVEAFFKLRYL CSRQAFASILRKQPLETSQNLRVATCSTVSANQVEGAGEGTLAHA
Sbjct: 1   MKTKVEAFFKLRYLQCSRQAFASILRKQPLETSQNLRVATCSTVSANQVEGAGEGTLAHA 60

Query: 61  NDSSDVFRRWGCTDNDIAKIFARGPSLLRSDLNQLQNKLHLLKGLGITSPDLVKIINCRP 120
           NDSSDVFRRWGCTDNDIAKIFARGPSLLRSDLNQLQNKLHLLKGLGITSPDLVKIINCRP
Sbjct: 61  NDSSDVFRRWGCTDNDIAKIFARGPSLLRSDLNQLQNKLHLLKGLGITSPDLVKIINCRP 120

Query: 121 RFLKCRINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGLS 180
           RFLKCRINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGLS
Sbjct: 121 RFLKCRINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGLS 180

Query: 181 KKDLILMLISRPSLIPRSSFNDEKLKYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKVA 240
           KKDLILMLISRPSLIPRSSFNDEKLKYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKVA
Sbjct: 181 KKDLILMLISRPSLIPRSSFNDEKLKYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKVA 240

Query: 241 NLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILSYPFLFYFNLD 300
           NLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILSYPFLFYFNLD
Sbjct: 241 NLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILSYPFLFYFNLD 300

Query: 301 AILKPRVLLSGKMEEMGLHLQIKGHAMLRALRMTEKRFLKTFVNSQPKDVADELMEFYQS 360
           AILKPRVLLSGKMEEMGLHLQIKGHAMLRALRMTEKRFLKTFVNSQPKDVADELMEFYQS
Sbjct: 301 AILKPRVLLSGKMEEMGLHLQIKGHAMLRALRMTEKRFLKTFVNSQPKDVADELMEFYQS 360

Query: 361 AKGIKRLAETSKKNCCRGFPF 382
           AKGIKRLAETSKKNC RGFPF
Sbjct: 361 AKGIKRLAETSKKNCSRGFPF 381

[Close]

BLAST of MS011392 vs. ExPASy TrEMBL
Match: A0A6J1E035 (uncharacterized protein LOC111024679 OS=Momordica charantia OX=3673 GN=LOC111024679 PE=3 SV=1)

HSP 1 Score: 715.3 bits (1845), Expect = 1.4e-202
Identity = 362/381 (95.01%), Postives = 372/381 (97.64%), Query Frame = 0


Query: 1   MKTKVEAFFKLRYLLCSRQAFASILRKQPLETSQNLRVATCSTVSANQVEGAGEGTLAHA 60
           MKTKVEAFFKLRYLLCSRQAFASILR QPLE SQNLRVATCSTVSANQVEG G+GTLAHA
Sbjct: 1   MKTKVEAFFKLRYLLCSRQAFASILRNQPLEASQNLRVATCSTVSANQVEGVGKGTLAHA 60

Query: 61  NDSSDVFRRWGCTDNDIAKIFARGPSLLRSDLNQLQNKLHLLKGLGITSPDLVKIINCRP 120
           NDSS+VFRRWGCTDNDIAKIFARGPSL RSDL QLQNKLHLLKGLGITSPDLVKIINCRP
Sbjct: 61  NDSSEVFRRWGCTDNDIAKIFARGPSLRRSDLKQLQNKLHLLKGLGITSPDLVKIINCRP 120

Query: 121 RFLKCRINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGLS 180
           RFLKCRINNNFH+RI FFLK+FESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGLS
Sbjct: 121 RFLKCRINNNFHDRIEFFLKMFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGLS 180

Query: 181 KKDLILMLISRPSLIPRSSFNDEKLKYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKVA 240
           KKDLILMLISRP+LIPRSSFNDEKL+YIQKTGLSKGDKMYKYVVTIMGISRLETIRQKVA
Sbjct: 181 KKDLILMLISRPTLIPRSSFNDEKLEYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKVA 240

Query: 241 NLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILSYPFLFYFNLD 300
           NLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVIL+YPFL YFNL+
Sbjct: 241 NLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILNYPFLLYFNLE 300

Query: 301 AILKPRVLLSGKMEEMGLHLQIKGHAMLRALRMTEKRFLKTFVNSQPKDVADELMEFYQS 360
           A+LKPRVLLSGKMEEMGLHLQIKG AMLRALRMTEKRFLKTFVNSQPK VADELMEFYQS
Sbjct: 301 AVLKPRVLLSGKMEEMGLHLQIKGRAMLRALRMTEKRFLKTFVNSQPKVVADELMEFYQS 360

Query: 361 AKGIKRLAETSKKNCCRGFPF 382
           AKG+KRLAETSKKNCCRGFPF
Sbjct: 361 AKGVKRLAETSKKNCCRGFPF 381

[Close]

BLAST of MS011392 vs. ExPASy TrEMBL
Match: A0A6J1IQK9 (uncharacterized protein LOC111478530 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478530 PE=3 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 1.4e-167
Identity = 310/382 (81.15%), Postives = 341/382 (89.27%), Query Frame = 0


Query: 1   MKTKVEAFFKLRYLLCSRQAFASILRKQPLETSQNLRVATCSTVSANQV-EGAGEGTLAH 60
           MK++    FKL YLL SRQAFASIL       +Q L+VA+CSTVSA QV E  GEG LAH
Sbjct: 1   MKSRAVGCFKLCYLLPSRQAFASIL------VNQKLKVASCSTVSAKQVEEEVGEGPLAH 60

Query: 61  ANDSSDVFRRWGCTDNDIAKIFARGPSLLRSDLNQLQNKLHLLKGLGITSPDLVKIINCR 120
           ANDS++VFRRWGC D+DIA+IFARGPSL RSDLNQLQ+KL LL+GLGITSPDLVKIINC 
Sbjct: 61  ANDSTEVFRRWGCADDDIAQIFARGPSLRRSDLNQLQDKLQLLQGLGITSPDLVKIINCY 120

Query: 121 PRFLKCRINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGL 180
           PRFLKCRINNNFHERI FFLK+FESKEVLIKAIVRNP LLT DFHN+IKP IS YEE+GL
Sbjct: 121 PRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVRNPLLLTSDFHNKIKPAISQYEELGL 180

Query: 181 SKKDLILMLISRPSLIPRSSFNDEKLKYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKV 240
           S+KDLILML+SRP+LIPRSSFNDEK+ YIQKTGL+ GDKMYKY+VTI+GISRLETIRQKV
Sbjct: 181 SRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKYIVTIIGISRLETIRQKV 240

Query: 241 ANLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILSYPFLFYFNL 300
           ANLEKFGFT+DE F LLGRSPLILTLSVDKVQRNMTFILCTL+LPAK+IL+YPFL Y NL
Sbjct: 241 ANLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCTLRLPAKIILNYPFLVYLNL 300

Query: 301 DAILKPRVLLSGKMEEMGLHLQIKGHAMLRALRMTEKRFLKTFVNSQPKDVADELMEFYQ 360
           + +LKPRVLLS KMEEMGLH+QIKG  MLRALRMTEKRFLK FVNSQPKDVADELM+FYQ
Sbjct: 301 EEVLKPRVLLSEKMEEMGLHIQIKGGLMLRALRMTEKRFLKRFVNSQPKDVADELMQFYQ 360

Query: 361 SAKGIKRLAETSKKNCCRGFPF 382
           SAKGIKRLAETS+K+  RGFPF
Sbjct: 361 SAKGIKRLAETSRKSHRRGFPF 376

[Close]

BLAST of MS011392 vs. ExPASy TrEMBL
Match: A0A6J1IUG6 (uncharacterized protein LOC111478530 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478530 PE=3 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 1.4e-167
Identity = 310/382 (81.15%), Postives = 341/382 (89.27%), Query Frame = 0


Query: 1   MKTKVEAFFKLRYLLCSRQAFASILRKQPLETSQNLRVATCSTVSANQV-EGAGEGTLAH 60
           MK++    FKL YLL SRQAFASIL       +Q L+VA+CSTVSA QV E  GEG LAH
Sbjct: 73  MKSRAVGCFKLCYLLPSRQAFASIL------VNQKLKVASCSTVSAKQVEEEVGEGPLAH 132

Query: 61  ANDSSDVFRRWGCTDNDIAKIFARGPSLLRSDLNQLQNKLHLLKGLGITSPDLVKIINCR 120
           ANDS++VFRRWGC D+DIA+IFARGPSL RSDLNQLQ+KL LL+GLGITSPDLVKIINC 
Sbjct: 133 ANDSTEVFRRWGCADDDIAQIFARGPSLRRSDLNQLQDKLQLLQGLGITSPDLVKIINCY 192

Query: 121 PRFLKCRINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGL 180
           PRFLKCRINNNFHERI FFLK+FESKEVLIKAIVRNP LLT DFHN+IKP IS YEE+GL
Sbjct: 193 PRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVRNPLLLTSDFHNKIKPAISQYEELGL 252

Query: 181 SKKDLILMLISRPSLIPRSSFNDEKLKYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKV 240
           S+KDLILML+SRP+LIPRSSFNDEK+ YIQKTGL+ GDKMYKY+VTI+GISRLETIRQKV
Sbjct: 253 SRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKYIVTIIGISRLETIRQKV 312

Query: 241 ANLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILSYPFLFYFNL 300
           ANLEKFGFT+DE F LLGRSPLILTLSVDKVQRNMTFILCTL+LPAK+IL+YPFL Y NL
Sbjct: 313 ANLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCTLRLPAKIILNYPFLVYLNL 372

Query: 301 DAILKPRVLLSGKMEEMGLHLQIKGHAMLRALRMTEKRFLKTFVNSQPKDVADELMEFYQ 360
           + +LKPRVLLS KMEEMGLH+QIKG  MLRALRMTEKRFLK FVNSQPKDVADELM+FYQ
Sbjct: 373 EEVLKPRVLLSEKMEEMGLHIQIKGGLMLRALRMTEKRFLKRFVNSQPKDVADELMQFYQ 432

Query: 361 SAKGIKRLAETSKKNCCRGFPF 382
           SAKGIKRLAETS+K+  RGFPF
Sbjct: 433 SAKGIKRLAETSRKSHRRGFPF 448

[Close]

BLAST of MS011392 vs. ExPASy TrEMBL
Match: A0A6J1GFZ6 (uncharacterized protein LOC111453817 OS=Cucurbita moschata OX=3662 GN=LOC111453817 PE=3 SV=1)

HSP 1 Score: 585.1 bits (1507), Expect = 2.1e-163
Identity = 304/382 (79.58%), Postives = 338/382 (88.48%), Query Frame = 0


Query: 1   MKTKVEAFFKLRYLLCSRQAFASILRKQPLETSQNLRVATCSTVSANQV-EGAGEGTLAH 60
           MK++    FKL YLL SRQAFASIL       +Q L+VA+CSTVSA QV E  GE  LAH
Sbjct: 1   MKSRAVGCFKLCYLLSSRQAFASIL------VNQKLKVASCSTVSAKQVEEKVGERPLAH 60

Query: 61  ANDSSDVFRRWGCTDNDIAKIFARGPSLLRSDLNQLQNKLHLLKGLGITSPDLVKIINCR 120
           ANDS++VFRRWGC D+DIA+IFAR PSL RSDLN LQ+KL LL+G+GITSPDLVKIINC 
Sbjct: 61  ANDSTEVFRRWGCADDDIAQIFARRPSLRRSDLNLLQDKLQLLQGVGITSPDLVKIINCH 120

Query: 121 PRFLKCRINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGL 180
           PRFLK RINNNFHERI FFLK+FESKE LIKAIV+NP LLTYDFHN+IKP IS YEE+GL
Sbjct: 121 PRFLKGRINNNFHERIEFFLKMFESKEALIKAIVKNPLLLTYDFHNKIKPAISQYEELGL 180

Query: 181 SKKDLILMLISRPSLIPRSSFNDEKLKYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKV 240
           S+KDLILML+SRP+LIPRSSFNDEK+ YIQKTGL+ GDKMYKY+VTI+GISRLETIRQKV
Sbjct: 181 SRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKYIVTIIGISRLETIRQKV 240

Query: 241 ANLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILSYPFLFYFNL 300
           A+LEKFGFT+DE F LLGRSPLILTLSVDKVQRNMTFILCTLKLPAK IL+YPFL Y NL
Sbjct: 241 AHLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCTLKLPAKSILNYPFLLYLNL 300

Query: 301 DAILKPRVLLSGKMEEMGLHLQIKGHAMLRALRMTEKRFLKTFVNSQPKDVADELMEFYQ 360
           +A+LKPRVLLSGKMEEMGL +QIKG  MLRALRMTEKRFL++FVNSQPKDVADELM+FYQ
Sbjct: 301 EAVLKPRVLLSGKMEEMGLDIQIKGGLMLRALRMTEKRFLESFVNSQPKDVADELMQFYQ 360

Query: 361 SAKGIKRLAETSKKNCCRGFPF 382
           SAKGIKRLAETS+K+  RGFPF
Sbjct: 361 SAKGIKRLAETSRKSHRRGFPF 376

[Close]

BLAST of MS011392 vs. TAIR 10
Match: AT1G79220.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 355.5 bits (911), Expect = 5.2e-98
Identity = 174/316 (55.06%), Postives = 243/316 (76.90%), Query Frame = 0


Query: 66  VFRRWGCTDNDIAKIFARGPSLLRSDLNQLQNKLHLLKGLGITSPDLVKIINCRPRFLKC 125
           V RRWGC D++I+K+F R P+L R+++ QL+ KL LLK LGITS DLVKI+NCRPRF  C
Sbjct: 86  VLRRWGCDDDEISKLFTRRPALQRANVAQLEFKLSLLKPLGITSSDLVKILNCRPRFFSC 145

Query: 126 RINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGLSKKDLI 185
           R+     ERI +F++I  SKEVL + I+RNPSL+ YD  ++IKP I  Y+ +G S++DL+
Sbjct: 146 RL--VLDERINYFMEILGSKEVLRRVIIRNPSLMLYDLDDKIKPAIEYYKGLGFSQQDLV 205

Query: 186 LMLISRPSLIPRSSFNDEKLKYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKVANLEKF 245
            MLISRP+LIPR++FN+EK +YI+KTG+++  KM+KYV  I+G+SR+ETI +KV NLEKF
Sbjct: 206 AMLISRPTLIPRTNFNNEKFEYIEKTGVTRESKMFKYVAVIIGVSRMETIEEKVRNLEKF 265

Query: 246 GFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILSYPFLFYFNLDAILKP 305
           GF+++EI+ L G+ P++L+LSV+KVQRNMTF++ ++KLPA  ++ +P L   NL++ LKP
Sbjct: 266 GFSEEEIWHLYGKCPILLSLSVEKVQRNMTFVIASMKLPAHSVVKHPCLLLLNLESRLKP 325

Query: 306 RVLLSGKMEEMGLHLQIKGHAMLRALRMTEKRFLKTFVNSQPKDVADELMEFYQSAKGIK 365
           R  L  ++ EM L   IK  ++ RA+RM+EKRFLK +V   P+D+A ELMEFY+ +K +K
Sbjct: 326 RADLVKRVLEMRLKPLIKEVSIFRAVRMSEKRFLKVYVMCHPQDIATELMEFYEKSKNMK 385

Query: 366 RLAETSKKNCCRGFPF 382
           RLAE SKK   +GFPF
Sbjct: 386 RLAEKSKKYIRKGFPF 399

[Close]

BLAST of MS011392 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 74.3 bits (181), Expect = 2.3e-13
Identity = 71/303 (23.43%), Postives = 136/303 (44.88%), Query Frame = 0


Query: 66  VFRRWGCTDNDIAKIFARGPSLLRSDLNQ-LQNKLHLLKGLGITSPDLVKIINCRPRFLK 125
           + + +  +D  I K     P ++  ++ + L+ KL   K +G T   L K ++     + 
Sbjct: 77  MLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVG 136

Query: 126 CRINNNFHERIAFFLKIFESKEVLIKAIVRNPS--LLTYDFHNRIKPVISLYEEMGLSKK 185
             +       +     I   K   +  I+      LL+ D +  + P IS  E  G+   
Sbjct: 137 VSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGS 196

Query: 186 DLILMLISRPSLIPRSSFNDEKLK-YIQKT---GLSKGDKMYKYVVTIMGISRLETIRQK 245
            L  +L  +P +    + ++EKL+ Y+ +    G +   +M  + V  +     +T  +K
Sbjct: 197 QLASLLRRQPRIF---NLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRK 256

Query: 246 VANLEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILSYPFLFYFN 305
           V      GF++DEI  ++ RSP ++  S DK+     F L  + L  + +   P +  +N
Sbjct: 257 VKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYN 316

Query: 306 LDAILKPRVLLSGKMEEMGLHL--QIKGHAMLRALRMTEKRFLKTFVNSQPKDVADELME 360
           L+  + PR+ +   + E GL L  + K   M+  + MTE+ FL+ +V     ++A+EL+ 
Sbjct: 317 LEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEELLV 376

[Close]

BLAST of MS011392 vs. TAIR 10
Match: AT1G61990.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 73.6 bits (179), Expect = 4.0e-13
Identity = 61/270 (22.59%), Postives = 129/270 (47.78%), Query Frame = 0


Query: 66  VFRRWGCTDNDIAKIFARGPSLLRSDLNQ-LQNKLHLLKGLGITSPDLVKIINCRPRFLK 125
           +FR +G TD+ I+ I    P LL +D  + L  KL +L+  G +S ++ +I++  PR L 
Sbjct: 90  LFRSYGFTDSQISTIITDYPLLLVADAKKALGRKLQILQSRGASSSEITEIVSTVPRILG 149

Query: 126 CRINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGLSKKDL 185
            +    +++ +         K++++     +  L      N+I+ V +L  E+G+  + L
Sbjct: 150 KKSITVYYDAV---------KDIIVADTSSSYELPQGSQGNKIRNVSAL-RELGMPSRLL 209

Query: 186 ILMLISRPSLIPRSSFNDEKLKYIQKTGLSKGDKMYKYVVTIMGISRLETIRQKVANLEK 245
           + +L+S+   +      D  LK + + G       +   + ++     +TI +KV     
Sbjct: 210 LPLLVSKSQPVCGKENFDASLKKVVEMGFDPTTTKFVLALRMLYQMSEKTIEEKVVVFRS 269

Query: 246 FGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVIL---SYPFLFYFNLDA 305
            GFT D+++ +  ++P +L +S  K+ ++    L      A+ ++    YP    +++++
Sbjct: 270 LGFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVKRYPPCIEYSVES 329

Query: 306 ILKPRVLLSGKME----EMGLHLQIKGHAM 328
           + K    L  KM+     + LH Q+ G++M
Sbjct: 330 VKKKNEFLVKKMKWPRNALVLHPQVFGYSM 349

[Close]

BLAST of MS011392 vs. TAIR 10
Match: AT5G23930.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 66.6 bits (161), Expect = 4.8e-11
Identity = 83/357 (23.25%), Postives = 151/357 (42.30%), Query Frame = 0


Query: 66  VFRRWGCTDNDIAKIFARGPS-LLRSDLNQLQNKLHLLKGLGITSPDLVKIINCRPRFL- 125
           + R +G  D+ I+ I +  P  L+ +    L+ KLH LK  G +S +L +I++  P+ L 
Sbjct: 93  LLRSYGFKDSQISSIISTYPRFLIENPEKTLRAKLHFLKLNGASSSELTEIVSKVPKILG 152

Query: 126 -----------------------------KCRINNNFH----------ERIAFFLKIFES 185
                                        + + N N +          +R+   L I  +
Sbjct: 153 KRGGKWISHYYDYVKEILQDQDSSSSSSKRKQTNRNRNVSVLRKLGVPQRLLLNLLISRA 212

Query: 186 KEVL--------IKAIVR-----------NPSLLTYDFHNR-IKPVISLYEEMGLSKKDL 245
           K V         +K IV            N   + Y+  ++ I+  ++ Y  +GLS  ++
Sbjct: 213 KPVCGKERFEESVKKIVEMGFDPKSPKFVNALYVFYELSDKTIEEKVNAYIRLGLSVNEV 272

Query: 246 ILMLISRPSLIPRSSFN-DEKLKYIQKTGLSKGD--KMYKYVVTIMGISRLETIRQKVAN 305
             +    P  +  S  N  +K + +++ GL+K +   + K     +G S  E I + V  
Sbjct: 273 WAVFKKWPFSLKYSEKNIIQKFETLKRVGLTKEEVCLVVKKYPECVGTSE-EKIVKSVKT 332

Query: 306 LEKFGFTDDEIFALLGRSPLILTLSVDKVQRNMTFILCTLKLPAKVILSYPFLFYFNLDA 359
             + GFT DE+  ++ R P  + L+ D V++   F++ T+  P KV+ S P +  F+L+ 
Sbjct: 333 FLELGFTKDEVLMIIKRHPQCIGLAADSVKKKTEFLVKTMGWPLKVVASTPIVLGFSLEK 392

[Close]

BLAST of MS011392 vs. TAIR 10
Match: AT4G38160.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 50.8 bits (120), Expect = 2.8e-06
Identity = 61/304 (20.07%), Postives = 135/304 (44.41%), Query Frame = 0


Query: 67  FRRWGCTDNDIAKIFARGPSLLRSDLN-QLQNKLHLLKGLGITSPDLVKIINCRPRFLKC 126
           FR  G  D  I K+  +   L ++  +   +N  +L   +GI    L  I++  P+ L  
Sbjct: 13  FRDKGFDDPSIDKMLRKCKQLEKAQSDVASENWDYLSNIVGIQERKLPYIVSRCPKILTL 72

Query: 127 RINNNFHERIAFFLKIFESKEVLIKAIVRNPSLLTYDFHNRIKPVISLYEEMGLSKKDLI 186
           R++      +     +  +   +  AI + P +L++    ++ P+++ ++ +G+ +  L 
Sbjct: 73  RLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLG 132

Query: 187 LMLISRPSLIPRSSFNDEKL----KYIQKTGLSKGDKMYKYVVT---IMGISRLETIRQK 246
            M++  P LI  S   D KL     ++   GL +   + K +V    +MG S  + +R  
Sbjct: 133 KMILFNPRLISYSI--DTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPT 192

Query: 247 VANLE-KFGFTDDEIFALLGRSPLILTLSVDKVQR-NMTFIL-CTL--KLPAKVILSYPF 306
              L+   G ++D I +++   P +L   V+K+ + N  ++  C       A ++  YP 
Sbjct: 193 TEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQ 252

Query: 307 LFYFNLDAILKPRV-----LLSGKMEEMGLHLQIKGHAMLRALRMTEKRFLKTFVNSQPK 353
           +   ++   L+PR+     ++   M+E+  + +   H + + +    K   K  ++   +
Sbjct: 253 ILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLR 312

The following BLAST results are available for this feature:

BLAST of MS011392 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133358.1	3.6e-210	99.48	uncharacterized protein LOC111005954 [Momordica charantia]	[more]
XP_022158121.1	2.8e-202	95.01	uncharacterized protein LOC111024679 [Momordica charantia]	[more]
XP_038881817.1	1.8e-169	84.89	uncharacterized protein LOC120073205, partial [Benincasa hispida]	[more]
XP_022978595.1	2.9e-167	81.15	uncharacterized protein LOC111478530 isoform X2 [Cucurbita maxima]	[more]
XP_022978594.1	2.9e-167	81.15	uncharacterized protein LOC111478530 isoform X1 [Cucurbita maxima]	[more]

BLAST of MS011392 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9VPD5	1.4e-07	27.78	Transcription termination factor 3, mitochondrial OS=Drosophila melanogaster OX=...	[more]
Q9SZL6	3.9e-05	20.07	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
F4JVI3	1.1e-04	27.44	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q84X53	9.5e-04	33.33	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]

BLAST of MS011392 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYX5	1.8e-210	99.48	uncharacterized protein LOC111005954 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1E035	1.4e-202	95.01	uncharacterized protein LOC111024679 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1IQK9	1.4e-167	81.15	uncharacterized protein LOC111478530 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IUG6	1.4e-167	81.15	uncharacterized protein LOC111478530 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GFZ6	2.1e-163	79.58	uncharacterized protein LOC111453817 OS=Cucurbita moschata OX=3662 GN=LOC1114538...	[more]

BLAST of MS011392 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79220.1	5.2e-98	55.06	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	2.3e-13	23.43	Mitochondrial transcription termination factor family protein	[more]
AT1G61990.1	4.0e-13	22.59	Mitochondrial transcription termination factor family protein	[more]
AT5G23930.1	4.8e-11	23.25	Mitochondrial transcription termination factor family protein	[more]
AT4G38160.1	2.8e-06	20.07	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 253..284 e-value: 150.0 score: 10.3 coord: 78..108 e-value: 1.7 score: 17.7 coord: 285..319 e-value: 580.0 score: 5.7 coord: 217..248 e-value: 470.0 score: 6.5 coord: 113..145 e-value: 390.0 score: 7.1 coord: 149..180 e-value: 2.5E-4 score: 30.4
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 145..339 e-value: 2.0E-28 score: 99.2 coord: 66..193 e-value: 1.9E-23 score: 82.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 34..381
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 122..352 e-value: 1.1E-35 score: 125.1
None	No IPR available	PANTHER	PTHR13068:SF112	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN	coord: 34..381

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS011392.1	MS011392.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding